|
Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:PICALM-ME3 (FusionGDB2 ID:64745) |
Fusion Gene Summary for PICALM-ME3 |
Fusion gene summary |
Fusion gene information | Fusion gene name: PICALM-ME3 | Fusion gene ID: 64745 | Hgene | Tgene | Gene symbol | PICALM | ME3 | Gene ID | 8301 | 56110 |
Gene name | phosphatidylinositol binding clathrin assembly protein | protocadherin gamma subfamily A, 5 | |
Synonyms | CALM|CLTH|LAP | CDH-GAMMA-A5|ME3|PCDH-GAMMA-A5 | |
Cytomap | 11q14.2 | 5q31.3 | |
Type of gene | protein-coding | protein-coding | |
Description | phosphatidylinositol-binding clathrin assembly proteinclathrin assembly lymphoid myeloid leukemia protein | protocadherin gamma-A5cadherin ME3 | |
Modification date | 20200322 | 20200313 | |
UniProtAcc | . | Q16798 | |
Ensembl transtripts involved in fusion gene | ENST00000532317, ENST00000526033, ENST00000393346, ENST00000528398, ENST00000356360, ENST00000528411, | ENST00000393324, ENST00000359636, ENST00000543262, ENST00000323418, ENST00000525957, | |
Fusion gene scores | * DoF score | 24 X 29 X 9=6264 | 9 X 9 X 4=324 |
# samples | 39 | 11 | |
** MAII score | log2(39/6264*10)=-4.00553818354143 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(11/324*10)=-1.55849028935997 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PICALM [Title/Abstract] AND ME3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | PICALM(85707869)-ME3(86198482), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. | PICALM-ME3 seems lost the major protein functional domain in Hgene partner, which is a CGC due to the frame-shifted ORF. PICALM-ME3 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. PICALM-ME3 seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF. PICALM-ME3 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | PICALM | GO:0006897 | endocytosis | 22118466 |
Hgene | PICALM | GO:0006898 | receptor-mediated endocytosis | 10436022 |
Hgene | PICALM | GO:0032880 | regulation of protein localization | 10436022 |
Hgene | PICALM | GO:0045893 | positive regulation of transcription, DNA-templated | 11425879 |
Hgene | PICALM | GO:0048261 | negative regulation of receptor-mediated endocytosis | 10436022 |
Hgene | PICALM | GO:1905224 | clathrin-coated pit assembly | 16262731 |
Fusion gene breakpoints across PICALM (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across ME3 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | OV | TCGA-20-0987-01A | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
ChimerDB4 | OV | TCGA-VG-A8LO-01A | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
ChimerDB4 | OV | TCGA-VG-A8LO | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
ChimerDB4 | OV | TCGA-VG-A8LO | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
ChimerDB4 | OV | TCGA-VG-A8LO | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
ChimerDB4 | OV | TCGA-VG-A8LO | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
ChimerDB4 | OV | TCGA-VG-A8LO-01A | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
ChimerDB4 | OV | TCGA-VG-A8LO-01A | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
ChimerDB4 | OV | TCGA-20-0987-01A | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
ChimerDB4 | OV | TCGA-VG-A8LO-01A | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Top |
Fusion Gene ORF analysis for PICALM-ME3 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000532317 | ENST00000393324 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
In-frame | ENST00000532317 | ENST00000359636 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
In-frame | ENST00000532317 | ENST00000543262 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
In-frame | ENST00000532317 | ENST00000323418 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
5CDS-intron | ENST00000532317 | ENST00000525957 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
In-frame | ENST00000526033 | ENST00000393324 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
In-frame | ENST00000526033 | ENST00000359636 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
In-frame | ENST00000526033 | ENST00000543262 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
In-frame | ENST00000526033 | ENST00000323418 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
5CDS-intron | ENST00000526033 | ENST00000525957 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
In-frame | ENST00000393346 | ENST00000393324 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
In-frame | ENST00000393346 | ENST00000359636 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
In-frame | ENST00000393346 | ENST00000543262 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
In-frame | ENST00000393346 | ENST00000323418 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
5CDS-intron | ENST00000393346 | ENST00000525957 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
intron-3CDS | ENST00000528398 | ENST00000393324 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
intron-3CDS | ENST00000528398 | ENST00000359636 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
intron-3CDS | ENST00000528398 | ENST00000543262 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
intron-3CDS | ENST00000528398 | ENST00000323418 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
intron-intron | ENST00000528398 | ENST00000525957 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
In-frame | ENST00000356360 | ENST00000393324 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
In-frame | ENST00000356360 | ENST00000359636 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
In-frame | ENST00000356360 | ENST00000543262 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
In-frame | ENST00000356360 | ENST00000323418 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
5CDS-intron | ENST00000356360 | ENST00000525957 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
5UTR-3CDS | ENST00000528411 | ENST00000393324 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
5UTR-3CDS | ENST00000528411 | ENST00000359636 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
5UTR-3CDS | ENST00000528411 | ENST00000543262 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
5UTR-3CDS | ENST00000528411 | ENST00000323418 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
5UTR-intron | ENST00000528411 | ENST00000525957 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - |
Frame-shift | ENST00000532317 | ENST00000393324 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000532317 | ENST00000359636 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000532317 | ENST00000543262 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000532317 | ENST00000323418 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
5CDS-5UTR | ENST00000532317 | ENST00000525957 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000526033 | ENST00000393324 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000526033 | ENST00000359636 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000526033 | ENST00000543262 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000526033 | ENST00000323418 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
5CDS-5UTR | ENST00000526033 | ENST00000525957 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000393346 | ENST00000393324 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000393346 | ENST00000359636 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000393346 | ENST00000543262 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000393346 | ENST00000323418 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
5CDS-5UTR | ENST00000393346 | ENST00000525957 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000528398 | ENST00000393324 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000528398 | ENST00000359636 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000528398 | ENST00000543262 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000528398 | ENST00000323418 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
5CDS-5UTR | ENST00000528398 | ENST00000525957 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000356360 | ENST00000393324 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000356360 | ENST00000359636 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000356360 | ENST00000543262 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000356360 | ENST00000323418 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
5CDS-5UTR | ENST00000356360 | ENST00000525957 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000528411 | ENST00000393324 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000528411 | ENST00000359636 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000528411 | ENST00000543262 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000528411 | ENST00000323418 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
intron-5UTR | ENST00000528411 | ENST00000525957 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000532317 | ENST00000393324 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000532317 | ENST00000359636 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000532317 | ENST00000543262 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000532317 | ENST00000323418 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
5CDS-5UTR | ENST00000532317 | ENST00000525957 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000526033 | ENST00000393324 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000526033 | ENST00000359636 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000526033 | ENST00000543262 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000526033 | ENST00000323418 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
5CDS-5UTR | ENST00000526033 | ENST00000525957 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000393346 | ENST00000393324 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000393346 | ENST00000359636 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000393346 | ENST00000543262 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000393346 | ENST00000323418 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
5CDS-5UTR | ENST00000393346 | ENST00000525957 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000528398 | ENST00000393324 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000528398 | ENST00000359636 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000528398 | ENST00000543262 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000528398 | ENST00000323418 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
5CDS-5UTR | ENST00000528398 | ENST00000525957 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000356360 | ENST00000393324 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000356360 | ENST00000359636 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000356360 | ENST00000543262 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000356360 | ENST00000323418 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
5CDS-5UTR | ENST00000356360 | ENST00000525957 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000528411 | ENST00000393324 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000528411 | ENST00000359636 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000528411 | ENST00000543262 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000528411 | ENST00000323418 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
intron-5UTR | ENST00000528411 | ENST00000525957 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000532317 | ENST00000393324 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000532317 | ENST00000359636 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000532317 | ENST00000543262 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000532317 | ENST00000323418 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
5CDS-5UTR | ENST00000532317 | ENST00000525957 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000526033 | ENST00000393324 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000526033 | ENST00000359636 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000526033 | ENST00000543262 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000526033 | ENST00000323418 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
5CDS-5UTR | ENST00000526033 | ENST00000525957 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000393346 | ENST00000393324 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000393346 | ENST00000359636 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000393346 | ENST00000543262 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000393346 | ENST00000323418 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
5CDS-5UTR | ENST00000393346 | ENST00000525957 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
In-frame | ENST00000528398 | ENST00000393324 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
In-frame | ENST00000528398 | ENST00000359636 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
In-frame | ENST00000528398 | ENST00000543262 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
In-frame | ENST00000528398 | ENST00000323418 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
5CDS-5UTR | ENST00000528398 | ENST00000525957 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000356360 | ENST00000393324 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000356360 | ENST00000359636 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000356360 | ENST00000543262 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000356360 | ENST00000323418 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
5CDS-5UTR | ENST00000356360 | ENST00000525957 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
intron-3CDS | ENST00000528411 | ENST00000393324 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
intron-3CDS | ENST00000528411 | ENST00000359636 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
intron-3CDS | ENST00000528411 | ENST00000543262 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
intron-3CDS | ENST00000528411 | ENST00000323418 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
intron-5UTR | ENST00000528411 | ENST00000525957 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - |
intron-3CDS | ENST00000532317 | ENST00000393324 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000532317 | ENST00000359636 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000532317 | ENST00000543262 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000532317 | ENST00000323418 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
intron-5UTR | ENST00000532317 | ENST00000525957 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000526033 | ENST00000393324 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000526033 | ENST00000359636 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000526033 | ENST00000543262 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000526033 | ENST00000323418 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
5CDS-5UTR | ENST00000526033 | ENST00000525957 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000393346 | ENST00000393324 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000393346 | ENST00000359636 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000393346 | ENST00000543262 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000393346 | ENST00000323418 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
5CDS-5UTR | ENST00000393346 | ENST00000525957 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000528398 | ENST00000393324 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000528398 | ENST00000359636 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000528398 | ENST00000543262 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000528398 | ENST00000323418 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
intron-5UTR | ENST00000528398 | ENST00000525957 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000356360 | ENST00000393324 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000356360 | ENST00000359636 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000356360 | ENST00000543262 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000356360 | ENST00000323418 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
5CDS-5UTR | ENST00000356360 | ENST00000525957 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000528411 | ENST00000393324 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000528411 | ENST00000359636 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000528411 | ENST00000543262 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
intron-3CDS | ENST00000528411 | ENST00000323418 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
intron-5UTR | ENST00000528411 | ENST00000525957 | PICALM | chr11 | 85701292 | - | ME3 | chr11 | 86198482 | - |
Frame-shift | ENST00000532317 | ENST00000393324 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000532317 | ENST00000359636 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000532317 | ENST00000543262 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000532317 | ENST00000323418 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
5CDS-5UTR | ENST00000532317 | ENST00000525957 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000526033 | ENST00000393324 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000526033 | ENST00000359636 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000526033 | ENST00000543262 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000526033 | ENST00000323418 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
5CDS-5UTR | ENST00000526033 | ENST00000525957 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000393346 | ENST00000393324 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000393346 | ENST00000359636 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000393346 | ENST00000543262 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000393346 | ENST00000323418 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
5CDS-5UTR | ENST00000393346 | ENST00000525957 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
In-frame | ENST00000528398 | ENST00000393324 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
In-frame | ENST00000528398 | ENST00000359636 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
In-frame | ENST00000528398 | ENST00000543262 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
In-frame | ENST00000528398 | ENST00000323418 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
5CDS-5UTR | ENST00000528398 | ENST00000525957 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000356360 | ENST00000393324 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000356360 | ENST00000359636 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000356360 | ENST00000543262 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
Frame-shift | ENST00000356360 | ENST00000323418 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
5CDS-5UTR | ENST00000356360 | ENST00000525957 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
intron-3CDS | ENST00000528411 | ENST00000393324 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
intron-3CDS | ENST00000528411 | ENST00000359636 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
intron-3CDS | ENST00000528411 | ENST00000543262 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
intron-3CDS | ENST00000528411 | ENST00000323418 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
intron-5UTR | ENST00000528411 | ENST00000525957 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000532317 | PICALM | chr11 | 85779693 | - | ENST00000393324 | ME3 | chr11 | 86270865 | - | 2212 | 409 | 310 | 2040 | 576 |
ENST00000532317 | PICALM | chr11 | 85779693 | - | ENST00000359636 | ME3 | chr11 | 86270865 | - | 2212 | 409 | 310 | 2040 | 576 |
ENST00000532317 | PICALM | chr11 | 85779693 | - | ENST00000543262 | ME3 | chr11 | 86270865 | - | 2210 | 409 | 310 | 2040 | 576 |
ENST00000532317 | PICALM | chr11 | 85779693 | - | ENST00000323418 | ME3 | chr11 | 86270865 | - | 1189 | 409 | 310 | 1188 | 293 |
ENST00000526033 | PICALM | chr11 | 85779693 | - | ENST00000393324 | ME3 | chr11 | 86270865 | - | 2250 | 447 | 348 | 2078 | 576 |
ENST00000526033 | PICALM | chr11 | 85779693 | - | ENST00000359636 | ME3 | chr11 | 86270865 | - | 2250 | 447 | 348 | 2078 | 576 |
ENST00000526033 | PICALM | chr11 | 85779693 | - | ENST00000543262 | ME3 | chr11 | 86270865 | - | 2248 | 447 | 348 | 2078 | 576 |
ENST00000526033 | PICALM | chr11 | 85779693 | - | ENST00000323418 | ME3 | chr11 | 86270865 | - | 1227 | 447 | 348 | 1226 | 292 |
ENST00000393346 | PICALM | chr11 | 85779693 | - | ENST00000393324 | ME3 | chr11 | 86270865 | - | 2082 | 279 | 180 | 1910 | 576 |
ENST00000393346 | PICALM | chr11 | 85779693 | - | ENST00000359636 | ME3 | chr11 | 86270865 | - | 2082 | 279 | 180 | 1910 | 576 |
ENST00000393346 | PICALM | chr11 | 85779693 | - | ENST00000543262 | ME3 | chr11 | 86270865 | - | 2080 | 279 | 180 | 1910 | 576 |
ENST00000393346 | PICALM | chr11 | 85779693 | - | ENST00000323418 | ME3 | chr11 | 86270865 | - | 1059 | 279 | 180 | 1058 | 292 |
ENST00000356360 | PICALM | chr11 | 85779693 | - | ENST00000393324 | ME3 | chr11 | 86270865 | - | 1933 | 130 | 31 | 1761 | 576 |
ENST00000356360 | PICALM | chr11 | 85779693 | - | ENST00000359636 | ME3 | chr11 | 86270865 | - | 1933 | 130 | 31 | 1761 | 576 |
ENST00000356360 | PICALM | chr11 | 85779693 | - | ENST00000543262 | ME3 | chr11 | 86270865 | - | 1931 | 130 | 31 | 1761 | 576 |
ENST00000356360 | PICALM | chr11 | 85779693 | - | ENST00000323418 | ME3 | chr11 | 86270865 | - | 910 | 130 | 31 | 909 | 293 |
ENST00000528398 | PICALM | chr11 | 85707868 | - | ENST00000393324 | ME3 | chr11 | 86176242 | - | 2468 | 1291 | 186 | 1301 | 371 |
ENST00000528398 | PICALM | chr11 | 85707868 | - | ENST00000359636 | ME3 | chr11 | 86176242 | - | 2468 | 1291 | 186 | 1301 | 371 |
ENST00000528398 | PICALM | chr11 | 85707868 | - | ENST00000543262 | ME3 | chr11 | 86176242 | - | 2466 | 1291 | 186 | 1301 | 371 |
ENST00000528398 | PICALM | chr11 | 85707868 | - | ENST00000323418 | ME3 | chr11 | 86176242 | - | 1448 | 1291 | 186 | 1301 | 371 |
ENST00000528398 | PICALM | chr11 | 85707869 | - | ENST00000393324 | ME3 | chr11 | 86176242 | - | 2468 | 1291 | 186 | 1301 | 371 |
ENST00000528398 | PICALM | chr11 | 85707869 | - | ENST00000359636 | ME3 | chr11 | 86176242 | - | 2468 | 1291 | 186 | 1301 | 371 |
ENST00000528398 | PICALM | chr11 | 85707869 | - | ENST00000543262 | ME3 | chr11 | 86176242 | - | 2466 | 1291 | 186 | 1301 | 371 |
ENST00000528398 | PICALM | chr11 | 85707869 | - | ENST00000323418 | ME3 | chr11 | 86176242 | - | 1448 | 1291 | 186 | 1301 | 371 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000532317 | ENST00000393324 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - | 0.003689705 | 0.9963103 |
ENST00000532317 | ENST00000359636 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - | 0.003689705 | 0.9963103 |
ENST00000532317 | ENST00000543262 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - | 0.003654398 | 0.9963456 |
ENST00000532317 | ENST00000323418 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - | 0.004337799 | 0.99566215 |
ENST00000526033 | ENST00000393324 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - | 0.003890539 | 0.9961094 |
ENST00000526033 | ENST00000359636 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - | 0.003890539 | 0.9961094 |
ENST00000526033 | ENST00000543262 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - | 0.003852135 | 0.9961479 |
ENST00000526033 | ENST00000323418 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - | 0.004044503 | 0.99595547 |
ENST00000393346 | ENST00000393324 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - | 0.003822007 | 0.99617803 |
ENST00000393346 | ENST00000359636 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - | 0.003822007 | 0.99617803 |
ENST00000393346 | ENST00000543262 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - | 0.003786893 | 0.9962131 |
ENST00000393346 | ENST00000323418 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - | 0.0032401 | 0.99675995 |
ENST00000356360 | ENST00000393324 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - | 0.00417778 | 0.9958222 |
ENST00000356360 | ENST00000359636 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - | 0.00417778 | 0.9958222 |
ENST00000356360 | ENST00000543262 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - | 0.004131715 | 0.9958683 |
ENST00000356360 | ENST00000323418 | PICALM | chr11 | 85779693 | - | ME3 | chr11 | 86270865 | - | 0.00171119 | 0.9982888 |
ENST00000528398 | ENST00000393324 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - | 0.001100137 | 0.9988998 |
ENST00000528398 | ENST00000359636 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - | 0.001100137 | 0.9988998 |
ENST00000528398 | ENST00000543262 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - | 0.001094066 | 0.9989059 |
ENST00000528398 | ENST00000323418 | PICALM | chr11 | 85707868 | - | ME3 | chr11 | 86176242 | - | 0.00049692 | 0.999503 |
ENST00000528398 | ENST00000393324 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - | 0.001100137 | 0.9988998 |
ENST00000528398 | ENST00000359636 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - | 0.001100137 | 0.9988998 |
ENST00000528398 | ENST00000543262 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - | 0.001094066 | 0.9989059 |
ENST00000528398 | ENST00000323418 | PICALM | chr11 | 85707869 | - | ME3 | chr11 | 86176242 | - | 0.00049692 | 0.999503 |
Top |
Fusion Genomic Features for PICALM-ME3 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
Top |
Fusion Protein Features for PICALM-ME3 |
Go to FGviewer for the breakpoints of chr11:85779693-chr11:86270865 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | ME3 |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PICALM | chr11:85707868 | chr11:86176242 | ENST00000356360 | - | 12 | 19 | 14_145 | 419.3333333333333 | 633.0 | Domain | ENTH |
Hgene | PICALM | chr11:85707868 | chr11:86176242 | ENST00000393346 | - | 12 | 20 | 14_145 | 419.3333333333333 | 653.0 | Domain | ENTH |
Hgene | PICALM | chr11:85707868 | chr11:86176242 | ENST00000526033 | - | 12 | 20 | 14_145 | 419.3333333333333 | 646.0 | Domain | ENTH |
Hgene | PICALM | chr11:85707868 | chr11:86176242 | ENST00000528398 | - | 12 | 19 | 14_145 | 368.3333333333333 | 552.0 | Domain | ENTH |
Hgene | PICALM | chr11:85707868 | chr11:86176242 | ENST00000532317 | - | 12 | 20 | 14_145 | 419.3333333333333 | 611.0 | Domain | ENTH |
Hgene | PICALM | chr11:85707869 | chr11:86176242 | ENST00000356360 | - | 12 | 19 | 14_145 | 419.3333333333333 | 633.0 | Domain | ENTH |
Hgene | PICALM | chr11:85707869 | chr11:86176242 | ENST00000393346 | - | 12 | 20 | 14_145 | 419.3333333333333 | 653.0 | Domain | ENTH |
Hgene | PICALM | chr11:85707869 | chr11:86176242 | ENST00000526033 | - | 12 | 20 | 14_145 | 419.3333333333333 | 646.0 | Domain | ENTH |
Hgene | PICALM | chr11:85707869 | chr11:86176242 | ENST00000528398 | - | 12 | 19 | 14_145 | 368.3333333333333 | 552.0 | Domain | ENTH |
Hgene | PICALM | chr11:85707869 | chr11:86176242 | ENST00000532317 | - | 12 | 20 | 14_145 | 419.3333333333333 | 611.0 | Domain | ENTH |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PICALM | chr11:85779693 | chr11:86270865 | ENST00000356360 | - | 1 | 19 | 14_145 | 43.333333333333336 | 633.0 | Domain | ENTH |
Hgene | PICALM | chr11:85779693 | chr11:86270865 | ENST00000393346 | - | 1 | 20 | 14_145 | 43.333333333333336 | 653.0 | Domain | ENTH |
Hgene | PICALM | chr11:85779693 | chr11:86270865 | ENST00000526033 | - | 1 | 20 | 14_145 | 43.333333333333336 | 646.0 | Domain | ENTH |
Hgene | PICALM | chr11:85779693 | chr11:86270865 | ENST00000528398 | - | 1 | 19 | 14_145 | 0 | 552.0 | Domain | ENTH |
Hgene | PICALM | chr11:85779693 | chr11:86270865 | ENST00000532317 | - | 1 | 20 | 14_145 | 43.333333333333336 | 611.0 | Domain | ENTH |
Top |
Fusion Gene Sequence for PICALM-ME3 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000532317_ENST00000393324_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(transcript)=2212nt_BP=409nt CTCTTACCCTGCCCGGCTCCAGCTGACCCGGGAAGGGGTGGGCTGAACTGAGGCGGGGGCAAGGGAGTGCCCGACATCTTGTCCGACTCC GCGGGTGACACGAGCCGGTTCTCTCTGGACTGGTGGCAGCGCGCGGCCCCGAACCGCGCCCCAGGCCGGCAGGCGGGGAAGGAGCCGGTG GGGGTAGGGGGTGCGGTGGGGGGTGGGGACCCTCCGGCTCTTGGGGGTCCCAGTCCCCGCCGGCTGCTGAGCGGGTGGGGTGGTGGAGGA GCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCGAATCACTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGC AAGGCCACGACCCACGAGATCATGGGGCCCAAGAAAAAGCACCTGGACTGGGATGGCCTTTACCCTTGAAGAAAGGCTGCAGCTTGGAAT CCACGGCCTAATCCCGCCCTGCTTTCTGAGCCAGGACGTCCAGCTCCTCCGAATCATGAGATATTACGAGCGGCAGCAGAGTGACCTGGA CAAGTACATCATTCTCATGACACTCCAAGACCGGAACGAGAAGCTCTTCTACCGAGTGCTGACTTCGGACGTGGAGAAGTTCATGCCAAT CGTGTACACGCCTACCGTGGGGCTGGCCTGTCAGCACTATGGCCTGACTTTCCGCAGGCCCCGTGGACTGTTCATCACCATTCATGACAA AGGTCATCTTGCAACAATGCTGAATTCTTGGCCAGAAGACAATATTAAGGCCGTGGTGGTGACTGATGGGGAGCGCATCCTGGGCCTGGG AGACCTGGGCTGCTACGGCATGGGCATCCCTGTGGGCAAGCTGGCCCTGTACACGGCATGCGGAGGGGTGAACCCGCAGCAGTGCCTCCC TGTGCTGCTGGACGTCGGCACCAACAATGAGGAGCTGCTCAGAGACCCTCTGTACATCGGCCTGAAACACCAGCGCGTGCACGGGAAGGC ATACGATGACTTGCTGGATGAGTTCATGCAGGCTGTGACAGACAAGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGC CAATGCCTTCCGCCTGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGG GATCTTGGCTGCTCTGCGAATCACCAAGAACAAGCTTTCCAATCACGTGTTTGTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGC CCACCTCCTTGTCATGGCCCTAGAGAAAGAAGGTGTACCGAAGGCAGAGGCCACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCAT TGTCAAGGGGAGGAGCCACCTGAACCATGAAAAGGAGATGTTTGCCCAAGACCATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCT GGTGAAGCCCACAGCCATCATAGGTGTTGCTGCCATCGCAGGAGCCTTCACGGAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCG CCCTATCATCTTTGCCCTGAGCAACCCCACCAGCAAGGCCGAGTGCACGGCTGAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTT TGCCAGTGGAAGTCCTTTTAAGAGTGTGACTCTGGAAGATGGCAAGACCTTCATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGG GGTGGCACTGGGAGTCATCGCCGGCGGGATCCGGCACATCCCAGATGAGATCTTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTC TGAGCAGCATCTGTCCCAGGGGAGACTCTACCCACCACTCAGCACCATCCGAGACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTA CGCGTACAAACACAACCTGGCTTCCTACTACCCAGAGCCTAAGGACAAGGAGGCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGA CTCCTTTACACTGGACAGCTACACTTGGCCCAAGGAAGCCATGAATGTTCAGACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAG ATGAAGCCCAGAGTAACACCCACAATATAAATGGGTTCCAAAATGGCCCAAGTGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCT >In-frame_ENST00000532317_ENST00000393324_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(amino acids)=576AA_start in transcript=310_stop in transcript=2040 MPPSTVSPALPYPRQYARPRPTRSWGPRKSTWTGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNE KLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGK LALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKY CMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEM FAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLED GKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEP -------------------------------------------------------------- >In-frame_ENST00000532317_ENST00000359636_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(transcript)=2212nt_BP=409nt CTCTTACCCTGCCCGGCTCCAGCTGACCCGGGAAGGGGTGGGCTGAACTGAGGCGGGGGCAAGGGAGTGCCCGACATCTTGTCCGACTCC GCGGGTGACACGAGCCGGTTCTCTCTGGACTGGTGGCAGCGCGCGGCCCCGAACCGCGCCCCAGGCCGGCAGGCGGGGAAGGAGCCGGTG GGGGTAGGGGGTGCGGTGGGGGGTGGGGACCCTCCGGCTCTTGGGGGTCCCAGTCCCCGCCGGCTGCTGAGCGGGTGGGGTGGTGGAGGA GCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCGAATCACTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGC AAGGCCACGACCCACGAGATCATGGGGCCCAAGAAAAAGCACCTGGACTGGGATGGCCTTTACCCTTGAAGAAAGGCTGCAGCTTGGAAT CCACGGCCTAATCCCGCCCTGCTTTCTGAGCCAGGACGTCCAGCTCCTCCGAATCATGAGATATTACGAGCGGCAGCAGAGTGACCTGGA CAAGTACATCATTCTCATGACACTCCAAGACCGGAACGAGAAGCTCTTCTACCGAGTGCTGACTTCGGACGTGGAGAAGTTCATGCCAAT CGTGTACACGCCTACCGTGGGGCTGGCCTGTCAGCACTATGGCCTGACTTTCCGCAGGCCCCGTGGACTGTTCATCACCATTCATGACAA AGGTCATCTTGCAACAATGCTGAATTCTTGGCCAGAAGACAATATTAAGGCCGTGGTGGTGACTGATGGGGAGCGCATCCTGGGCCTGGG AGACCTGGGCTGCTACGGCATGGGCATCCCTGTGGGCAAGCTGGCCCTGTACACGGCATGCGGAGGGGTGAACCCGCAGCAGTGCCTCCC TGTGCTGCTGGACGTCGGCACCAACAATGAGGAGCTGCTCAGAGACCCTCTGTACATCGGCCTGAAACACCAGCGCGTGCACGGGAAGGC ATACGATGACTTGCTGGATGAGTTCATGCAGGCTGTGACAGACAAGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGC CAATGCCTTCCGCCTGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGG GATCTTGGCTGCTCTGCGAATCACCAAGAACAAGCTTTCCAATCACGTGTTTGTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGC CCACCTCCTTGTCATGGCCCTAGAGAAAGAAGGTGTACCGAAGGCAGAGGCCACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCAT TGTCAAGGGGAGGAGCCACCTGAACCATGAAAAGGAGATGTTTGCCCAAGACCATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCT GGTGAAGCCCACAGCCATCATAGGTGTTGCTGCCATCGCAGGAGCCTTCACGGAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCG CCCTATCATCTTTGCCCTGAGCAACCCCACCAGCAAGGCCGAGTGCACGGCTGAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTT TGCCAGTGGAAGTCCTTTTAAGAGTGTGACTCTGGAAGATGGCAAGACCTTCATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGG GGTGGCACTGGGAGTCATCGCCGGCGGGATCCGGCACATCCCAGATGAGATCTTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTC TGAGCAGCATCTGTCCCAGGGGAGACTCTACCCACCACTCAGCACCATCCGAGACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTA CGCGTACAAACACAACCTGGCTTCCTACTACCCAGAGCCTAAGGACAAGGAGGCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGA CTCCTTTACACTGGACAGCTACACTTGGCCCAAGGAAGCCATGAATGTTCAGACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAG ATGAAGCCCAGAGTAACACCCACAATATAAATGGGTTCCAAAATGGCCCAAGTGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCT >In-frame_ENST00000532317_ENST00000359636_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(amino acids)=576AA_start in transcript=310_stop in transcript=2040 MPPSTVSPALPYPRQYARPRPTRSWGPRKSTWTGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNE KLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGK LALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKY CMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEM FAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLED GKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEP -------------------------------------------------------------- >In-frame_ENST00000532317_ENST00000543262_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(transcript)=2210nt_BP=409nt CTCTTACCCTGCCCGGCTCCAGCTGACCCGGGAAGGGGTGGGCTGAACTGAGGCGGGGGCAAGGGAGTGCCCGACATCTTGTCCGACTCC GCGGGTGACACGAGCCGGTTCTCTCTGGACTGGTGGCAGCGCGCGGCCCCGAACCGCGCCCCAGGCCGGCAGGCGGGGAAGGAGCCGGTG GGGGTAGGGGGTGCGGTGGGGGGTGGGGACCCTCCGGCTCTTGGGGGTCCCAGTCCCCGCCGGCTGCTGAGCGGGTGGGGTGGTGGAGGA GCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCGAATCACTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGC AAGGCCACGACCCACGAGATCATGGGGCCCAAGAAAAAGCACCTGGACTGGGATGGCCTTTACCCTTGAAGAAAGGCTGCAGCTTGGAAT CCACGGCCTAATCCCGCCCTGCTTTCTGAGCCAGGACGTCCAGCTCCTCCGAATCATGAGATATTACGAGCGGCAGCAGAGTGACCTGGA CAAGTACATCATTCTCATGACACTCCAAGACCGGAACGAGAAGCTCTTCTACCGAGTGCTGACTTCGGACGTGGAGAAGTTCATGCCAAT CGTGTACACGCCTACCGTGGGGCTGGCCTGTCAGCACTATGGCCTGACTTTCCGCAGGCCCCGTGGACTGTTCATCACCATTCATGACAA AGGTCATCTTGCAACAATGCTGAATTCTTGGCCAGAAGACAATATTAAGGCCGTGGTGGTGACTGATGGGGAGCGCATCCTGGGCCTGGG AGACCTGGGCTGCTACGGCATGGGCATCCCTGTGGGCAAGCTGGCCCTGTACACGGCATGCGGAGGGGTGAACCCGCAGCAGTGCCTCCC TGTGCTGCTGGACGTCGGCACCAACAATGAGGAGCTGCTCAGAGACCCTCTGTACATCGGCCTGAAACACCAGCGCGTGCACGGGAAGGC ATACGATGACTTGCTGGATGAGTTCATGCAGGCTGTGACAGACAAGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGC CAATGCCTTCCGCCTGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGG GATCTTGGCTGCTCTGCGAATCACCAAGAACAAGCTTTCCAATCACGTGTTTGTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGC CCACCTCCTTGTCATGGCCCTAGAGAAAGAAGGTGTACCGAAGGCAGAGGCCACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCAT TGTCAAGGGGAGGAGCCACCTGAACCATGAAAAGGAGATGTTTGCCCAAGACCATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCT GGTGAAGCCCACAGCCATCATAGGTGTTGCTGCCATCGCAGGAGCCTTCACGGAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCG CCCTATCATCTTTGCCCTGAGCAACCCCACCAGCAAGGCCGAGTGCACGGCTGAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTT TGCCAGTGGAAGTCCTTTTAAGAGTGTGACTCTGGAAGATGGCAAGACCTTCATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGG GGTGGCACTGGGAGTCATCGCCGGCGGGATCCGGCACATCCCAGATGAGATCTTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTC TGAGCAGCATCTGTCCCAGGGGAGACTCTACCCACCACTCAGCACCATCCGAGACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTA CGCGTACAAACACAACCTGGCTTCCTACTACCCAGAGCCTAAGGACAAGGAGGCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGA CTCCTTTACACTGGACAGCTACACTTGGCCCAAGGAAGCCATGAATGTTCAGACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAG ATGAAGCCCAGAGTAACACCCACAATATAAATGGGTTCCAAAATGGCCCAAGTGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCT >In-frame_ENST00000532317_ENST00000543262_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(amino acids)=576AA_start in transcript=310_stop in transcript=2040 MPPSTVSPALPYPRQYARPRPTRSWGPRKSTWTGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNE KLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGK LALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKY CMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEM FAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLED GKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEP -------------------------------------------------------------- >In-frame_ENST00000532317_ENST00000323418_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(transcript)=1189nt_BP=409nt CTCTTACCCTGCCCGGCTCCAGCTGACCCGGGAAGGGGTGGGCTGAACTGAGGCGGGGGCAAGGGAGTGCCCGACATCTTGTCCGACTCC GCGGGTGACACGAGCCGGTTCTCTCTGGACTGGTGGCAGCGCGCGGCCCCGAACCGCGCCCCAGGCCGGCAGGCGGGGAAGGAGCCGGTG GGGGTAGGGGGTGCGGTGGGGGGTGGGGACCCTCCGGCTCTTGGGGGTCCCAGTCCCCGCCGGCTGCTGAGCGGGTGGGGTGGTGGAGGA GCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCGAATCACTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGC AAGGCCACGACCCACGAGATCATGGGGCCCAAGAAAAAGCACCTGGACTATGGCCTTTACCCTTGAAGAAAGGCTGCAGCTTGGAATCCA CGGCCTAATCCCGCCCTGCTTTCTGAGCCAGGACGTCCAGCTCCTCCGAATCATGAGATATTACGAGCGGCAGCAGAGTGACCTGGACAA GTACATCATTCTCATGACACTCCAAGACCGGAACGAGAAGCTCTTCTACCGAGTGCTGACTTCGGACGTGGAGAAGTTCATGCCAATCGT GTACACGCCTACCGTGGGGCTGGCCTGTCAGCACTATGGCCTGACTTTCCGCAGGCCCCGTGGACTGTTCATCACCATTCATGACAAAGG TCATCTTGCAACAATGCTGAATTCTTGGCCAGAAGACAATATTAAGGCCGTGGTGGTGACTGATGGGGAGCGCATCCTGGGCCTGGGAGA CCTGGGCTGCTACGGCATGGGCATCCCTGTGGGCAAGCTGGCCCTGTACACGGCATGCGGAGGGGTGAACCCGCAGCAGTGCCTCCCTGT GCTGCTGGACGTCGGCACCAACAATGAGGAGCTGCTCAGAGACCCTCTGTACATCGGCCTGAAACACCAGCGCGTGCACGGGAAGGCATA CGATGACTTGCTGGATGAGTTCATGCAGGCTGTGACAGACAAGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAA TGCCTTCCGCCTGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGATGACATCCAAGATGACTTCTCCAGAGGCCCAAAGAGGTC >In-frame_ENST00000532317_ENST00000323418_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(amino acids)=293AA_start in transcript=310_stop in transcript=1188 MPPSTVSPALPYPRQYARPRPTRSWGPRKSTWTMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEK LFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKL ALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYC -------------------------------------------------------------- >In-frame_ENST00000526033_ENST00000393324_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(transcript)=2250nt_BP=447nt GGAGCCTGGCGCCGCCATTTTCCTGCAGCTGCCTGTTCCTCTTACCCTGCCCGGCTCCAGCTGACCCGGGAAGGGGTGGGCTGAACTGAG GCGGGGGCAAGGGAGTGCCCGACATCTTGTCCGACTCCGCGGGTGACACGAGCCGGTTCTCTCTGGACTGGTGGCAGCGCGCGGCCCCGA ACCGCGCCCCAGGCCGGCAGGCGGGGAAGGAGCCGGTGGGGGTAGGGGGTGCGGTGGGGGGTGGGGACCCTCCGGCTCTTGGGGGTCCCA GTCCCCGCCGGCTGCTGAGCGGGTGGGGTGGTGGAGGAGCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCGAATCACTGCCGCCCAGC ACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACGACCCACGAGATCATGGGGCCCAAGAAAAAGCACCTGGACTGGG ATGGCCTTTACCCTTGAAGAAAGGCTGCAGCTTGGAATCCACGGCCTAATCCCGCCCTGCTTTCTGAGCCAGGACGTCCAGCTCCTCCGA ATCATGAGATATTACGAGCGGCAGCAGAGTGACCTGGACAAGTACATCATTCTCATGACACTCCAAGACCGGAACGAGAAGCTCTTCTAC CGAGTGCTGACTTCGGACGTGGAGAAGTTCATGCCAATCGTGTACACGCCTACCGTGGGGCTGGCCTGTCAGCACTATGGCCTGACTTTC CGCAGGCCCCGTGGACTGTTCATCACCATTCATGACAAAGGTCATCTTGCAACAATGCTGAATTCTTGGCCAGAAGACAATATTAAGGCC GTGGTGGTGACTGATGGGGAGCGCATCCTGGGCCTGGGAGACCTGGGCTGCTACGGCATGGGCATCCCTGTGGGCAAGCTGGCCCTGTAC ACGGCATGCGGAGGGGTGAACCCGCAGCAGTGCCTCCCTGTGCTGCTGGACGTCGGCACCAACAATGAGGAGCTGCTCAGAGACCCTCTG TACATCGGCCTGAAACACCAGCGCGTGCACGGGAAGGCATACGATGACTTGCTGGATGAGTTCATGCAGGCTGTGACAGACAAGTTTGGA ATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCGCCTGCTCAACAAATACCGTAACAAGTACTGCATGTTCAAT GATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGGGATCTTGGCTGCTCTGCGAATCACCAAGAACAAGCTTTCCAATCACGTGTTT GTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGCCCACCTCCTTGTCATGGCCCTAGAGAAAGAAGGTGTACCGAAGGCAGAGGCC ACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCATTGTCAAGGGGAGGAGCCACCTGAACCATGAAAAGGAGATGTTTGCCCAAGAC CATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCTGGTGAAGCCCACAGCCATCATAGGTGTTGCTGCCATCGCAGGAGCCTTCACG GAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCGCCCTATCATCTTTGCCCTGAGCAACCCCACCAGCAAGGCCGAGTGCACGGCT GAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTTTGCCAGTGGAAGTCCTTTTAAGAGTGTGACTCTGGAAGATGGCAAGACCTTC ATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGGGGTGGCACTGGGAGTCATCGCCGGCGGGATCCGGCACATCCCAGATGAGATC TTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTCTGAGCAGCATCTGTCCCAGGGGAGACTCTACCCACCACTCAGCACCATCCGA GACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTACGCGTACAAACACAACCTGGCTTCCTACTACCCAGAGCCTAAGGACAAGGAG GCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGACTCCTTTACACTGGACAGCTACACTTGGCCCAAGGAAGCCATGAATGTTCAG ACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAGATGAAGCCCAGAGTAACACCCACAATATAAATGGGTTCCAAAATGGCCCAAG TGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCTGGTGTGAGAGGAGATGCCAAGGCATACAGTGAATAAAAGCCTTGTCTCTGAA >In-frame_ENST00000526033_ENST00000393324_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(amino acids)=576AA_start in transcript=348_stop in transcript=2078 MPPSTVSPALPYPRQYARPRPTRSWGPRKSTWTGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNE KLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGK LALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKY CMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEM FAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLED GKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEP -------------------------------------------------------------- >In-frame_ENST00000526033_ENST00000359636_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(transcript)=2250nt_BP=447nt GGAGCCTGGCGCCGCCATTTTCCTGCAGCTGCCTGTTCCTCTTACCCTGCCCGGCTCCAGCTGACCCGGGAAGGGGTGGGCTGAACTGAG GCGGGGGCAAGGGAGTGCCCGACATCTTGTCCGACTCCGCGGGTGACACGAGCCGGTTCTCTCTGGACTGGTGGCAGCGCGCGGCCCCGA ACCGCGCCCCAGGCCGGCAGGCGGGGAAGGAGCCGGTGGGGGTAGGGGGTGCGGTGGGGGGTGGGGACCCTCCGGCTCTTGGGGGTCCCA GTCCCCGCCGGCTGCTGAGCGGGTGGGGTGGTGGAGGAGCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCGAATCACTGCCGCCCAGC ACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACGACCCACGAGATCATGGGGCCCAAGAAAAAGCACCTGGACTGGG ATGGCCTTTACCCTTGAAGAAAGGCTGCAGCTTGGAATCCACGGCCTAATCCCGCCCTGCTTTCTGAGCCAGGACGTCCAGCTCCTCCGA ATCATGAGATATTACGAGCGGCAGCAGAGTGACCTGGACAAGTACATCATTCTCATGACACTCCAAGACCGGAACGAGAAGCTCTTCTAC CGAGTGCTGACTTCGGACGTGGAGAAGTTCATGCCAATCGTGTACACGCCTACCGTGGGGCTGGCCTGTCAGCACTATGGCCTGACTTTC CGCAGGCCCCGTGGACTGTTCATCACCATTCATGACAAAGGTCATCTTGCAACAATGCTGAATTCTTGGCCAGAAGACAATATTAAGGCC GTGGTGGTGACTGATGGGGAGCGCATCCTGGGCCTGGGAGACCTGGGCTGCTACGGCATGGGCATCCCTGTGGGCAAGCTGGCCCTGTAC ACGGCATGCGGAGGGGTGAACCCGCAGCAGTGCCTCCCTGTGCTGCTGGACGTCGGCACCAACAATGAGGAGCTGCTCAGAGACCCTCTG TACATCGGCCTGAAACACCAGCGCGTGCACGGGAAGGCATACGATGACTTGCTGGATGAGTTCATGCAGGCTGTGACAGACAAGTTTGGA ATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCGCCTGCTCAACAAATACCGTAACAAGTACTGCATGTTCAAT GATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGGGATCTTGGCTGCTCTGCGAATCACCAAGAACAAGCTTTCCAATCACGTGTTT GTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGCCCACCTCCTTGTCATGGCCCTAGAGAAAGAAGGTGTACCGAAGGCAGAGGCC ACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCATTGTCAAGGGGAGGAGCCACCTGAACCATGAAAAGGAGATGTTTGCCCAAGAC CATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCTGGTGAAGCCCACAGCCATCATAGGTGTTGCTGCCATCGCAGGAGCCTTCACG GAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCGCCCTATCATCTTTGCCCTGAGCAACCCCACCAGCAAGGCCGAGTGCACGGCT GAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTTTGCCAGTGGAAGTCCTTTTAAGAGTGTGACTCTGGAAGATGGCAAGACCTTC ATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGGGGTGGCACTGGGAGTCATCGCCGGCGGGATCCGGCACATCCCAGATGAGATC TTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTCTGAGCAGCATCTGTCCCAGGGGAGACTCTACCCACCACTCAGCACCATCCGA GACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTACGCGTACAAACACAACCTGGCTTCCTACTACCCAGAGCCTAAGGACAAGGAG GCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGACTCCTTTACACTGGACAGCTACACTTGGCCCAAGGAAGCCATGAATGTTCAG ACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAGATGAAGCCCAGAGTAACACCCACAATATAAATGGGTTCCAAAATGGCCCAAG TGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCTGGTGTGAGAGGAGATGCCAAGGCATACAGTGAATAAAAGCCTTGTCTCTGAA >In-frame_ENST00000526033_ENST00000359636_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(amino acids)=576AA_start in transcript=348_stop in transcript=2078 MPPSTVSPALPYPRQYARPRPTRSWGPRKSTWTGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNE KLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGK LALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKY CMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEM FAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLED GKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEP -------------------------------------------------------------- >In-frame_ENST00000526033_ENST00000543262_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(transcript)=2248nt_BP=447nt GGAGCCTGGCGCCGCCATTTTCCTGCAGCTGCCTGTTCCTCTTACCCTGCCCGGCTCCAGCTGACCCGGGAAGGGGTGGGCTGAACTGAG GCGGGGGCAAGGGAGTGCCCGACATCTTGTCCGACTCCGCGGGTGACACGAGCCGGTTCTCTCTGGACTGGTGGCAGCGCGCGGCCCCGA ACCGCGCCCCAGGCCGGCAGGCGGGGAAGGAGCCGGTGGGGGTAGGGGGTGCGGTGGGGGGTGGGGACCCTCCGGCTCTTGGGGGTCCCA GTCCCCGCCGGCTGCTGAGCGGGTGGGGTGGTGGAGGAGCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCGAATCACTGCCGCCCAGC ACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACGACCCACGAGATCATGGGGCCCAAGAAAAAGCACCTGGACTGGG ATGGCCTTTACCCTTGAAGAAAGGCTGCAGCTTGGAATCCACGGCCTAATCCCGCCCTGCTTTCTGAGCCAGGACGTCCAGCTCCTCCGA ATCATGAGATATTACGAGCGGCAGCAGAGTGACCTGGACAAGTACATCATTCTCATGACACTCCAAGACCGGAACGAGAAGCTCTTCTAC CGAGTGCTGACTTCGGACGTGGAGAAGTTCATGCCAATCGTGTACACGCCTACCGTGGGGCTGGCCTGTCAGCACTATGGCCTGACTTTC CGCAGGCCCCGTGGACTGTTCATCACCATTCATGACAAAGGTCATCTTGCAACAATGCTGAATTCTTGGCCAGAAGACAATATTAAGGCC GTGGTGGTGACTGATGGGGAGCGCATCCTGGGCCTGGGAGACCTGGGCTGCTACGGCATGGGCATCCCTGTGGGCAAGCTGGCCCTGTAC ACGGCATGCGGAGGGGTGAACCCGCAGCAGTGCCTCCCTGTGCTGCTGGACGTCGGCACCAACAATGAGGAGCTGCTCAGAGACCCTCTG TACATCGGCCTGAAACACCAGCGCGTGCACGGGAAGGCATACGATGACTTGCTGGATGAGTTCATGCAGGCTGTGACAGACAAGTTTGGA ATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCGCCTGCTCAACAAATACCGTAACAAGTACTGCATGTTCAAT GATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGGGATCTTGGCTGCTCTGCGAATCACCAAGAACAAGCTTTCCAATCACGTGTTT GTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGCCCACCTCCTTGTCATGGCCCTAGAGAAAGAAGGTGTACCGAAGGCAGAGGCC ACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCATTGTCAAGGGGAGGAGCCACCTGAACCATGAAAAGGAGATGTTTGCCCAAGAC CATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCTGGTGAAGCCCACAGCCATCATAGGTGTTGCTGCCATCGCAGGAGCCTTCACG GAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCGCCCTATCATCTTTGCCCTGAGCAACCCCACCAGCAAGGCCGAGTGCACGGCT GAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTTTGCCAGTGGAAGTCCTTTTAAGAGTGTGACTCTGGAAGATGGCAAGACCTTC ATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGGGGTGGCACTGGGAGTCATCGCCGGCGGGATCCGGCACATCCCAGATGAGATC TTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTCTGAGCAGCATCTGTCCCAGGGGAGACTCTACCCACCACTCAGCACCATCCGA GACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTACGCGTACAAACACAACCTGGCTTCCTACTACCCAGAGCCTAAGGACAAGGAG GCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGACTCCTTTACACTGGACAGCTACACTTGGCCCAAGGAAGCCATGAATGTTCAG ACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAGATGAAGCCCAGAGTAACACCCACAATATAAATGGGTTCCAAAATGGCCCAAG >In-frame_ENST00000526033_ENST00000543262_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(amino acids)=576AA_start in transcript=348_stop in transcript=2078 MPPSTVSPALPYPRQYARPRPTRSWGPRKSTWTGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNE KLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGK LALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKY CMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEM FAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLED GKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEP -------------------------------------------------------------- >In-frame_ENST00000526033_ENST00000323418_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(transcript)=1227nt_BP=447nt GGAGCCTGGCGCCGCCATTTTCCTGCAGCTGCCTGTTCCTCTTACCCTGCCCGGCTCCAGCTGACCCGGGAAGGGGTGGGCTGAACTGAG GCGGGGGCAAGGGAGTGCCCGACATCTTGTCCGACTCCGCGGGTGACACGAGCCGGTTCTCTCTGGACTGGTGGCAGCGCGCGGCCCCGA ACCGCGCCCCAGGCCGGCAGGCGGGGAAGGAGCCGGTGGGGGTAGGGGGTGCGGTGGGGGGTGGGGACCCTCCGGCTCTTGGGGGTCCCA GTCCCCGCCGGCTGCTGAGCGGGTGGGGTGGTGGAGGAGCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCGAATCACTGCCGCCCAGC ACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACGACCCACGAGATCATGGGGCCCAAGAAAAAGCACCTGGACTATG GCCTTTACCCTTGAAGAAAGGCTGCAGCTTGGAATCCACGGCCTAATCCCGCCCTGCTTTCTGAGCCAGGACGTCCAGCTCCTCCGAATC ATGAGATATTACGAGCGGCAGCAGAGTGACCTGGACAAGTACATCATTCTCATGACACTCCAAGACCGGAACGAGAAGCTCTTCTACCGA GTGCTGACTTCGGACGTGGAGAAGTTCATGCCAATCGTGTACACGCCTACCGTGGGGCTGGCCTGTCAGCACTATGGCCTGACTTTCCGC AGGCCCCGTGGACTGTTCATCACCATTCATGACAAAGGTCATCTTGCAACAATGCTGAATTCTTGGCCAGAAGACAATATTAAGGCCGTG GTGGTGACTGATGGGGAGCGCATCCTGGGCCTGGGAGACCTGGGCTGCTACGGCATGGGCATCCCTGTGGGCAAGCTGGCCCTGTACACG GCATGCGGAGGGGTGAACCCGCAGCAGTGCCTCCCTGTGCTGCTGGACGTCGGCACCAACAATGAGGAGCTGCTCAGAGACCCTCTGTAC ATCGGCCTGAAACACCAGCGCGTGCACGGGAAGGCATACGATGACTTGCTGGATGAGTTCATGCAGGCTGTGACAGACAAGTTTGGAATA AATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCGCCTGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGAT >In-frame_ENST00000526033_ENST00000323418_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(amino acids)=292AA_start in transcript=348_stop in transcript=1226 MPPSTVSPALPYPRQYARPRPTRSWGPRKSTWTMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEK LFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKL ALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYC -------------------------------------------------------------- >In-frame_ENST00000393346_ENST00000393324_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(transcript)=2082nt_BP=279nt GCGCGGCCCCGAACCGCGCCCCAGGCCGGCAGGCGGGGAAGGAGCCGGTGGGGGTAGGGGGTGCGGTGGGGGGTGGGGACCCTCCGGCTC TTGGGGGTCCCAGTCCCCGCCGGCTGCTGAGCGGGTGGGGTGGTGGAGGAGCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCGAATCA CTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACGACCCACGAGATCATGGGGCCCAAGAAAAAGC ACCTGGACTGGGATGGCCTTTACCCTTGAAGAAAGGCTGCAGCTTGGAATCCACGGCCTAATCCCGCCCTGCTTTCTGAGCCAGGACGTC CAGCTCCTCCGAATCATGAGATATTACGAGCGGCAGCAGAGTGACCTGGACAAGTACATCATTCTCATGACACTCCAAGACCGGAACGAG AAGCTCTTCTACCGAGTGCTGACTTCGGACGTGGAGAAGTTCATGCCAATCGTGTACACGCCTACCGTGGGGCTGGCCTGTCAGCACTAT GGCCTGACTTTCCGCAGGCCCCGTGGACTGTTCATCACCATTCATGACAAAGGTCATCTTGCAACAATGCTGAATTCTTGGCCAGAAGAC AATATTAAGGCCGTGGTGGTGACTGATGGGGAGCGCATCCTGGGCCTGGGAGACCTGGGCTGCTACGGCATGGGCATCCCTGTGGGCAAG CTGGCCCTGTACACGGCATGCGGAGGGGTGAACCCGCAGCAGTGCCTCCCTGTGCTGCTGGACGTCGGCACCAACAATGAGGAGCTGCTC AGAGACCCTCTGTACATCGGCCTGAAACACCAGCGCGTGCACGGGAAGGCATACGATGACTTGCTGGATGAGTTCATGCAGGCTGTGACA GACAAGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCGCCTGCTCAACAAATACCGTAACAAGTAC TGCATGTTCAATGATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGGGATCTTGGCTGCTCTGCGAATCACCAAGAACAAGCTTTCC AATCACGTGTTTGTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGCCCACCTCCTTGTCATGGCCCTAGAGAAAGAAGGTGTACCG AAGGCAGAGGCCACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCATTGTCAAGGGGAGGAGCCACCTGAACCATGAAAAGGAGATG TTTGCCCAAGACCATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCTGGTGAAGCCCACAGCCATCATAGGTGTTGCTGCCATCGCA GGAGCCTTCACGGAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCGCCCTATCATCTTTGCCCTGAGCAACCCCACCAGCAAGGCC GAGTGCACGGCTGAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTTTGCCAGTGGAAGTCCTTTTAAGAGTGTGACTCTGGAAGAT GGCAAGACCTTCATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGGGGTGGCACTGGGAGTCATCGCCGGCGGGATCCGGCACATC CCAGATGAGATCTTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTCTGAGCAGCATCTGTCCCAGGGGAGACTCTACCCACCACTC AGCACCATCCGAGACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTACGCGTACAAACACAACCTGGCTTCCTACTACCCAGAGCCT AAGGACAAGGAGGCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGACTCCTTTACACTGGACAGCTACACTTGGCCCAAGGAAGCC ATGAATGTTCAGACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAGATGAAGCCCAGAGTAACACCCACAATATAAATGGGTTCCA AAATGGCCCAAGTGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCTGGTGTGAGAGGAGATGCCAAGGCATACAGTGAATAAAAGC >In-frame_ENST00000393346_ENST00000393324_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(amino acids)=576AA_start in transcript=180_stop in transcript=1910 MPPSTVSPALPYPRQYARPRPTRSWGPRKSTWTGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNE KLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGK LALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKY CMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEM FAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLED GKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEP -------------------------------------------------------------- >In-frame_ENST00000393346_ENST00000359636_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(transcript)=2082nt_BP=279nt GCGCGGCCCCGAACCGCGCCCCAGGCCGGCAGGCGGGGAAGGAGCCGGTGGGGGTAGGGGGTGCGGTGGGGGGTGGGGACCCTCCGGCTC TTGGGGGTCCCAGTCCCCGCCGGCTGCTGAGCGGGTGGGGTGGTGGAGGAGCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCGAATCA CTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACGACCCACGAGATCATGGGGCCCAAGAAAAAGC ACCTGGACTGGGATGGCCTTTACCCTTGAAGAAAGGCTGCAGCTTGGAATCCACGGCCTAATCCCGCCCTGCTTTCTGAGCCAGGACGTC CAGCTCCTCCGAATCATGAGATATTACGAGCGGCAGCAGAGTGACCTGGACAAGTACATCATTCTCATGACACTCCAAGACCGGAACGAG AAGCTCTTCTACCGAGTGCTGACTTCGGACGTGGAGAAGTTCATGCCAATCGTGTACACGCCTACCGTGGGGCTGGCCTGTCAGCACTAT GGCCTGACTTTCCGCAGGCCCCGTGGACTGTTCATCACCATTCATGACAAAGGTCATCTTGCAACAATGCTGAATTCTTGGCCAGAAGAC AATATTAAGGCCGTGGTGGTGACTGATGGGGAGCGCATCCTGGGCCTGGGAGACCTGGGCTGCTACGGCATGGGCATCCCTGTGGGCAAG CTGGCCCTGTACACGGCATGCGGAGGGGTGAACCCGCAGCAGTGCCTCCCTGTGCTGCTGGACGTCGGCACCAACAATGAGGAGCTGCTC AGAGACCCTCTGTACATCGGCCTGAAACACCAGCGCGTGCACGGGAAGGCATACGATGACTTGCTGGATGAGTTCATGCAGGCTGTGACA GACAAGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCGCCTGCTCAACAAATACCGTAACAAGTAC TGCATGTTCAATGATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGGGATCTTGGCTGCTCTGCGAATCACCAAGAACAAGCTTTCC AATCACGTGTTTGTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGCCCACCTCCTTGTCATGGCCCTAGAGAAAGAAGGTGTACCG AAGGCAGAGGCCACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCATTGTCAAGGGGAGGAGCCACCTGAACCATGAAAAGGAGATG TTTGCCCAAGACCATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCTGGTGAAGCCCACAGCCATCATAGGTGTTGCTGCCATCGCA GGAGCCTTCACGGAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCGCCCTATCATCTTTGCCCTGAGCAACCCCACCAGCAAGGCC GAGTGCACGGCTGAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTTTGCCAGTGGAAGTCCTTTTAAGAGTGTGACTCTGGAAGAT GGCAAGACCTTCATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGGGGTGGCACTGGGAGTCATCGCCGGCGGGATCCGGCACATC CCAGATGAGATCTTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTCTGAGCAGCATCTGTCCCAGGGGAGACTCTACCCACCACTC AGCACCATCCGAGACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTACGCGTACAAACACAACCTGGCTTCCTACTACCCAGAGCCT AAGGACAAGGAGGCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGACTCCTTTACACTGGACAGCTACACTTGGCCCAAGGAAGCC ATGAATGTTCAGACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAGATGAAGCCCAGAGTAACACCCACAATATAAATGGGTTCCA AAATGGCCCAAGTGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCTGGTGTGAGAGGAGATGCCAAGGCATACAGTGAATAAAAGC >In-frame_ENST00000393346_ENST00000359636_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(amino acids)=576AA_start in transcript=180_stop in transcript=1910 MPPSTVSPALPYPRQYARPRPTRSWGPRKSTWTGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNE KLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGK LALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKY CMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEM FAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLED GKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEP -------------------------------------------------------------- >In-frame_ENST00000393346_ENST00000543262_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(transcript)=2080nt_BP=279nt GCGCGGCCCCGAACCGCGCCCCAGGCCGGCAGGCGGGGAAGGAGCCGGTGGGGGTAGGGGGTGCGGTGGGGGGTGGGGACCCTCCGGCTC TTGGGGGTCCCAGTCCCCGCCGGCTGCTGAGCGGGTGGGGTGGTGGAGGAGCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCGAATCA CTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACGACCCACGAGATCATGGGGCCCAAGAAAAAGC ACCTGGACTGGGATGGCCTTTACCCTTGAAGAAAGGCTGCAGCTTGGAATCCACGGCCTAATCCCGCCCTGCTTTCTGAGCCAGGACGTC CAGCTCCTCCGAATCATGAGATATTACGAGCGGCAGCAGAGTGACCTGGACAAGTACATCATTCTCATGACACTCCAAGACCGGAACGAG AAGCTCTTCTACCGAGTGCTGACTTCGGACGTGGAGAAGTTCATGCCAATCGTGTACACGCCTACCGTGGGGCTGGCCTGTCAGCACTAT GGCCTGACTTTCCGCAGGCCCCGTGGACTGTTCATCACCATTCATGACAAAGGTCATCTTGCAACAATGCTGAATTCTTGGCCAGAAGAC AATATTAAGGCCGTGGTGGTGACTGATGGGGAGCGCATCCTGGGCCTGGGAGACCTGGGCTGCTACGGCATGGGCATCCCTGTGGGCAAG CTGGCCCTGTACACGGCATGCGGAGGGGTGAACCCGCAGCAGTGCCTCCCTGTGCTGCTGGACGTCGGCACCAACAATGAGGAGCTGCTC AGAGACCCTCTGTACATCGGCCTGAAACACCAGCGCGTGCACGGGAAGGCATACGATGACTTGCTGGATGAGTTCATGCAGGCTGTGACA GACAAGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCGCCTGCTCAACAAATACCGTAACAAGTAC TGCATGTTCAATGATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGGGATCTTGGCTGCTCTGCGAATCACCAAGAACAAGCTTTCC AATCACGTGTTTGTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGCCCACCTCCTTGTCATGGCCCTAGAGAAAGAAGGTGTACCG AAGGCAGAGGCCACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCATTGTCAAGGGGAGGAGCCACCTGAACCATGAAAAGGAGATG TTTGCCCAAGACCATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCTGGTGAAGCCCACAGCCATCATAGGTGTTGCTGCCATCGCA GGAGCCTTCACGGAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCGCCCTATCATCTTTGCCCTGAGCAACCCCACCAGCAAGGCC GAGTGCACGGCTGAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTTTGCCAGTGGAAGTCCTTTTAAGAGTGTGACTCTGGAAGAT GGCAAGACCTTCATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGGGGTGGCACTGGGAGTCATCGCCGGCGGGATCCGGCACATC CCAGATGAGATCTTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTCTGAGCAGCATCTGTCCCAGGGGAGACTCTACCCACCACTC AGCACCATCCGAGACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTACGCGTACAAACACAACCTGGCTTCCTACTACCCAGAGCCT AAGGACAAGGAGGCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGACTCCTTTACACTGGACAGCTACACTTGGCCCAAGGAAGCC ATGAATGTTCAGACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAGATGAAGCCCAGAGTAACACCCACAATATAAATGGGTTCCA AAATGGCCCAAGTGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCTGGTGTGAGAGGAGATGCCAAGGCATACAGTGAATAAAAGC >In-frame_ENST00000393346_ENST00000543262_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(amino acids)=576AA_start in transcript=180_stop in transcript=1910 MPPSTVSPALPYPRQYARPRPTRSWGPRKSTWTGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNE KLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGK LALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKY CMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEM FAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLED GKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEP -------------------------------------------------------------- >In-frame_ENST00000393346_ENST00000323418_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(transcript)=1059nt_BP=279nt GCGCGGCCCCGAACCGCGCCCCAGGCCGGCAGGCGGGGAAGGAGCCGGTGGGGGTAGGGGGTGCGGTGGGGGGTGGGGACCCTCCGGCTC TTGGGGGTCCCAGTCCCCGCCGGCTGCTGAGCGGGTGGGGTGGTGGAGGAGCTGCAGAGATGTCCGGCCAGAGCCTGACGGACCGAATCA CTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACGACCCACGAGATCATGGGGCCCAAGAAAAAGC ACCTGGACTATGGCCTTTACCCTTGAAGAAAGGCTGCAGCTTGGAATCCACGGCCTAATCCCGCCCTGCTTTCTGAGCCAGGACGTCCAG CTCCTCCGAATCATGAGATATTACGAGCGGCAGCAGAGTGACCTGGACAAGTACATCATTCTCATGACACTCCAAGACCGGAACGAGAAG CTCTTCTACCGAGTGCTGACTTCGGACGTGGAGAAGTTCATGCCAATCGTGTACACGCCTACCGTGGGGCTGGCCTGTCAGCACTATGGC CTGACTTTCCGCAGGCCCCGTGGACTGTTCATCACCATTCATGACAAAGGTCATCTTGCAACAATGCTGAATTCTTGGCCAGAAGACAAT ATTAAGGCCGTGGTGGTGACTGATGGGGAGCGCATCCTGGGCCTGGGAGACCTGGGCTGCTACGGCATGGGCATCCCTGTGGGCAAGCTG GCCCTGTACACGGCATGCGGAGGGGTGAACCCGCAGCAGTGCCTCCCTGTGCTGCTGGACGTCGGCACCAACAATGAGGAGCTGCTCAGA GACCCTCTGTACATCGGCCTGAAACACCAGCGCGTGCACGGGAAGGCATACGATGACTTGCTGGATGAGTTCATGCAGGCTGTGACAGAC AAGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCGCCTGCTCAACAAATACCGTAACAAGTACTGC >In-frame_ENST00000393346_ENST00000323418_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(amino acids)=292AA_start in transcript=180_stop in transcript=1058 MPPSTVSPALPYPRQYARPRPTRSWGPRKSTWTMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEK LFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKL ALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYC -------------------------------------------------------------- >In-frame_ENST00000356360_ENST00000393324_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(transcript)=1933nt_BP=130nt ATGTCCGGCCAGAGCCTGACGGACCGAATCACTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACG ACCCACGAGATCATGGGGCCCAAGAAAAAGCACCTGGACTGGGATGGCCTTTACCCTTGAAGAAAGGCTGCAGCTTGGAATCCACGGCCT AATCCCGCCCTGCTTTCTGAGCCAGGACGTCCAGCTCCTCCGAATCATGAGATATTACGAGCGGCAGCAGAGTGACCTGGACAAGTACAT CATTCTCATGACACTCCAAGACCGGAACGAGAAGCTCTTCTACCGAGTGCTGACTTCGGACGTGGAGAAGTTCATGCCAATCGTGTACAC GCCTACCGTGGGGCTGGCCTGTCAGCACTATGGCCTGACTTTCCGCAGGCCCCGTGGACTGTTCATCACCATTCATGACAAAGGTCATCT TGCAACAATGCTGAATTCTTGGCCAGAAGACAATATTAAGGCCGTGGTGGTGACTGATGGGGAGCGCATCCTGGGCCTGGGAGACCTGGG CTGCTACGGCATGGGCATCCCTGTGGGCAAGCTGGCCCTGTACACGGCATGCGGAGGGGTGAACCCGCAGCAGTGCCTCCCTGTGCTGCT GGACGTCGGCACCAACAATGAGGAGCTGCTCAGAGACCCTCTGTACATCGGCCTGAAACACCAGCGCGTGCACGGGAAGGCATACGATGA CTTGCTGGATGAGTTCATGCAGGCTGTGACAGACAAGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTT CCGCCTGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGGGATCTTGGC TGCTCTGCGAATCACCAAGAACAAGCTTTCCAATCACGTGTTTGTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGCCCACCTCCT TGTCATGGCCCTAGAGAAAGAAGGTGTACCGAAGGCAGAGGCCACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCATTGTCAAGGG GAGGAGCCACCTGAACCATGAAAAGGAGATGTTTGCCCAAGACCATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCTGGTGAAGCC CACAGCCATCATAGGTGTTGCTGCCATCGCAGGAGCCTTCACGGAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCGCCCTATCAT CTTTGCCCTGAGCAACCCCACCAGCAAGGCCGAGTGCACGGCTGAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTTTGCCAGTGG AAGTCCTTTTAAGAGTGTGACTCTGGAAGATGGCAAGACCTTCATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGGGGTGGCACT GGGAGTCATCGCCGGCGGGATCCGGCACATCCCAGATGAGATCTTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTCTGAGCAGCA TCTGTCCCAGGGGAGACTCTACCCACCACTCAGCACCATCCGAGACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTACGCGTACAA ACACAACCTGGCTTCCTACTACCCAGAGCCTAAGGACAAGGAGGCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGACTCCTTTAC ACTGGACAGCTACACTTGGCCCAAGGAAGCCATGAATGTTCAGACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAGATGAAGCCC AGAGTAACACCCACAATATAAATGGGTTCCAAAATGGCCCAAGTGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCTGGTGTGAGA >In-frame_ENST00000356360_ENST00000393324_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(amino acids)=576AA_start in transcript=31_stop in transcript=1761 MPPSTVSPALPYPRQYARPRPTRSWGPRKSTWTGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNE KLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGK LALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKY CMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEM FAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLED GKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEP -------------------------------------------------------------- >In-frame_ENST00000356360_ENST00000359636_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(transcript)=1933nt_BP=130nt ATGTCCGGCCAGAGCCTGACGGACCGAATCACTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACG ACCCACGAGATCATGGGGCCCAAGAAAAAGCACCTGGACTGGGATGGCCTTTACCCTTGAAGAAAGGCTGCAGCTTGGAATCCACGGCCT AATCCCGCCCTGCTTTCTGAGCCAGGACGTCCAGCTCCTCCGAATCATGAGATATTACGAGCGGCAGCAGAGTGACCTGGACAAGTACAT CATTCTCATGACACTCCAAGACCGGAACGAGAAGCTCTTCTACCGAGTGCTGACTTCGGACGTGGAGAAGTTCATGCCAATCGTGTACAC GCCTACCGTGGGGCTGGCCTGTCAGCACTATGGCCTGACTTTCCGCAGGCCCCGTGGACTGTTCATCACCATTCATGACAAAGGTCATCT TGCAACAATGCTGAATTCTTGGCCAGAAGACAATATTAAGGCCGTGGTGGTGACTGATGGGGAGCGCATCCTGGGCCTGGGAGACCTGGG CTGCTACGGCATGGGCATCCCTGTGGGCAAGCTGGCCCTGTACACGGCATGCGGAGGGGTGAACCCGCAGCAGTGCCTCCCTGTGCTGCT GGACGTCGGCACCAACAATGAGGAGCTGCTCAGAGACCCTCTGTACATCGGCCTGAAACACCAGCGCGTGCACGGGAAGGCATACGATGA CTTGCTGGATGAGTTCATGCAGGCTGTGACAGACAAGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTT CCGCCTGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGGGATCTTGGC TGCTCTGCGAATCACCAAGAACAAGCTTTCCAATCACGTGTTTGTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGCCCACCTCCT TGTCATGGCCCTAGAGAAAGAAGGTGTACCGAAGGCAGAGGCCACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCATTGTCAAGGG GAGGAGCCACCTGAACCATGAAAAGGAGATGTTTGCCCAAGACCATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCTGGTGAAGCC CACAGCCATCATAGGTGTTGCTGCCATCGCAGGAGCCTTCACGGAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCGCCCTATCAT CTTTGCCCTGAGCAACCCCACCAGCAAGGCCGAGTGCACGGCTGAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTTTGCCAGTGG AAGTCCTTTTAAGAGTGTGACTCTGGAAGATGGCAAGACCTTCATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGGGGTGGCACT GGGAGTCATCGCCGGCGGGATCCGGCACATCCCAGATGAGATCTTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTCTGAGCAGCA TCTGTCCCAGGGGAGACTCTACCCACCACTCAGCACCATCCGAGACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTACGCGTACAA ACACAACCTGGCTTCCTACTACCCAGAGCCTAAGGACAAGGAGGCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGACTCCTTTAC ACTGGACAGCTACACTTGGCCCAAGGAAGCCATGAATGTTCAGACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAGATGAAGCCC AGAGTAACACCCACAATATAAATGGGTTCCAAAATGGCCCAAGTGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCTGGTGTGAGA >In-frame_ENST00000356360_ENST00000359636_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(amino acids)=576AA_start in transcript=31_stop in transcript=1761 MPPSTVSPALPYPRQYARPRPTRSWGPRKSTWTGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNE KLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGK LALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKY CMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEM FAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLED GKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEP -------------------------------------------------------------- >In-frame_ENST00000356360_ENST00000543262_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(transcript)=1931nt_BP=130nt ATGTCCGGCCAGAGCCTGACGGACCGAATCACTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACG ACCCACGAGATCATGGGGCCCAAGAAAAAGCACCTGGACTGGGATGGCCTTTACCCTTGAAGAAAGGCTGCAGCTTGGAATCCACGGCCT AATCCCGCCCTGCTTTCTGAGCCAGGACGTCCAGCTCCTCCGAATCATGAGATATTACGAGCGGCAGCAGAGTGACCTGGACAAGTACAT CATTCTCATGACACTCCAAGACCGGAACGAGAAGCTCTTCTACCGAGTGCTGACTTCGGACGTGGAGAAGTTCATGCCAATCGTGTACAC GCCTACCGTGGGGCTGGCCTGTCAGCACTATGGCCTGACTTTCCGCAGGCCCCGTGGACTGTTCATCACCATTCATGACAAAGGTCATCT TGCAACAATGCTGAATTCTTGGCCAGAAGACAATATTAAGGCCGTGGTGGTGACTGATGGGGAGCGCATCCTGGGCCTGGGAGACCTGGG CTGCTACGGCATGGGCATCCCTGTGGGCAAGCTGGCCCTGTACACGGCATGCGGAGGGGTGAACCCGCAGCAGTGCCTCCCTGTGCTGCT GGACGTCGGCACCAACAATGAGGAGCTGCTCAGAGACCCTCTGTACATCGGCCTGAAACACCAGCGCGTGCACGGGAAGGCATACGATGA CTTGCTGGATGAGTTCATGCAGGCTGTGACAGACAAGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTT CCGCCTGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGGGATCTTGGC TGCTCTGCGAATCACCAAGAACAAGCTTTCCAATCACGTGTTTGTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGCCCACCTCCT TGTCATGGCCCTAGAGAAAGAAGGTGTACCGAAGGCAGAGGCCACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCATTGTCAAGGG GAGGAGCCACCTGAACCATGAAAAGGAGATGTTTGCCCAAGACCATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCTGGTGAAGCC CACAGCCATCATAGGTGTTGCTGCCATCGCAGGAGCCTTCACGGAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCGCCCTATCAT CTTTGCCCTGAGCAACCCCACCAGCAAGGCCGAGTGCACGGCTGAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTTTGCCAGTGG AAGTCCTTTTAAGAGTGTGACTCTGGAAGATGGCAAGACCTTCATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGGGGTGGCACT GGGAGTCATCGCCGGCGGGATCCGGCACATCCCAGATGAGATCTTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTCTGAGCAGCA TCTGTCCCAGGGGAGACTCTACCCACCACTCAGCACCATCCGAGACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTACGCGTACAA ACACAACCTGGCTTCCTACTACCCAGAGCCTAAGGACAAGGAGGCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGACTCCTTTAC ACTGGACAGCTACACTTGGCCCAAGGAAGCCATGAATGTTCAGACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAGATGAAGCCC AGAGTAACACCCACAATATAAATGGGTTCCAAAATGGCCCAAGTGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCTGGTGTGAGA >In-frame_ENST00000356360_ENST00000543262_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(amino acids)=576AA_start in transcript=31_stop in transcript=1761 MPPSTVSPALPYPRQYARPRPTRSWGPRKSTWTGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNE KLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGK LALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKY CMFNDDIQGTASVAVAGILAALRITKNKLSNHVFVFQGAGEAAMGIAHLLVMALEKEGVPKAEATRKIWMVDSKGLIVKGRSHLNHEKEM FAQDHPEVNSLEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRVTEGRGIFASGSPFKSVTLED GKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAEQIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEP -------------------------------------------------------------- >In-frame_ENST00000356360_ENST00000323418_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(transcript)=910nt_BP=130nt ATGTCCGGCCAGAGCCTGACGGACCGAATCACTGCCGCCCAGCACAGTGTCACCGGCTCTGCCGTATCCAAGACAGTATGCAAGGCCACG ACCCACGAGATCATGGGGCCCAAGAAAAAGCACCTGGACTATGGCCTTTACCCTTGAAGAAAGGCTGCAGCTTGGAATCCACGGCCTAAT CCCGCCCTGCTTTCTGAGCCAGGACGTCCAGCTCCTCCGAATCATGAGATATTACGAGCGGCAGCAGAGTGACCTGGACAAGTACATCAT TCTCATGACACTCCAAGACCGGAACGAGAAGCTCTTCTACCGAGTGCTGACTTCGGACGTGGAGAAGTTCATGCCAATCGTGTACACGCC TACCGTGGGGCTGGCCTGTCAGCACTATGGCCTGACTTTCCGCAGGCCCCGTGGACTGTTCATCACCATTCATGACAAAGGTCATCTTGC AACAATGCTGAATTCTTGGCCAGAAGACAATATTAAGGCCGTGGTGGTGACTGATGGGGAGCGCATCCTGGGCCTGGGAGACCTGGGCTG CTACGGCATGGGCATCCCTGTGGGCAAGCTGGCCCTGTACACGGCATGCGGAGGGGTGAACCCGCAGCAGTGCCTCCCTGTGCTGCTGGA CGTCGGCACCAACAATGAGGAGCTGCTCAGAGACCCTCTGTACATCGGCCTGAAACACCAGCGCGTGCACGGGAAGGCATACGATGACTT GCTGGATGAGTTCATGCAGGCTGTGACAGACAAGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCG CCTGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGATGACATCCAAGATGACTTCTCCAGAGGCCCAAAGAGGTCACAACTTTT >In-frame_ENST00000356360_ENST00000323418_TCGA-20-0987-01A_PICALM_chr11_85779693_-_ME3_chr11_86270865_length(amino acids)=293AA_start in transcript=31_stop in transcript=909 MPPSTVSPALPYPRQYARPRPTRSWGPRKSTWTMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEK LFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKL ALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYDDLLDEFMQAVTDKFGINCLIQFEDFANANAFRLLNKYRNKYC -------------------------------------------------------------- >In-frame_ENST00000528398_ENST00000393324_TCGA-VG-A8LO_PICALM_chr11_85707868_-_ME3_chr11_86176242_length(transcript)=2468nt_BP=1291nt TATGTGTTTCCTGTCCTATTCCACACCCTAGAGAATGAATACCGGCCAGCTAGTATCTAAATTTAGAATGGCAGCAACGTGTCGGGTTTT CGGAGTAGAGATAAACAAAACCAGGTGACATTTCCAAGCCTCTCAAGGAAAGGGGGGAAAAAACCTTTCTGGGACTTAATTCAGTGCACA AATGAGATGAATGTGAACATCCCACAGTTGGCAGACAGTTTATTTGAAAGAACTACTAATAGTAGTTGGGTGGTGGTCTTCAAATCTCTC ATTACAACTCATCATTTGATGGTGTATGGAAATGAGCGTTTTATTCAGTATTTGGCTTCAAGAAACACGTTGTTTAACTTAAGCAATTTT TTGGATAAAAGTGGATTGCAAGGATATGACATGTCTACATTTATTAGGCGGTATAGTAGATATTTAAATGAGAAAGCAGTTTCATACAGA CAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGGAGTTATGAGAACAATGAACACAGAAAAACTCCTAAAAACTGTACCA ATTATTCAGAATCAGATGGATGCACTTCTTGATTTTAATGTTAATAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTC CTGTTCAAAGATGCCATTAGACTGTTTGCAGCATACAATGAAGGAATTATTAATTTGTTGGAAAAATATTTTGATATGAAAAAGAACCAA TGCAAAGAAGGTCTTGACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTTGCAGAGCAAGTTGGAATT GACAGAGGTGATATACCAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAA ATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTG GATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAA CCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTTCTACC CCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCA ACTGCTTCTCAGGTAGCAAGTACATGGGGAGGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCGCC TGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGGGATCTTGGCTGCTC TGCGAATCACCAAGAACAAGCTTTCCAATCACGTGTTTGTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGCCCACCTCCTTGTCA TGGCCCTAGAGAAAGAAGGTGTACCGAAGGCAGAGGCCACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCATTGTCAAGGGGAGGA GCCACCTGAACCATGAAAAGGAGATGTTTGCCCAAGACCATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCTGGTGAAGCCCACAG CCATCATAGGTGTTGCTGCCATCGCAGGAGCCTTCACGGAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCGCCCTATCATCTTTG CCCTGAGCAACCCCACCAGCAAGGCCGAGTGCACGGCTGAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTTTGCCAGTGGAAGTC CTTTTAAGAGTGTGACTCTGGAAGATGGCAAGACCTTCATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGGGGTGGCACTGGGAG TCATCGCCGGCGGGATCCGGCACATCCCAGATGAGATCTTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTCTGAGCAGCATCTGT CCCAGGGGAGACTCTACCCACCACTCAGCACCATCCGAGACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTACGCGTACAAACACA ACCTGGCTTCCTACTACCCAGAGCCTAAGGACAAGGAGGCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGACTCCTTTACACTGG ACAGCTACACTTGGCCCAAGGAAGCCATGAATGTTCAGACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAGATGAAGCCCAGAGT AACACCCACAATATAAATGGGTTCCAAAATGGCCCAAGTGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCTGGTGTGAGAGGAGA >In-frame_ENST00000528398_ENST00000393324_TCGA-VG-A8LO_PICALM_chr11_85707868_-_ME3_chr11_86176242_length(amino acids)=371AA_start in transcript=186_stop in transcript=1301 MNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQV AFDFTKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCK EGLDIYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDE REKQAALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTA -------------------------------------------------------------- >In-frame_ENST00000528398_ENST00000359636_TCGA-VG-A8LO_PICALM_chr11_85707868_-_ME3_chr11_86176242_length(transcript)=2468nt_BP=1291nt TATGTGTTTCCTGTCCTATTCCACACCCTAGAGAATGAATACCGGCCAGCTAGTATCTAAATTTAGAATGGCAGCAACGTGTCGGGTTTT CGGAGTAGAGATAAACAAAACCAGGTGACATTTCCAAGCCTCTCAAGGAAAGGGGGGAAAAAACCTTTCTGGGACTTAATTCAGTGCACA AATGAGATGAATGTGAACATCCCACAGTTGGCAGACAGTTTATTTGAAAGAACTACTAATAGTAGTTGGGTGGTGGTCTTCAAATCTCTC ATTACAACTCATCATTTGATGGTGTATGGAAATGAGCGTTTTATTCAGTATTTGGCTTCAAGAAACACGTTGTTTAACTTAAGCAATTTT TTGGATAAAAGTGGATTGCAAGGATATGACATGTCTACATTTATTAGGCGGTATAGTAGATATTTAAATGAGAAAGCAGTTTCATACAGA CAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGGAGTTATGAGAACAATGAACACAGAAAAACTCCTAAAAACTGTACCA ATTATTCAGAATCAGATGGATGCACTTCTTGATTTTAATGTTAATAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTC CTGTTCAAAGATGCCATTAGACTGTTTGCAGCATACAATGAAGGAATTATTAATTTGTTGGAAAAATATTTTGATATGAAAAAGAACCAA TGCAAAGAAGGTCTTGACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTTGCAGAGCAAGTTGGAATT GACAGAGGTGATATACCAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAA ATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTG GATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAA CCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTTCTACC CCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCA ACTGCTTCTCAGGTAGCAAGTACATGGGGAGGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCGCC TGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGGGATCTTGGCTGCTC TGCGAATCACCAAGAACAAGCTTTCCAATCACGTGTTTGTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGCCCACCTCCTTGTCA TGGCCCTAGAGAAAGAAGGTGTACCGAAGGCAGAGGCCACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCATTGTCAAGGGGAGGA GCCACCTGAACCATGAAAAGGAGATGTTTGCCCAAGACCATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCTGGTGAAGCCCACAG CCATCATAGGTGTTGCTGCCATCGCAGGAGCCTTCACGGAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCGCCCTATCATCTTTG CCCTGAGCAACCCCACCAGCAAGGCCGAGTGCACGGCTGAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTTTGCCAGTGGAAGTC CTTTTAAGAGTGTGACTCTGGAAGATGGCAAGACCTTCATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGGGGTGGCACTGGGAG TCATCGCCGGCGGGATCCGGCACATCCCAGATGAGATCTTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTCTGAGCAGCATCTGT CCCAGGGGAGACTCTACCCACCACTCAGCACCATCCGAGACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTACGCGTACAAACACA ACCTGGCTTCCTACTACCCAGAGCCTAAGGACAAGGAGGCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGACTCCTTTACACTGG ACAGCTACACTTGGCCCAAGGAAGCCATGAATGTTCAGACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAGATGAAGCCCAGAGT AACACCCACAATATAAATGGGTTCCAAAATGGCCCAAGTGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCTGGTGTGAGAGGAGA >In-frame_ENST00000528398_ENST00000359636_TCGA-VG-A8LO_PICALM_chr11_85707868_-_ME3_chr11_86176242_length(amino acids)=371AA_start in transcript=186_stop in transcript=1301 MNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQV AFDFTKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCK EGLDIYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDE REKQAALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTA -------------------------------------------------------------- >In-frame_ENST00000528398_ENST00000543262_TCGA-VG-A8LO_PICALM_chr11_85707868_-_ME3_chr11_86176242_length(transcript)=2466nt_BP=1291nt TATGTGTTTCCTGTCCTATTCCACACCCTAGAGAATGAATACCGGCCAGCTAGTATCTAAATTTAGAATGGCAGCAACGTGTCGGGTTTT CGGAGTAGAGATAAACAAAACCAGGTGACATTTCCAAGCCTCTCAAGGAAAGGGGGGAAAAAACCTTTCTGGGACTTAATTCAGTGCACA AATGAGATGAATGTGAACATCCCACAGTTGGCAGACAGTTTATTTGAAAGAACTACTAATAGTAGTTGGGTGGTGGTCTTCAAATCTCTC ATTACAACTCATCATTTGATGGTGTATGGAAATGAGCGTTTTATTCAGTATTTGGCTTCAAGAAACACGTTGTTTAACTTAAGCAATTTT TTGGATAAAAGTGGATTGCAAGGATATGACATGTCTACATTTATTAGGCGGTATAGTAGATATTTAAATGAGAAAGCAGTTTCATACAGA CAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGGAGTTATGAGAACAATGAACACAGAAAAACTCCTAAAAACTGTACCA ATTATTCAGAATCAGATGGATGCACTTCTTGATTTTAATGTTAATAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTC CTGTTCAAAGATGCCATTAGACTGTTTGCAGCATACAATGAAGGAATTATTAATTTGTTGGAAAAATATTTTGATATGAAAAAGAACCAA TGCAAAGAAGGTCTTGACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTTGCAGAGCAAGTTGGAATT GACAGAGGTGATATACCAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAA ATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTG GATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAA CCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTTCTACC CCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCA ACTGCTTCTCAGGTAGCAAGTACATGGGGAGGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCGCC TGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGGGATCTTGGCTGCTC TGCGAATCACCAAGAACAAGCTTTCCAATCACGTGTTTGTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGCCCACCTCCTTGTCA TGGCCCTAGAGAAAGAAGGTGTACCGAAGGCAGAGGCCACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCATTGTCAAGGGGAGGA GCCACCTGAACCATGAAAAGGAGATGTTTGCCCAAGACCATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCTGGTGAAGCCCACAG CCATCATAGGTGTTGCTGCCATCGCAGGAGCCTTCACGGAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCGCCCTATCATCTTTG CCCTGAGCAACCCCACCAGCAAGGCCGAGTGCACGGCTGAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTTTGCCAGTGGAAGTC CTTTTAAGAGTGTGACTCTGGAAGATGGCAAGACCTTCATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGGGGTGGCACTGGGAG TCATCGCCGGCGGGATCCGGCACATCCCAGATGAGATCTTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTCTGAGCAGCATCTGT CCCAGGGGAGACTCTACCCACCACTCAGCACCATCCGAGACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTACGCGTACAAACACA ACCTGGCTTCCTACTACCCAGAGCCTAAGGACAAGGAGGCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGACTCCTTTACACTGG ACAGCTACACTTGGCCCAAGGAAGCCATGAATGTTCAGACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAGATGAAGCCCAGAGT AACACCCACAATATAAATGGGTTCCAAAATGGCCCAAGTGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCTGGTGTGAGAGGAGA >In-frame_ENST00000528398_ENST00000543262_TCGA-VG-A8LO_PICALM_chr11_85707868_-_ME3_chr11_86176242_length(amino acids)=371AA_start in transcript=186_stop in transcript=1301 MNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQV AFDFTKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCK EGLDIYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDE REKQAALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTA -------------------------------------------------------------- >In-frame_ENST00000528398_ENST00000323418_TCGA-VG-A8LO_PICALM_chr11_85707868_-_ME3_chr11_86176242_length(transcript)=1448nt_BP=1291nt TATGTGTTTCCTGTCCTATTCCACACCCTAGAGAATGAATACCGGCCAGCTAGTATCTAAATTTAGAATGGCAGCAACGTGTCGGGTTTT CGGAGTAGAGATAAACAAAACCAGGTGACATTTCCAAGCCTCTCAAGGAAAGGGGGGAAAAAACCTTTCTGGGACTTAATTCAGTGCACA AATGAGATGAATGTGAACATCCCACAGTTGGCAGACAGTTTATTTGAAAGAACTACTAATAGTAGTTGGGTGGTGGTCTTCAAATCTCTC ATTACAACTCATCATTTGATGGTGTATGGAAATGAGCGTTTTATTCAGTATTTGGCTTCAAGAAACACGTTGTTTAACTTAAGCAATTTT TTGGATAAAAGTGGATTGCAAGGATATGACATGTCTACATTTATTAGGCGGTATAGTAGATATTTAAATGAGAAAGCAGTTTCATACAGA CAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGGAGTTATGAGAACAATGAACACAGAAAAACTCCTAAAAACTGTACCA ATTATTCAGAATCAGATGGATGCACTTCTTGATTTTAATGTTAATAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTC CTGTTCAAAGATGCCATTAGACTGTTTGCAGCATACAATGAAGGAATTATTAATTTGTTGGAAAAATATTTTGATATGAAAAAGAACCAA TGCAAAGAAGGTCTTGACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTTGCAGAGCAAGTTGGAATT GACAGAGGTGATATACCAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAA ATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTG GATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAA CCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTTCTACC CCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCA ACTGCTTCTCAGGTAGCAAGTACATGGGGAGGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCGCC TGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGATGACATCCAAGATGACTTCTCCAGAGGCCCAAAGAGGTCACAACTTTTCT >In-frame_ENST00000528398_ENST00000323418_TCGA-VG-A8LO_PICALM_chr11_85707868_-_ME3_chr11_86176242_length(amino acids)=371AA_start in transcript=186_stop in transcript=1301 MNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQV AFDFTKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCK EGLDIYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDE REKQAALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTA -------------------------------------------------------------- >In-frame_ENST00000528398_ENST00000393324_TCGA-VG-A8LO-01A_PICALM_chr11_85707869_-_ME3_chr11_86176242_length(transcript)=2468nt_BP=1291nt TATGTGTTTCCTGTCCTATTCCACACCCTAGAGAATGAATACCGGCCAGCTAGTATCTAAATTTAGAATGGCAGCAACGTGTCGGGTTTT CGGAGTAGAGATAAACAAAACCAGGTGACATTTCCAAGCCTCTCAAGGAAAGGGGGGAAAAAACCTTTCTGGGACTTAATTCAGTGCACA AATGAGATGAATGTGAACATCCCACAGTTGGCAGACAGTTTATTTGAAAGAACTACTAATAGTAGTTGGGTGGTGGTCTTCAAATCTCTC ATTACAACTCATCATTTGATGGTGTATGGAAATGAGCGTTTTATTCAGTATTTGGCTTCAAGAAACACGTTGTTTAACTTAAGCAATTTT TTGGATAAAAGTGGATTGCAAGGATATGACATGTCTACATTTATTAGGCGGTATAGTAGATATTTAAATGAGAAAGCAGTTTCATACAGA CAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGGAGTTATGAGAACAATGAACACAGAAAAACTCCTAAAAACTGTACCA ATTATTCAGAATCAGATGGATGCACTTCTTGATTTTAATGTTAATAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTC CTGTTCAAAGATGCCATTAGACTGTTTGCAGCATACAATGAAGGAATTATTAATTTGTTGGAAAAATATTTTGATATGAAAAAGAACCAA TGCAAAGAAGGTCTTGACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTTGCAGAGCAAGTTGGAATT GACAGAGGTGATATACCAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAA ATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTG GATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAA CCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTTCTACC CCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCA ACTGCTTCTCAGGTAGCAAGTACATGGGGAGGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCGCC TGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGGGATCTTGGCTGCTC TGCGAATCACCAAGAACAAGCTTTCCAATCACGTGTTTGTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGCCCACCTCCTTGTCA TGGCCCTAGAGAAAGAAGGTGTACCGAAGGCAGAGGCCACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCATTGTCAAGGGGAGGA GCCACCTGAACCATGAAAAGGAGATGTTTGCCCAAGACCATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCTGGTGAAGCCCACAG CCATCATAGGTGTTGCTGCCATCGCAGGAGCCTTCACGGAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCGCCCTATCATCTTTG CCCTGAGCAACCCCACCAGCAAGGCCGAGTGCACGGCTGAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTTTGCCAGTGGAAGTC CTTTTAAGAGTGTGACTCTGGAAGATGGCAAGACCTTCATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGGGGTGGCACTGGGAG TCATCGCCGGCGGGATCCGGCACATCCCAGATGAGATCTTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTCTGAGCAGCATCTGT CCCAGGGGAGACTCTACCCACCACTCAGCACCATCCGAGACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTACGCGTACAAACACA ACCTGGCTTCCTACTACCCAGAGCCTAAGGACAAGGAGGCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGACTCCTTTACACTGG ACAGCTACACTTGGCCCAAGGAAGCCATGAATGTTCAGACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAGATGAAGCCCAGAGT AACACCCACAATATAAATGGGTTCCAAAATGGCCCAAGTGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCTGGTGTGAGAGGAGA >In-frame_ENST00000528398_ENST00000393324_TCGA-VG-A8LO-01A_PICALM_chr11_85707869_-_ME3_chr11_86176242_length(amino acids)=371AA_start in transcript=186_stop in transcript=1301 MNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQV AFDFTKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCK EGLDIYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDE REKQAALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTA -------------------------------------------------------------- >In-frame_ENST00000528398_ENST00000359636_TCGA-VG-A8LO-01A_PICALM_chr11_85707869_-_ME3_chr11_86176242_length(transcript)=2468nt_BP=1291nt TATGTGTTTCCTGTCCTATTCCACACCCTAGAGAATGAATACCGGCCAGCTAGTATCTAAATTTAGAATGGCAGCAACGTGTCGGGTTTT CGGAGTAGAGATAAACAAAACCAGGTGACATTTCCAAGCCTCTCAAGGAAAGGGGGGAAAAAACCTTTCTGGGACTTAATTCAGTGCACA AATGAGATGAATGTGAACATCCCACAGTTGGCAGACAGTTTATTTGAAAGAACTACTAATAGTAGTTGGGTGGTGGTCTTCAAATCTCTC ATTACAACTCATCATTTGATGGTGTATGGAAATGAGCGTTTTATTCAGTATTTGGCTTCAAGAAACACGTTGTTTAACTTAAGCAATTTT TTGGATAAAAGTGGATTGCAAGGATATGACATGTCTACATTTATTAGGCGGTATAGTAGATATTTAAATGAGAAAGCAGTTTCATACAGA CAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGGAGTTATGAGAACAATGAACACAGAAAAACTCCTAAAAACTGTACCA ATTATTCAGAATCAGATGGATGCACTTCTTGATTTTAATGTTAATAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTC CTGTTCAAAGATGCCATTAGACTGTTTGCAGCATACAATGAAGGAATTATTAATTTGTTGGAAAAATATTTTGATATGAAAAAGAACCAA TGCAAAGAAGGTCTTGACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTTGCAGAGCAAGTTGGAATT GACAGAGGTGATATACCAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAA ATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTG GATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAA CCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTTCTACC CCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCA ACTGCTTCTCAGGTAGCAAGTACATGGGGAGGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCGCC TGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGGGATCTTGGCTGCTC TGCGAATCACCAAGAACAAGCTTTCCAATCACGTGTTTGTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGCCCACCTCCTTGTCA TGGCCCTAGAGAAAGAAGGTGTACCGAAGGCAGAGGCCACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCATTGTCAAGGGGAGGA GCCACCTGAACCATGAAAAGGAGATGTTTGCCCAAGACCATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCTGGTGAAGCCCACAG CCATCATAGGTGTTGCTGCCATCGCAGGAGCCTTCACGGAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCGCCCTATCATCTTTG CCCTGAGCAACCCCACCAGCAAGGCCGAGTGCACGGCTGAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTTTGCCAGTGGAAGTC CTTTTAAGAGTGTGACTCTGGAAGATGGCAAGACCTTCATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGGGGTGGCACTGGGAG TCATCGCCGGCGGGATCCGGCACATCCCAGATGAGATCTTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTCTGAGCAGCATCTGT CCCAGGGGAGACTCTACCCACCACTCAGCACCATCCGAGACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTACGCGTACAAACACA ACCTGGCTTCCTACTACCCAGAGCCTAAGGACAAGGAGGCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGACTCCTTTACACTGG ACAGCTACACTTGGCCCAAGGAAGCCATGAATGTTCAGACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAGATGAAGCCCAGAGT AACACCCACAATATAAATGGGTTCCAAAATGGCCCAAGTGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCTGGTGTGAGAGGAGA >In-frame_ENST00000528398_ENST00000359636_TCGA-VG-A8LO-01A_PICALM_chr11_85707869_-_ME3_chr11_86176242_length(amino acids)=371AA_start in transcript=186_stop in transcript=1301 MNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQV AFDFTKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCK EGLDIYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDE REKQAALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTA -------------------------------------------------------------- >In-frame_ENST00000528398_ENST00000543262_TCGA-VG-A8LO-01A_PICALM_chr11_85707869_-_ME3_chr11_86176242_length(transcript)=2466nt_BP=1291nt TATGTGTTTCCTGTCCTATTCCACACCCTAGAGAATGAATACCGGCCAGCTAGTATCTAAATTTAGAATGGCAGCAACGTGTCGGGTTTT CGGAGTAGAGATAAACAAAACCAGGTGACATTTCCAAGCCTCTCAAGGAAAGGGGGGAAAAAACCTTTCTGGGACTTAATTCAGTGCACA AATGAGATGAATGTGAACATCCCACAGTTGGCAGACAGTTTATTTGAAAGAACTACTAATAGTAGTTGGGTGGTGGTCTTCAAATCTCTC ATTACAACTCATCATTTGATGGTGTATGGAAATGAGCGTTTTATTCAGTATTTGGCTTCAAGAAACACGTTGTTTAACTTAAGCAATTTT TTGGATAAAAGTGGATTGCAAGGATATGACATGTCTACATTTATTAGGCGGTATAGTAGATATTTAAATGAGAAAGCAGTTTCATACAGA CAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGGAGTTATGAGAACAATGAACACAGAAAAACTCCTAAAAACTGTACCA ATTATTCAGAATCAGATGGATGCACTTCTTGATTTTAATGTTAATAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTC CTGTTCAAAGATGCCATTAGACTGTTTGCAGCATACAATGAAGGAATTATTAATTTGTTGGAAAAATATTTTGATATGAAAAAGAACCAA TGCAAAGAAGGTCTTGACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTTGCAGAGCAAGTTGGAATT GACAGAGGTGATATACCAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAA ATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTG GATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAA CCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTTCTACC CCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCA ACTGCTTCTCAGGTAGCAAGTACATGGGGAGGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCGCC TGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGATGACATCCAAGGCACAGCCTCCGTTGCTGTGGCAGGGATCTTGGCTGCTC TGCGAATCACCAAGAACAAGCTTTCCAATCACGTGTTTGTTTTCCAAGGTGCAGGCGAGGCAGCTATGGGCATTGCCCACCTCCTTGTCA TGGCCCTAGAGAAAGAAGGTGTACCGAAGGCAGAGGCCACAAGAAAGATCTGGATGGTGGACTCTAAAGGGCTCATTGTCAAGGGGAGGA GCCACCTGAACCATGAAAAGGAGATGTTTGCCCAAGACCATCCTGAAGTCAACTCCCTGGAGGAGGTGGTGAGGCTGGTGAAGCCCACAG CCATCATAGGTGTTGCTGCCATCGCAGGAGCCTTCACGGAGCAGATTCTGAGGGACATGGCCTCCTTCCACGAGCGCCCTATCATCTTTG CCCTGAGCAACCCCACCAGCAAGGCCGAGTGCACGGCTGAGAAGTGCTACCGGGTCACCGAGGGCCGAGGGATTTTTGCCAGTGGAAGTC CTTTTAAGAGTGTGACTCTGGAAGATGGCAAGACCTTCATTCCTGGGCAGGGAAACAATGCTTACGTGTTCCCCGGGGTGGCACTGGGAG TCATCGCCGGCGGGATCCGGCACATCCCAGATGAGATCTTCCTCCTGACAGCAGAGCAAATTGCCCAGGAAGTCTCTGAGCAGCATCTGT CCCAGGGGAGACTCTACCCACCACTCAGCACCATCCGAGACGTGTCTTTGAGAATTGCCATCAAAGTTCTCGACTACGCGTACAAACACA ACCTGGCTTCCTACTACCCAGAGCCTAAGGACAAGGAGGCTTTTGTAAGATCCCTGGTCTACACTCCAGACTATGACTCCTTTACACTGG ACAGCTACACTTGGCCCAAGGAAGCCATGAATGTTCAGACGGTCTGAGGCAGTCTCAGAGGCTAGTATGGGGCTAGATGAAGCCCAGAGT AACACCCACAATATAAATGGGTTCCAAAATGGCCCAAGTGAATCCTTGTCGCTGTGTTTTTTCTTTTAAACTTTCTGGTGTGAGAGGAGA >In-frame_ENST00000528398_ENST00000543262_TCGA-VG-A8LO-01A_PICALM_chr11_85707869_-_ME3_chr11_86176242_length(amino acids)=371AA_start in transcript=186_stop in transcript=1301 MNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQV AFDFTKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCK EGLDIYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDE REKQAALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTA -------------------------------------------------------------- >In-frame_ENST00000528398_ENST00000323418_TCGA-VG-A8LO-01A_PICALM_chr11_85707869_-_ME3_chr11_86176242_length(transcript)=1448nt_BP=1291nt TATGTGTTTCCTGTCCTATTCCACACCCTAGAGAATGAATACCGGCCAGCTAGTATCTAAATTTAGAATGGCAGCAACGTGTCGGGTTTT CGGAGTAGAGATAAACAAAACCAGGTGACATTTCCAAGCCTCTCAAGGAAAGGGGGGAAAAAACCTTTCTGGGACTTAATTCAGTGCACA AATGAGATGAATGTGAACATCCCACAGTTGGCAGACAGTTTATTTGAAAGAACTACTAATAGTAGTTGGGTGGTGGTCTTCAAATCTCTC ATTACAACTCATCATTTGATGGTGTATGGAAATGAGCGTTTTATTCAGTATTTGGCTTCAAGAAACACGTTGTTTAACTTAAGCAATTTT TTGGATAAAAGTGGATTGCAAGGATATGACATGTCTACATTTATTAGGCGGTATAGTAGATATTTAAATGAGAAAGCAGTTTCATACAGA CAAGTTGCATTTGATTTCACAAAAGTGAAGAGAGGGGCTGATGGAGTTATGAGAACAATGAACACAGAAAAACTCCTAAAAACTGTACCA ATTATTCAGAATCAGATGGATGCACTTCTTGATTTTAATGTTAATAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTC CTGTTCAAAGATGCCATTAGACTGTTTGCAGCATACAATGAAGGAATTATTAATTTGTTGGAAAAATATTTTGATATGAAAAAGAACCAA TGCAAAGAAGGTCTTGACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTTGCAGAGCAAGTTGGAATT GACAGAGGTGATATACCAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAA ATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTG GATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAA CCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTTCTACC CCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCA ACTGCTTCTCAGGTAGCAAGTACATGGGGAGGTTTGGAATAAATTGCCTCATCCAATTTGAAGACTTCGCCAATGCCAATGCCTTCCGCC TGCTCAACAAATACCGTAACAAGTACTGCATGTTCAATGATGACATCCAAGATGACTTCTCCAGAGGCCCAAAGAGGTCACAACTTTTCT >In-frame_ENST00000528398_ENST00000323418_TCGA-VG-A8LO-01A_PICALM_chr11_85707869_-_ME3_chr11_86176242_length(amino acids)=371AA_start in transcript=186_stop in transcript=1301 MNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQV AFDFTKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCK EGLDIYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDE REKQAALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTA -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for PICALM-ME3 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Hgene | PICALM | chr11:85707868 | chr11:86176242 | ENST00000356360 | - | 12 | 19 | 221_294 | 419.3333333333333 | 633.0 | PIMREG |
Hgene | PICALM | chr11:85707868 | chr11:86176242 | ENST00000393346 | - | 12 | 20 | 221_294 | 419.3333333333333 | 653.0 | PIMREG |
Hgene | PICALM | chr11:85707868 | chr11:86176242 | ENST00000526033 | - | 12 | 20 | 221_294 | 419.3333333333333 | 646.0 | PIMREG |
Hgene | PICALM | chr11:85707868 | chr11:86176242 | ENST00000528398 | - | 12 | 19 | 221_294 | 368.3333333333333 | 552.0 | PIMREG |
Hgene | PICALM | chr11:85707868 | chr11:86176242 | ENST00000532317 | - | 12 | 20 | 221_294 | 419.3333333333333 | 611.0 | PIMREG |
Hgene | PICALM | chr11:85707869 | chr11:86176242 | ENST00000356360 | - | 12 | 19 | 221_294 | 419.3333333333333 | 633.0 | PIMREG |
Hgene | PICALM | chr11:85707869 | chr11:86176242 | ENST00000393346 | - | 12 | 20 | 221_294 | 419.3333333333333 | 653.0 | PIMREG |
Hgene | PICALM | chr11:85707869 | chr11:86176242 | ENST00000526033 | - | 12 | 20 | 221_294 | 419.3333333333333 | 646.0 | PIMREG |
Hgene | PICALM | chr11:85707869 | chr11:86176242 | ENST00000528398 | - | 12 | 19 | 221_294 | 368.3333333333333 | 552.0 | PIMREG |
Hgene | PICALM | chr11:85707869 | chr11:86176242 | ENST00000532317 | - | 12 | 20 | 221_294 | 419.3333333333333 | 611.0 | PIMREG |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | PICALM | chr11:85779693 | chr11:86270865 | ENST00000356360 | - | 1 | 19 | 221_294 | 43.333333333333336 | 633.0 | PIMREG |
Hgene | PICALM | chr11:85779693 | chr11:86270865 | ENST00000393346 | - | 1 | 20 | 221_294 | 43.333333333333336 | 653.0 | PIMREG |
Hgene | PICALM | chr11:85779693 | chr11:86270865 | ENST00000526033 | - | 1 | 20 | 221_294 | 43.333333333333336 | 646.0 | PIMREG |
Hgene | PICALM | chr11:85779693 | chr11:86270865 | ENST00000528398 | - | 1 | 19 | 221_294 | 0 | 552.0 | PIMREG |
Hgene | PICALM | chr11:85779693 | chr11:86270865 | ENST00000532317 | - | 1 | 20 | 221_294 | 43.333333333333336 | 611.0 | PIMREG |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for PICALM-ME3 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Tgene | ME3 | Q16798 | DB00157 | NADH | Small molecule | Approved|Nutraceutical |
Top |
Related Diseases for PICALM-ME3 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | PICALM | C0002395 | Alzheimer's Disease | 2 | CTD_human |
Hgene | PICALM | C0011265 | Presenile dementia | 2 | CTD_human |
Hgene | PICALM | C0276496 | Familial Alzheimer Disease (FAD) | 2 | CTD_human |
Hgene | PICALM | C0494463 | Alzheimer Disease, Late Onset | 2 | CTD_human |
Hgene | PICALM | C0546126 | Acute Confusional Senile Dementia | 2 | CTD_human |
Hgene | PICALM | C0750900 | Alzheimer's Disease, Focal Onset | 2 | CTD_human |
Hgene | PICALM | C0750901 | Alzheimer Disease, Early Onset | 2 | CTD_human |
Hgene | PICALM | C0234985 | Mental deterioration | 1 | CTD_human |
Hgene | PICALM | C0338656 | Impaired cognition | 1 | CTD_human |
Hgene | PICALM | C1270972 | Mild cognitive disorder | 1 | CTD_human |