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	Fusion Gene Summary
	Fusion Gene ORF analysis
	Fusion Genomic Features
	Fusion Protein Features
	Fusion Gene Sequence
	Fusion Gene PPI analysis
	Related Drugs
	Related Diseases

Fusion gene:PDLIM5-PDLIM5 (FusionGDB2 ID:63595)

Fusion Gene Summary for PDLIM5-PDLIM5

Fusion gene summary

Fusion gene information	Fusion gene name: PDLIM5-PDLIM5
	Fusion gene ID: 63595
		Hgene	Tgene
	Gene symbol	PDLIM5	PDLIM5
	Gene ID	10611	10611
	Gene name	PDZ and LIM domain 5	PDZ and LIM domain 5
	Synonyms	ENH\|ENH1\|L9\|LIM	ENH\|ENH1\|L9\|LIM
	Cytomap	4q22.3	4q22.3
	Type of gene	protein-coding	protein-coding
	Description	PDZ and LIM domain protein 5enigma homologenigma-like LIM domain proteinenigma-like PDZ and LIM domains protein	PDZ and LIM domain protein 5enigma homologenigma-like LIM domain proteinenigma-like PDZ and LIM domains protein
	Modification date	20200313	20200313
	UniProtAcc	.	.
	Ensembl transtripts involved in fusion gene	ENST00000450793, ENST00000538141, ENST00000380180, ENST00000318007, ENST00000437932, ENST00000317968, ENST00000542407, ENST00000508216, ENST00000514743, ENST00000380176, ENST00000359265, ENST00000512274, ENST00000504489,	ENST00000450793, ENST00000538141, ENST00000380180, ENST00000318007, ENST00000437932, ENST00000317968, ENST00000542407, ENST00000508216, ENST00000514743, ENST00000380176, ENST00000359265, ENST00000512274, ENST00000504489,
Fusion gene scores	* DoF score	20 X 18 X 9=3240	15 X 18 X 7=1890
	# samples	23	21
	** MAII score	log2(23/3240*10)=-3.81628804682761 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0	log2(21/1890*10)=-3.16992500144231 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0
Context	PubMed: PDLIM5 [Title/Abstract] AND PDLIM5 [Title/Abstract] AND fusion [Title/Abstract]
Most frequent breakpoint	PDLIM5(95583689)-PDLIM5(95585185), # samples:1 PDLIM5(95507595)-PDLIM5(95494502), # samples:1 PDLIM5(95497504)-PDLIM5(95497292), # samples:1
Anticipated loss of major functional domain due to fusion event.

* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Partner

Gene

GO ID

GO term

PubMed ID

Fusion gene breakpoints across PDLIM5 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

Fusion gene breakpoints across PDLIM5 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

Source	Disease	Sample	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
ChiTaRS5.0	N/A	AA568207	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
ChiTaRS5.0	N/A	BF820649	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
ChiTaRS5.0	N/A	BF912578	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-

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Fusion Gene ORF analysis for PDLIM5-PDLIM5

Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

ORF	Henst	Tenst	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
intron-intron	ENST00000450793	ENST00000450793	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000450793	ENST00000538141	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000450793	ENST00000380180	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000450793	ENST00000318007	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000450793	ENST00000437932	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000450793	ENST00000317968	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000450793	ENST00000542407	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000450793	ENST00000508216	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000450793	ENST00000514743	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-3UTR	ENST00000450793	ENST00000380176	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000450793	ENST00000359265	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000450793	ENST00000512274	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000450793	ENST00000504489	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000538141	ENST00000450793	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000538141	ENST00000538141	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000538141	ENST00000380180	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000538141	ENST00000318007	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000538141	ENST00000437932	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000538141	ENST00000317968	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000538141	ENST00000542407	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000538141	ENST00000508216	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000538141	ENST00000514743	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-3UTR	ENST00000538141	ENST00000380176	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000538141	ENST00000359265	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000538141	ENST00000512274	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000538141	ENST00000504489	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000380180	ENST00000450793	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000380180	ENST00000538141	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000380180	ENST00000380180	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000380180	ENST00000318007	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000380180	ENST00000437932	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000380180	ENST00000317968	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000380180	ENST00000542407	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000380180	ENST00000508216	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000380180	ENST00000514743	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-3UTR	ENST00000380180	ENST00000380176	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000380180	ENST00000359265	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000380180	ENST00000512274	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000380180	ENST00000504489	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000318007	ENST00000450793	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000318007	ENST00000538141	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000318007	ENST00000380180	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000318007	ENST00000318007	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000318007	ENST00000437932	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000318007	ENST00000317968	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000318007	ENST00000542407	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000318007	ENST00000508216	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000318007	ENST00000514743	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-3UTR	ENST00000318007	ENST00000380176	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000318007	ENST00000359265	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000318007	ENST00000512274	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000318007	ENST00000504489	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000437932	ENST00000450793	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000437932	ENST00000538141	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000437932	ENST00000380180	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000437932	ENST00000318007	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000437932	ENST00000437932	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000437932	ENST00000317968	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000437932	ENST00000542407	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000437932	ENST00000508216	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000437932	ENST00000514743	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-3UTR	ENST00000437932	ENST00000380176	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000437932	ENST00000359265	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000437932	ENST00000512274	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000437932	ENST00000504489	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000317968	ENST00000450793	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000317968	ENST00000538141	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000317968	ENST00000380180	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000317968	ENST00000318007	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000317968	ENST00000437932	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000317968	ENST00000317968	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000317968	ENST00000542407	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000317968	ENST00000508216	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000317968	ENST00000514743	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-3UTR	ENST00000317968	ENST00000380176	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000317968	ENST00000359265	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000317968	ENST00000512274	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000317968	ENST00000504489	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000542407	ENST00000450793	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000542407	ENST00000538141	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000542407	ENST00000380180	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000542407	ENST00000318007	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000542407	ENST00000437932	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000542407	ENST00000317968	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000542407	ENST00000542407	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000542407	ENST00000508216	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000542407	ENST00000514743	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-3UTR	ENST00000542407	ENST00000380176	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000542407	ENST00000359265	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000542407	ENST00000512274	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000542407	ENST00000504489	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000508216	ENST00000450793	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000508216	ENST00000538141	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000508216	ENST00000380180	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000508216	ENST00000318007	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000508216	ENST00000437932	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000508216	ENST00000317968	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000508216	ENST00000542407	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000508216	ENST00000508216	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000508216	ENST00000514743	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-3UTR	ENST00000508216	ENST00000380176	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000508216	ENST00000359265	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000508216	ENST00000512274	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000508216	ENST00000504489	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000514743	ENST00000450793	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000514743	ENST00000538141	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000514743	ENST00000380180	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000514743	ENST00000318007	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000514743	ENST00000437932	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000514743	ENST00000317968	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000514743	ENST00000542407	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000514743	ENST00000508216	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000514743	ENST00000514743	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-3UTR	ENST00000514743	ENST00000380176	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000514743	ENST00000359265	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000514743	ENST00000512274	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
5CDS-intron	ENST00000514743	ENST00000504489	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
3UTR-intron	ENST00000380176	ENST00000450793	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
3UTR-intron	ENST00000380176	ENST00000538141	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
3UTR-intron	ENST00000380176	ENST00000380180	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
3UTR-intron	ENST00000380176	ENST00000318007	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
3UTR-intron	ENST00000380176	ENST00000437932	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
3UTR-intron	ENST00000380176	ENST00000317968	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
3UTR-intron	ENST00000380176	ENST00000542407	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
3UTR-intron	ENST00000380176	ENST00000508216	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
3UTR-intron	ENST00000380176	ENST00000514743	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
3UTR-3UTR	ENST00000380176	ENST00000380176	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
3UTR-intron	ENST00000380176	ENST00000359265	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
3UTR-intron	ENST00000380176	ENST00000512274	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
3UTR-intron	ENST00000380176	ENST00000504489	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000359265	ENST00000450793	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000359265	ENST00000538141	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000359265	ENST00000380180	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000359265	ENST00000318007	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000359265	ENST00000437932	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000359265	ENST00000317968	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000359265	ENST00000542407	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000359265	ENST00000508216	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000359265	ENST00000514743	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-3UTR	ENST00000359265	ENST00000380176	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000359265	ENST00000359265	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000359265	ENST00000512274	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000359265	ENST00000504489	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000512274	ENST00000450793	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000512274	ENST00000538141	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000512274	ENST00000380180	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000512274	ENST00000318007	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000512274	ENST00000437932	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000512274	ENST00000317968	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000512274	ENST00000542407	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000512274	ENST00000508216	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000512274	ENST00000514743	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-3UTR	ENST00000512274	ENST00000380176	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000512274	ENST00000359265	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000512274	ENST00000512274	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000512274	ENST00000504489	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000504489	ENST00000450793	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000504489	ENST00000538141	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000504489	ENST00000380180	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000504489	ENST00000318007	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000504489	ENST00000437932	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000504489	ENST00000317968	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000504489	ENST00000542407	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000504489	ENST00000508216	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000504489	ENST00000514743	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-3UTR	ENST00000504489	ENST00000380176	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000504489	ENST00000359265	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000504489	ENST00000512274	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
intron-intron	ENST00000504489	ENST00000504489	PDLIM5	chr4	95583689	+	PDLIM5	chr4	95585185	-
In-frame	ENST00000450793	ENST00000450793	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000450793	ENST00000538141	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000450793	ENST00000380180	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000450793	ENST00000318007	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000450793	ENST00000437932	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000450793	ENST00000317968	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000450793	ENST00000542407	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000450793	ENST00000508216	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000450793	ENST00000514743	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000450793	ENST00000380176	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000450793	ENST00000359265	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000450793	ENST00000512274	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000450793	ENST00000504489	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000538141	ENST00000450793	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000538141	ENST00000538141	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000538141	ENST00000380180	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000538141	ENST00000318007	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000538141	ENST00000437932	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000538141	ENST00000317968	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000538141	ENST00000542407	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000538141	ENST00000508216	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000538141	ENST00000514743	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000538141	ENST00000380176	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000538141	ENST00000359265	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000538141	ENST00000512274	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000538141	ENST00000504489	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000380180	ENST00000450793	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000380180	ENST00000538141	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000380180	ENST00000380180	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000380180	ENST00000318007	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000380180	ENST00000437932	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000380180	ENST00000317968	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000380180	ENST00000542407	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000380180	ENST00000508216	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000380180	ENST00000514743	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000380180	ENST00000380176	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000380180	ENST00000359265	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000380180	ENST00000512274	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000380180	ENST00000504489	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000318007	ENST00000450793	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000318007	ENST00000538141	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000318007	ENST00000380180	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000318007	ENST00000318007	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000318007	ENST00000437932	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000318007	ENST00000317968	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000318007	ENST00000542407	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000318007	ENST00000508216	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000318007	ENST00000514743	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000318007	ENST00000380176	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000318007	ENST00000359265	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000318007	ENST00000512274	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000318007	ENST00000504489	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000437932	ENST00000450793	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000437932	ENST00000538141	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000437932	ENST00000380180	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000437932	ENST00000318007	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000437932	ENST00000437932	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000437932	ENST00000317968	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000437932	ENST00000542407	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000437932	ENST00000508216	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000437932	ENST00000514743	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000437932	ENST00000380176	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000437932	ENST00000359265	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000437932	ENST00000512274	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000437932	ENST00000504489	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000317968	ENST00000450793	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000317968	ENST00000538141	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000317968	ENST00000380180	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000317968	ENST00000318007	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000317968	ENST00000437932	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000317968	ENST00000317968	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000317968	ENST00000542407	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000317968	ENST00000508216	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000317968	ENST00000514743	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000317968	ENST00000380176	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000317968	ENST00000359265	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000317968	ENST00000512274	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000317968	ENST00000504489	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000542407	ENST00000450793	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000542407	ENST00000538141	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000542407	ENST00000380180	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000542407	ENST00000318007	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000542407	ENST00000437932	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000542407	ENST00000317968	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000542407	ENST00000542407	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000542407	ENST00000508216	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000542407	ENST00000514743	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000542407	ENST00000380176	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000542407	ENST00000359265	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000542407	ENST00000512274	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000542407	ENST00000504489	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000508216	ENST00000450793	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000508216	ENST00000538141	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000508216	ENST00000380180	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000508216	ENST00000318007	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000508216	ENST00000437932	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000508216	ENST00000317968	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000508216	ENST00000542407	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000508216	ENST00000508216	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000508216	ENST00000514743	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000508216	ENST00000380176	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000508216	ENST00000359265	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000508216	ENST00000512274	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000508216	ENST00000504489	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000514743	ENST00000450793	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000514743	ENST00000538141	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000514743	ENST00000380180	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000514743	ENST00000318007	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000514743	ENST00000437932	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
In-frame	ENST00000514743	ENST00000317968	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000514743	ENST00000542407	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000514743	ENST00000508216	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-5UTR	ENST00000514743	ENST00000514743	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000514743	ENST00000380176	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000514743	ENST00000359265	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000514743	ENST00000512274	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
5CDS-intron	ENST00000514743	ENST00000504489	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
3UTR-3CDS	ENST00000380176	ENST00000450793	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
3UTR-3CDS	ENST00000380176	ENST00000538141	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
3UTR-3CDS	ENST00000380176	ENST00000380180	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
3UTR-3CDS	ENST00000380176	ENST00000318007	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
3UTR-3CDS	ENST00000380176	ENST00000437932	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
3UTR-3CDS	ENST00000380176	ENST00000317968	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
3UTR-5UTR	ENST00000380176	ENST00000542407	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
3UTR-5UTR	ENST00000380176	ENST00000508216	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
3UTR-5UTR	ENST00000380176	ENST00000514743	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
3UTR-intron	ENST00000380176	ENST00000380176	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
3UTR-intron	ENST00000380176	ENST00000359265	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
3UTR-intron	ENST00000380176	ENST00000512274	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
3UTR-intron	ENST00000380176	ENST00000504489	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000359265	ENST00000450793	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000359265	ENST00000538141	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000359265	ENST00000380180	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000359265	ENST00000318007	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000359265	ENST00000437932	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000359265	ENST00000317968	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-5UTR	ENST00000359265	ENST00000542407	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-5UTR	ENST00000359265	ENST00000508216	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-5UTR	ENST00000359265	ENST00000514743	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-intron	ENST00000359265	ENST00000380176	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-intron	ENST00000359265	ENST00000359265	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-intron	ENST00000359265	ENST00000512274	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-intron	ENST00000359265	ENST00000504489	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000512274	ENST00000450793	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000512274	ENST00000538141	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000512274	ENST00000380180	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000512274	ENST00000318007	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000512274	ENST00000437932	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000512274	ENST00000317968	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-5UTR	ENST00000512274	ENST00000542407	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-5UTR	ENST00000512274	ENST00000508216	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-5UTR	ENST00000512274	ENST00000514743	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-intron	ENST00000512274	ENST00000380176	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-intron	ENST00000512274	ENST00000359265	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-intron	ENST00000512274	ENST00000512274	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-intron	ENST00000512274	ENST00000504489	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000504489	ENST00000450793	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000504489	ENST00000538141	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000504489	ENST00000380180	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000504489	ENST00000318007	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000504489	ENST00000437932	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-3CDS	ENST00000504489	ENST00000317968	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-5UTR	ENST00000504489	ENST00000542407	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-5UTR	ENST00000504489	ENST00000508216	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-5UTR	ENST00000504489	ENST00000514743	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-intron	ENST00000504489	ENST00000380176	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-intron	ENST00000504489	ENST00000359265	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-intron	ENST00000504489	ENST00000512274	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-intron	ENST00000504489	ENST00000504489	PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494502	+
intron-intron	ENST00000450793	ENST00000450793	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000450793	ENST00000538141	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000450793	ENST00000380180	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000450793	ENST00000318007	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000450793	ENST00000437932	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000450793	ENST00000317968	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000450793	ENST00000542407	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000450793	ENST00000508216	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000450793	ENST00000514743	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000450793	ENST00000380176	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000450793	ENST00000359265	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000450793	ENST00000512274	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000450793	ENST00000504489	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000538141	ENST00000450793	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000538141	ENST00000538141	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000538141	ENST00000380180	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000538141	ENST00000318007	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000538141	ENST00000437932	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000538141	ENST00000317968	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000538141	ENST00000542407	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000538141	ENST00000508216	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000538141	ENST00000514743	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000538141	ENST00000380176	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000538141	ENST00000359265	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000538141	ENST00000512274	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000538141	ENST00000504489	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380180	ENST00000450793	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380180	ENST00000538141	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380180	ENST00000380180	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380180	ENST00000318007	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380180	ENST00000437932	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380180	ENST00000317968	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380180	ENST00000542407	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380180	ENST00000508216	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380180	ENST00000514743	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380180	ENST00000380176	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380180	ENST00000359265	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380180	ENST00000512274	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380180	ENST00000504489	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000318007	ENST00000450793	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000318007	ENST00000538141	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000318007	ENST00000380180	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000318007	ENST00000318007	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000318007	ENST00000437932	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000318007	ENST00000317968	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000318007	ENST00000542407	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000318007	ENST00000508216	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000318007	ENST00000514743	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000318007	ENST00000380176	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000318007	ENST00000359265	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000318007	ENST00000512274	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000318007	ENST00000504489	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000437932	ENST00000450793	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000437932	ENST00000538141	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000437932	ENST00000380180	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000437932	ENST00000318007	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000437932	ENST00000437932	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000437932	ENST00000317968	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000437932	ENST00000542407	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000437932	ENST00000508216	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000437932	ENST00000514743	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000437932	ENST00000380176	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000437932	ENST00000359265	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000437932	ENST00000512274	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000437932	ENST00000504489	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000317968	ENST00000450793	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000317968	ENST00000538141	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000317968	ENST00000380180	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000317968	ENST00000318007	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000317968	ENST00000437932	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000317968	ENST00000317968	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000317968	ENST00000542407	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000317968	ENST00000508216	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000317968	ENST00000514743	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000317968	ENST00000380176	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000317968	ENST00000359265	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000317968	ENST00000512274	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000317968	ENST00000504489	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000542407	ENST00000450793	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000542407	ENST00000538141	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000542407	ENST00000380180	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000542407	ENST00000318007	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000542407	ENST00000437932	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000542407	ENST00000317968	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000542407	ENST00000542407	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000542407	ENST00000508216	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000542407	ENST00000514743	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000542407	ENST00000380176	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000542407	ENST00000359265	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000542407	ENST00000512274	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000542407	ENST00000504489	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000508216	ENST00000450793	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000508216	ENST00000538141	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000508216	ENST00000380180	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000508216	ENST00000318007	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000508216	ENST00000437932	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000508216	ENST00000317968	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000508216	ENST00000542407	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000508216	ENST00000508216	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000508216	ENST00000514743	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000508216	ENST00000380176	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000508216	ENST00000359265	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000508216	ENST00000512274	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000508216	ENST00000504489	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000514743	ENST00000450793	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000514743	ENST00000538141	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000514743	ENST00000380180	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000514743	ENST00000318007	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000514743	ENST00000437932	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000514743	ENST00000317968	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000514743	ENST00000542407	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000514743	ENST00000508216	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000514743	ENST00000514743	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000514743	ENST00000380176	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000514743	ENST00000359265	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000514743	ENST00000512274	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000514743	ENST00000504489	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380176	ENST00000450793	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380176	ENST00000538141	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380176	ENST00000380180	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380176	ENST00000318007	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380176	ENST00000437932	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380176	ENST00000317968	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380176	ENST00000542407	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380176	ENST00000508216	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380176	ENST00000514743	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380176	ENST00000380176	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380176	ENST00000359265	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380176	ENST00000512274	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000380176	ENST00000504489	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000359265	ENST00000450793	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000359265	ENST00000538141	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000359265	ENST00000380180	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000359265	ENST00000318007	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000359265	ENST00000437932	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000359265	ENST00000317968	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000359265	ENST00000542407	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000359265	ENST00000508216	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000359265	ENST00000514743	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000359265	ENST00000380176	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000359265	ENST00000359265	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000359265	ENST00000512274	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000359265	ENST00000504489	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000512274	ENST00000450793	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000512274	ENST00000538141	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000512274	ENST00000380180	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000512274	ENST00000318007	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000512274	ENST00000437932	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000512274	ENST00000317968	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000512274	ENST00000542407	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000512274	ENST00000508216	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000512274	ENST00000514743	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000512274	ENST00000380176	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000512274	ENST00000359265	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000512274	ENST00000512274	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000512274	ENST00000504489	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000504489	ENST00000450793	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000504489	ENST00000538141	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000504489	ENST00000380180	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000504489	ENST00000318007	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000504489	ENST00000437932	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000504489	ENST00000317968	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000504489	ENST00000542407	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000504489	ENST00000508216	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000504489	ENST00000514743	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000504489	ENST00000380176	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000504489	ENST00000359265	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000504489	ENST00000512274	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-
intron-intron	ENST00000504489	ENST00000504489	PDLIM5	chr4	95497504	+	PDLIM5	chr4	95497292	-

ORFfinder result based on the fusion transcript sequence of in-frame fusion genes.

Henst

Tenst

Hgene

Hchr

Hbp

Hstrand

Tgene

Tchr

Tbp

Tstrand

Seq length
(transcript)

BP loci
(transcript)

Predicted start
(transcript)

Predicted stop
(transcript)

Seq length
(amino acids)

DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.

Henst

Tenst

Hgene

Hchr

Hbp

Hstrand

Tgene

Tchr

Tbp

Tstrand

No-coding score

Coding score

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Fusion Genomic Features for PDLIM5-PDLIM5

FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.

Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand	1-p	p (fusion gene breakpoint)
PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494501	+	0.3450204	0.6549796
PDLIM5	chr4	95507595	+	PDLIM5	chr4	95494501	+	0.3450204	0.6549796

Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for PDLIM5-PDLIM5

Go to
FGviewer for the breakpoints of chr4:95507595-chr4:95494502
.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.

Main function of each fusion partner protein. (from UniProt)

Hgene	Tgene
.	.
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.	FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.

Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at
download page

* Minus value of BPloci means that the break pointn is located before the CDS.

- In-frame and retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000317968

2_85

306.6666666666667

597.0

Domain

PDZ

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000318007

2_85

183.66666666666666

215.0

Domain

PDZ

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000380180

2_85

203.66666666666666

235.0

Domain

PDZ

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000437932

2_85

197.66666666666666

488.0

Domain

PDZ

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000508216

2_85

203.66666666666666

235.0

Domain

PDZ

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000317968

418_477

82.66666666666667

597.0

Domain

LIM zinc-binding 1

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000317968

477_536

82.66666666666667

597.0

Domain

LIM zinc-binding 2

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000317968

536_596

82.66666666666667

597.0

Domain

LIM zinc-binding 3

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000318007

418_477

82.66666666666667

215.0

Domain

LIM zinc-binding 1

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000318007

477_536

82.66666666666667

215.0

Domain

LIM zinc-binding 2

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000318007

536_596

82.66666666666667

215.0

Domain

LIM zinc-binding 3

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000359265

2_85

137.0

Domain

PDZ

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000359265

418_477

137.0

Domain

LIM zinc-binding 1

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000359265

477_536

137.0

Domain

LIM zinc-binding 2

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000359265

536_596

137.0

Domain

LIM zinc-binding 3

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000380180

418_477

82.66666666666667

235.0

Domain

LIM zinc-binding 1

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000380180

477_536

82.66666666666667

235.0

Domain

LIM zinc-binding 2

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000380180

536_596

82.66666666666667

235.0

Domain

LIM zinc-binding 3

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000437932

418_477

82.66666666666667

488.0

Domain

LIM zinc-binding 1

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000437932

477_536

82.66666666666667

488.0

Domain

LIM zinc-binding 2

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000437932

536_596

82.66666666666667

488.0

Domain

LIM zinc-binding 3

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000508216

418_477

82.66666666666667

235.0

Domain

LIM zinc-binding 1

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000508216

477_536

82.66666666666667

235.0

Domain

LIM zinc-binding 2

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000508216

536_596

82.66666666666667

235.0

Domain

LIM zinc-binding 3

- In-frame and not-retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000317968

418_477

306.6666666666667

597.0

Domain

LIM zinc-binding 1

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000317968

477_536

306.6666666666667

597.0

Domain

LIM zinc-binding 2

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000317968

536_596

306.6666666666667

597.0

Domain

LIM zinc-binding 3

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000318007

418_477

183.66666666666666

215.0

Domain

LIM zinc-binding 1

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000318007

477_536

183.66666666666666

215.0

Domain

LIM zinc-binding 2

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000318007

536_596

183.66666666666666

215.0

Domain

LIM zinc-binding 3

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000359265

2_85

137.0

Domain

PDZ

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000359265

418_477

137.0

Domain

LIM zinc-binding 1

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000359265

477_536

137.0

Domain

LIM zinc-binding 2

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000359265

536_596

137.0

Domain

LIM zinc-binding 3

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000380180

418_477

203.66666666666666

235.0

Domain

LIM zinc-binding 1

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000380180

477_536

203.66666666666666

235.0

Domain

LIM zinc-binding 2

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000380180

536_596

203.66666666666666

235.0

Domain

LIM zinc-binding 3

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000437932

418_477

197.66666666666666

488.0

Domain

LIM zinc-binding 1

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000437932

477_536

197.66666666666666

488.0

Domain

LIM zinc-binding 2

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000437932

536_596

197.66666666666666

488.0

Domain

LIM zinc-binding 3

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000508216

418_477

203.66666666666666

235.0

Domain

LIM zinc-binding 1

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000508216

477_536

203.66666666666666

235.0

Domain

LIM zinc-binding 2

Hgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000508216

536_596

203.66666666666666

235.0

Domain

LIM zinc-binding 3

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000317968

2_85

82.66666666666667

597.0

Domain

PDZ

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000318007

2_85

82.66666666666667

215.0

Domain

PDZ

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000380180

2_85

82.66666666666667

235.0

Domain

PDZ

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000437932

2_85

82.66666666666667

488.0

Domain

PDZ

Tgene

PDLIM5

chr4:95507595

chr4:95494502

ENST00000508216

2_85

82.66666666666667

235.0

Domain

PDZ

Top

Fusion Gene Sequence for PDLIM5-PDLIM5

For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.

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Fusion Gene PPI Analysis for PDLIM5-PDLIM5

Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in
ChiPPI page.

Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)

Hgene

Hgene's interactors

Tgene

Tgene's interactors

- Retained PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Still interaction with

- Lost PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

- Retained PPIs, but lost function due to frame-shift fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

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Related Drugs for PDLIM5-PDLIM5

Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)

Partner

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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Related Diseases for PDLIM5-PDLIM5

Diseases associated with fusion partners.
(DisGeNet 4.0)

Partner	Gene	Disease ID	Disease name	# pubmeds	Source
Hgene	PDLIM5	C0005586	Bipolar Disorder	5	PSYGENET
Hgene	PDLIM5	C0036341	Schizophrenia	4	PSYGENET
Hgene	PDLIM5	C0041696	Unipolar Depression	4	PSYGENET
Hgene	PDLIM5	C1269683	Major Depressive Disorder	4	PSYGENET
Hgene	PDLIM5	C0019193	Hepatitis, Toxic	1	CTD_human
Hgene	PDLIM5	C0151744	Myocardial Ischemia	1	CTD_human
Hgene	PDLIM5	C0860207	Drug-Induced Liver Disease	1	CTD_human
Hgene	PDLIM5	C1262760	Hepatitis, Drug-Induced	1	CTD_human
Hgene	PDLIM5	C3658290	Drug-Induced Acute Liver Injury	1	CTD_human
Hgene	PDLIM5	C4277682	Chemical and Drug Induced Liver Injury	1	CTD_human
Hgene	PDLIM5	C4279912	Chemically-Induced Liver Toxicity	1	CTD_human
Tgene	PDLIM5	C0005586	Bipolar Disorder	5	PSYGENET
Tgene	PDLIM5	C0036341	Schizophrenia	4	PSYGENET
Tgene	PDLIM5	C0041696	Unipolar Depression	4	PSYGENET
Tgene	PDLIM5	C1269683	Major Depressive Disorder	4	PSYGENET
Tgene	PDLIM5	C0019193	Hepatitis, Toxic	1	CTD_human
Tgene	PDLIM5	C0151744	Myocardial Ischemia	1	CTD_human
Tgene	PDLIM5	C0860207	Drug-Induced Liver Disease	1	CTD_human
Tgene	PDLIM5	C1262760	Hepatitis, Drug-Induced	1	CTD_human
Tgene	PDLIM5	C3658290	Drug-Induced Acute Liver Injury	1	CTD_human
Tgene	PDLIM5	C4277682	Chemical and Drug Induced Liver Injury	1	CTD_human
Tgene	PDLIM5	C4279912	Chemically-Induced Liver Toxicity	1	CTD_human