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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:PDXDC1-SNF8 (FusionGDB2 ID:63707)

Fusion Gene Summary for PDXDC1-SNF8

check button Fusion gene summary
Fusion gene informationFusion gene name: PDXDC1-SNF8
Fusion gene ID: 63707
HgeneTgene
Gene symbol

PDXDC1

SNF8

Gene ID

23042

11267

Gene namepyridoxal dependent decarboxylase domain containing 1SNF8 subunit of ESCRT-II
SynonymsLP8165Dot3|EAP30|VPS22
Cytomap

16p13.11

17q21.32

Type of geneprotein-codingprotein-coding
Descriptionpyridoxal-dependent decarboxylase domain-containing protein 1vacuolar-sorting protein SNF8EAP30 subunit of ELL complexELL-associated protein of 30 kDaESCRT-II complex subunit VPS22SNF8, ESCRT-II complex subunit, homolog
Modification date2020031320200327
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000563679, ENST00000325823, 
ENST00000447912, ENST00000535621, 
ENST00000455313, ENST00000396410, 
ENST00000569715, ENST00000450288, 
ENST00000502492, ENST00000290330, 
ENST00000514089, 
Fusion gene scores* DoF score24 X 21 X 12=60486 X 5 X 5=150
# samples 2710
** MAII scorelog2(27/6048*10)=-4.48542682717024
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(10/150*10)=-0.584962500721156
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: PDXDC1 [Title/Abstract] AND SNF8 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointPDXDC1(15123913)-SNF8(47014486), # samples:2
Anticipated loss of major functional domain due to fusion event.PDXDC1-SNF8 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneSNF8

GO:0006357

regulation of transcription by RNA polymerase II

10419521


check buttonFusion gene breakpoints across PDXDC1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across SNF8 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4PRADTCGA-J4-A67RPDXDC1chr16

15123913

+SNF8chr17

47014486

-
ChimerDB4PRADTCGA-J4-A67RPDXDC1chr16

15123913

+SNF8chr17

47014486

-


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Fusion Gene ORF analysis for PDXDC1-SNF8

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000563679ENST00000502492PDXDC1chr16

15123913

+SNF8chr17

47014486

-
In-frameENST00000563679ENST00000290330PDXDC1chr16

15123913

+SNF8chr17

47014486

-
Frame-shiftENST00000563679ENST00000514089PDXDC1chr16

15123913

+SNF8chr17

47014486

-
In-frameENST00000325823ENST00000502492PDXDC1chr16

15123913

+SNF8chr17

47014486

-
In-frameENST00000325823ENST00000290330PDXDC1chr16

15123913

+SNF8chr17

47014486

-
Frame-shiftENST00000325823ENST00000514089PDXDC1chr16

15123913

+SNF8chr17

47014486

-
In-frameENST00000447912ENST00000502492PDXDC1chr16

15123913

+SNF8chr17

47014486

-
In-frameENST00000447912ENST00000290330PDXDC1chr16

15123913

+SNF8chr17

47014486

-
Frame-shiftENST00000447912ENST00000514089PDXDC1chr16

15123913

+SNF8chr17

47014486

-
In-frameENST00000535621ENST00000502492PDXDC1chr16

15123913

+SNF8chr17

47014486

-
In-frameENST00000535621ENST00000290330PDXDC1chr16

15123913

+SNF8chr17

47014486

-
Frame-shiftENST00000535621ENST00000514089PDXDC1chr16

15123913

+SNF8chr17

47014486

-
intron-3CDSENST00000455313ENST00000502492PDXDC1chr16

15123913

+SNF8chr17

47014486

-
intron-3CDSENST00000455313ENST00000290330PDXDC1chr16

15123913

+SNF8chr17

47014486

-
intron-3CDSENST00000455313ENST00000514089PDXDC1chr16

15123913

+SNF8chr17

47014486

-
In-frameENST00000396410ENST00000502492PDXDC1chr16

15123913

+SNF8chr17

47014486

-
In-frameENST00000396410ENST00000290330PDXDC1chr16

15123913

+SNF8chr17

47014486

-
Frame-shiftENST00000396410ENST00000514089PDXDC1chr16

15123913

+SNF8chr17

47014486

-
In-frameENST00000569715ENST00000502492PDXDC1chr16

15123913

+SNF8chr17

47014486

-
In-frameENST00000569715ENST00000290330PDXDC1chr16

15123913

+SNF8chr17

47014486

-
Frame-shiftENST00000569715ENST00000514089PDXDC1chr16

15123913

+SNF8chr17

47014486

-
In-frameENST00000450288ENST00000502492PDXDC1chr16

15123913

+SNF8chr17

47014486

-
In-frameENST00000450288ENST00000290330PDXDC1chr16

15123913

+SNF8chr17

47014486

-
Frame-shiftENST00000450288ENST00000514089PDXDC1chr16

15123913

+SNF8chr17

47014486

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000563679PDXDC1chr1615123913+ENST00000502492SNF8chr1747014486-328415921092124671
ENST00000563679PDXDC1chr1615123913+ENST00000290330SNF8chr1747014486-222315921092121670
ENST00000325823PDXDC1chr1615123913+ENST00000502492SNF8chr1747014486-31331441871973628
ENST00000325823PDXDC1chr1615123913+ENST00000290330SNF8chr1747014486-20721441871970627
ENST00000447912PDXDC1chr1615123913+ENST00000502492SNF8chr1747014486-313814462661978570
ENST00000447912PDXDC1chr1615123913+ENST00000290330SNF8chr1747014486-207714462661975569
ENST00000535621PDXDC1chr1615123913+ENST00000502492SNF8chr1747014486-32791587502119689
ENST00000535621PDXDC1chr1615123913+ENST00000290330SNF8chr1747014486-22181587502116688
ENST00000396410PDXDC1chr1615123913+ENST00000502492SNF8chr1747014486-31881496972028643
ENST00000396410PDXDC1chr1615123913+ENST00000290330SNF8chr1747014486-21271496972025642
ENST00000569715PDXDC1chr1615123913+ENST00000502492SNF8chr1747014486-30871395771927616
ENST00000569715PDXDC1chr1615123913+ENST00000290330SNF8chr1747014486-20261395771924615
ENST00000450288PDXDC1chr1615123913+ENST00000502492SNF8chr1747014486-30781386711918615
ENST00000450288PDXDC1chr1615123913+ENST00000290330SNF8chr1747014486-20171386711915614

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000563679ENST00000502492PDXDC1chr1615123913+SNF8chr1747014486-0.0015125380.9984875
ENST00000563679ENST00000290330PDXDC1chr1615123913+SNF8chr1747014486-0.0031077640.9968923
ENST00000325823ENST00000502492PDXDC1chr1615123913+SNF8chr1747014486-0.0021002190.9978998
ENST00000325823ENST00000290330PDXDC1chr1615123913+SNF8chr1747014486-0.0040046890.9959953
ENST00000447912ENST00000502492PDXDC1chr1615123913+SNF8chr1747014486-0.002823770.9971762
ENST00000447912ENST00000290330PDXDC1chr1615123913+SNF8chr1747014486-0.0042927020.9957073
ENST00000535621ENST00000502492PDXDC1chr1615123913+SNF8chr1747014486-0.0045026530.99549735
ENST00000535621ENST00000290330PDXDC1chr1615123913+SNF8chr1747014486-0.0083417250.9916583
ENST00000396410ENST00000502492PDXDC1chr1615123913+SNF8chr1747014486-0.0041005030.9958995
ENST00000396410ENST00000290330PDXDC1chr1615123913+SNF8chr1747014486-0.0076647140.99233526
ENST00000569715ENST00000502492PDXDC1chr1615123913+SNF8chr1747014486-0.0015599470.9984401
ENST00000569715ENST00000290330PDXDC1chr1615123913+SNF8chr1747014486-0.0034524280.99654764
ENST00000450288ENST00000502492PDXDC1chr1615123913+SNF8chr1747014486-0.0022183340.9977817
ENST00000450288ENST00000290330PDXDC1chr1615123913+SNF8chr1747014486-0.0045035420.9954965

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Fusion Genomic Features for PDXDC1-SNF8


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for PDXDC1-SNF8


check button Go to

FGviewer for the breakpoints of chr16:15123913-chr17:47014486

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneSNF8chr16:15123913chr17:47014486ENST000002903302827_5381.33333333333333258.0Coiled coilOntology_term=ECO:0000255
TgeneSNF8chr16:15123913chr17:47014486ENST000005024922827_5381.33333333333333259.0Coiled coilOntology_term=ECO:0000255


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Fusion Gene Sequence for PDXDC1-SNF8


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000563679_ENST00000502492_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(transcript)=3284nt_BP=1592nt
AGCTTAGATCAGTGCCTTCTCTGAACAGCGTTCACTAAGCAGCCCCCAACCCCAAAACCCCCAAGTCCCCGGGCGCCGAGGACGCTGCGA
GTCCTGCGCATGCGCAAGGTTGCCCACTCGCTCACCGCCTCCTTGGCGAATGGCCTGTTCCATTCTCGAGGGATGCCGGCGGGAGGTGAG
GCGGGAGACTTGGAAGCCTGGGCCCGGAAGTGAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGAT
GCTGGAGGACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGTGGGCA
AGATATGGTGAGCATCCTCCAGTTAGTTCAGAATCTCATGCATGGAGATGAAGATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTGG
AGAACAAGGTCATATGGCTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAG
GATACTTTCAGATACCACCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACT
TGCAAAGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCAT
ATATCTTAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTG
TAACACTGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTTCCTGGAGAAACTGATTAAAGATGATATAGAGCGAGGAAGACTGCCCCT
GTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTAGGACACACAGACAAGATTGGGAGATTGAAAGAACTCTGTGAGCAGTATGGCATATG
GCTTCATGTGGAGGGTGTGAATCTGGCAACATTGGCTCTGGGTTATGTCTCCTCATCAGTGCTGGCTGCAGCCAAATGTGATAGCATGAC
GATGACTCCTGGCCCGTGGCTGGGTTTGCCAGCTGTTCCTGCGGTGACACTGTATAAACACGATGACCCTGCCTTGACTTTAGTTGCTGG
TCTTACATCAAATAAGCCCACAGACAAACTCCGTGCCCTGCCTCTGTGGTTATCTTTACAATACTTGGGACTTGATGGGTTTGTGGAGAG
GATCAAGCATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGTTTGAAGAAAGTGAATTACATCAAAATCTTGGTGGAAGATGAGCTCAG
CTCCCCAGTGGTGGTGTTCAGATTTTTCCAGGAATTACCAGGCTCAGATCCGGTGTTTAAAGCCGTCCCAGTGCCCAACATGACACCTTC
AGGAGTCGGCCGGGAGAGGCACTCGTGTGACGCGCTGAATCGCTGGCTGGGAGAACAGCTGAAGCAGCTGGTGCCTGCAAGCGGCCTCAC
AGTCATGGATCTGGAAGCTGAGGGCACGTGTTTGCGGTTCAGCCCTTTGATGACCGCAGCAGCTGGAAAAGGATTTTGGTCTGAGATGCT
GGGCGTGGGGGACTTCTATTACGAACTAGGTGTCCAAATTATCGAAGTGTGCCTGGCGCTGAAGCATCGGAATGGAGGTCTGATAACTTT
GGAGGAACTACATCAACAGGTGTTGAAGGGAAGGGGCAAGTTCGCCCAGGATGTCAGTCAAGATGACCTGATCAGAGCCATCAAGAAACT
AAAGGCACTTGGCACTGGCTTCGGCATCATCCCTGTGGGCGGCACTTACCTCATTCAGTCTGTTCCAGCTGAGCTCAATATGGATCACAC
CGTGGTGCTGCAGCTGGCAGAGAAGAATGGCTACGTGACTGTCAGTGAGATCAAAGCCAGTCTTAAATGGGAGACCGAGCGAGCGCGGCA
AGTGCTGGAACACCTGCTGAAGGAAGGGTTGGCGTGGCTGGACTTACAGGCCCCAGGGGAGGCCCACTACTGGCTGCCAGCTCTCTTCAC
TGACCTCTACTCCCAGGAGATTACAGCTGAGGAGGCCAGAGAAGCCCTCCCCTGACTGCATGTGGAAGGGCACACAGCAGCAGGCAGGGA
GGAGGCGGAGGTGGCAAATAAACCTGGGCAATTTTGTTTATACAAAAAATAGAAAAAAAGTTCCAAGTTTTTCTTTCTTCCCTCATTCTT
TTATTTTTGAAAAGTGCCTTCACGTTGCATTTTTATTGGAGGAAAACCTCGCTCGTTCAGTAAGCATAATCTGATTAACACAGAGAACGG
CAAGCACATATAAAATGATTTTTGTAGGTCATCTGCAAGTTCATGGAAGAGCTGGGCCTAGAATGTGGGTTGTTTCCTGGCCTGTCTAGT
CTTTGTAGCTGTGAGACATAGATTACAGCCTATGCTAATTCAAACCTTTTAAATAAAATGTTCCTTATCTCAAACTAGCTGGTCCTAATG
GACCAGTAAATAATATTCACTTTCAGTCTCTTCTGGCTTCCTCTGTAGAGGCTCTAGGTTATGACAGAGTTAGCTGTGAGTATGAAGGAA
ATAGAAGTCAATGTCCAATCGTGGCTAAATTGGAGGAAAGAAAACAATGGAATCTGAGGGGAATCAAACAATAGTTAGGGAATGTTCTAT
TTTCTTAAATTCCCTACTAGCTTTCTCACCCTCCTGTAGTGATTGCCAGGTCCCTCTAGCCTCAGTAGTGGGAAAGGGAGTCATTTACTG
AACACCTACCCTGTGCCATTTTACATACAGCTCACTTAAATTTCACCAAGTAGGCAGCCTTCAACATCACAGGTGATTCAATCAAAGTAA
TTTGCCAGGGGCCGCCAGCTTCAGCCGAGCTAAAGCTGGTGCCTAGGCCTATTAACCCGAGCCCATGCCTTCATGTATCACTGCATAGTA
CAGAATGGCAGCACATACTGTGTGTAGACATTTTTCTACACACGTGGTCAGCCAAGAGTAAAAGCCTCTGCATCAGAAAGCAAGAATCTC
CTATAGCAAGTAGAAGTGGTGATGAGGGAAGAGGCCAGAGTTGTTTAAGGCTCCCAAAGTCCTTATGGTCTAAAGGCTAAGATCCTAAAA
GTGCTAGTTTAGTACTGGAAATCTGAAAACTCAATGGTTTTTCCATACTGAGACCCTTCCTTTAGCAGGATATAGCCTGGGCCCATCTCT

>In-frame_ENST00000563679_ENST00000502492_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(amino acids)=671AA_start in transcript=109_stop in transcript=2124
MPTRSPPPWRMACSILEGCRREVRRETWKPGPGSEIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVSIL
QLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRL
AIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANA
GTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKP
TDKLRALPLWLSLQYLGLDGFVERIKHACQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGRER
HSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAAGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQ
VLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLL

--------------------------------------------------------------
>In-frame_ENST00000563679_ENST00000290330_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(transcript)=2223nt_BP=1592nt
AGCTTAGATCAGTGCCTTCTCTGAACAGCGTTCACTAAGCAGCCCCCAACCCCAAAACCCCCAAGTCCCCGGGCGCCGAGGACGCTGCGA
GTCCTGCGCATGCGCAAGGTTGCCCACTCGCTCACCGCCTCCTTGGCGAATGGCCTGTTCCATTCTCGAGGGATGCCGGCGGGAGGTGAG
GCGGGAGACTTGGAAGCCTGGGCCCGGAAGTGAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGAT
GCTGGAGGACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGTGGGCA
AGATATGGTGAGCATCCTCCAGTTAGTTCAGAATCTCATGCATGGAGATGAAGATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTGG
AGAACAAGGTCATATGGCTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAG
GATACTTTCAGATACCACCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACT
TGCAAAGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCAT
ATATCTTAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTG
TAACACTGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTTCCTGGAGAAACTGATTAAAGATGATATAGAGCGAGGAAGACTGCCCCT
GTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTAGGACACACAGACAAGATTGGGAGATTGAAAGAACTCTGTGAGCAGTATGGCATATG
GCTTCATGTGGAGGGTGTGAATCTGGCAACATTGGCTCTGGGTTATGTCTCCTCATCAGTGCTGGCTGCAGCCAAATGTGATAGCATGAC
GATGACTCCTGGCCCGTGGCTGGGTTTGCCAGCTGTTCCTGCGGTGACACTGTATAAACACGATGACCCTGCCTTGACTTTAGTTGCTGG
TCTTACATCAAATAAGCCCACAGACAAACTCCGTGCCCTGCCTCTGTGGTTATCTTTACAATACTTGGGACTTGATGGGTTTGTGGAGAG
GATCAAGCATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGTTTGAAGAAAGTGAATTACATCAAAATCTTGGTGGAAGATGAGCTCAG
CTCCCCAGTGGTGGTGTTCAGATTTTTCCAGGAATTACCAGGCTCAGATCCGGTGTTTAAAGCCGTCCCAGTGCCCAACATGACACCTTC
AGGAGTCGGCCGGGAGAGGCACTCGTGTGACGCGCTGAATCGCTGGCTGGGAGAACAGCTGAAGCAGCTGGTGCCTGCAAGCGGCCTCAC
AGTCATGGATCTGGAAGCTGAGGGCACGTGTTTGCGGTTCAGCCCTTTGATGACCGCAGCAGCTGGAAAAGGATTTTGGTCTGAGATGCT
GGGCGTGGGGGACTTCTATTACGAACTAGGTGTCCAAATTATCGAAGTGTGCCTGGCGCTGAAGCATCGGAATGGAGGTCTGATAACTTT
GGAGGAACTACATCAACAGGTGTTGAAGGGAAGGGGCAAGTTCGCCCAGGATGTCAGTCAAGATGACCTGATCAGAGCCATCAAGAAACT
AAAGGCACTTGGCACTGGCTTCGGCATCATCCCTGTGGGCGGCACTTACCTCATTCAGTCTGTTCCAGCTGAGCTCAATATGGATCACAC
CGTGGTGCTGCAGCTGGCAGAGAATGGCTACGTGACTGTCAGTGAGATCAAAGCCAGTCTTAAATGGGAGACCGAGCGAGCGCGGCAAGT
GCTGGAACACCTGCTGAAGGAAGGGTTGGCGTGGCTGGACTTACAGGCCCCAGGGGAGGCCCACTACTGGCTGCCAGCTCTCTTCACTGA
CCTCTACTCCCAGGAGATTACAGCTGAGGAGGCCAGAGAAGCCCTCCCCTGACTGCATGTGGAAGGGCACACAGCAGCAGGCAGGGAGGA

>In-frame_ENST00000563679_ENST00000290330_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(amino acids)=670AA_start in transcript=109_stop in transcript=2121
MPTRSPPPWRMACSILEGCRREVRRETWKPGPGSEIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVSIL
QLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRL
AIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANA
GTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKP
TDKLRALPLWLSLQYLGLDGFVERIKHACQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGRER
HSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAAGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQ
VLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAENGYVTVSEIKASLKWETERARQVLEHLLK

--------------------------------------------------------------
>In-frame_ENST00000325823_ENST00000502492_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(transcript)=3133nt_BP=1441nt
ATTCTCGAGGGATGCCGGCGGGAGGTGAGGCGGGAGACTTGGAAGCCTGGGCCCGGAAGTGAGATAGCAGACCCCACGTTAGCTGAAATG
GGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGAGGACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGAT
ATTCCAGGCCCACTCCAGGGCAGTGGGCAAGATATGGTGAGCATCCTCCAGTTAGTTCAGAATCTCATGCATGGAGATGAAGATGAGGAG
CCCCAGAGCCCCAGAATCCAAAATATTGGAGAACAAGGTCATATGGCTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGAC
AAAGAGAAGCTGAGAAAACTTACAACTAGGATACTTTCAGATACCACCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCT
TATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTC
AATGTGTTATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTG
CCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACACTGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTTCCTGGAGAAACTGATTAAA
GATGATATAGAGCGAGGAAGACTGCCCCTGTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTAGGACACACAGACAAGATTGGGAGATTG
AAAGAACTCTGTGAGCAGTATGGCATATGGCTTCATGTGGAGGGTGTGAATCTGGCAACATTGGCTCTGGGTTATGTCTCCTCATCAGTG
CTGGCTGCAGCCAAATGTGATAGCATGACGATGACTCCTGGCCCGTGGCTGGGTTTGCCAGCTGTTCCTGCGGTGACACTGTATAAACAC
GATGACCCTGCCTTGACTTTAGTTGCTGGTCTTACATCAAATAAGCCCACAGACAAACTCCGTGCCCTGCCTCTGTGGTTATCTTTACAA
TACTTGGGACTTGATGGGTTTGTGGAGAGGATCAAGCATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGTTTGAAGAAAGTGAATTAC
ATCAAAATCTTGGTGGAAGATGAGCTCAGCTCCCCAGTGGTGGTGTTCAGATTTTTCCAGGAATTACCAGGCTCAGATCCGGTGTTTAAA
GCCGTCCCAGTGCCCAACATGACACCTTCAGGAGTCGGCCGGGAGAGGCACTCGTGTGACGCGCTGAATCGCTGGCTGGGAGAACAGCTG
AAGCAGCTGGTGCCTGCAAGCGGCCTCACAGTCATGGATCTGGAAGCTGAGGGCACGTGTTTGCGGTTCAGCCCTTTGATGACCGCAGCA
GCTGGAAAAGGATTTTGGTCTGAGATGCTGGGCGTGGGGGACTTCTATTACGAACTAGGTGTCCAAATTATCGAAGTGTGCCTGGCGCTG
AAGCATCGGAATGGAGGTCTGATAACTTTGGAGGAACTACATCAACAGGTGTTGAAGGGAAGGGGCAAGTTCGCCCAGGATGTCAGTCAA
GATGACCTGATCAGAGCCATCAAGAAACTAAAGGCACTTGGCACTGGCTTCGGCATCATCCCTGTGGGCGGCACTTACCTCATTCAGTCT
GTTCCAGCTGAGCTCAATATGGATCACACCGTGGTGCTGCAGCTGGCAGAGAAGAATGGCTACGTGACTGTCAGTGAGATCAAAGCCAGT
CTTAAATGGGAGACCGAGCGAGCGCGGCAAGTGCTGGAACACCTGCTGAAGGAAGGGTTGGCGTGGCTGGACTTACAGGCCCCAGGGGAG
GCCCACTACTGGCTGCCAGCTCTCTTCACTGACCTCTACTCCCAGGAGATTACAGCTGAGGAGGCCAGAGAAGCCCTCCCCTGACTGCAT
GTGGAAGGGCACACAGCAGCAGGCAGGGAGGAGGCGGAGGTGGCAAATAAACCTGGGCAATTTTGTTTATACAAAAAATAGAAAAAAAGT
TCCAAGTTTTTCTTTCTTCCCTCATTCTTTTATTTTTGAAAAGTGCCTTCACGTTGCATTTTTATTGGAGGAAAACCTCGCTCGTTCAGT
AAGCATAATCTGATTAACACAGAGAACGGCAAGCACATATAAAATGATTTTTGTAGGTCATCTGCAAGTTCATGGAAGAGCTGGGCCTAG
AATGTGGGTTGTTTCCTGGCCTGTCTAGTCTTTGTAGCTGTGAGACATAGATTACAGCCTATGCTAATTCAAACCTTTTAAATAAAATGT
TCCTTATCTCAAACTAGCTGGTCCTAATGGACCAGTAAATAATATTCACTTTCAGTCTCTTCTGGCTTCCTCTGTAGAGGCTCTAGGTTA
TGACAGAGTTAGCTGTGAGTATGAAGGAAATAGAAGTCAATGTCCAATCGTGGCTAAATTGGAGGAAAGAAAACAATGGAATCTGAGGGG
AATCAAACAATAGTTAGGGAATGTTCTATTTTCTTAAATTCCCTACTAGCTTTCTCACCCTCCTGTAGTGATTGCCAGGTCCCTCTAGCC
TCAGTAGTGGGAAAGGGAGTCATTTACTGAACACCTACCCTGTGCCATTTTACATACAGCTCACTTAAATTTCACCAAGTAGGCAGCCTT
CAACATCACAGGTGATTCAATCAAAGTAATTTGCCAGGGGCCGCCAGCTTCAGCCGAGCTAAAGCTGGTGCCTAGGCCTATTAACCCGAG
CCCATGCCTTCATGTATCACTGCATAGTACAGAATGGCAGCACATACTGTGTGTAGACATTTTTCTACACACGTGGTCAGCCAAGAGTAA
AAGCCTCTGCATCAGAAAGCAAGAATCTCCTATAGCAAGTAGAAGTGGTGATGAGGGAAGAGGCCAGAGTTGTTTAAGGCTCCCAAAGTC
CTTATGGTCTAAAGGCTAAGATCCTAAAAGTGCTAGTTTAGTACTGGAAATCTGAAAACTCAATGGTTTTTCCATACTGAGACCCTTCCT

>In-frame_ENST00000325823_ENST00000502492_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(amino acids)=628AA_start in transcript=87_stop in transcript=1973
MGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTL
DKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLG
LPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSS
VLAAAKCDSMTMTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHACQLSQRLQESLKKVN
YIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTA
AAGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQ

--------------------------------------------------------------
>In-frame_ENST00000325823_ENST00000290330_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(transcript)=2072nt_BP=1441nt
ATTCTCGAGGGATGCCGGCGGGAGGTGAGGCGGGAGACTTGGAAGCCTGGGCCCGGAAGTGAGATAGCAGACCCCACGTTAGCTGAAATG
GGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGAGGACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGAT
ATTCCAGGCCCACTCCAGGGCAGTGGGCAAGATATGGTGAGCATCCTCCAGTTAGTTCAGAATCTCATGCATGGAGATGAAGATGAGGAG
CCCCAGAGCCCCAGAATCCAAAATATTGGAGAACAAGGTCATATGGCTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGAC
AAAGAGAAGCTGAGAAAACTTACAACTAGGATACTTTCAGATACCACCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCT
TATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTC
AATGTGTTATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTG
CCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACACTGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTTCCTGGAGAAACTGATTAAA
GATGATATAGAGCGAGGAAGACTGCCCCTGTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTAGGACACACAGACAAGATTGGGAGATTG
AAAGAACTCTGTGAGCAGTATGGCATATGGCTTCATGTGGAGGGTGTGAATCTGGCAACATTGGCTCTGGGTTATGTCTCCTCATCAGTG
CTGGCTGCAGCCAAATGTGATAGCATGACGATGACTCCTGGCCCGTGGCTGGGTTTGCCAGCTGTTCCTGCGGTGACACTGTATAAACAC
GATGACCCTGCCTTGACTTTAGTTGCTGGTCTTACATCAAATAAGCCCACAGACAAACTCCGTGCCCTGCCTCTGTGGTTATCTTTACAA
TACTTGGGACTTGATGGGTTTGTGGAGAGGATCAAGCATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGTTTGAAGAAAGTGAATTAC
ATCAAAATCTTGGTGGAAGATGAGCTCAGCTCCCCAGTGGTGGTGTTCAGATTTTTCCAGGAATTACCAGGCTCAGATCCGGTGTTTAAA
GCCGTCCCAGTGCCCAACATGACACCTTCAGGAGTCGGCCGGGAGAGGCACTCGTGTGACGCGCTGAATCGCTGGCTGGGAGAACAGCTG
AAGCAGCTGGTGCCTGCAAGCGGCCTCACAGTCATGGATCTGGAAGCTGAGGGCACGTGTTTGCGGTTCAGCCCTTTGATGACCGCAGCA
GCTGGAAAAGGATTTTGGTCTGAGATGCTGGGCGTGGGGGACTTCTATTACGAACTAGGTGTCCAAATTATCGAAGTGTGCCTGGCGCTG
AAGCATCGGAATGGAGGTCTGATAACTTTGGAGGAACTACATCAACAGGTGTTGAAGGGAAGGGGCAAGTTCGCCCAGGATGTCAGTCAA
GATGACCTGATCAGAGCCATCAAGAAACTAAAGGCACTTGGCACTGGCTTCGGCATCATCCCTGTGGGCGGCACTTACCTCATTCAGTCT
GTTCCAGCTGAGCTCAATATGGATCACACCGTGGTGCTGCAGCTGGCAGAGAATGGCTACGTGACTGTCAGTGAGATCAAAGCCAGTCTT
AAATGGGAGACCGAGCGAGCGCGGCAAGTGCTGGAACACCTGCTGAAGGAAGGGTTGGCGTGGCTGGACTTACAGGCCCCAGGGGAGGCC
CACTACTGGCTGCCAGCTCTCTTCACTGACCTCTACTCCCAGGAGATTACAGCTGAGGAGGCCAGAGAAGCCCTCCCCTGACTGCATGTG
GAAGGGCACACAGCAGCAGGCAGGGAGGAGGCGGAGGTGGCAAATAAACCTGGGCAATTTTGTTTATACAAAAAATAGAAAAAAAGTTCC

>In-frame_ENST00000325823_ENST00000290330_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(amino acids)=627AA_start in transcript=87_stop in transcript=1970
MGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTL
DKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLG
LPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSS
VLAAAKCDSMTMTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHACQLSQRLQESLKKVN
YIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTA
AAGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQ

--------------------------------------------------------------
>In-frame_ENST00000447912_ENST00000502492_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(transcript)=3138nt_BP=1446nt
ATTTCCAGCCTTTCACTCCATGAATAGTACTTTGTGATTATTATACTTCTACCTTGATGATTGCAACAGGCTGCTGGAAAGAGTTTGGTG
AACAATCCACCGGGCATCCTCCCCCCTTCACCTGCGCACGTTAGGGAGGGCCGGCGTGGCGCCCAGACGGACTCTCACCCTGTCGCCCAG
GCTGGAGTGCAATGGCGCCATCTCGGTTCACTGCAACCTCCGCCTCCCGGGTTCAAACGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGG
GGTTACAGGCACACCACCACGCCCAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGAGG
ACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGATATGAAAATGGGT
GTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATG
GCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCG
GCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACACTGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTTCCTGGAGAAACTGA
TTAAAGATGATATAGAGCGAGGAAGACTGCCCCTGTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTAGGACACACAGACAAGATTGGGA
GATTGAAAGAACTCTGTGAGCAGTATGGCATATGGCTTCATGTGGAGGGTGTGAATCTGGCAACATTGGCTCTGGGTTATGTCTCCTCAT
CAGTGCTGGCTGCAGCCAAATGTGATAGCATGACGATGACTCCTGGCCCGTGGCTGGGTTTGCCAGCTGTTCCTGCGGTGACACTGTATA
AACACGATGACCCTGCCTTGACTTTAGTTGCTGGTCTTACATCAAATAAGCCCACAGACAAACTCCGTGCCCTGCCTCTGTGGTTATCTT
TACAATACTTGGGACTTGATGGGTTTGTGGAGAGGATCAAGCATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGTTTGAAGAAAGTGA
ATTACATCAAAATCTTGGTGGAAGATGAGCTCAGCTCCCCAGTGGTGGTGTTCAGATTTTTCCAGGAATTACCAGGCTCAGATCCGGTGT
TTAAAGCCGTCCCAGTGCCCAACATGACACCTTCAGGAGTCGGCCGGGAGAGGCACTCGTGTGACGCGCTGAATCGCTGGCTGGGAGAAC
AGCTGAAGCAGCTGGTGCCTGCAAGCGGCCTCACAGTCATGGATCTGGAAGCTGAGGGCACGTGTTTGCGGTTCAGCCCTTTGATGACCG
CAGCAGCTGGAAAAGGATTTTGGTCTGAGATGCTGGGCGTGGGGGACTTCTATTACGAACTAGGTGTCCAAATTATCGAAGTGTGCCTGG
CGCTGAAGCATCGGAATGGAGGTCTGATAACTTTGGAGGAACTACATCAACAGGTGTTGAAGGGAAGGGGCAAGTTCGCCCAGGATGTCA
GTCAAGATGACCTGATCAGAGCCATCAAGAAACTAAAGGCACTTGGCACTGGCTTCGGCATCATCCCTGTGGGCGGCACTTACCTCATTC
AGTCTGTTCCAGCTGAGCTCAATATGGATCACACCGTGGTGCTGCAGCTGGCAGAGAAGAATGGCTACGTGACTGTCAGTGAGATCAAAG
CCAGTCTTAAATGGGAGACCGAGCGAGCGCGGCAAGTGCTGGAACACCTGCTGAAGGAAGGGTTGGCGTGGCTGGACTTACAGGCCCCAG
GGGAGGCCCACTACTGGCTGCCAGCTCTCTTCACTGACCTCTACTCCCAGGAGATTACAGCTGAGGAGGCCAGAGAAGCCCTCCCCTGAC
TGCATGTGGAAGGGCACACAGCAGCAGGCAGGGAGGAGGCGGAGGTGGCAAATAAACCTGGGCAATTTTGTTTATACAAAAAATAGAAAA
AAAGTTCCAAGTTTTTCTTTCTTCCCTCATTCTTTTATTTTTGAAAAGTGCCTTCACGTTGCATTTTTATTGGAGGAAAACCTCGCTCGT
TCAGTAAGCATAATCTGATTAACACAGAGAACGGCAAGCACATATAAAATGATTTTTGTAGGTCATCTGCAAGTTCATGGAAGAGCTGGG
CCTAGAATGTGGGTTGTTTCCTGGCCTGTCTAGTCTTTGTAGCTGTGAGACATAGATTACAGCCTATGCTAATTCAAACCTTTTAAATAA
AATGTTCCTTATCTCAAACTAGCTGGTCCTAATGGACCAGTAAATAATATTCACTTTCAGTCTCTTCTGGCTTCCTCTGTAGAGGCTCTA
GGTTATGACAGAGTTAGCTGTGAGTATGAAGGAAATAGAAGTCAATGTCCAATCGTGGCTAAATTGGAGGAAAGAAAACAATGGAATCTG
AGGGGAATCAAACAATAGTTAGGGAATGTTCTATTTTCTTAAATTCCCTACTAGCTTTCTCACCCTCCTGTAGTGATTGCCAGGTCCCTC
TAGCCTCAGTAGTGGGAAAGGGAGTCATTTACTGAACACCTACCCTGTGCCATTTTACATACAGCTCACTTAAATTTCACCAAGTAGGCA
GCCTTCAACATCACAGGTGATTCAATCAAAGTAATTTGCCAGGGGCCGCCAGCTTCAGCCGAGCTAAAGCTGGTGCCTAGGCCTATTAAC
CCGAGCCCATGCCTTCATGTATCACTGCATAGTACAGAATGGCAGCACATACTGTGTGTAGACATTTTTCTACACACGTGGTCAGCCAAG
AGTAAAAGCCTCTGCATCAGAAAGCAAGAATCTCCTATAGCAAGTAGAAGTGGTGATGAGGGAAGAGGCCAGAGTTGTTTAAGGCTCCCA
AAGTCCTTATGGTCTAAAGGCTAAGATCCTAAAAGTGCTAGTTTAGTACTGGAAATCTGAAAACTCAATGGTTTTTCCATACTGAGACCC

>In-frame_ENST00000447912_ENST00000502492_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(amino acids)=570AA_start in transcript=266_stop in transcript=1978
MGLQAHHHAQIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVV
DGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKI
GRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWL
SLQYLGLDGFVERIKHACQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGRERHSCDALNRWLG
EQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAAGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQD
VSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQA

--------------------------------------------------------------
>In-frame_ENST00000447912_ENST00000290330_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(transcript)=2077nt_BP=1446nt
ATTTCCAGCCTTTCACTCCATGAATAGTACTTTGTGATTATTATACTTCTACCTTGATGATTGCAACAGGCTGCTGGAAAGAGTTTGGTG
AACAATCCACCGGGCATCCTCCCCCCTTCACCTGCGCACGTTAGGGAGGGCCGGCGTGGCGCCCAGACGGACTCTCACCCTGTCGCCCAG
GCTGGAGTGCAATGGCGCCATCTCGGTTCACTGCAACCTCCGCCTCCCGGGTTCAAACGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGG
GGTTACAGGCACACCACCACGCCCAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGAGG
ACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGATATGAAAATGGGT
GTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATG
GCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCG
GCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACACTGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTTCCTGGAGAAACTGA
TTAAAGATGATATAGAGCGAGGAAGACTGCCCCTGTTGCTTGTCGCAAATGCAGGAACGGCAGCAGTAGGACACACAGACAAGATTGGGA
GATTGAAAGAACTCTGTGAGCAGTATGGCATATGGCTTCATGTGGAGGGTGTGAATCTGGCAACATTGGCTCTGGGTTATGTCTCCTCAT
CAGTGCTGGCTGCAGCCAAATGTGATAGCATGACGATGACTCCTGGCCCGTGGCTGGGTTTGCCAGCTGTTCCTGCGGTGACACTGTATA
AACACGATGACCCTGCCTTGACTTTAGTTGCTGGTCTTACATCAAATAAGCCCACAGACAAACTCCGTGCCCTGCCTCTGTGGTTATCTT
TACAATACTTGGGACTTGATGGGTTTGTGGAGAGGATCAAGCATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGTTTGAAGAAAGTGA
ATTACATCAAAATCTTGGTGGAAGATGAGCTCAGCTCCCCAGTGGTGGTGTTCAGATTTTTCCAGGAATTACCAGGCTCAGATCCGGTGT
TTAAAGCCGTCCCAGTGCCCAACATGACACCTTCAGGAGTCGGCCGGGAGAGGCACTCGTGTGACGCGCTGAATCGCTGGCTGGGAGAAC
AGCTGAAGCAGCTGGTGCCTGCAAGCGGCCTCACAGTCATGGATCTGGAAGCTGAGGGCACGTGTTTGCGGTTCAGCCCTTTGATGACCG
CAGCAGCTGGAAAAGGATTTTGGTCTGAGATGCTGGGCGTGGGGGACTTCTATTACGAACTAGGTGTCCAAATTATCGAAGTGTGCCTGG
CGCTGAAGCATCGGAATGGAGGTCTGATAACTTTGGAGGAACTACATCAACAGGTGTTGAAGGGAAGGGGCAAGTTCGCCCAGGATGTCA
GTCAAGATGACCTGATCAGAGCCATCAAGAAACTAAAGGCACTTGGCACTGGCTTCGGCATCATCCCTGTGGGCGGCACTTACCTCATTC
AGTCTGTTCCAGCTGAGCTCAATATGGATCACACCGTGGTGCTGCAGCTGGCAGAGAATGGCTACGTGACTGTCAGTGAGATCAAAGCCA
GTCTTAAATGGGAGACCGAGCGAGCGCGGCAAGTGCTGGAACACCTGCTGAAGGAAGGGTTGGCGTGGCTGGACTTACAGGCCCCAGGGG
AGGCCCACTACTGGCTGCCAGCTCTCTTCACTGACCTCTACTCCCAGGAGATTACAGCTGAGGAGGCCAGAGAAGCCCTCCCCTGACTGC
ATGTGGAAGGGCACACAGCAGCAGGCAGGGAGGAGGCGGAGGTGGCAAATAAACCTGGGCAATTTTGTTTATACAAAAAATAGAAAAAAA

>In-frame_ENST00000447912_ENST00000290330_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(amino acids)=569AA_start in transcript=266_stop in transcript=1975
MGLQAHHHAQIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVV
DGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKI
GRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWL
SLQYLGLDGFVERIKHACQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGRERHSCDALNRWLG
EQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAAGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQD
VSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAENGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAP

--------------------------------------------------------------
>In-frame_ENST00000535621_ENST00000502492_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(transcript)=3279nt_BP=1587nt
CCCCGCCCCGCCGCCTCTCAACCATCAGGTTCGGCAGCCCGCGGCGCCGCCTGGCAGCTCCTCCTCTTCTCCGCCCCGCCGGCCGCGGGC
GCGGGGGACGTCAGCGCTGCCAGCGTGGAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTAGAGCCCGGGACCGCCAGGCCACCACCGGCCG
CCTCAGCCATGGACGCGTCCCTGGAGAAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGG
AGGACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGTGGGCAAGATA
TGGTGAGCATCCTCCAGTTAGTTCAGAATCTCATGCATGGAGATGAAGATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTGGAGAAC
AAGGTCATATGGCTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATAC
TTTCAGATACCACCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAA
AGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATC
TTAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACA
CTGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTTCCTGGAGAAACTGATTAAAGATGATATAGAGCGAGGAAGACTGCCCCTGTTGC
TTGTCGCAAATGCAGGAACGGCAGCAGTAGGACACACAGACAAGATTGGGAGATTGAAAGAACTCTGTGAGCAGTATGGCATATGGCTTC
ATGTGGAGGGTGTGAATCTGGCAACATTGGCTCTGGGTTATGTCTCCTCATCAGTGCTGGCTGCAGCCAAATGTGATAGCATGACGATGA
CTCCTGGCCCGTGGCTGGGTTTGCCAGCTGTTCCTGCGGTGACACTGTATAAACACGATGACCCTGCCTTGACTTTAGTTGCTGGTCTTA
CATCAAATAAGCCCACAGACAAACTCCGTGCCCTGCCTCTGTGGTTATCTTTACAATACTTGGGACTTGATGGGTTTGTGGAGAGGATCA
AGCATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGTTTGAAGAAAGTGAATTACATCAAAATCTTGGTGGAAGATGAGCTCAGCTCCC
CAGTGGTGGTGTTCAGATTTTTCCAGGAATTACCAGGCTCAGATCCGGTGTTTAAAGCCGTCCCAGTGCCCAACATGACACCTTCAGGAG
TCGGCCGGGAGAGGCACTCGTGTGACGCGCTGAATCGCTGGCTGGGAGAACAGCTGAAGCAGCTGGTGCCTGCAAGCGGCCTCACAGTCA
TGGATCTGGAAGCTGAGGGCACGTGTTTGCGGTTCAGCCCTTTGATGACCGCAGCAGCTGGAAAAGGATTTTGGTCTGAGATGCTGGGCG
TGGGGGACTTCTATTACGAACTAGGTGTCCAAATTATCGAAGTGTGCCTGGCGCTGAAGCATCGGAATGGAGGTCTGATAACTTTGGAGG
AACTACATCAACAGGTGTTGAAGGGAAGGGGCAAGTTCGCCCAGGATGTCAGTCAAGATGACCTGATCAGAGCCATCAAGAAACTAAAGG
CACTTGGCACTGGCTTCGGCATCATCCCTGTGGGCGGCACTTACCTCATTCAGTCTGTTCCAGCTGAGCTCAATATGGATCACACCGTGG
TGCTGCAGCTGGCAGAGAAGAATGGCTACGTGACTGTCAGTGAGATCAAAGCCAGTCTTAAATGGGAGACCGAGCGAGCGCGGCAAGTGC
TGGAACACCTGCTGAAGGAAGGGTTGGCGTGGCTGGACTTACAGGCCCCAGGGGAGGCCCACTACTGGCTGCCAGCTCTCTTCACTGACC
TCTACTCCCAGGAGATTACAGCTGAGGAGGCCAGAGAAGCCCTCCCCTGACTGCATGTGGAAGGGCACACAGCAGCAGGCAGGGAGGAGG
CGGAGGTGGCAAATAAACCTGGGCAATTTTGTTTATACAAAAAATAGAAAAAAAGTTCCAAGTTTTTCTTTCTTCCCTCATTCTTTTATT
TTTGAAAAGTGCCTTCACGTTGCATTTTTATTGGAGGAAAACCTCGCTCGTTCAGTAAGCATAATCTGATTAACACAGAGAACGGCAAGC
ACATATAAAATGATTTTTGTAGGTCATCTGCAAGTTCATGGAAGAGCTGGGCCTAGAATGTGGGTTGTTTCCTGGCCTGTCTAGTCTTTG
TAGCTGTGAGACATAGATTACAGCCTATGCTAATTCAAACCTTTTAAATAAAATGTTCCTTATCTCAAACTAGCTGGTCCTAATGGACCA
GTAAATAATATTCACTTTCAGTCTCTTCTGGCTTCCTCTGTAGAGGCTCTAGGTTATGACAGAGTTAGCTGTGAGTATGAAGGAAATAGA
AGTCAATGTCCAATCGTGGCTAAATTGGAGGAAAGAAAACAATGGAATCTGAGGGGAATCAAACAATAGTTAGGGAATGTTCTATTTTCT
TAAATTCCCTACTAGCTTTCTCACCCTCCTGTAGTGATTGCCAGGTCCCTCTAGCCTCAGTAGTGGGAAAGGGAGTCATTTACTGAACAC
CTACCCTGTGCCATTTTACATACAGCTCACTTAAATTTCACCAAGTAGGCAGCCTTCAACATCACAGGTGATTCAATCAAAGTAATTTGC
CAGGGGCCGCCAGCTTCAGCCGAGCTAAAGCTGGTGCCTAGGCCTATTAACCCGAGCCCATGCCTTCATGTATCACTGCATAGTACAGAA
TGGCAGCACATACTGTGTGTAGACATTTTTCTACACACGTGGTCAGCCAAGAGTAAAAGCCTCTGCATCAGAAAGCAAGAATCTCCTATA
GCAAGTAGAAGTGGTGATGAGGGAAGAGGCCAGAGTTGTTTAAGGCTCCCAAAGTCCTTATGGTCTAAAGGCTAAGATCCTAAAAGTGCT
AGTTTAGTACTGGAAATCTGAAAACTCAATGGTTTTTCCATACTGAGACCCTTCCTTTAGCAGGATATAGCCTGGGCCCATCTCTTCCTC

>In-frame_ENST00000535621_ENST00000502492_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(amino acids)=689AA_start in transcript=50_stop in transcript=2119
MAAPPLLRPAGRGRGGRQRCQRGRSCGAREEEVEPGTARPPPAASAMDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLIS
GDIPGPLQGSGQDMVSILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENG
CAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKL
IKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPGPWLGLPAVPAVTLY
KHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHACQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPV
FKAVPVPNMTPSGVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAAGKGFWSEMLGVGDFYYELGVQIIEVCL
ALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSEIK

--------------------------------------------------------------
>In-frame_ENST00000535621_ENST00000290330_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(transcript)=2218nt_BP=1587nt
CCCCGCCCCGCCGCCTCTCAACCATCAGGTTCGGCAGCCCGCGGCGCCGCCTGGCAGCTCCTCCTCTTCTCCGCCCCGCCGGCCGCGGGC
GCGGGGGACGTCAGCGCTGCCAGCGTGGAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTAGAGCCCGGGACCGCCAGGCCACCACCGGCCG
CCTCAGCCATGGACGCGTCCCTGGAGAAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGG
AGGACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGTGGGCAAGATA
TGGTGAGCATCCTCCAGTTAGTTCAGAATCTCATGCATGGAGATGAAGATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTGGAGAAC
AAGGTCATATGGCTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATAC
TTTCAGATACCACCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAA
AGATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATC
TTAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACA
CTGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTTCCTGGAGAAACTGATTAAAGATGATATAGAGCGAGGAAGACTGCCCCTGTTGC
TTGTCGCAAATGCAGGAACGGCAGCAGTAGGACACACAGACAAGATTGGGAGATTGAAAGAACTCTGTGAGCAGTATGGCATATGGCTTC
ATGTGGAGGGTGTGAATCTGGCAACATTGGCTCTGGGTTATGTCTCCTCATCAGTGCTGGCTGCAGCCAAATGTGATAGCATGACGATGA
CTCCTGGCCCGTGGCTGGGTTTGCCAGCTGTTCCTGCGGTGACACTGTATAAACACGATGACCCTGCCTTGACTTTAGTTGCTGGTCTTA
CATCAAATAAGCCCACAGACAAACTCCGTGCCCTGCCTCTGTGGTTATCTTTACAATACTTGGGACTTGATGGGTTTGTGGAGAGGATCA
AGCATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGTTTGAAGAAAGTGAATTACATCAAAATCTTGGTGGAAGATGAGCTCAGCTCCC
CAGTGGTGGTGTTCAGATTTTTCCAGGAATTACCAGGCTCAGATCCGGTGTTTAAAGCCGTCCCAGTGCCCAACATGACACCTTCAGGAG
TCGGCCGGGAGAGGCACTCGTGTGACGCGCTGAATCGCTGGCTGGGAGAACAGCTGAAGCAGCTGGTGCCTGCAAGCGGCCTCACAGTCA
TGGATCTGGAAGCTGAGGGCACGTGTTTGCGGTTCAGCCCTTTGATGACCGCAGCAGCTGGAAAAGGATTTTGGTCTGAGATGCTGGGCG
TGGGGGACTTCTATTACGAACTAGGTGTCCAAATTATCGAAGTGTGCCTGGCGCTGAAGCATCGGAATGGAGGTCTGATAACTTTGGAGG
AACTACATCAACAGGTGTTGAAGGGAAGGGGCAAGTTCGCCCAGGATGTCAGTCAAGATGACCTGATCAGAGCCATCAAGAAACTAAAGG
CACTTGGCACTGGCTTCGGCATCATCCCTGTGGGCGGCACTTACCTCATTCAGTCTGTTCCAGCTGAGCTCAATATGGATCACACCGTGG
TGCTGCAGCTGGCAGAGAATGGCTACGTGACTGTCAGTGAGATCAAAGCCAGTCTTAAATGGGAGACCGAGCGAGCGCGGCAAGTGCTGG
AACACCTGCTGAAGGAAGGGTTGGCGTGGCTGGACTTACAGGCCCCAGGGGAGGCCCACTACTGGCTGCCAGCTCTCTTCACTGACCTCT
ACTCCCAGGAGATTACAGCTGAGGAGGCCAGAGAAGCCCTCCCCTGACTGCATGTGGAAGGGCACACAGCAGCAGGCAGGGAGGAGGCGG

>In-frame_ENST00000535621_ENST00000290330_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(amino acids)=688AA_start in transcript=50_stop in transcript=2116
MAAPPLLRPAGRGRGGRQRCQRGRSCGAREEEVEPGTARPPPAASAMDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLIS
GDIPGPLQGSGQDMVSILQLVQNLMHGDEDEEPQSPRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENG
CAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKL
IKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMTPGPWLGLPAVPAVTLY
KHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHACQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPV
FKAVPVPNMTPSGVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAAGKGFWSEMLGVGDFYYELGVQIIEVCL
ALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAENGYVTVSEIKA

--------------------------------------------------------------
>In-frame_ENST00000396410_ENST00000502492_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(transcript)=3188nt_BP=1496nt
CGGGGGACGTCAGCGCTGCCAGCGTGGAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTAGAGCCCGGGACCGCCAGGCCACCACCGGCCGC
CTCAGCCATGGACGCGTCCCTGGAGAAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGA
GGACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGTGGGCAAGATAT
GGTGAGCATCCTCCAGTTAGTTCAGAATCTCATGCATGGAGATGAAGATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTGGAGAACA
AGGTCATATGGCTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATACT
TTCAGATACCACCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAA
GATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATCT
TAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACAC
TGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTTCCTGGAGAAACTGATTAAAGATGATATAGAGCGAGGAAGACTGCCCCTGTTGCT
TGTCGCAAATGCAGGAACGGCAGCAGTAGGACACACAGACAAGATTGGGAGATTGAAAGAACTCTGTGAGCAGTATGGCATATGGCTTCA
TGTGGAGGGTGTGAATCTGGCAACATTGGCTCTGGGTTATGTCTCCTCATCAGTGCTGGCTGCAGCCAAATGTGATAGCATGACGATGAC
TCCTGGCCCGTGGCTGGGTTTGCCAGCTGTTCCTGCGGTGACACTGTATAAACACGATGACCCTGCCTTGACTTTAGTTGCTGGTCTTAC
ATCAAATAAGCCCACAGACAAACTCCGTGCCCTGCCTCTGTGGTTATCTTTACAATACTTGGGACTTGATGGGTTTGTGGAGAGGATCAA
GCATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGTTTGAAGAAAGTGAATTACATCAAAATCTTGGTGGAAGATGAGCTCAGCTCCCC
AGTGGTGGTGTTCAGATTTTTCCAGGAATTACCAGGCTCAGATCCGGTGTTTAAAGCCGTCCCAGTGCCCAACATGACACCTTCAGGAGT
CGGCCGGGAGAGGCACTCGTGTGACGCGCTGAATCGCTGGCTGGGAGAACAGCTGAAGCAGCTGGTGCCTGCAAGCGGCCTCACAGTCAT
GGATCTGGAAGCTGAGGGCACGTGTTTGCGGTTCAGCCCTTTGATGACCGCAGCAGCTGGAAAAGGATTTTGGTCTGAGATGCTGGGCGT
GGGGGACTTCTATTACGAACTAGGTGTCCAAATTATCGAAGTGTGCCTGGCGCTGAAGCATCGGAATGGAGGTCTGATAACTTTGGAGGA
ACTACATCAACAGGTGTTGAAGGGAAGGGGCAAGTTCGCCCAGGATGTCAGTCAAGATGACCTGATCAGAGCCATCAAGAAACTAAAGGC
ACTTGGCACTGGCTTCGGCATCATCCCTGTGGGCGGCACTTACCTCATTCAGTCTGTTCCAGCTGAGCTCAATATGGATCACACCGTGGT
GCTGCAGCTGGCAGAGAAGAATGGCTACGTGACTGTCAGTGAGATCAAAGCCAGTCTTAAATGGGAGACCGAGCGAGCGCGGCAAGTGCT
GGAACACCTGCTGAAGGAAGGGTTGGCGTGGCTGGACTTACAGGCCCCAGGGGAGGCCCACTACTGGCTGCCAGCTCTCTTCACTGACCT
CTACTCCCAGGAGATTACAGCTGAGGAGGCCAGAGAAGCCCTCCCCTGACTGCATGTGGAAGGGCACACAGCAGCAGGCAGGGAGGAGGC
GGAGGTGGCAAATAAACCTGGGCAATTTTGTTTATACAAAAAATAGAAAAAAAGTTCCAAGTTTTTCTTTCTTCCCTCATTCTTTTATTT
TTGAAAAGTGCCTTCACGTTGCATTTTTATTGGAGGAAAACCTCGCTCGTTCAGTAAGCATAATCTGATTAACACAGAGAACGGCAAGCA
CATATAAAATGATTTTTGTAGGTCATCTGCAAGTTCATGGAAGAGCTGGGCCTAGAATGTGGGTTGTTTCCTGGCCTGTCTAGTCTTTGT
AGCTGTGAGACATAGATTACAGCCTATGCTAATTCAAACCTTTTAAATAAAATGTTCCTTATCTCAAACTAGCTGGTCCTAATGGACCAG
TAAATAATATTCACTTTCAGTCTCTTCTGGCTTCCTCTGTAGAGGCTCTAGGTTATGACAGAGTTAGCTGTGAGTATGAAGGAAATAGAA
GTCAATGTCCAATCGTGGCTAAATTGGAGGAAAGAAAACAATGGAATCTGAGGGGAATCAAACAATAGTTAGGGAATGTTCTATTTTCTT
AAATTCCCTACTAGCTTTCTCACCCTCCTGTAGTGATTGCCAGGTCCCTCTAGCCTCAGTAGTGGGAAAGGGAGTCATTTACTGAACACC
TACCCTGTGCCATTTTACATACAGCTCACTTAAATTTCACCAAGTAGGCAGCCTTCAACATCACAGGTGATTCAATCAAAGTAATTTGCC
AGGGGCCGCCAGCTTCAGCCGAGCTAAAGCTGGTGCCTAGGCCTATTAACCCGAGCCCATGCCTTCATGTATCACTGCATAGTACAGAAT
GGCAGCACATACTGTGTGTAGACATTTTTCTACACACGTGGTCAGCCAAGAGTAAAAGCCTCTGCATCAGAAAGCAAGAATCTCCTATAG
CAAGTAGAAGTGGTGATGAGGGAAGAGGCCAGAGTTGTTTAAGGCTCCCAAAGTCCTTATGGTCTAAAGGCTAAGATCCTAAAAGTGCTA
GTTTAGTACTGGAAATCTGAAAACTCAATGGTTTTTCCATACTGAGACCCTTCCTTTAGCAGGATATAGCCTGGGCCCATCTCTTCCTCT

>In-frame_ENST00000396410_ENST00000502492_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(amino acids)=643AA_start in transcript=97_stop in transcript=2028
MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEDEEPQSPRIQNIGEQGH
MALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSA
AARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVE
GVNLATLALGYVSSSVLAAAKCDSMTMTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHA
CQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGRERHSCDALNRWLGEQLKQLVPASGLTVMDL
EAEGTCLRFSPLMTAAAGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALG
TGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFTDLYS

--------------------------------------------------------------
>In-frame_ENST00000396410_ENST00000290330_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(transcript)=2127nt_BP=1496nt
CGGGGGACGTCAGCGCTGCCAGCGTGGAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTAGAGCCCGGGACCGCCAGGCCACCACCGGCCGC
CTCAGCCATGGACGCGTCCCTGGAGAAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGA
GGACAGTCAGAGAAGAACAGAAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGTGGGCAAGATAT
GGTGAGCATCCTCCAGTTAGTTCAGAATCTCATGCATGGAGATGAAGATGAGGAGCCCCAGAGCCCCAGAATCCAAAATATTGGAGAACA
AGGTCATATGGCTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATACT
TTCAGATACCACCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAA
GATATGTAGGCTTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATCT
TAGTGCTGCTGCTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACAC
TGTGTTTGGATCCCAGCATCAGATGGATGTTGCCTTCCTGGAGAAACTGATTAAAGATGATATAGAGCGAGGAAGACTGCCCCTGTTGCT
TGTCGCAAATGCAGGAACGGCAGCAGTAGGACACACAGACAAGATTGGGAGATTGAAAGAACTCTGTGAGCAGTATGGCATATGGCTTCA
TGTGGAGGGTGTGAATCTGGCAACATTGGCTCTGGGTTATGTCTCCTCATCAGTGCTGGCTGCAGCCAAATGTGATAGCATGACGATGAC
TCCTGGCCCGTGGCTGGGTTTGCCAGCTGTTCCTGCGGTGACACTGTATAAACACGATGACCCTGCCTTGACTTTAGTTGCTGGTCTTAC
ATCAAATAAGCCCACAGACAAACTCCGTGCCCTGCCTCTGTGGTTATCTTTACAATACTTGGGACTTGATGGGTTTGTGGAGAGGATCAA
GCATGCCTGTCAACTGAGTCAACGGTTGCAGGAAAGTTTGAAGAAAGTGAATTACATCAAAATCTTGGTGGAAGATGAGCTCAGCTCCCC
AGTGGTGGTGTTCAGATTTTTCCAGGAATTACCAGGCTCAGATCCGGTGTTTAAAGCCGTCCCAGTGCCCAACATGACACCTTCAGGAGT
CGGCCGGGAGAGGCACTCGTGTGACGCGCTGAATCGCTGGCTGGGAGAACAGCTGAAGCAGCTGGTGCCTGCAAGCGGCCTCACAGTCAT
GGATCTGGAAGCTGAGGGCACGTGTTTGCGGTTCAGCCCTTTGATGACCGCAGCAGCTGGAAAAGGATTTTGGTCTGAGATGCTGGGCGT
GGGGGACTTCTATTACGAACTAGGTGTCCAAATTATCGAAGTGTGCCTGGCGCTGAAGCATCGGAATGGAGGTCTGATAACTTTGGAGGA
ACTACATCAACAGGTGTTGAAGGGAAGGGGCAAGTTCGCCCAGGATGTCAGTCAAGATGACCTGATCAGAGCCATCAAGAAACTAAAGGC
ACTTGGCACTGGCTTCGGCATCATCCCTGTGGGCGGCACTTACCTCATTCAGTCTGTTCCAGCTGAGCTCAATATGGATCACACCGTGGT
GCTGCAGCTGGCAGAGAATGGCTACGTGACTGTCAGTGAGATCAAAGCCAGTCTTAAATGGGAGACCGAGCGAGCGCGGCAAGTGCTGGA
ACACCTGCTGAAGGAAGGGTTGGCGTGGCTGGACTTACAGGCCCCAGGGGAGGCCCACTACTGGCTGCCAGCTCTCTTCACTGACCTCTA
CTCCCAGGAGATTACAGCTGAGGAGGCCAGAGAAGCCCTCCCCTGACTGCATGTGGAAGGGCACACAGCAGCAGGCAGGGAGGAGGCGGA

>In-frame_ENST00000396410_ENST00000290330_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(amino acids)=642AA_start in transcript=97_stop in transcript=2025
MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGSGQDMVSILQLVQNLMHGDEDEEPQSPRIQNIGEQGH
MALLGHSLGAYISTLDKEKLRKLTTRILSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSA
AARPGLGQYLCNQLGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVE
GVNLATLALGYVSSSVLAAAKCDSMTMTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHA
CQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGRERHSCDALNRWLGEQLKQLVPASGLTVMDL
EAEGTCLRFSPLMTAAAGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALG
TGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAENGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFTDLYSQ

--------------------------------------------------------------
>In-frame_ENST00000569715_ENST00000502492_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(transcript)=3087nt_BP=1395nt
AGCGTGGAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTAGAGCCCGGGACCGCCAGGCCACCACCGGCCGCCTCAGCCATGGACGCGTCCC
TGGAGAAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGAGGACAGTCAGAGAAGAACAG
AAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGAATCCAAAATATTGGAGAACAAGGTCATATGG
CTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATACTTTCAGATACCA
CCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGC
TTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTG
CTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACACTGTGTTTGGAT
CCCAGCATCAGATGGATGTTGCCTTCCTGGAGAAACTGATTAAAGATGATATAGAGCGAGGAAGACTGCCCCTGTTGCTTGTCGCAAATG
CAGGAACGGCAGCAGTAGGACACACAGACAAGATTGGGAGATTGAAAGAACTCTGTGAGCAGTATGGCATATGGCTTCATGTGGAGGGTG
TGAATCTGGCAACATTGGCTCTGGGTTATGTCTCCTCATCAGTGCTGGCTGCAGCCAAATGTGATAGCATGACGATGACTCCTGGCCCGT
GGCTGGGTTTGCCAGCTGTTCCTGCGGTGACACTGTATAAACACGATGACCCTGCCTTGACTTTAGTTGCTGGTCTTACATCAAATAAGC
CCACAGACAAACTCCGTGCCCTGCCTCTGTGGTTATCTTTACAATACTTGGGACTTGATGGGTTTGTGGAGAGGATCAAGCATGCCTGTC
AACTGAGTCAACGGTTGCAGGAAAGTTTGAAGAAAGTGAATTACATCAAAATCTTGGTGGAAGATGAGCTCAGCTCCCCAGTGGTGGTGT
TCAGATTTTTCCAGGAATTACCAGGCTCAGATCCGGTGTTTAAAGCCGTCCCAGTGCCCAACATGACACCTTCAGGAGTCGGCCGGGAGA
GGCACTCGTGTGACGCGCTGAATCGCTGGCTGGGAGAACAGCTGAAGCAGCTGGTGCCTGCAAGCGGCCTCACAGTCATGGATCTGGAAG
CTGAGGGCACGTGTTTGCGGTTCAGCCCTTTGATGACCGCAGCAGCTGGAAAAGGATTTTGGTCTGAGATGCTGGGCGTGGGGGACTTCT
ATTACGAACTAGGTGTCCAAATTATCGAAGTGTGCCTGGCGCTGAAGCATCGGAATGGAGGTCTGATAACTTTGGAGGAACTACATCAAC
AGGTGTTGAAGGGAAGGGGCAAGTTCGCCCAGGATGTCAGTCAAGATGACCTGATCAGAGCCATCAAGAAACTAAAGGCACTTGGCACTG
GCTTCGGCATCATCCCTGTGGGCGGCACTTACCTCATTCAGTCTGTTCCAGCTGAGCTCAATATGGATCACACCGTGGTGCTGCAGCTGG
CAGAGAAGAATGGCTACGTGACTGTCAGTGAGATCAAAGCCAGTCTTAAATGGGAGACCGAGCGAGCGCGGCAAGTGCTGGAACACCTGC
TGAAGGAAGGGTTGGCGTGGCTGGACTTACAGGCCCCAGGGGAGGCCCACTACTGGCTGCCAGCTCTCTTCACTGACCTCTACTCCCAGG
AGATTACAGCTGAGGAGGCCAGAGAAGCCCTCCCCTGACTGCATGTGGAAGGGCACACAGCAGCAGGCAGGGAGGAGGCGGAGGTGGCAA
ATAAACCTGGGCAATTTTGTTTATACAAAAAATAGAAAAAAAGTTCCAAGTTTTTCTTTCTTCCCTCATTCTTTTATTTTTGAAAAGTGC
CTTCACGTTGCATTTTTATTGGAGGAAAACCTCGCTCGTTCAGTAAGCATAATCTGATTAACACAGAGAACGGCAAGCACATATAAAATG
ATTTTTGTAGGTCATCTGCAAGTTCATGGAAGAGCTGGGCCTAGAATGTGGGTTGTTTCCTGGCCTGTCTAGTCTTTGTAGCTGTGAGAC
ATAGATTACAGCCTATGCTAATTCAAACCTTTTAAATAAAATGTTCCTTATCTCAAACTAGCTGGTCCTAATGGACCAGTAAATAATATT
CACTTTCAGTCTCTTCTGGCTTCCTCTGTAGAGGCTCTAGGTTATGACAGAGTTAGCTGTGAGTATGAAGGAAATAGAAGTCAATGTCCA
ATCGTGGCTAAATTGGAGGAAAGAAAACAATGGAATCTGAGGGGAATCAAACAATAGTTAGGGAATGTTCTATTTTCTTAAATTCCCTAC
TAGCTTTCTCACCCTCCTGTAGTGATTGCCAGGTCCCTCTAGCCTCAGTAGTGGGAAAGGGAGTCATTTACTGAACACCTACCCTGTGCC
ATTTTACATACAGCTCACTTAAATTTCACCAAGTAGGCAGCCTTCAACATCACAGGTGATTCAATCAAAGTAATTTGCCAGGGGCCGCCA
GCTTCAGCCGAGCTAAAGCTGGTGCCTAGGCCTATTAACCCGAGCCCATGCCTTCATGTATCACTGCATAGTACAGAATGGCAGCACATA
CTGTGTGTAGACATTTTTCTACACACGTGGTCAGCCAAGAGTAAAAGCCTCTGCATCAGAAAGCAAGAATCTCCTATAGCAAGTAGAAGT
GGTGATGAGGGAAGAGGCCAGAGTTGTTTAAGGCTCCCAAAGTCCTTATGGTCTAAAGGCTAAGATCCTAAAAGTGCTAGTTTAGTACTG
GAAATCTGAAAACTCAATGGTTTTTCCATACTGAGACCCTTCCTTTAGCAGGATATAGCCTGGGCCCATCTCTTCCTCTGCCTATCCTTG

>In-frame_ENST00000569715_ENST00000502492_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(amino acids)=616AA_start in transcript=77_stop in transcript=1927
MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRI
LSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCN
TVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTM
TPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHACQLSQRLQESLKKVNYIKILVEDELSS
PVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAAGKGFWSEMLG
VGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTV

--------------------------------------------------------------
>In-frame_ENST00000569715_ENST00000290330_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(transcript)=2026nt_BP=1395nt
AGCGTGGAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTAGAGCCCGGGACCGCCAGGCCACCACCGGCCGCCTCAGCCATGGACGCGTCCC
TGGAGAAGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGAGGACAGTCAGAGAAGAACAG
AAGAGGAAAATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGAATCCAAAATATTGGAGAACAAGGTCATATGG
CTTTGTTGGGACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATACTTTCAGATACCA
CCTTATGGCTATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGC
TTGCCATTCATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTG
CTAGACCTGGCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACACTGTGTTTGGAT
CCCAGCATCAGATGGATGTTGCCTTCCTGGAGAAACTGATTAAAGATGATATAGAGCGAGGAAGACTGCCCCTGTTGCTTGTCGCAAATG
CAGGAACGGCAGCAGTAGGACACACAGACAAGATTGGGAGATTGAAAGAACTCTGTGAGCAGTATGGCATATGGCTTCATGTGGAGGGTG
TGAATCTGGCAACATTGGCTCTGGGTTATGTCTCCTCATCAGTGCTGGCTGCAGCCAAATGTGATAGCATGACGATGACTCCTGGCCCGT
GGCTGGGTTTGCCAGCTGTTCCTGCGGTGACACTGTATAAACACGATGACCCTGCCTTGACTTTAGTTGCTGGTCTTACATCAAATAAGC
CCACAGACAAACTCCGTGCCCTGCCTCTGTGGTTATCTTTACAATACTTGGGACTTGATGGGTTTGTGGAGAGGATCAAGCATGCCTGTC
AACTGAGTCAACGGTTGCAGGAAAGTTTGAAGAAAGTGAATTACATCAAAATCTTGGTGGAAGATGAGCTCAGCTCCCCAGTGGTGGTGT
TCAGATTTTTCCAGGAATTACCAGGCTCAGATCCGGTGTTTAAAGCCGTCCCAGTGCCCAACATGACACCTTCAGGAGTCGGCCGGGAGA
GGCACTCGTGTGACGCGCTGAATCGCTGGCTGGGAGAACAGCTGAAGCAGCTGGTGCCTGCAAGCGGCCTCACAGTCATGGATCTGGAAG
CTGAGGGCACGTGTTTGCGGTTCAGCCCTTTGATGACCGCAGCAGCTGGAAAAGGATTTTGGTCTGAGATGCTGGGCGTGGGGGACTTCT
ATTACGAACTAGGTGTCCAAATTATCGAAGTGTGCCTGGCGCTGAAGCATCGGAATGGAGGTCTGATAACTTTGGAGGAACTACATCAAC
AGGTGTTGAAGGGAAGGGGCAAGTTCGCCCAGGATGTCAGTCAAGATGACCTGATCAGAGCCATCAAGAAACTAAAGGCACTTGGCACTG
GCTTCGGCATCATCCCTGTGGGCGGCACTTACCTCATTCAGTCTGTTCCAGCTGAGCTCAATATGGATCACACCGTGGTGCTGCAGCTGG
CAGAGAATGGCTACGTGACTGTCAGTGAGATCAAAGCCAGTCTTAAATGGGAGACCGAGCGAGCGCGGCAAGTGCTGGAACACCTGCTGA
AGGAAGGGTTGGCGTGGCTGGACTTACAGGCCCCAGGGGAGGCCCACTACTGGCTGCCAGCTCTCTTCACTGACCTCTACTCCCAGGAGA
TTACAGCTGAGGAGGCCAGAGAAGCCCTCCCCTGACTGCATGTGGAAGGGCACACAGCAGCAGGCAGGGAGGAGGCGGAGGTGGCAAATA

>In-frame_ENST00000569715_ENST00000290330_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(amino acids)=615AA_start in transcript=77_stop in transcript=1924
MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRRTEEENGKKLISGDIPGPLQGRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRI
LSDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCN
TVFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTM
TPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHACQLSQRLQESLKKVNYIKILVEDELSS
PVVVFRFFQELPGSDPVFKAVPVPNMTPSGVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAAGKGFWSEMLG
VGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTV

--------------------------------------------------------------
>In-frame_ENST00000450288_ENST00000502492_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(transcript)=3078nt_BP=1386nt
GAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTAGAGCCCGGGACCGCCAGGCCACCACCGGCCGCCTCAGCCATGGACGCGTCCCTGGAGA
AGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGAGGACAGTCAGAGAACAGAAGAGGAAA
ATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGAATCCAAAATATTGGAGAACAAGGTCATATGGCTTTGTTGG
GACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATACTTTCAGATACCACCTTATGGC
TATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTC
ATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTGCTAGACCTG
GCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACACTGTGTTTGGATCCCAGCATC
AGATGGATGTTGCCTTCCTGGAGAAACTGATTAAAGATGATATAGAGCGAGGAAGACTGCCCCTGTTGCTTGTCGCAAATGCAGGAACGG
CAGCAGTAGGACACACAGACAAGATTGGGAGATTGAAAGAACTCTGTGAGCAGTATGGCATATGGCTTCATGTGGAGGGTGTGAATCTGG
CAACATTGGCTCTGGGTTATGTCTCCTCATCAGTGCTGGCTGCAGCCAAATGTGATAGCATGACGATGACTCCTGGCCCGTGGCTGGGTT
TGCCAGCTGTTCCTGCGGTGACACTGTATAAACACGATGACCCTGCCTTGACTTTAGTTGCTGGTCTTACATCAAATAAGCCCACAGACA
AACTCCGTGCCCTGCCTCTGTGGTTATCTTTACAATACTTGGGACTTGATGGGTTTGTGGAGAGGATCAAGCATGCCTGTCAACTGAGTC
AACGGTTGCAGGAAAGTTTGAAGAAAGTGAATTACATCAAAATCTTGGTGGAAGATGAGCTCAGCTCCCCAGTGGTGGTGTTCAGATTTT
TCCAGGAATTACCAGGCTCAGATCCGGTGTTTAAAGCCGTCCCAGTGCCCAACATGACACCTTCAGGAGTCGGCCGGGAGAGGCACTCGT
GTGACGCGCTGAATCGCTGGCTGGGAGAACAGCTGAAGCAGCTGGTGCCTGCAAGCGGCCTCACAGTCATGGATCTGGAAGCTGAGGGCA
CGTGTTTGCGGTTCAGCCCTTTGATGACCGCAGCAGCTGGAAAAGGATTTTGGTCTGAGATGCTGGGCGTGGGGGACTTCTATTACGAAC
TAGGTGTCCAAATTATCGAAGTGTGCCTGGCGCTGAAGCATCGGAATGGAGGTCTGATAACTTTGGAGGAACTACATCAACAGGTGTTGA
AGGGAAGGGGCAAGTTCGCCCAGGATGTCAGTCAAGATGACCTGATCAGAGCCATCAAGAAACTAAAGGCACTTGGCACTGGCTTCGGCA
TCATCCCTGTGGGCGGCACTTACCTCATTCAGTCTGTTCCAGCTGAGCTCAATATGGATCACACCGTGGTGCTGCAGCTGGCAGAGAAGA
ATGGCTACGTGACTGTCAGTGAGATCAAAGCCAGTCTTAAATGGGAGACCGAGCGAGCGCGGCAAGTGCTGGAACACCTGCTGAAGGAAG
GGTTGGCGTGGCTGGACTTACAGGCCCCAGGGGAGGCCCACTACTGGCTGCCAGCTCTCTTCACTGACCTCTACTCCCAGGAGATTACAG
CTGAGGAGGCCAGAGAAGCCCTCCCCTGACTGCATGTGGAAGGGCACACAGCAGCAGGCAGGGAGGAGGCGGAGGTGGCAAATAAACCTG
GGCAATTTTGTTTATACAAAAAATAGAAAAAAAGTTCCAAGTTTTTCTTTCTTCCCTCATTCTTTTATTTTTGAAAAGTGCCTTCACGTT
GCATTTTTATTGGAGGAAAACCTCGCTCGTTCAGTAAGCATAATCTGATTAACACAGAGAACGGCAAGCACATATAAAATGATTTTTGTA
GGTCATCTGCAAGTTCATGGAAGAGCTGGGCCTAGAATGTGGGTTGTTTCCTGGCCTGTCTAGTCTTTGTAGCTGTGAGACATAGATTAC
AGCCTATGCTAATTCAAACCTTTTAAATAAAATGTTCCTTATCTCAAACTAGCTGGTCCTAATGGACCAGTAAATAATATTCACTTTCAG
TCTCTTCTGGCTTCCTCTGTAGAGGCTCTAGGTTATGACAGAGTTAGCTGTGAGTATGAAGGAAATAGAAGTCAATGTCCAATCGTGGCT
AAATTGGAGGAAAGAAAACAATGGAATCTGAGGGGAATCAAACAATAGTTAGGGAATGTTCTATTTTCTTAAATTCCCTACTAGCTTTCT
CACCCTCCTGTAGTGATTGCCAGGTCCCTCTAGCCTCAGTAGTGGGAAAGGGAGTCATTTACTGAACACCTACCCTGTGCCATTTTACAT
ACAGCTCACTTAAATTTCACCAAGTAGGCAGCCTTCAACATCACAGGTGATTCAATCAAAGTAATTTGCCAGGGGCCGCCAGCTTCAGCC
GAGCTAAAGCTGGTGCCTAGGCCTATTAACCCGAGCCCATGCCTTCATGTATCACTGCATAGTACAGAATGGCAGCACATACTGTGTGTA
GACATTTTTCTACACACGTGGTCAGCCAAGAGTAAAAGCCTCTGCATCAGAAAGCAAGAATCTCCTATAGCAAGTAGAAGTGGTGATGAG
GGAAGAGGCCAGAGTTGTTTAAGGCTCCCAAAGTCCTTATGGTCTAAAGGCTAAGATCCTAAAAGTGCTAGTTTAGTACTGGAAATCTGA
AAACTCAATGGTTTTTCCATACTGAGACCCTTCCTTTAGCAGGATATAGCCTGGGCCCATCTCTTCCTCTGCCTATCCTTGTAGGACATG

>In-frame_ENST00000450288_ENST00000502492_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(amino acids)=615AA_start in transcript=71_stop in transcript=1918
MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRTEEENGKKLISGDIPGPLQGRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRIL
SDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNT
VFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMT
PGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHACQLSQRLQESLKKVNYIKILVEDELSSP
VVVFRFFQELPGSDPVFKAVPVPNMTPSGVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAAGKGFWSEMLGV
GDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVV

--------------------------------------------------------------
>In-frame_ENST00000450288_ENST00000290330_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(transcript)=2017nt_BP=1386nt
GAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTAGAGCCCGGGACCGCCAGGCCACCACCGGCCGCCTCAGCCATGGACGCGTCCCTGGAGA
AGATAGCAGACCCCACGTTAGCTGAAATGGGAAAAAACTTGAAGGAGGCAGTGAAGATGCTGGAGGACAGTCAGAGAACAGAAGAGGAAA
ATGGAAAGAAGCTCATATCCGGAGATATTCCAGGCCCACTCCAGGGCAGAATCCAAAATATTGGAGAACAAGGTCATATGGCTTTGTTGG
GACATAGTCTGGGAGCTTATATTTCAACTCTGGACAAAGAGAAGCTGAGAAAACTTACAACTAGGATACTTTCAGATACCACCTTATGGC
TATGCAGAATTTTCAGATATGAAAATGGGTGTGCTTATTTCCACGAAGAGGAAAGAGAAGGACTTGCAAAGATATGTAGGCTTGCCATTC
ATTCTCGATATGAAGACTTCGTAGTGGATGGCTTCAATGTGTTATATAACAAGAAGCCTGTCATATATCTTAGTGCTGCTGCTAGACCTG
GCCTGGGCCAATACCTTTGTAATCAGCTCGGCTTGCCCTTCCCCTGCTTGTGCCGTGTACCCTGTAACACTGTGTTTGGATCCCAGCATC
AGATGGATGTTGCCTTCCTGGAGAAACTGATTAAAGATGATATAGAGCGAGGAAGACTGCCCCTGTTGCTTGTCGCAAATGCAGGAACGG
CAGCAGTAGGACACACAGACAAGATTGGGAGATTGAAAGAACTCTGTGAGCAGTATGGCATATGGCTTCATGTGGAGGGTGTGAATCTGG
CAACATTGGCTCTGGGTTATGTCTCCTCATCAGTGCTGGCTGCAGCCAAATGTGATAGCATGACGATGACTCCTGGCCCGTGGCTGGGTT
TGCCAGCTGTTCCTGCGGTGACACTGTATAAACACGATGACCCTGCCTTGACTTTAGTTGCTGGTCTTACATCAAATAAGCCCACAGACA
AACTCCGTGCCCTGCCTCTGTGGTTATCTTTACAATACTTGGGACTTGATGGGTTTGTGGAGAGGATCAAGCATGCCTGTCAACTGAGTC
AACGGTTGCAGGAAAGTTTGAAGAAAGTGAATTACATCAAAATCTTGGTGGAAGATGAGCTCAGCTCCCCAGTGGTGGTGTTCAGATTTT
TCCAGGAATTACCAGGCTCAGATCCGGTGTTTAAAGCCGTCCCAGTGCCCAACATGACACCTTCAGGAGTCGGCCGGGAGAGGCACTCGT
GTGACGCGCTGAATCGCTGGCTGGGAGAACAGCTGAAGCAGCTGGTGCCTGCAAGCGGCCTCACAGTCATGGATCTGGAAGCTGAGGGCA
CGTGTTTGCGGTTCAGCCCTTTGATGACCGCAGCAGCTGGAAAAGGATTTTGGTCTGAGATGCTGGGCGTGGGGGACTTCTATTACGAAC
TAGGTGTCCAAATTATCGAAGTGTGCCTGGCGCTGAAGCATCGGAATGGAGGTCTGATAACTTTGGAGGAACTACATCAACAGGTGTTGA
AGGGAAGGGGCAAGTTCGCCCAGGATGTCAGTCAAGATGACCTGATCAGAGCCATCAAGAAACTAAAGGCACTTGGCACTGGCTTCGGCA
TCATCCCTGTGGGCGGCACTTACCTCATTCAGTCTGTTCCAGCTGAGCTCAATATGGATCACACCGTGGTGCTGCAGCTGGCAGAGAATG
GCTACGTGACTGTCAGTGAGATCAAAGCCAGTCTTAAATGGGAGACCGAGCGAGCGCGGCAAGTGCTGGAACACCTGCTGAAGGAAGGGT
TGGCGTGGCTGGACTTACAGGCCCCAGGGGAGGCCCACTACTGGCTGCCAGCTCTCTTCACTGACCTCTACTCCCAGGAGATTACAGCTG
AGGAGGCCAGAGAAGCCCTCCCCTGACTGCATGTGGAAGGGCACACAGCAGCAGGCAGGGAGGAGGCGGAGGTGGCAAATAAACCTGGGC

>In-frame_ENST00000450288_ENST00000290330_TCGA-J4-A67R_PDXDC1_chr16_15123913_+_SNF8_chr17_47014486_length(amino acids)=614AA_start in transcript=71_stop in transcript=1915
MDASLEKIADPTLAEMGKNLKEAVKMLEDSQRTEEENGKKLISGDIPGPLQGRIQNIGEQGHMALLGHSLGAYISTLDKEKLRKLTTRIL
SDTTLWLCRIFRYENGCAYFHEEEREGLAKICRLAIHSRYEDFVVDGFNVLYNKKPVIYLSAAARPGLGQYLCNQLGLPFPCLCRVPCNT
VFGSQHQMDVAFLEKLIKDDIERGRLPLLLVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSMTMT
PGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGFVERIKHACQLSQRLQESLKKVNYIKILVEDELSSP
VVVFRFFQELPGSDPVFKAVPVPNMTPSGVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAAGKGFWSEMLGV
GDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVV

--------------------------------------------------------------

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Fusion Gene PPI Analysis for PDXDC1-SNF8


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for PDXDC1-SNF8


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for PDXDC1-SNF8


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgenePDXDC1C0007134Renal Cell Carcinoma1CTD_human
HgenePDXDC1C0279702Conventional (Clear Cell) Renal Cell Carcinoma1CTD_human
HgenePDXDC1C1266042Chromophobe Renal Cell Carcinoma1CTD_human
HgenePDXDC1C1266043Sarcomatoid Renal Cell Carcinoma1CTD_human
HgenePDXDC1C1266044Collecting Duct Carcinoma of the Kidney1CTD_human
HgenePDXDC1C1306837Papillary Renal Cell Carcinoma1CTD_human