FusionGDB Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
leaf

Fusion Gene Summary

leaf

Fusion Gene ORF analysis

leaf

Fusion Genomic Features

leaf

Fusion Protein Features

leaf

Fusion Gene Sequence

leaf

Fusion Gene PPI analysis

leaf

Related Drugs

leaf

Related Diseases

Fusion gene:PDXDC1-LMF1 (FusionGDB2 ID:63693)

Fusion Gene Summary for PDXDC1-LMF1

check button Fusion gene summary
Fusion gene informationFusion gene name: PDXDC1-LMF1
Fusion gene ID: 63693
HgeneTgene
Gene symbol

PDXDC1

LMF1

Gene ID

23042

64788

Gene namepyridoxal dependent decarboxylase domain containing 1lipase maturation factor 1
SynonymsLP8165C16orf26|HMFN1876|JFP11|TMEM112|TMEM112A
Cytomap

16p13.11

16p13.3

Type of geneprotein-codingprotein-coding
Descriptionpyridoxal-dependent decarboxylase domain-containing protein 1lipase maturation factor 1transmembrane protein 112
Modification date2020031320200313
UniProtAcc.

Q96S06

Ensembl transtripts involved in fusion geneENST00000563679, ENST00000325823, 
ENST00000447912, ENST00000535621, 
ENST00000455313, ENST00000396410, 
ENST00000569715, ENST00000450288, 
ENST00000262301, ENST00000399843, 
ENST00000543238, ENST00000568897, 
ENST00000568268, ENST00000539379, 
Fusion gene scores* DoF score24 X 21 X 12=60488 X 6 X 5=240
# samples 277
** MAII scorelog2(27/6048*10)=-4.48542682717024
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(7/240*10)=-1.77760757866355
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: PDXDC1 [Title/Abstract] AND LMF1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointPDXDC1(15102704)-LMF1(943072), # samples:3
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across PDXDC1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across LMF1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4BRCATCGA-AN-A046-01APDXDC1chr16

15102704

+LMF1chr16

943072

-
ChimerDB4BRCATCGA-AN-A046-01APDXDC1chr16

15102704

+LMF1chr16

943072

-
ChimerDB4BRCATCGA-AN-A046-01APDXDC1chr16

15102704

-LMF1chr16

943072

-


Top

Fusion Gene ORF analysis for PDXDC1-LMF1

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000563679ENST00000262301PDXDC1chr16

15102704

+LMF1chr16

943072

-
In-frameENST00000563679ENST00000399843PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-5UTRENST00000563679ENST00000543238PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-5UTRENST00000563679ENST00000568897PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-intronENST00000563679ENST00000568268PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-3UTRENST00000563679ENST00000539379PDXDC1chr16

15102704

+LMF1chr16

943072

-
In-frameENST00000325823ENST00000262301PDXDC1chr16

15102704

+LMF1chr16

943072

-
In-frameENST00000325823ENST00000399843PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-5UTRENST00000325823ENST00000543238PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-5UTRENST00000325823ENST00000568897PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-intronENST00000325823ENST00000568268PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-3UTRENST00000325823ENST00000539379PDXDC1chr16

15102704

+LMF1chr16

943072

-
In-frameENST00000447912ENST00000262301PDXDC1chr16

15102704

+LMF1chr16

943072

-
In-frameENST00000447912ENST00000399843PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-5UTRENST00000447912ENST00000543238PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-5UTRENST00000447912ENST00000568897PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-intronENST00000447912ENST00000568268PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-3UTRENST00000447912ENST00000539379PDXDC1chr16

15102704

+LMF1chr16

943072

-
In-frameENST00000535621ENST00000262301PDXDC1chr16

15102704

+LMF1chr16

943072

-
In-frameENST00000535621ENST00000399843PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-5UTRENST00000535621ENST00000543238PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-5UTRENST00000535621ENST00000568897PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-intronENST00000535621ENST00000568268PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-3UTRENST00000535621ENST00000539379PDXDC1chr16

15102704

+LMF1chr16

943072

-
intron-3CDSENST00000455313ENST00000262301PDXDC1chr16

15102704

+LMF1chr16

943072

-
intron-3CDSENST00000455313ENST00000399843PDXDC1chr16

15102704

+LMF1chr16

943072

-
intron-5UTRENST00000455313ENST00000543238PDXDC1chr16

15102704

+LMF1chr16

943072

-
intron-5UTRENST00000455313ENST00000568897PDXDC1chr16

15102704

+LMF1chr16

943072

-
intron-intronENST00000455313ENST00000568268PDXDC1chr16

15102704

+LMF1chr16

943072

-
intron-3UTRENST00000455313ENST00000539379PDXDC1chr16

15102704

+LMF1chr16

943072

-
In-frameENST00000396410ENST00000262301PDXDC1chr16

15102704

+LMF1chr16

943072

-
In-frameENST00000396410ENST00000399843PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-5UTRENST00000396410ENST00000543238PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-5UTRENST00000396410ENST00000568897PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-intronENST00000396410ENST00000568268PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-3UTRENST00000396410ENST00000539379PDXDC1chr16

15102704

+LMF1chr16

943072

-
In-frameENST00000569715ENST00000262301PDXDC1chr16

15102704

+LMF1chr16

943072

-
In-frameENST00000569715ENST00000399843PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-5UTRENST00000569715ENST00000543238PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-5UTRENST00000569715ENST00000568897PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-intronENST00000569715ENST00000568268PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-3UTRENST00000569715ENST00000539379PDXDC1chr16

15102704

+LMF1chr16

943072

-
In-frameENST00000450288ENST00000262301PDXDC1chr16

15102704

+LMF1chr16

943072

-
In-frameENST00000450288ENST00000399843PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-5UTRENST00000450288ENST00000543238PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-5UTRENST00000450288ENST00000568897PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-intronENST00000450288ENST00000568268PDXDC1chr16

15102704

+LMF1chr16

943072

-
5CDS-3UTRENST00000450288ENST00000539379PDXDC1chr16

15102704

+LMF1chr16

943072

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000563679PDXDC1chr1615102704+ENST00000262301LMF1chr16943072-27808411091881590
ENST00000563679PDXDC1chr1615102704+ENST00000399843LMF1chr16943072-27768411091881590
ENST00000325823PDXDC1chr1615102704+ENST00000262301LMF1chr16943072-2629690871730547
ENST00000325823PDXDC1chr1615102704+ENST00000399843LMF1chr16943072-2625690871730547
ENST00000447912PDXDC1chr1615102704+ENST00000262301LMF1chr16943072-26346952661735489
ENST00000447912PDXDC1chr1615102704+ENST00000399843LMF1chr16943072-26306952661735489
ENST00000535621PDXDC1chr1615102704+ENST00000262301LMF1chr16943072-2775836501876608
ENST00000535621PDXDC1chr1615102704+ENST00000399843LMF1chr16943072-2771836501876608
ENST00000396410PDXDC1chr1615102704+ENST00000262301LMF1chr16943072-2684745971785562
ENST00000396410PDXDC1chr1615102704+ENST00000399843LMF1chr16943072-2680745971785562
ENST00000569715PDXDC1chr1615102704+ENST00000262301LMF1chr16943072-2583644771684535
ENST00000569715PDXDC1chr1615102704+ENST00000399843LMF1chr16943072-2579644771684535
ENST00000450288PDXDC1chr1615102704+ENST00000262301LMF1chr16943072-2574635711675534
ENST00000450288PDXDC1chr1615102704+ENST00000399843LMF1chr16943072-2570635711675534

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000563679ENST00000262301PDXDC1chr1615102704+LMF1chr16943072-0.0247154980.97528446
ENST00000563679ENST00000399843PDXDC1chr1615102704+LMF1chr16943072-0.0252596460.9747404
ENST00000325823ENST00000262301PDXDC1chr1615102704+LMF1chr16943072-0.0296726250.9703273
ENST00000325823ENST00000399843PDXDC1chr1615102704+LMF1chr16943072-0.0301759220.9698241
ENST00000447912ENST00000262301PDXDC1chr1615102704+LMF1chr16943072-0.0507951570.9492048
ENST00000447912ENST00000399843PDXDC1chr1615102704+LMF1chr16943072-0.051201640.94879836
ENST00000535621ENST00000262301PDXDC1chr1615102704+LMF1chr16943072-0.0301739010.9698261
ENST00000535621ENST00000399843PDXDC1chr1615102704+LMF1chr16943072-0.0304755270.9695245
ENST00000396410ENST00000262301PDXDC1chr1615102704+LMF1chr16943072-0.027634160.97236586
ENST00000396410ENST00000399843PDXDC1chr1615102704+LMF1chr16943072-0.0279285220.9720714
ENST00000569715ENST00000262301PDXDC1chr1615102704+LMF1chr16943072-0.0282111350.9717889
ENST00000569715ENST00000399843PDXDC1chr1615102704+LMF1chr16943072-0.0288178380.9711821
ENST00000450288ENST00000262301PDXDC1chr1615102704+LMF1chr16943072-0.024478550.9755214
ENST00000450288ENST00000399843PDXDC1chr1615102704+LMF1chr16943072-0.0250435970.97495645

Top

Fusion Genomic Features for PDXDC1-LMF1


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

Top

Fusion Protein Features for PDXDC1-LMF1


check button Go to

FGviewer for the breakpoints of chr16:15102704-chr16:943072

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.LMF1

Q96S06

FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Involved in the maturation of specific proteins in the endoplasmic reticulum. Required for maturation and transport of active lipoprotein lipase (LPL) through the secretory pathway. Each LMF1 molecule chaperones 50 or more molecules of LPL. {ECO:0000250|UniProtKB:Q3U3R4, ECO:0000269|PubMed:24909692}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneLMF1chr16:15102704chr16:943072ENST00000262301311222_292221.0568.0Topological domainLumenal
TgeneLMF1chr16:15102704chr16:943072ENST00000262301311322_367221.0568.0Topological domainCytoplasmic
TgeneLMF1chr16:15102704chr16:943072ENST00000262301311389_567221.0568.0Topological domainLumenal
TgeneLMF1chr16:15102704chr16:943072ENST00000262301311293_321221.0568.0TransmembraneHelical
TgeneLMF1chr16:15102704chr16:943072ENST00000262301311368_388221.0568.0TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneLMF1chr16:15102704chr16:943072ENST00000262301311152_207221.0568.0Topological domainCytoplasmic
TgeneLMF1chr16:15102704chr16:943072ENST000002623013111_49221.0568.0Topological domainCytoplasmic
TgeneLMF1chr16:15102704chr16:943072ENST0000026230131173_127221.0568.0Topological domainLumenal
TgeneLMF1chr16:15102704chr16:943072ENST00000262301311128_151221.0568.0TransmembraneHelical
TgeneLMF1chr16:15102704chr16:943072ENST00000262301311208_221221.0568.0TransmembraneHelical
TgeneLMF1chr16:15102704chr16:943072ENST0000026230131150_72221.0568.0TransmembraneHelical


Top

Fusion Gene Sequence for PDXDC1-LMF1


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000563679_ENST00000262301_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(transcript)=2780nt_BP=841nt
AGCTTAGATCAGTGCCTTCTCTGAACAGCGTTCACTAAGCAGCCCCCAACCCCAAAACCCCCAAGTCCCCGGGCGCCGAGGACGCTGCGA
GTCCTGCGCATGCGCAAGGTTGCCCACTCGCTCACCGCCTCCTTGGCGAATGGCCTGTTCCATTCTCGAGGGATGCCGGCGGGAGGTGAG
GCGGGAGACTTGGAAGCCTGGGCCCGGAAGTGAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGAT
GCTGGAGGACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGTGGGCA
AGATATGGTGAGCATCCTCCAGTTAGTTCAGAATCTCATGCATGGAGATGAAGATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTGG
AGAACAAGGTCATATGGCTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAG
GATACTTTCAGATACCACCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACT
TGCAAAGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCAT
ATATCTTAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTG
TAACACTGTGTTTGGATCCCAGCATCAGATGGGCCTGATCAAGATCCGGGGGGACCGGTGCTGGCGAGACCTCACCTGCATGGACTTCCA
CTATGAGACCCAGCCGATGCCCAATCCTGTGGCGTACTACCTGCACCACTCACCCTGGTGGTTCCATCGCTTCGAGACGCTCAGCAACCA
CTTCATCGAGCTCCTGGTGCCCTTCTTCCTCTTCCTCGGCCGGCGGGCGTGCATCATCCACGGGGTGCTGCAGATCCTGTTCCAGGCCGT
CCTCATCGTCAGCGGGAACCTCAGCTTCCTGAACTGGCTGACTATGGTGCCCAGCCTGGCCTGCTTTGATGACGCCACCCTGGGATTCTT
GTTCCCCTCTGGGCCAGGCAGCCTGAAGGACCGAGTTCTGCAGATGCAGAGGGACATCCGAGGGGCCCGGCCCGAGCCCAGATTCGGCTC
CGTGGTGCGGCGTGCAGCCAACGTCTCGCTGGGCGTCCTGCTGGCCTGGCTCAGCGTGCCCGTGGTCCTCAACTTGCTGAGCTCCAGGCA
GGTCATGAACACCCACTTCAACTCTCTTCACATCGTCAACACTTACGGGGCCTTCGGAAGCATCACCAAGGAGCGGGCGGAGGTGATCCT
GCAGGGCACAGCCAGCTCCAACGCCAGCGCCCCCGATGCCATGTGGGAGGACTACGAGTTCAAGTGCAAGCCAGGTGACCCCAGCAGACG
GCCCTGCCTCATCTCCCCGTACCACTACCGCCTGGACTGGCTGATGTGGTTCGCGGCCTTCCAGACCTACGAGCACAACGACTGGATCAT
CCACCTGGCTGGCAAGCTCCTGGCCAGCGACGCCGAGGCCTTGTCCCTGCTGGCACACAACCCCTTCGCGGGCAGGCCCCCGCCCAGGTG
GGTCCGAGGAGAGCACTACAGGTACAAGTTCAGCCGTCCTGGGGGCAGGCACGCCGCCGAGGGCAAGTGGTGGGTGCGGAAGAGGATCGG
AGCCTACTTCCCTCCGCTCAGCCTGGAGGAGCTGAGGCCCTACTTCAGGGACCGTGGGTGGCCTCTGCCCGGGCCCCTCTAGACGTGCAC
CAGAAATAAAGGCGAAGACCCAGCCCCTCGGCGGCTCAGCAACGTTTGCCCTTCCCTGCGCCCAGCCCAAGCTGGGCATCGCCAAGAGAG
ACGTGGAGAGGAGAGCGGTGGGACCCAGCCCCCAGCACGGGGGTCCAGGGTGGGGTCTGTTGTCACATACTGTGGCGGCTCCCAGGCCCT
GCCCACCTGGGGCCCCACATCCAGGCCAACCCTTGTCCCAGGCGCCAGGGGCTCTGATCTCCCATCCATCCCACCCTCCTCCCAGAGGCC
CAGCCTGGGGCTGTGCCGCCCACAGGAGTTGAGACAATGGCCATCCTGACACCTTCCTCCACTACAGCCCTGACCATAGACCCAGCCAGG
TAGCTCTTGGGGTCTCTAGCGTCCCAGGGCCTGGTTTCTGTTCCCTCTTCAATGGTGTGTTCCCAGCCAGGTCCTGACCCTCAGAGCCAA
GTCCCTGTCACGTCTGGGGCAGCCAAACCCTCGCCCCACAGGGACCTGGACACGCCCGGCCAGGATGTGGGGTTGGATGGGCCATTTTCT
GTCCTATCCCTCATCTCCACCCCCGCCACAGCCTACACGCATCCCACACATGCAGGCACACACAGCCTGTGCACACATGTGTTCTTGGCC
CGGTTTCATCCCCCCATGACTGGTGTCTGTGAGGTGCAGATGGACACAGCGCACACCCAGACCCTCCACCAGGCTGTGACCTCGCTGCCT
CTGAGGCCTTGACAAGGCCCCTCAATCGGAGGACAGCCGGCCGTGCACACTTTCATCATCGTCGGACAAACAGCGTCTACTGCACATTTT

>In-frame_ENST00000563679_ENST00000262301_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(amino acids)=590AA_start in transcript=109_stop in transcript=1881
MPTRSPPPWRMACSILEGCRREVRRETWKPGPGSEIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVSIL
QLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRL
AIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMGLIKIRGDRCWRDLTCMDFHYETQPM
PNPVAYYLHHSPWWFHRFETLSNHFIELLVPFFLFLGRRACIIHGVLQILFQAVLIVSGNLSFLNWLTMVPSLACFDDATLGFLFPSGPG
SLKDRVLQMQRDIRGARPEPRFGSVVRRAANVSLGVLLAWLSVPVVLNLLSSRQVMNTHFNSLHIVNTYGAFGSITKERAEVILQGTASS
NASAPDAMWEDYEFKCKPGDPSRRPCLISPYHYRLDWLMWFAAFQTYEHNDWIIHLAGKLLASDAEALSLLAHNPFAGRPPPRWVRGEHY

--------------------------------------------------------------
>In-frame_ENST00000563679_ENST00000399843_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(transcript)=2776nt_BP=841nt
AGCTTAGATCAGTGCCTTCTCTGAACAGCGTTCACTAAGCAGCCCCCAACCCCAAAACCCCCAAGTCCCCGGGCGCCGAGGACGCTGCGA
GTCCTGCGCATGCGCAAGGTTGCCCACTCGCTCACCGCCTCCTTGGCGAATGGCCTGTTCCATTCTCGAGGGATGCCGGCGGGAGGTGAG
GCGGGAGACTTGGAAGCCTGGGCCCGGAAGTGAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGAT
GCTGGAGGACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGTGGGCA
AGATATGGTGAGCATCCTCCAGTTAGTTCAGAATCTCATGCATGGAGATGAAGATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTGG
AGAACAAGGTCATATGGCTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAG
GATACTTTCAGATACCACCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACT
TGCAAAGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCAT
ATATCTTAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTG
TAACACTGTGTTTGGATCCCAGCATCAGATGGGCCTGATCAAGATCCGGGGGGACCGGTGCTGGCGAGACCTCACCTGCATGGACTTCCA
CTATGAGACCCAGCCGATGCCCAATCCTGTGGCGTACTACCTGCACCACTCACCCTGGTGGTTCCATCGCTTCGAGACGCTCAGCAACCA
CTTCATCGAGCTCCTGGTGCCCTTCTTCCTCTTCCTCGGCCGGCGGGCGTGCATCATCCACGGGGTGCTGCAGATCCTGTTCCAGGCCGT
CCTCATCGTCAGCGGGAACCTCAGCTTCCTGAACTGGCTGACTATGGTGCCCAGCCTGGCCTGCTTTGATGACGCCACCCTGGGATTCTT
GTTCCCCTCTGGGCCAGGCAGCCTGAAGGACCGAGTTCTGCAGATGCAGAGGGACATCCGAGGGGCCCGGCCCGAGCCCAGATTCGGCTC
CGTGGTGCGGCGTGCAGCCAACGTCTCGCTGGGCGTCCTGCTGGCCTGGCTCAGCGTGCCCGTGGTCCTCAACTTGCTGAGCTCCAGGCA
GGTCATGAACACCCACTTCAACTCTCTTCACATCGTCAACACTTACGGGGCCTTCGGAAGCATCACCAAGGAGCGGGCGGAGGTGATCCT
GCAGGGCACAGCCAGCTCCAACGCCAGCGCCCCCGATGCCATGTGGGAGGACTACGAGTTCAAGTGCAAGCCAGGTGACCCCAGCAGACG
GCCCTGCCTCATCTCCCCGTACCACTACCGCCTGGACTGGCTGATGTGGTTCGCGGCCTTCCAGACCTACGAGCACAACGACTGGATCAT
CCACCTGGCTGGCAAGCTCCTGGCCAGCGACGCCGAGGCCTTGTCCCTGCTGGCACACAACCCCTTCGCGGGCAGGCCCCCGCCCAGGTG
GGTCCGAGGAGAGCACTACAGGTACAAGTTCAGCCGTCCTGGGGGCAGGCACGCCGCCGAGGGCAAGTGGTGGGTGCGGAAGAGGATCGG
AGCCTACTTCCCTCCGCTCAGCCTGGAGGAGCTGAGGCCCTACTTCAGGGACCGTGGGTGGCCTCTGCCCGGGCCCCTCTAGACGTGCAC
CAGAAATAAAGGCGAAGACCCAGCCCCTCGGCGGCTCAGCAACGTTTGCCCTTCCCTGCGCCCAGCCCAAGCTGGGCATCGCCAAGAGAG
ACGTGGAGAGGAGAGCGGTGGGACCCAGCCCCCAGCACGGGGGTCCAGGGTGGGGTCTGTTGTCACATACTGTGGCGGCTCCCAGGCCCT
GCCCACCTGGGGCCCCACATCCAGGCCAACCCTTGTCCCAGGCGCCAGGGGCTCTGATCTCCCATCCATCCCACCCTCCTCCCAGAGGCC
CAGCCTGGGGCTGTGCCGCCCACAGGAGTTGAGACAATGGCCATCCTGACACCTTCCTCCACTACAGCCCTGACCATAGACCCAGCCAGG
TAGCTCTTGGGGTCTCTAGCGTCCCAGGGCCTGGTTTCTGTTCCCTCTTCAATGGTGTGTTCCCAGCCAGGTCCTGACCCTCAGAGCCAA
GTCCCTGTCACGTCTGGGGCAGCCAAACCCTCGCCCCACAGGGACCTGGACACGCCCGGCCAGGATGTGGGGTTGGATGGGCCATTTTCT
GTCCTATCCCTCATCTCCACCCCCGCCACAGCCTACACGCATCCCACACATGCAGGCACACACAGCCTGTGCACACATGTGTTCTTGGCC
CGGTTTCATCCCCCCATGACTGGTGTCTGTGAGGTGCAGATGGACACAGCGCACACCCAGACCCTCCACCAGGCTGTGACCTCGCTGCCT
CTGAGGCCTTGACAAGGCCCCTCAATCGGAGGACAGCCGGCCGTGCACACTTTCATCATCGTCGGACAAACAGCGTCTACTGCACATTTT

>In-frame_ENST00000563679_ENST00000399843_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(amino acids)=590AA_start in transcript=109_stop in transcript=1881
MPTRSPPPWRMACSILEGCRREVRRETWKPGPGSEIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVSIL
QLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRL
AIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMGLIKIRGDRCWRDLTCMDFHYETQPM
PNPVAYYLHHSPWWFHRFETLSNHFIELLVPFFLFLGRRACIIHGVLQILFQAVLIVSGNLSFLNWLTMVPSLACFDDATLGFLFPSGPG
SLKDRVLQMQRDIRGARPEPRFGSVVRRAANVSLGVLLAWLSVPVVLNLLSSRQVMNTHFNSLHIVNTYGAFGSITKERAEVILQGTASS
NASAPDAMWEDYEFKCKPGDPSRRPCLISPYHYRLDWLMWFAAFQTYEHNDWIIHLAGKLLASDAEALSLLAHNPFAGRPPPRWVRGEHY

--------------------------------------------------------------
>In-frame_ENST00000325823_ENST00000262301_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(transcript)=2629nt_BP=690nt
ATTCTCGAGGGATGCCGGCGGGAGGTGAGGCGGGAGACTTGGAAGCCTGGGCCCGGAAGTGAGATAGCAGACCCCACGTTAGCTGAAATG
GGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGAGGACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGAT
ATTCCAGGCCCACTCCAGGGCAGTGGGCAAGATATGGTGAGCATCCTCCAGTTAGTTCAGAATCTCATGCATGGAGATGAAGATGAGGAG
CCCCAGAGCCCCAGAATCCAAAATATTGGAGAACAAGGTCATATGGCTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGAC
AAAGAGAAGCTGAGAAAACTTACAACTAGGATACTTTCAGATACCACCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCT
TATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTC
AATGTGTTATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTG
CCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACACTGTGTTTGGATCCCAGCATCAGATGGGCCTGATCAAGATCCGGGGGGACCGGTGC
TGGCGAGACCTCACCTGCATGGACTTCCACTATGAGACCCAGCCGATGCCCAATCCTGTGGCGTACTACCTGCACCACTCACCCTGGTGG
TTCCATCGCTTCGAGACGCTCAGCAACCACTTCATCGAGCTCCTGGTGCCCTTCTTCCTCTTCCTCGGCCGGCGGGCGTGCATCATCCAC
GGGGTGCTGCAGATCCTGTTCCAGGCCGTCCTCATCGTCAGCGGGAACCTCAGCTTCCTGAACTGGCTGACTATGGTGCCCAGCCTGGCC
TGCTTTGATGACGCCACCCTGGGATTCTTGTTCCCCTCTGGGCCAGGCAGCCTGAAGGACCGAGTTCTGCAGATGCAGAGGGACATCCGA
GGGGCCCGGCCCGAGCCCAGATTCGGCTCCGTGGTGCGGCGTGCAGCCAACGTCTCGCTGGGCGTCCTGCTGGCCTGGCTCAGCGTGCCC
GTGGTCCTCAACTTGCTGAGCTCCAGGCAGGTCATGAACACCCACTTCAACTCTCTTCACATCGTCAACACTTACGGGGCCTTCGGAAGC
ATCACCAAGGAGCGGGCGGAGGTGATCCTGCAGGGCACAGCCAGCTCCAACGCCAGCGCCCCCGATGCCATGTGGGAGGACTACGAGTTC
AAGTGCAAGCCAGGTGACCCCAGCAGACGGCCCTGCCTCATCTCCCCGTACCACTACCGCCTGGACTGGCTGATGTGGTTCGCGGCCTTC
CAGACCTACGAGCACAACGACTGGATCATCCACCTGGCTGGCAAGCTCCTGGCCAGCGACGCCGAGGCCTTGTCCCTGCTGGCACACAAC
CCCTTCGCGGGCAGGCCCCCGCCCAGGTGGGTCCGAGGAGAGCACTACAGGTACAAGTTCAGCCGTCCTGGGGGCAGGCACGCCGCCGAG
GGCAAGTGGTGGGTGCGGAAGAGGATCGGAGCCTACTTCCCTCCGCTCAGCCTGGAGGAGCTGAGGCCCTACTTCAGGGACCGTGGGTGG
CCTCTGCCCGGGCCCCTCTAGACGTGCACCAGAAATAAAGGCGAAGACCCAGCCCCTCGGCGGCTCAGCAACGTTTGCCCTTCCCTGCGC
CCAGCCCAAGCTGGGCATCGCCAAGAGAGACGTGGAGAGGAGAGCGGTGGGACCCAGCCCCCAGCACGGGGGTCCAGGGTGGGGTCTGTT
GTCACATACTGTGGCGGCTCCCAGGCCCTGCCCACCTGGGGCCCCACATCCAGGCCAACCCTTGTCCCAGGCGCCAGGGGCTCTGATCTC
CCATCCATCCCACCCTCCTCCCAGAGGCCCAGCCTGGGGCTGTGCCGCCCACAGGAGTTGAGACAATGGCCATCCTGACACCTTCCTCCA
CTACAGCCCTGACCATAGACCCAGCCAGGTAGCTCTTGGGGTCTCTAGCGTCCCAGGGCCTGGTTTCTGTTCCCTCTTCAATGGTGTGTT
CCCAGCCAGGTCCTGACCCTCAGAGCCAAGTCCCTGTCACGTCTGGGGCAGCCAAACCCTCGCCCCACAGGGACCTGGACACGCCCGGCC
AGGATGTGGGGTTGGATGGGCCATTTTCTGTCCTATCCCTCATCTCCACCCCCGCCACAGCCTACACGCATCCCACACATGCAGGCACAC
ACAGCCTGTGCACACATGTGTTCTTGGCCCGGTTTCATCCCCCCATGACTGGTGTCTGTGAGGTGCAGATGGACACAGCGCACACCCAGA
CCCTCCACCAGGCTGTGACCTCGCTGCCTCTGAGGCCTTGACAAGGCCCCTCAATCGGAGGACAGCCGGCCGTGCACACTTTCATCATCG
TCGGACAAACAGCGTCTACTGCACATTTTTCTTATTCCTATTCTTGAGCCATAGCTATGGCATATTCTTCTACTATTCCTATTATACCAC

>In-frame_ENST00000325823_ENST00000262301_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(amino acids)=547AA_start in transcript=87_stop in transcript=1730
MGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTL
DKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLG
LPFPCLCRVPCNTVFGSQHQMGLIKIRGDRCWRDLTCMDFHYETQPMPNPVAYYLHHSPWWFHRFETLSNHFIELLVPFFLFLGRRACII
HGVLQILFQAVLIVSGNLSFLNWLTMVPSLACFDDATLGFLFPSGPGSLKDRVLQMQRDIRGARPEPRFGSVVRRAANVSLGVLLAWLSV
PVVLNLLSSRQVMNTHFNSLHIVNTYGAFGSITKERAEVILQGTASSNASAPDAMWEDYEFKCKPGDPSRRPCLISPYHYRLDWLMWFAA
FQTYEHNDWIIHLAGKLLASDAEALSLLAHNPFAGRPPPRWVRGEHYRYKFSRPGGRHAAEGKWWVRKRIGAYFPPLSLEELRPYFRDRG

--------------------------------------------------------------
>In-frame_ENST00000325823_ENST00000399843_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(transcript)=2625nt_BP=690nt
ATTCTCGAGGGATGCCGGCGGGAGGTGAGGCGGGAGACTTGGAAGCCTGGGCCCGGAAGTGAGATAGCAGACCCCACGTTAGCTGAAATG
GGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGAGGACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGAT
ATTCCAGGCCCACTCCAGGGCAGTGGGCAAGATATGGTGAGCATCCTCCAGTTAGTTCAGAATCTCATGCATGGAGATGAAGATGAGGAG
CCCCAGAGCCCCAGAATCCAAAATATTGGAGAACAAGGTCATATGGCTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGAC
AAAGAGAAGCTGAGAAAACTTACAACTAGGATACTTTCAGATACCACCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCT
TATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTC
AATGTGTTATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTG
CCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACACTGTGTTTGGATCCCAGCATCAGATGGGCCTGATCAAGATCCGGGGGGACCGGTGC
TGGCGAGACCTCACCTGCATGGACTTCCACTATGAGACCCAGCCGATGCCCAATCCTGTGGCGTACTACCTGCACCACTCACCCTGGTGG
TTCCATCGCTTCGAGACGCTCAGCAACCACTTCATCGAGCTCCTGGTGCCCTTCTTCCTCTTCCTCGGCCGGCGGGCGTGCATCATCCAC
GGGGTGCTGCAGATCCTGTTCCAGGCCGTCCTCATCGTCAGCGGGAACCTCAGCTTCCTGAACTGGCTGACTATGGTGCCCAGCCTGGCC
TGCTTTGATGACGCCACCCTGGGATTCTTGTTCCCCTCTGGGCCAGGCAGCCTGAAGGACCGAGTTCTGCAGATGCAGAGGGACATCCGA
GGGGCCCGGCCCGAGCCCAGATTCGGCTCCGTGGTGCGGCGTGCAGCCAACGTCTCGCTGGGCGTCCTGCTGGCCTGGCTCAGCGTGCCC
GTGGTCCTCAACTTGCTGAGCTCCAGGCAGGTCATGAACACCCACTTCAACTCTCTTCACATCGTCAACACTTACGGGGCCTTCGGAAGC
ATCACCAAGGAGCGGGCGGAGGTGATCCTGCAGGGCACAGCCAGCTCCAACGCCAGCGCCCCCGATGCCATGTGGGAGGACTACGAGTTC
AAGTGCAAGCCAGGTGACCCCAGCAGACGGCCCTGCCTCATCTCCCCGTACCACTACCGCCTGGACTGGCTGATGTGGTTCGCGGCCTTC
CAGACCTACGAGCACAACGACTGGATCATCCACCTGGCTGGCAAGCTCCTGGCCAGCGACGCCGAGGCCTTGTCCCTGCTGGCACACAAC
CCCTTCGCGGGCAGGCCCCCGCCCAGGTGGGTCCGAGGAGAGCACTACAGGTACAAGTTCAGCCGTCCTGGGGGCAGGCACGCCGCCGAG
GGCAAGTGGTGGGTGCGGAAGAGGATCGGAGCCTACTTCCCTCCGCTCAGCCTGGAGGAGCTGAGGCCCTACTTCAGGGACCGTGGGTGG
CCTCTGCCCGGGCCCCTCTAGACGTGCACCAGAAATAAAGGCGAAGACCCAGCCCCTCGGCGGCTCAGCAACGTTTGCCCTTCCCTGCGC
CCAGCCCAAGCTGGGCATCGCCAAGAGAGACGTGGAGAGGAGAGCGGTGGGACCCAGCCCCCAGCACGGGGGTCCAGGGTGGGGTCTGTT
GTCACATACTGTGGCGGCTCCCAGGCCCTGCCCACCTGGGGCCCCACATCCAGGCCAACCCTTGTCCCAGGCGCCAGGGGCTCTGATCTC
CCATCCATCCCACCCTCCTCCCAGAGGCCCAGCCTGGGGCTGTGCCGCCCACAGGAGTTGAGACAATGGCCATCCTGACACCTTCCTCCA
CTACAGCCCTGACCATAGACCCAGCCAGGTAGCTCTTGGGGTCTCTAGCGTCCCAGGGCCTGGTTTCTGTTCCCTCTTCAATGGTGTGTT
CCCAGCCAGGTCCTGACCCTCAGAGCCAAGTCCCTGTCACGTCTGGGGCAGCCAAACCCTCGCCCCACAGGGACCTGGACACGCCCGGCC
AGGATGTGGGGTTGGATGGGCCATTTTCTGTCCTATCCCTCATCTCCACCCCCGCCACAGCCTACACGCATCCCACACATGCAGGCACAC
ACAGCCTGTGCACACATGTGTTCTTGGCCCGGTTTCATCCCCCCATGACTGGTGTCTGTGAGGTGCAGATGGACACAGCGCACACCCAGA
CCCTCCACCAGGCTGTGACCTCGCTGCCTCTGAGGCCTTGACAAGGCCCCTCAATCGGAGGACAGCCGGCCGTGCACACTTTCATCATCG
TCGGACAAACAGCGTCTACTGCACATTTTTCTTATTCCTATTCTTGAGCCATAGCTATGGCATATTCTTCTACTATTCCTATTATACCAC

>In-frame_ENST00000325823_ENST00000399843_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(amino acids)=547AA_start in transcript=87_stop in transcript=1730
MGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTL
DKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLG
LPFPCLCRVPCNTVFGSQHQMGLIKIRGDRCWRDLTCMDFHYETQPMPNPVAYYLHHSPWWFHRFETLSNHFIELLVPFFLFLGRRACII
HGVLQILFQAVLIVSGNLSFLNWLTMVPSLACFDDATLGFLFPSGPGSLKDRVLQMQRDIRGARPEPRFGSVVRRAANVSLGVLLAWLSV
PVVLNLLSSRQVMNTHFNSLHIVNTYGAFGSITKERAEVILQGTASSNASAPDAMWEDYEFKCKPGDPSRRPCLISPYHYRLDWLMWFAA
FQTYEHNDWIIHLAGKLLASDAEALSLLAHNPFAGRPPPRWVRGEHYRYKFSRPGGRHAAEGKWWVRKRIGAYFPPLSLEELRPYFRDRG

--------------------------------------------------------------
>In-frame_ENST00000447912_ENST00000262301_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(transcript)=2634nt_BP=695nt
ATTTCCAGCCTTTCACTCCATGAATAGTACTTTGTGATTATTATACTTCTACCTTGATGATTGCAACAGGCTGCTGGAAAGAGTTTGGTG
AACAATCCACCGGGCATCCTCCCCCCTTCACCTGCGCACGTTAGGGAGGGCCGGCGTGGCGCCCAGACGGACTCTCACCCTGTCGCCCAG
GCTGGAGTGCAATGGCGCCATCTCGGTTCACTGCAACCTCCGCCTCCCGGGTTCAAACGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGG
GGTTACAGGCACACCACCACGCCCAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGAGG
ACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGATATGAAAATGGGT
GTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATG
GCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCG
GCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACACTGTGTTTGGATCCCAGCATCAGATGGGCCTGATCAAGATCCGGGGGGACC
GGTGCTGGCGAGACCTCACCTGCATGGACTTCCACTATGAGACCCAGCCGATGCCCAATCCTGTGGCGTACTACCTGCACCACTCACCCT
GGTGGTTCCATCGCTTCGAGACGCTCAGCAACCACTTCATCGAGCTCCTGGTGCCCTTCTTCCTCTTCCTCGGCCGGCGGGCGTGCATCA
TCCACGGGGTGCTGCAGATCCTGTTCCAGGCCGTCCTCATCGTCAGCGGGAACCTCAGCTTCCTGAACTGGCTGACTATGGTGCCCAGCC
TGGCCTGCTTTGATGACGCCACCCTGGGATTCTTGTTCCCCTCTGGGCCAGGCAGCCTGAAGGACCGAGTTCTGCAGATGCAGAGGGACA
TCCGAGGGGCCCGGCCCGAGCCCAGATTCGGCTCCGTGGTGCGGCGTGCAGCCAACGTCTCGCTGGGCGTCCTGCTGGCCTGGCTCAGCG
TGCCCGTGGTCCTCAACTTGCTGAGCTCCAGGCAGGTCATGAACACCCACTTCAACTCTCTTCACATCGTCAACACTTACGGGGCCTTCG
GAAGCATCACCAAGGAGCGGGCGGAGGTGATCCTGCAGGGCACAGCCAGCTCCAACGCCAGCGCCCCCGATGCCATGTGGGAGGACTACG
AGTTCAAGTGCAAGCCAGGTGACCCCAGCAGACGGCCCTGCCTCATCTCCCCGTACCACTACCGCCTGGACTGGCTGATGTGGTTCGCGG
CCTTCCAGACCTACGAGCACAACGACTGGATCATCCACCTGGCTGGCAAGCTCCTGGCCAGCGACGCCGAGGCCTTGTCCCTGCTGGCAC
ACAACCCCTTCGCGGGCAGGCCCCCGCCCAGGTGGGTCCGAGGAGAGCACTACAGGTACAAGTTCAGCCGTCCTGGGGGCAGGCACGCCG
CCGAGGGCAAGTGGTGGGTGCGGAAGAGGATCGGAGCCTACTTCCCTCCGCTCAGCCTGGAGGAGCTGAGGCCCTACTTCAGGGACCGTG
GGTGGCCTCTGCCCGGGCCCCTCTAGACGTGCACCAGAAATAAAGGCGAAGACCCAGCCCCTCGGCGGCTCAGCAACGTTTGCCCTTCCC
TGCGCCCAGCCCAAGCTGGGCATCGCCAAGAGAGACGTGGAGAGGAGAGCGGTGGGACCCAGCCCCCAGCACGGGGGTCCAGGGTGGGGT
CTGTTGTCACATACTGTGGCGGCTCCCAGGCCCTGCCCACCTGGGGCCCCACATCCAGGCCAACCCTTGTCCCAGGCGCCAGGGGCTCTG
ATCTCCCATCCATCCCACCCTCCTCCCAGAGGCCCAGCCTGGGGCTGTGCCGCCCACAGGAGTTGAGACAATGGCCATCCTGACACCTTC
CTCCACTACAGCCCTGACCATAGACCCAGCCAGGTAGCTCTTGGGGTCTCTAGCGTCCCAGGGCCTGGTTTCTGTTCCCTCTTCAATGGT
GTGTTCCCAGCCAGGTCCTGACCCTCAGAGCCAAGTCCCTGTCACGTCTGGGGCAGCCAAACCCTCGCCCCACAGGGACCTGGACACGCC
CGGCCAGGATGTGGGGTTGGATGGGCCATTTTCTGTCCTATCCCTCATCTCCACCCCCGCCACAGCCTACACGCATCCCACACATGCAGG
CACACACAGCCTGTGCACACATGTGTTCTTGGCCCGGTTTCATCCCCCCATGACTGGTGTCTGTGAGGTGCAGATGGACACAGCGCACAC
CCAGACCCTCCACCAGGCTGTGACCTCGCTGCCTCTGAGGCCTTGACAAGGCCCCTCAATCGGAGGACAGCCGGCCGTGCACACTTTCAT
CATCGTCGGACAAACAGCGTCTACTGCACATTTTTCTTATTCCTATTCTTGAGCCATAGCTATGGCATATTCTTCTACTATTCCTATTAT

>In-frame_ENST00000447912_ENST00000262301_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(amino acids)=489AA_start in transcript=266_stop in transcript=1735
MGLQAHHHAQIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVV
DGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMGLIKIRGDRCWRDLTCMDFHYETQPMPNPVAYYLHHS
PWWFHRFETLSNHFIELLVPFFLFLGRRACIIHGVLQILFQAVLIVSGNLSFLNWLTMVPSLACFDDATLGFLFPSGPGSLKDRVLQMQR
DIRGARPEPRFGSVVRRAANVSLGVLLAWLSVPVVLNLLSSRQVMNTHFNSLHIVNTYGAFGSITKERAEVILQGTASSNASAPDAMWED
YEFKCKPGDPSRRPCLISPYHYRLDWLMWFAAFQTYEHNDWIIHLAGKLLASDAEALSLLAHNPFAGRPPPRWVRGEHYRYKFSRPGGRH

--------------------------------------------------------------
>In-frame_ENST00000447912_ENST00000399843_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(transcript)=2630nt_BP=695nt
ATTTCCAGCCTTTCACTCCATGAATAGTACTTTGTGATTATTATACTTCTACCTTGATGATTGCAACAGGCTGCTGGAAAGAGTTTGGTG
AACAATCCACCGGGCATCCTCCCCCCTTCACCTGCGCACGTTAGGGAGGGCCGGCGTGGCGCCCAGACGGACTCTCACCCTGTCGCCCAG
GCTGGAGTGCAATGGCGCCATCTCGGTTCACTGCAACCTCCGCCTCCCGGGTTCAAACGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGG
GGTTACAGGCACACCACCACGCCCAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGAGG
ACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGATATGAAAATGGGT
GTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATG
GCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCG
GCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACACTGTGTTTGGATCCCAGCATCAGATGGGCCTGATCAAGATCCGGGGGGACC
GGTGCTGGCGAGACCTCACCTGCATGGACTTCCACTATGAGACCCAGCCGATGCCCAATCCTGTGGCGTACTACCTGCACCACTCACCCT
GGTGGTTCCATCGCTTCGAGACGCTCAGCAACCACTTCATCGAGCTCCTGGTGCCCTTCTTCCTCTTCCTCGGCCGGCGGGCGTGCATCA
TCCACGGGGTGCTGCAGATCCTGTTCCAGGCCGTCCTCATCGTCAGCGGGAACCTCAGCTTCCTGAACTGGCTGACTATGGTGCCCAGCC
TGGCCTGCTTTGATGACGCCACCCTGGGATTCTTGTTCCCCTCTGGGCCAGGCAGCCTGAAGGACCGAGTTCTGCAGATGCAGAGGGACA
TCCGAGGGGCCCGGCCCGAGCCCAGATTCGGCTCCGTGGTGCGGCGTGCAGCCAACGTCTCGCTGGGCGTCCTGCTGGCCTGGCTCAGCG
TGCCCGTGGTCCTCAACTTGCTGAGCTCCAGGCAGGTCATGAACACCCACTTCAACTCTCTTCACATCGTCAACACTTACGGGGCCTTCG
GAAGCATCACCAAGGAGCGGGCGGAGGTGATCCTGCAGGGCACAGCCAGCTCCAACGCCAGCGCCCCCGATGCCATGTGGGAGGACTACG
AGTTCAAGTGCAAGCCAGGTGACCCCAGCAGACGGCCCTGCCTCATCTCCCCGTACCACTACCGCCTGGACTGGCTGATGTGGTTCGCGG
CCTTCCAGACCTACGAGCACAACGACTGGATCATCCACCTGGCTGGCAAGCTCCTGGCCAGCGACGCCGAGGCCTTGTCCCTGCTGGCAC
ACAACCCCTTCGCGGGCAGGCCCCCGCCCAGGTGGGTCCGAGGAGAGCACTACAGGTACAAGTTCAGCCGTCCTGGGGGCAGGCACGCCG
CCGAGGGCAAGTGGTGGGTGCGGAAGAGGATCGGAGCCTACTTCCCTCCGCTCAGCCTGGAGGAGCTGAGGCCCTACTTCAGGGACCGTG
GGTGGCCTCTGCCCGGGCCCCTCTAGACGTGCACCAGAAATAAAGGCGAAGACCCAGCCCCTCGGCGGCTCAGCAACGTTTGCCCTTCCC
TGCGCCCAGCCCAAGCTGGGCATCGCCAAGAGAGACGTGGAGAGGAGAGCGGTGGGACCCAGCCCCCAGCACGGGGGTCCAGGGTGGGGT
CTGTTGTCACATACTGTGGCGGCTCCCAGGCCCTGCCCACCTGGGGCCCCACATCCAGGCCAACCCTTGTCCCAGGCGCCAGGGGCTCTG
ATCTCCCATCCATCCCACCCTCCTCCCAGAGGCCCAGCCTGGGGCTGTGCCGCCCACAGGAGTTGAGACAATGGCCATCCTGACACCTTC
CTCCACTACAGCCCTGACCATAGACCCAGCCAGGTAGCTCTTGGGGTCTCTAGCGTCCCAGGGCCTGGTTTCTGTTCCCTCTTCAATGGT
GTGTTCCCAGCCAGGTCCTGACCCTCAGAGCCAAGTCCCTGTCACGTCTGGGGCAGCCAAACCCTCGCCCCACAGGGACCTGGACACGCC
CGGCCAGGATGTGGGGTTGGATGGGCCATTTTCTGTCCTATCCCTCATCTCCACCCCCGCCACAGCCTACACGCATCCCACACATGCAGG
CACACACAGCCTGTGCACACATGTGTTCTTGGCCCGGTTTCATCCCCCCATGACTGGTGTCTGTGAGGTGCAGATGGACACAGCGCACAC
CCAGACCCTCCACCAGGCTGTGACCTCGCTGCCTCTGAGGCCTTGACAAGGCCCCTCAATCGGAGGACAGCCGGCCGTGCACACTTTCAT
CATCGTCGGACAAACAGCGTCTACTGCACATTTTTCTTATTCCTATTCTTGAGCCATAGCTATGGCATATTCTTCTACTATTCCTATTAT

>In-frame_ENST00000447912_ENST00000399843_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(amino acids)=489AA_start in transcript=266_stop in transcript=1735
MGLQAHHHAQIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVV
DGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMGLIKIRGDRCWRDLTCMDFHYETQPMPNPVAYYLHHS
PWWFHRFETLSNHFIELLVPFFLFLGRRACIIHGVLQILFQAVLIVSGNLSFLNWLTMVPSLACFDDATLGFLFPSGPGSLKDRVLQMQR
DIRGARPEPRFGSVVRRAANVSLGVLLAWLSVPVVLNLLSSRQVMNTHFNSLHIVNTYGAFGSITKERAEVILQGTASSNASAPDAMWED
YEFKCKPGDPSRRPCLISPYHYRLDWLMWFAAFQTYEHNDWIIHLAGKLLASDAEALSLLAHNPFAGRPPPRWVRGEHYRYKFSRPGGRH

--------------------------------------------------------------
>In-frame_ENST00000535621_ENST00000262301_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(transcript)=2775nt_BP=836nt
CCCCGCCCCGCCGCCTCTCAACCATCAGGTTCGGCAGCCCGCGGCGCCGCCTGGCAGCTCCTCCTCTTCTCCGCCCCGCCGGCCGCGGGC
GCGGGGGACGTCAGCGCTGCCAGCGTGGAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTAGAGCCCGGGACCGCCAGGCCACCACCGGCCG
CCTCAGCCATGGACGCGTCCCTGGAGAAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGG
AGGACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGTGGGCAAGATA
TGGTGAGCATCCTCCAGTTAGTTCAGAATCTCATGCATGGAGATGAAGATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTGGAGAAC
AAGGTCATATGGCTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATAC
TTTCAGATACCACCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAA
AGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATC
TTAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACA
CTGTGTTTGGATCCCAGCATCAGATGGGCCTGATCAAGATCCGGGGGGACCGGTGCTGGCGAGACCTCACCTGCATGGACTTCCACTATG
AGACCCAGCCGATGCCCAATCCTGTGGCGTACTACCTGCACCACTCACCCTGGTGGTTCCATCGCTTCGAGACGCTCAGCAACCACTTCA
TCGAGCTCCTGGTGCCCTTCTTCCTCTTCCTCGGCCGGCGGGCGTGCATCATCCACGGGGTGCTGCAGATCCTGTTCCAGGCCGTCCTCA
TCGTCAGCGGGAACCTCAGCTTCCTGAACTGGCTGACTATGGTGCCCAGCCTGGCCTGCTTTGATGACGCCACCCTGGGATTCTTGTTCC
CCTCTGGGCCAGGCAGCCTGAAGGACCGAGTTCTGCAGATGCAGAGGGACATCCGAGGGGCCCGGCCCGAGCCCAGATTCGGCTCCGTGG
TGCGGCGTGCAGCCAACGTCTCGCTGGGCGTCCTGCTGGCCTGGCTCAGCGTGCCCGTGGTCCTCAACTTGCTGAGCTCCAGGCAGGTCA
TGAACACCCACTTCAACTCTCTTCACATCGTCAACACTTACGGGGCCTTCGGAAGCATCACCAAGGAGCGGGCGGAGGTGATCCTGCAGG
GCACAGCCAGCTCCAACGCCAGCGCCCCCGATGCCATGTGGGAGGACTACGAGTTCAAGTGCAAGCCAGGTGACCCCAGCAGACGGCCCT
GCCTCATCTCCCCGTACCACTACCGCCTGGACTGGCTGATGTGGTTCGCGGCCTTCCAGACCTACGAGCACAACGACTGGATCATCCACC
TGGCTGGCAAGCTCCTGGCCAGCGACGCCGAGGCCTTGTCCCTGCTGGCACACAACCCCTTCGCGGGCAGGCCCCCGCCCAGGTGGGTCC
GAGGAGAGCACTACAGGTACAAGTTCAGCCGTCCTGGGGGCAGGCACGCCGCCGAGGGCAAGTGGTGGGTGCGGAAGAGGATCGGAGCCT
ACTTCCCTCCGCTCAGCCTGGAGGAGCTGAGGCCCTACTTCAGGGACCGTGGGTGGCCTCTGCCCGGGCCCCTCTAGACGTGCACCAGAA
ATAAAGGCGAAGACCCAGCCCCTCGGCGGCTCAGCAACGTTTGCCCTTCCCTGCGCCCAGCCCAAGCTGGGCATCGCCAAGAGAGACGTG
GAGAGGAGAGCGGTGGGACCCAGCCCCCAGCACGGGGGTCCAGGGTGGGGTCTGTTGTCACATACTGTGGCGGCTCCCAGGCCCTGCCCA
CCTGGGGCCCCACATCCAGGCCAACCCTTGTCCCAGGCGCCAGGGGCTCTGATCTCCCATCCATCCCACCCTCCTCCCAGAGGCCCAGCC
TGGGGCTGTGCCGCCCACAGGAGTTGAGACAATGGCCATCCTGACACCTTCCTCCACTACAGCCCTGACCATAGACCCAGCCAGGTAGCT
CTTGGGGTCTCTAGCGTCCCAGGGCCTGGTTTCTGTTCCCTCTTCAATGGTGTGTTCCCAGCCAGGTCCTGACCCTCAGAGCCAAGTCCC
TGTCACGTCTGGGGCAGCCAAACCCTCGCCCCACAGGGACCTGGACACGCCCGGCCAGGATGTGGGGTTGGATGGGCCATTTTCTGTCCT
ATCCCTCATCTCCACCCCCGCCACAGCCTACACGCATCCCACACATGCAGGCACACACAGCCTGTGCACACATGTGTTCTTGGCCCGGTT
TCATCCCCCCATGACTGGTGTCTGTGAGGTGCAGATGGACACAGCGCACACCCAGACCCTCCACCAGGCTGTGACCTCGCTGCCTCTGAG
GCCTTGACAAGGCCCCTCAATCGGAGGACAGCCGGCCGTGCACACTTTCATCATCGTCGGACAAACAGCGTCTACTGCACATTTTTCTTA

>In-frame_ENST00000535621_ENST00000262301_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(amino acids)=608AA_start in transcript=50_stop in transcript=1876
MAAPPLLRPAGRGRGGRQRCQRGRSCGAREEEVEPGTARPPPAASAMDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLIS
GDIPGPLQGSGQDMVSILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENG
CAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMGLIKIRGD
RCWRDLTCMDFHYETQPMPNPVAYYLHHSPWWFHRFETLSNHFIELLVPFFLFLGRRACIIHGVLQILFQAVLIVSGNLSFLNWLTMVPS
LACFDDATLGFLFPSGPGSLKDRVLQMQRDIRGARPEPRFGSVVRRAANVSLGVLLAWLSVPVVLNLLSSRQVMNTHFNSLHIVNTYGAF
GSITKERAEVILQGTASSNASAPDAMWEDYEFKCKPGDPSRRPCLISPYHYRLDWLMWFAAFQTYEHNDWIIHLAGKLLASDAEALSLLA

--------------------------------------------------------------
>In-frame_ENST00000535621_ENST00000399843_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(transcript)=2771nt_BP=836nt
CCCCGCCCCGCCGCCTCTCAACCATCAGGTTCGGCAGCCCGCGGCGCCGCCTGGCAGCTCCTCCTCTTCTCCGCCCCGCCGGCCGCGGGC
GCGGGGGACGTCAGCGCTGCCAGCGTGGAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTAGAGCCCGGGACCGCCAGGCCACCACCGGCCG
CCTCAGCCATGGACGCGTCCCTGGAGAAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGG
AGGACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGTGGGCAAGATA
TGGTGAGCATCCTCCAGTTAGTTCAGAATCTCATGCATGGAGATGAAGATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTGGAGAAC
AAGGTCATATGGCTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATAC
TTTCAGATACCACCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAA
AGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATC
TTAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACA
CTGTGTTTGGATCCCAGCATCAGATGGGCCTGATCAAGATCCGGGGGGACCGGTGCTGGCGAGACCTCACCTGCATGGACTTCCACTATG
AGACCCAGCCGATGCCCAATCCTGTGGCGTACTACCTGCACCACTCACCCTGGTGGTTCCATCGCTTCGAGACGCTCAGCAACCACTTCA
TCGAGCTCCTGGTGCCCTTCTTCCTCTTCCTCGGCCGGCGGGCGTGCATCATCCACGGGGTGCTGCAGATCCTGTTCCAGGCCGTCCTCA
TCGTCAGCGGGAACCTCAGCTTCCTGAACTGGCTGACTATGGTGCCCAGCCTGGCCTGCTTTGATGACGCCACCCTGGGATTCTTGTTCC
CCTCTGGGCCAGGCAGCCTGAAGGACCGAGTTCTGCAGATGCAGAGGGACATCCGAGGGGCCCGGCCCGAGCCCAGATTCGGCTCCGTGG
TGCGGCGTGCAGCCAACGTCTCGCTGGGCGTCCTGCTGGCCTGGCTCAGCGTGCCCGTGGTCCTCAACTTGCTGAGCTCCAGGCAGGTCA
TGAACACCCACTTCAACTCTCTTCACATCGTCAACACTTACGGGGCCTTCGGAAGCATCACCAAGGAGCGGGCGGAGGTGATCCTGCAGG
GCACAGCCAGCTCCAACGCCAGCGCCCCCGATGCCATGTGGGAGGACTACGAGTTCAAGTGCAAGCCAGGTGACCCCAGCAGACGGCCCT
GCCTCATCTCCCCGTACCACTACCGCCTGGACTGGCTGATGTGGTTCGCGGCCTTCCAGACCTACGAGCACAACGACTGGATCATCCACC
TGGCTGGCAAGCTCCTGGCCAGCGACGCCGAGGCCTTGTCCCTGCTGGCACACAACCCCTTCGCGGGCAGGCCCCCGCCCAGGTGGGTCC
GAGGAGAGCACTACAGGTACAAGTTCAGCCGTCCTGGGGGCAGGCACGCCGCCGAGGGCAAGTGGTGGGTGCGGAAGAGGATCGGAGCCT
ACTTCCCTCCGCTCAGCCTGGAGGAGCTGAGGCCCTACTTCAGGGACCGTGGGTGGCCTCTGCCCGGGCCCCTCTAGACGTGCACCAGAA
ATAAAGGCGAAGACCCAGCCCCTCGGCGGCTCAGCAACGTTTGCCCTTCCCTGCGCCCAGCCCAAGCTGGGCATCGCCAAGAGAGACGTG
GAGAGGAGAGCGGTGGGACCCAGCCCCCAGCACGGGGGTCCAGGGTGGGGTCTGTTGTCACATACTGTGGCGGCTCCCAGGCCCTGCCCA
CCTGGGGCCCCACATCCAGGCCAACCCTTGTCCCAGGCGCCAGGGGCTCTGATCTCCCATCCATCCCACCCTCCTCCCAGAGGCCCAGCC
TGGGGCTGTGCCGCCCACAGGAGTTGAGACAATGGCCATCCTGACACCTTCCTCCACTACAGCCCTGACCATAGACCCAGCCAGGTAGCT
CTTGGGGTCTCTAGCGTCCCAGGGCCTGGTTTCTGTTCCCTCTTCAATGGTGTGTTCCCAGCCAGGTCCTGACCCTCAGAGCCAAGTCCC
TGTCACGTCTGGGGCAGCCAAACCCTCGCCCCACAGGGACCTGGACACGCCCGGCCAGGATGTGGGGTTGGATGGGCCATTTTCTGTCCT
ATCCCTCATCTCCACCCCCGCCACAGCCTACACGCATCCCACACATGCAGGCACACACAGCCTGTGCACACATGTGTTCTTGGCCCGGTT
TCATCCCCCCATGACTGGTGTCTGTGAGGTGCAGATGGACACAGCGCACACCCAGACCCTCCACCAGGCTGTGACCTCGCTGCCTCTGAG
GCCTTGACAAGGCCCCTCAATCGGAGGACAGCCGGCCGTGCACACTTTCATCATCGTCGGACAAACAGCGTCTACTGCACATTTTTCTTA

>In-frame_ENST00000535621_ENST00000399843_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(amino acids)=608AA_start in transcript=50_stop in transcript=1876
MAAPPLLRPAGRGRGGRQRCQRGRSCGAREEEVEPGTARPPPAASAMDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLIS
GDIPGPLQGSGQDMVSILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENG
CAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMGLIKIRGD
RCWRDLTCMDFHYETQPMPNPVAYYLHHSPWWFHRFETLSNHFIELLVPFFLFLGRRACIIHGVLQILFQAVLIVSGNLSFLNWLTMVPS
LACFDDATLGFLFPSGPGSLKDRVLQMQRDIRGARPEPRFGSVVRRAANVSLGVLLAWLSVPVVLNLLSSRQVMNTHFNSLHIVNTYGAF
GSITKERAEVILQGTASSNASAPDAMWEDYEFKCKPGDPSRRPCLISPYHYRLDWLMWFAAFQTYEHNDWIIHLAGKLLASDAEALSLLA

--------------------------------------------------------------
>In-frame_ENST00000396410_ENST00000262301_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(transcript)=2684nt_BP=745nt
CGGGGGACGTCAGCGCTGCCAGCGTGGAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTAGAGCCCGGGACCGCCAGGCCACCACCGGCCGC
CTCAGCCATGGACGCGTCCCTGGAGAAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGA
GGACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGTGGGCAAGATAT
GGTGAGCATCCTCCAGTTAGTTCAGAATCTCATGCATGGAGATGAAGATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTGGAGAACA
AGGTCATATGGCTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATACT
TTCAGATACCACCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAA
GATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATCT
TAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACAC
TGTGTTTGGATCCCAGCATCAGATGGGCCTGATCAAGATCCGGGGGGACCGGTGCTGGCGAGACCTCACCTGCATGGACTTCCACTATGA
GACCCAGCCGATGCCCAATCCTGTGGCGTACTACCTGCACCACTCACCCTGGTGGTTCCATCGCTTCGAGACGCTCAGCAACCACTTCAT
CGAGCTCCTGGTGCCCTTCTTCCTCTTCCTCGGCCGGCGGGCGTGCATCATCCACGGGGTGCTGCAGATCCTGTTCCAGGCCGTCCTCAT
CGTCAGCGGGAACCTCAGCTTCCTGAACTGGCTGACTATGGTGCCCAGCCTGGCCTGCTTTGATGACGCCACCCTGGGATTCTTGTTCCC
CTCTGGGCCAGGCAGCCTGAAGGACCGAGTTCTGCAGATGCAGAGGGACATCCGAGGGGCCCGGCCCGAGCCCAGATTCGGCTCCGTGGT
GCGGCGTGCAGCCAACGTCTCGCTGGGCGTCCTGCTGGCCTGGCTCAGCGTGCCCGTGGTCCTCAACTTGCTGAGCTCCAGGCAGGTCAT
GAACACCCACTTCAACTCTCTTCACATCGTCAACACTTACGGGGCCTTCGGAAGCATCACCAAGGAGCGGGCGGAGGTGATCCTGCAGGG
CACAGCCAGCTCCAACGCCAGCGCCCCCGATGCCATGTGGGAGGACTACGAGTTCAAGTGCAAGCCAGGTGACCCCAGCAGACGGCCCTG
CCTCATCTCCCCGTACCACTACCGCCTGGACTGGCTGATGTGGTTCGCGGCCTTCCAGACCTACGAGCACAACGACTGGATCATCCACCT
GGCTGGCAAGCTCCTGGCCAGCGACGCCGAGGCCTTGTCCCTGCTGGCACACAACCCCTTCGCGGGCAGGCCCCCGCCCAGGTGGGTCCG
AGGAGAGCACTACAGGTACAAGTTCAGCCGTCCTGGGGGCAGGCACGCCGCCGAGGGCAAGTGGTGGGTGCGGAAGAGGATCGGAGCCTA
CTTCCCTCCGCTCAGCCTGGAGGAGCTGAGGCCCTACTTCAGGGACCGTGGGTGGCCTCTGCCCGGGCCCCTCTAGACGTGCACCAGAAA
TAAAGGCGAAGACCCAGCCCCTCGGCGGCTCAGCAACGTTTGCCCTTCCCTGCGCCCAGCCCAAGCTGGGCATCGCCAAGAGAGACGTGG
AGAGGAGAGCGGTGGGACCCAGCCCCCAGCACGGGGGTCCAGGGTGGGGTCTGTTGTCACATACTGTGGCGGCTCCCAGGCCCTGCCCAC
CTGGGGCCCCACATCCAGGCCAACCCTTGTCCCAGGCGCCAGGGGCTCTGATCTCCCATCCATCCCACCCTCCTCCCAGAGGCCCAGCCT
GGGGCTGTGCCGCCCACAGGAGTTGAGACAATGGCCATCCTGACACCTTCCTCCACTACAGCCCTGACCATAGACCCAGCCAGGTAGCTC
TTGGGGTCTCTAGCGTCCCAGGGCCTGGTTTCTGTTCCCTCTTCAATGGTGTGTTCCCAGCCAGGTCCTGACCCTCAGAGCCAAGTCCCT
GTCACGTCTGGGGCAGCCAAACCCTCGCCCCACAGGGACCTGGACACGCCCGGCCAGGATGTGGGGTTGGATGGGCCATTTTCTGTCCTA
TCCCTCATCTCCACCCCCGCCACAGCCTACACGCATCCCACACATGCAGGCACACACAGCCTGTGCACACATGTGTTCTTGGCCCGGTTT
CATCCCCCCATGACTGGTGTCTGTGAGGTGCAGATGGACACAGCGCACACCCAGACCCTCCACCAGGCTGTGACCTCGCTGCCTCTGAGG
CCTTGACAAGGCCCCTCAATCGGAGGACAGCCGGCCGTGCACACTTTCATCATCGTCGGACAAACAGCGTCTACTGCACATTTTTCTTAT

>In-frame_ENST00000396410_ENST00000262301_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(amino acids)=562AA_start in transcript=97_stop in transcript=1785
MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEDEEPQSPRIQNIGEQGH
MALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSA
AARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMGLIKIRGDRCWRDLTCMDFHYETQPMPNPVAYYLHHSPWWFHRFETLSNHFIEL
LVPFFLFLGRRACIIHGVLQILFQAVLIVSGNLSFLNWLTMVPSLACFDDATLGFLFPSGPGSLKDRVLQMQRDIRGARPEPRFGSVVRR
AANVSLGVLLAWLSVPVVLNLLSSRQVMNTHFNSLHIVNTYGAFGSITKERAEVILQGTASSNASAPDAMWEDYEFKCKPGDPSRRPCLI
SPYHYRLDWLMWFAAFQTYEHNDWIIHLAGKLLASDAEALSLLAHNPFAGRPPPRWVRGEHYRYKFSRPGGRHAAEGKWWVRKRIGAYFP

--------------------------------------------------------------
>In-frame_ENST00000396410_ENST00000399843_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(transcript)=2680nt_BP=745nt
CGGGGGACGTCAGCGCTGCCAGCGTGGAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTAGAGCCCGGGACCGCCAGGCCACCACCGGCCGC
CTCAGCCATGGACGCGTCCCTGGAGAAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGA
GGACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGTGGGCAAGATAT
GGTGAGCATCCTCCAGTTAGTTCAGAATCTCATGCATGGAGATGAAGATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTGGAGAACA
AGGTCATATGGCTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATACT
TTCAGATACCACCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAA
GATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATCT
TAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACAC
TGTGTTTGGATCCCAGCATCAGATGGGCCTGATCAAGATCCGGGGGGACCGGTGCTGGCGAGACCTCACCTGCATGGACTTCCACTATGA
GACCCAGCCGATGCCCAATCCTGTGGCGTACTACCTGCACCACTCACCCTGGTGGTTCCATCGCTTCGAGACGCTCAGCAACCACTTCAT
CGAGCTCCTGGTGCCCTTCTTCCTCTTCCTCGGCCGGCGGGCGTGCATCATCCACGGGGTGCTGCAGATCCTGTTCCAGGCCGTCCTCAT
CGTCAGCGGGAACCTCAGCTTCCTGAACTGGCTGACTATGGTGCCCAGCCTGGCCTGCTTTGATGACGCCACCCTGGGATTCTTGTTCCC
CTCTGGGCCAGGCAGCCTGAAGGACCGAGTTCTGCAGATGCAGAGGGACATCCGAGGGGCCCGGCCCGAGCCCAGATTCGGCTCCGTGGT
GCGGCGTGCAGCCAACGTCTCGCTGGGCGTCCTGCTGGCCTGGCTCAGCGTGCCCGTGGTCCTCAACTTGCTGAGCTCCAGGCAGGTCAT
GAACACCCACTTCAACTCTCTTCACATCGTCAACACTTACGGGGCCTTCGGAAGCATCACCAAGGAGCGGGCGGAGGTGATCCTGCAGGG
CACAGCCAGCTCCAACGCCAGCGCCCCCGATGCCATGTGGGAGGACTACGAGTTCAAGTGCAAGCCAGGTGACCCCAGCAGACGGCCCTG
CCTCATCTCCCCGTACCACTACCGCCTGGACTGGCTGATGTGGTTCGCGGCCTTCCAGACCTACGAGCACAACGACTGGATCATCCACCT
GGCTGGCAAGCTCCTGGCCAGCGACGCCGAGGCCTTGTCCCTGCTGGCACACAACCCCTTCGCGGGCAGGCCCCCGCCCAGGTGGGTCCG
AGGAGAGCACTACAGGTACAAGTTCAGCCGTCCTGGGGGCAGGCACGCCGCCGAGGGCAAGTGGTGGGTGCGGAAGAGGATCGGAGCCTA
CTTCCCTCCGCTCAGCCTGGAGGAGCTGAGGCCCTACTTCAGGGACCGTGGGTGGCCTCTGCCCGGGCCCCTCTAGACGTGCACCAGAAA
TAAAGGCGAAGACCCAGCCCCTCGGCGGCTCAGCAACGTTTGCCCTTCCCTGCGCCCAGCCCAAGCTGGGCATCGCCAAGAGAGACGTGG
AGAGGAGAGCGGTGGGACCCAGCCCCCAGCACGGGGGTCCAGGGTGGGGTCTGTTGTCACATACTGTGGCGGCTCCCAGGCCCTGCCCAC
CTGGGGCCCCACATCCAGGCCAACCCTTGTCCCAGGCGCCAGGGGCTCTGATCTCCCATCCATCCCACCCTCCTCCCAGAGGCCCAGCCT
GGGGCTGTGCCGCCCACAGGAGTTGAGACAATGGCCATCCTGACACCTTCCTCCACTACAGCCCTGACCATAGACCCAGCCAGGTAGCTC
TTGGGGTCTCTAGCGTCCCAGGGCCTGGTTTCTGTTCCCTCTTCAATGGTGTGTTCCCAGCCAGGTCCTGACCCTCAGAGCCAAGTCCCT
GTCACGTCTGGGGCAGCCAAACCCTCGCCCCACAGGGACCTGGACACGCCCGGCCAGGATGTGGGGTTGGATGGGCCATTTTCTGTCCTA
TCCCTCATCTCCACCCCCGCCACAGCCTACACGCATCCCACACATGCAGGCACACACAGCCTGTGCACACATGTGTTCTTGGCCCGGTTT
CATCCCCCCATGACTGGTGTCTGTGAGGTGCAGATGGACACAGCGCACACCCAGACCCTCCACCAGGCTGTGACCTCGCTGCCTCTGAGG
CCTTGACAAGGCCCCTCAATCGGAGGACAGCCGGCCGTGCACACTTTCATCATCGTCGGACAAACAGCGTCTACTGCACATTTTTCTTAT

>In-frame_ENST00000396410_ENST00000399843_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(amino acids)=562AA_start in transcript=97_stop in transcript=1785
MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEDEEPQSPRIQNIGEQGH
MALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSA
AARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMGLIKIRGDRCWRDLTCMDFHYETQPMPNPVAYYLHHSPWWFHRFETLSNHFIEL
LVPFFLFLGRRACIIHGVLQILFQAVLIVSGNLSFLNWLTMVPSLACFDDATLGFLFPSGPGSLKDRVLQMQRDIRGARPEPRFGSVVRR
AANVSLGVLLAWLSVPVVLNLLSSRQVMNTHFNSLHIVNTYGAFGSITKERAEVILQGTASSNASAPDAMWEDYEFKCKPGDPSRRPCLI
SPYHYRLDWLMWFAAFQTYEHNDWIIHLAGKLLASDAEALSLLAHNPFAGRPPPRWVRGEHYRYKFSRPGGRHAAEGKWWVRKRIGAYFP

--------------------------------------------------------------
>In-frame_ENST00000569715_ENST00000262301_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(transcript)=2583nt_BP=644nt
AGCGTGGAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTAGAGCCCGGGACCGCCAGGCCACCACCGGCCGCCTCAGCCATGGACGCGTCCC
TGGAGAAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGAGGACAGTCAGAGAAGAACAG
AAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGAATCCAAAATATTGGAGAACAAGGTCATATGG
CTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATACTTTCAGATACCA
CCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGC
TTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTG
CTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACACTGTGTTTGGAT
CCCAGCATCAGATGGGCCTGATCAAGATCCGGGGGGACCGGTGCTGGCGAGACCTCACCTGCATGGACTTCCACTATGAGACCCAGCCGA
TGCCCAATCCTGTGGCGTACTACCTGCACCACTCACCCTGGTGGTTCCATCGCTTCGAGACGCTCAGCAACCACTTCATCGAGCTCCTGG
TGCCCTTCTTCCTCTTCCTCGGCCGGCGGGCGTGCATCATCCACGGGGTGCTGCAGATCCTGTTCCAGGCCGTCCTCATCGTCAGCGGGA
ACCTCAGCTTCCTGAACTGGCTGACTATGGTGCCCAGCCTGGCCTGCTTTGATGACGCCACCCTGGGATTCTTGTTCCCCTCTGGGCCAG
GCAGCCTGAAGGACCGAGTTCTGCAGATGCAGAGGGACATCCGAGGGGCCCGGCCCGAGCCCAGATTCGGCTCCGTGGTGCGGCGTGCAG
CCAACGTCTCGCTGGGCGTCCTGCTGGCCTGGCTCAGCGTGCCCGTGGTCCTCAACTTGCTGAGCTCCAGGCAGGTCATGAACACCCACT
TCAACTCTCTTCACATCGTCAACACTTACGGGGCCTTCGGAAGCATCACCAAGGAGCGGGCGGAGGTGATCCTGCAGGGCACAGCCAGCT
CCAACGCCAGCGCCCCCGATGCCATGTGGGAGGACTACGAGTTCAAGTGCAAGCCAGGTGACCCCAGCAGACGGCCCTGCCTCATCTCCC
CGTACCACTACCGCCTGGACTGGCTGATGTGGTTCGCGGCCTTCCAGACCTACGAGCACAACGACTGGATCATCCACCTGGCTGGCAAGC
TCCTGGCCAGCGACGCCGAGGCCTTGTCCCTGCTGGCACACAACCCCTTCGCGGGCAGGCCCCCGCCCAGGTGGGTCCGAGGAGAGCACT
ACAGGTACAAGTTCAGCCGTCCTGGGGGCAGGCACGCCGCCGAGGGCAAGTGGTGGGTGCGGAAGAGGATCGGAGCCTACTTCCCTCCGC
TCAGCCTGGAGGAGCTGAGGCCCTACTTCAGGGACCGTGGGTGGCCTCTGCCCGGGCCCCTCTAGACGTGCACCAGAAATAAAGGCGAAG
ACCCAGCCCCTCGGCGGCTCAGCAACGTTTGCCCTTCCCTGCGCCCAGCCCAAGCTGGGCATCGCCAAGAGAGACGTGGAGAGGAGAGCG
GTGGGACCCAGCCCCCAGCACGGGGGTCCAGGGTGGGGTCTGTTGTCACATACTGTGGCGGCTCCCAGGCCCTGCCCACCTGGGGCCCCA
CATCCAGGCCAACCCTTGTCCCAGGCGCCAGGGGCTCTGATCTCCCATCCATCCCACCCTCCTCCCAGAGGCCCAGCCTGGGGCTGTGCC
GCCCACAGGAGTTGAGACAATGGCCATCCTGACACCTTCCTCCACTACAGCCCTGACCATAGACCCAGCCAGGTAGCTCTTGGGGTCTCT
AGCGTCCCAGGGCCTGGTTTCTGTTCCCTCTTCAATGGTGTGTTCCCAGCCAGGTCCTGACCCTCAGAGCCAAGTCCCTGTCACGTCTGG
GGCAGCCAAACCCTCGCCCCACAGGGACCTGGACACGCCCGGCCAGGATGTGGGGTTGGATGGGCCATTTTCTGTCCTATCCCTCATCTC
CACCCCCGCCACAGCCTACACGCATCCCACACATGCAGGCACACACAGCCTGTGCACACATGTGTTCTTGGCCCGGTTTCATCCCCCCAT
GACTGGTGTCTGTGAGGTGCAGATGGACACAGCGCACACCCAGACCCTCCACCAGGCTGTGACCTCGCTGCCTCTGAGGCCTTGACAAGG
CCCCTCAATCGGAGGACAGCCGGCCGTGCACACTTTCATCATCGTCGGACAAACAGCGTCTACTGCACATTTTTCTTATTCCTATTCTTG

>In-frame_ENST00000569715_ENST00000262301_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(amino acids)=535AA_start in transcript=77_stop in transcript=1684
MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRI
LSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCN
TVFGSQHQMGLIKIRGDRCWRDLTCMDFHYETQPMPNPVAYYLHHSPWWFHRFETLSNHFIELLVPFFLFLGRRACIIHGVLQILFQAVL
IVSGNLSFLNWLTMVPSLACFDDATLGFLFPSGPGSLKDRVLQMQRDIRGARPEPRFGSVVRRAANVSLGVLLAWLSVPVVLNLLSSRQV
MNTHFNSLHIVNTYGAFGSITKERAEVILQGTASSNASAPDAMWEDYEFKCKPGDPSRRPCLISPYHYRLDWLMWFAAFQTYEHNDWIIH

--------------------------------------------------------------
>In-frame_ENST00000569715_ENST00000399843_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(transcript)=2579nt_BP=644nt
AGCGTGGAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTAGAGCCCGGGACCGCCAGGCCACCACCGGCCGCCTCAGCCATGGACGCGTCCC
TGGAGAAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGAGGACAGTCAGAGAAGAACAG
AAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGAATCCAAAATATTGGAGAACAAGGTCATATGG
CTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATACTTTCAGATACCA
CCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGC
TTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTG
CTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACACTGTGTTTGGAT
CCCAGCATCAGATGGGCCTGATCAAGATCCGGGGGGACCGGTGCTGGCGAGACCTCACCTGCATGGACTTCCACTATGAGACCCAGCCGA
TGCCCAATCCTGTGGCGTACTACCTGCACCACTCACCCTGGTGGTTCCATCGCTTCGAGACGCTCAGCAACCACTTCATCGAGCTCCTGG
TGCCCTTCTTCCTCTTCCTCGGCCGGCGGGCGTGCATCATCCACGGGGTGCTGCAGATCCTGTTCCAGGCCGTCCTCATCGTCAGCGGGA
ACCTCAGCTTCCTGAACTGGCTGACTATGGTGCCCAGCCTGGCCTGCTTTGATGACGCCACCCTGGGATTCTTGTTCCCCTCTGGGCCAG
GCAGCCTGAAGGACCGAGTTCTGCAGATGCAGAGGGACATCCGAGGGGCCCGGCCCGAGCCCAGATTCGGCTCCGTGGTGCGGCGTGCAG
CCAACGTCTCGCTGGGCGTCCTGCTGGCCTGGCTCAGCGTGCCCGTGGTCCTCAACTTGCTGAGCTCCAGGCAGGTCATGAACACCCACT
TCAACTCTCTTCACATCGTCAACACTTACGGGGCCTTCGGAAGCATCACCAAGGAGCGGGCGGAGGTGATCCTGCAGGGCACAGCCAGCT
CCAACGCCAGCGCCCCCGATGCCATGTGGGAGGACTACGAGTTCAAGTGCAAGCCAGGTGACCCCAGCAGACGGCCCTGCCTCATCTCCC
CGTACCACTACCGCCTGGACTGGCTGATGTGGTTCGCGGCCTTCCAGACCTACGAGCACAACGACTGGATCATCCACCTGGCTGGCAAGC
TCCTGGCCAGCGACGCCGAGGCCTTGTCCCTGCTGGCACACAACCCCTTCGCGGGCAGGCCCCCGCCCAGGTGGGTCCGAGGAGAGCACT
ACAGGTACAAGTTCAGCCGTCCTGGGGGCAGGCACGCCGCCGAGGGCAAGTGGTGGGTGCGGAAGAGGATCGGAGCCTACTTCCCTCCGC
TCAGCCTGGAGGAGCTGAGGCCCTACTTCAGGGACCGTGGGTGGCCTCTGCCCGGGCCCCTCTAGACGTGCACCAGAAATAAAGGCGAAG
ACCCAGCCCCTCGGCGGCTCAGCAACGTTTGCCCTTCCCTGCGCCCAGCCCAAGCTGGGCATCGCCAAGAGAGACGTGGAGAGGAGAGCG
GTGGGACCCAGCCCCCAGCACGGGGGTCCAGGGTGGGGTCTGTTGTCACATACTGTGGCGGCTCCCAGGCCCTGCCCACCTGGGGCCCCA
CATCCAGGCCAACCCTTGTCCCAGGCGCCAGGGGCTCTGATCTCCCATCCATCCCACCCTCCTCCCAGAGGCCCAGCCTGGGGCTGTGCC
GCCCACAGGAGTTGAGACAATGGCCATCCTGACACCTTCCTCCACTACAGCCCTGACCATAGACCCAGCCAGGTAGCTCTTGGGGTCTCT
AGCGTCCCAGGGCCTGGTTTCTGTTCCCTCTTCAATGGTGTGTTCCCAGCCAGGTCCTGACCCTCAGAGCCAAGTCCCTGTCACGTCTGG
GGCAGCCAAACCCTCGCCCCACAGGGACCTGGACACGCCCGGCCAGGATGTGGGGTTGGATGGGCCATTTTCTGTCCTATCCCTCATCTC
CACCCCCGCCACAGCCTACACGCATCCCACACATGCAGGCACACACAGCCTGTGCACACATGTGTTCTTGGCCCGGTTTCATCCCCCCAT
GACTGGTGTCTGTGAGGTGCAGATGGACACAGCGCACACCCAGACCCTCCACCAGGCTGTGACCTCGCTGCCTCTGAGGCCTTGACAAGG
CCCCTCAATCGGAGGACAGCCGGCCGTGCACACTTTCATCATCGTCGGACAAACAGCGTCTACTGCACATTTTTCTTATTCCTATTCTTG

>In-frame_ENST00000569715_ENST00000399843_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(amino acids)=535AA_start in transcript=77_stop in transcript=1684
MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRI
LSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCN
TVFGSQHQMGLIKIRGDRCWRDLTCMDFHYETQPMPNPVAYYLHHSPWWFHRFETLSNHFIELLVPFFLFLGRRACIIHGVLQILFQAVL
IVSGNLSFLNWLTMVPSLACFDDATLGFLFPSGPGSLKDRVLQMQRDIRGARPEPRFGSVVRRAANVSLGVLLAWLSVPVVLNLLSSRQV
MNTHFNSLHIVNTYGAFGSITKERAEVILQGTASSNASAPDAMWEDYEFKCKPGDPSRRPCLISPYHYRLDWLMWFAAFQTYEHNDWIIH

--------------------------------------------------------------
>In-frame_ENST00000450288_ENST00000262301_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(transcript)=2574nt_BP=635nt
GAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTAGAGCCCGGGACCGCCAGGCCACCACCGGCCGCCTCAGCCATGGACGCGTCCCTGGAGA
AGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGAGGACAGTCAGAGAACAGAAGAGGAAA
ATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGAATCCAAAATATTGGAGAACAAGGTCATATGGCTTTGTTGG
GACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATACTTTCAGATACCACCTTATGGC
TATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTC
ATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTGCTAGACCTG
GCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACACTGTGTTTGGATCCCAGCATC
AGATGGGCCTGATCAAGATCCGGGGGGACCGGTGCTGGCGAGACCTCACCTGCATGGACTTCCACTATGAGACCCAGCCGATGCCCAATC
CTGTGGCGTACTACCTGCACCACTCACCCTGGTGGTTCCATCGCTTCGAGACGCTCAGCAACCACTTCATCGAGCTCCTGGTGCCCTTCT
TCCTCTTCCTCGGCCGGCGGGCGTGCATCATCCACGGGGTGCTGCAGATCCTGTTCCAGGCCGTCCTCATCGTCAGCGGGAACCTCAGCT
TCCTGAACTGGCTGACTATGGTGCCCAGCCTGGCCTGCTTTGATGACGCCACCCTGGGATTCTTGTTCCCCTCTGGGCCAGGCAGCCTGA
AGGACCGAGTTCTGCAGATGCAGAGGGACATCCGAGGGGCCCGGCCCGAGCCCAGATTCGGCTCCGTGGTGCGGCGTGCAGCCAACGTCT
CGCTGGGCGTCCTGCTGGCCTGGCTCAGCGTGCCCGTGGTCCTCAACTTGCTGAGCTCCAGGCAGGTCATGAACACCCACTTCAACTCTC
TTCACATCGTCAACACTTACGGGGCCTTCGGAAGCATCACCAAGGAGCGGGCGGAGGTGATCCTGCAGGGCACAGCCAGCTCCAACGCCA
GCGCCCCCGATGCCATGTGGGAGGACTACGAGTTCAAGTGCAAGCCAGGTGACCCCAGCAGACGGCCCTGCCTCATCTCCCCGTACCACT
ACCGCCTGGACTGGCTGATGTGGTTCGCGGCCTTCCAGACCTACGAGCACAACGACTGGATCATCCACCTGGCTGGCAAGCTCCTGGCCA
GCGACGCCGAGGCCTTGTCCCTGCTGGCACACAACCCCTTCGCGGGCAGGCCCCCGCCCAGGTGGGTCCGAGGAGAGCACTACAGGTACA
AGTTCAGCCGTCCTGGGGGCAGGCACGCCGCCGAGGGCAAGTGGTGGGTGCGGAAGAGGATCGGAGCCTACTTCCCTCCGCTCAGCCTGG
AGGAGCTGAGGCCCTACTTCAGGGACCGTGGGTGGCCTCTGCCCGGGCCCCTCTAGACGTGCACCAGAAATAAAGGCGAAGACCCAGCCC
CTCGGCGGCTCAGCAACGTTTGCCCTTCCCTGCGCCCAGCCCAAGCTGGGCATCGCCAAGAGAGACGTGGAGAGGAGAGCGGTGGGACCC
AGCCCCCAGCACGGGGGTCCAGGGTGGGGTCTGTTGTCACATACTGTGGCGGCTCCCAGGCCCTGCCCACCTGGGGCCCCACATCCAGGC
CAACCCTTGTCCCAGGCGCCAGGGGCTCTGATCTCCCATCCATCCCACCCTCCTCCCAGAGGCCCAGCCTGGGGCTGTGCCGCCCACAGG
AGTTGAGACAATGGCCATCCTGACACCTTCCTCCACTACAGCCCTGACCATAGACCCAGCCAGGTAGCTCTTGGGGTCTCTAGCGTCCCA
GGGCCTGGTTTCTGTTCCCTCTTCAATGGTGTGTTCCCAGCCAGGTCCTGACCCTCAGAGCCAAGTCCCTGTCACGTCTGGGGCAGCCAA
ACCCTCGCCCCACAGGGACCTGGACACGCCCGGCCAGGATGTGGGGTTGGATGGGCCATTTTCTGTCCTATCCCTCATCTCCACCCCCGC
CACAGCCTACACGCATCCCACACATGCAGGCACACACAGCCTGTGCACACATGTGTTCTTGGCCCGGTTTCATCCCCCCATGACTGGTGT
CTGTGAGGTGCAGATGGACACAGCGCACACCCAGACCCTCCACCAGGCTGTGACCTCGCTGCCTCTGAGGCCTTGACAAGGCCCCTCAAT
CGGAGGACAGCCGGCCGTGCACACTTTCATCATCGTCGGACAAACAGCGTCTACTGCACATTTTTCTTATTCCTATTCTTGAGCCATAGC

>In-frame_ENST00000450288_ENST00000262301_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(amino acids)=534AA_start in transcript=71_stop in transcript=1675
MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRTEEENGKKLISGDIPGPLQGRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRIL
SDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNT
VFGSQHQMGLIKIRGDRCWRDLTCMDFHYETQPMPNPVAYYLHHSPWWFHRFETLSNHFIELLVPFFLFLGRRACIIHGVLQILFQAVLI
VSGNLSFLNWLTMVPSLACFDDATLGFLFPSGPGSLKDRVLQMQRDIRGARPEPRFGSVVRRAANVSLGVLLAWLSVPVVLNLLSSRQVM
NTHFNSLHIVNTYGAFGSITKERAEVILQGTASSNASAPDAMWEDYEFKCKPGDPSRRPCLISPYHYRLDWLMWFAAFQTYEHNDWIIHL

--------------------------------------------------------------
>In-frame_ENST00000450288_ENST00000399843_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(transcript)=2570nt_BP=635nt
GAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTAGAGCCCGGGACCGCCAGGCCACCACCGGCCGCCTCAGCCATGGACGCGTCCCTGGAGA
AGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGAGGACAGTCAGAGAACAGAAGAGGAAA
ATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGAATCCAAAATATTGGAGAACAAGGTCATATGGCTTTGTTGG
GACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATACTTTCAGATACCACCTTATGGC
TATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTC
ATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTGCTAGACCTG
GCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACACTGTGTTTGGATCCCAGCATC
AGATGGGCCTGATCAAGATCCGGGGGGACCGGTGCTGGCGAGACCTCACCTGCATGGACTTCCACTATGAGACCCAGCCGATGCCCAATC
CTGTGGCGTACTACCTGCACCACTCACCCTGGTGGTTCCATCGCTTCGAGACGCTCAGCAACCACTTCATCGAGCTCCTGGTGCCCTTCT
TCCTCTTCCTCGGCCGGCGGGCGTGCATCATCCACGGGGTGCTGCAGATCCTGTTCCAGGCCGTCCTCATCGTCAGCGGGAACCTCAGCT
TCCTGAACTGGCTGACTATGGTGCCCAGCCTGGCCTGCTTTGATGACGCCACCCTGGGATTCTTGTTCCCCTCTGGGCCAGGCAGCCTGA
AGGACCGAGTTCTGCAGATGCAGAGGGACATCCGAGGGGCCCGGCCCGAGCCCAGATTCGGCTCCGTGGTGCGGCGTGCAGCCAACGTCT
CGCTGGGCGTCCTGCTGGCCTGGCTCAGCGTGCCCGTGGTCCTCAACTTGCTGAGCTCCAGGCAGGTCATGAACACCCACTTCAACTCTC
TTCACATCGTCAACACTTACGGGGCCTTCGGAAGCATCACCAAGGAGCGGGCGGAGGTGATCCTGCAGGGCACAGCCAGCTCCAACGCCA
GCGCCCCCGATGCCATGTGGGAGGACTACGAGTTCAAGTGCAAGCCAGGTGACCCCAGCAGACGGCCCTGCCTCATCTCCCCGTACCACT
ACCGCCTGGACTGGCTGATGTGGTTCGCGGCCTTCCAGACCTACGAGCACAACGACTGGATCATCCACCTGGCTGGCAAGCTCCTGGCCA
GCGACGCCGAGGCCTTGTCCCTGCTGGCACACAACCCCTTCGCGGGCAGGCCCCCGCCCAGGTGGGTCCGAGGAGAGCACTACAGGTACA
AGTTCAGCCGTCCTGGGGGCAGGCACGCCGCCGAGGGCAAGTGGTGGGTGCGGAAGAGGATCGGAGCCTACTTCCCTCCGCTCAGCCTGG
AGGAGCTGAGGCCCTACTTCAGGGACCGTGGGTGGCCTCTGCCCGGGCCCCTCTAGACGTGCACCAGAAATAAAGGCGAAGACCCAGCCC
CTCGGCGGCTCAGCAACGTTTGCCCTTCCCTGCGCCCAGCCCAAGCTGGGCATCGCCAAGAGAGACGTGGAGAGGAGAGCGGTGGGACCC
AGCCCCCAGCACGGGGGTCCAGGGTGGGGTCTGTTGTCACATACTGTGGCGGCTCCCAGGCCCTGCCCACCTGGGGCCCCACATCCAGGC
CAACCCTTGTCCCAGGCGCCAGGGGCTCTGATCTCCCATCCATCCCACCCTCCTCCCAGAGGCCCAGCCTGGGGCTGTGCCGCCCACAGG
AGTTGAGACAATGGCCATCCTGACACCTTCCTCCACTACAGCCCTGACCATAGACCCAGCCAGGTAGCTCTTGGGGTCTCTAGCGTCCCA
GGGCCTGGTTTCTGTTCCCTCTTCAATGGTGTGTTCCCAGCCAGGTCCTGACCCTCAGAGCCAAGTCCCTGTCACGTCTGGGGCAGCCAA
ACCCTCGCCCCACAGGGACCTGGACACGCCCGGCCAGGATGTGGGGTTGGATGGGCCATTTTCTGTCCTATCCCTCATCTCCACCCCCGC
CACAGCCTACACGCATCCCACACATGCAGGCACACACAGCCTGTGCACACATGTGTTCTTGGCCCGGTTTCATCCCCCCATGACTGGTGT
CTGTGAGGTGCAGATGGACACAGCGCACACCCAGACCCTCCACCAGGCTGTGACCTCGCTGCCTCTGAGGCCTTGACAAGGCCCCTCAAT
CGGAGGACAGCCGGCCGTGCACACTTTCATCATCGTCGGACAAACAGCGTCTACTGCACATTTTTCTTATTCCTATTCTTGAGCCATAGC

>In-frame_ENST00000450288_ENST00000399843_TCGA-AN-A046-01A_PDXDC1_chr16_15102704_+_LMF1_chr16_943072_length(amino acids)=534AA_start in transcript=71_stop in transcript=1675
MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRTEEENGKKLISGDIPGPLQGRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRIL
SDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNT
VFGSQHQMGLIKIRGDRCWRDLTCMDFHYETQPMPNPVAYYLHHSPWWFHRFETLSNHFIELLVPFFLFLGRRACIIHGVLQILFQAVLI
VSGNLSFLNWLTMVPSLACFDDATLGFLFPSGPGSLKDRVLQMQRDIRGARPEPRFGSVVRRAANVSLGVLLAWLSVPVVLNLLSSRQVM
NTHFNSLHIVNTYGAFGSITKERAEVILQGTASSNASAPDAMWEDYEFKCKPGDPSRRPCLISPYHYRLDWLMWFAAFQTYEHNDWIIHL

--------------------------------------------------------------

Top

Fusion Gene PPI Analysis for PDXDC1-LMF1


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

Related Drugs for PDXDC1-LMF1


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

Related Diseases for PDXDC1-LMF1


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgenePDXDC1C0007134Renal Cell Carcinoma1CTD_human
HgenePDXDC1C0279702Conventional (Clear Cell) Renal Cell Carcinoma1CTD_human
HgenePDXDC1C1266042Chromophobe Renal Cell Carcinoma1CTD_human
HgenePDXDC1C1266043Sarcomatoid Renal Cell Carcinoma1CTD_human
HgenePDXDC1C1266044Collecting Duct Carcinoma of the Kidney1CTD_human
HgenePDXDC1C1306837Papillary Renal Cell Carcinoma1CTD_human
TgeneLMF1C1855498Lipase deficiency combined3CTD_human;GENOMICS_ENGLAND;ORPHANET
TgeneLMF1C0020557Hypertriglyceridemia1CTD_human