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 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:ARID1B-PREP (FusionGDB2 ID:6511) |
Fusion Gene Summary for ARID1B-PREP |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: ARID1B-PREP | Fusion gene ID: 6511 | Hgene | Tgene | Gene symbol | ARID1B | PREP | Gene ID | 57492 | 5550 |
| Gene name | AT-rich interaction domain 1B | prolyl endopeptidase | |
| Synonyms | 6A3-5|BAF250B|BRIGHT|CSS1|DAN15|ELD/OSA1|MRD12|OSA2|P250R | PE|PEP | |
| Cytomap | 6q25.3 | 6q21 | |
| Type of gene | protein-coding | protein-coding | |
| Description | AT-rich interactive domain-containing protein 1BARID domain-containing protein 1BAT rich interactive domain 1B (SWI1-like)BRG1-associated factor 250bBRG1-binding protein ELD/OSA1ELD (eyelid)/OSA protein | prolyl endopeptidasedJ355L5.1 (prolyl endopeptidase)post-proline cleaving enzymeprolyl oligopeptidase | |
| Modification date | 20200320 | 20200313 | |
| UniProtAcc | Q8NFD5 | PNOC | |
| Ensembl transtripts involved in fusion gene | ENST00000350026, ENST00000346085, ENST00000367148, ENST00000275248, ENST00000478761, | ENST00000369110, | |
| Fusion gene scores | * DoF score | 27 X 18 X 14=6804 | 8 X 4 X 8=256 |
| # samples | 31 | 9 | |
| ** MAII score | log2(31/6804*10)=-4.45604302038915 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(9/256*10)=-1.50814690367033 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: ARID1B [Title/Abstract] AND PREP [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | ARID1B(157150555)-PREP(105845802), # samples:4 | ||
| Anticipated loss of major functional domain due to fusion event. | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene breakpoints across ARID1B (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene breakpoints across PREP (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | LGG | TCGA-E1-5304-01A | ARID1B | chr6 | 157150555 | + | PREP | chr6 | 105845802 | - |
| ChimerDB4 | LGG | TCGA-E1-5304 | ARID1B | chr6 | 157150555 | + | PREP | chr6 | 105845802 | - |
| ChimerDB4 | LGG | TCGA-E1-5304 | ARID1B | chr6 | 157150555 | + | PREP | chr6 | 105845802 | - |
| ChimerDB4 | LGG | TCGA-E1-5304-01A | ARID1B | chr6 | 157150555 | - | PREP | chr6 | 105845802 | - |
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Fusion Gene ORF analysis for ARID1B-PREP |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000350026 | ENST00000369110 | ARID1B | chr6 | 157150555 | + | PREP | chr6 | 105845802 | - |
| In-frame | ENST00000346085 | ENST00000369110 | ARID1B | chr6 | 157150555 | + | PREP | chr6 | 105845802 | - |
| In-frame | ENST00000367148 | ENST00000369110 | ARID1B | chr6 | 157150555 | + | PREP | chr6 | 105845802 | - |
| In-frame | ENST00000275248 | ENST00000369110 | ARID1B | chr6 | 157150555 | + | PREP | chr6 | 105845802 | - |
| intron-3CDS | ENST00000478761 | ENST00000369110 | ARID1B | chr6 | 157150555 | + | PREP | chr6 | 105845802 | - |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000350026 | ARID1B | chr6 | 157150555 | + | ENST00000369110 | PREP | chr6 | 105845802 | - | 4405 | 1738 | 1 | 3825 | 1274 |
| ENST00000346085 | ARID1B | chr6 | 157150555 | + | ENST00000369110 | PREP | chr6 | 105845802 | - | 4405 | 1738 | 1 | 3825 | 1274 |
| ENST00000367148 | ARID1B | chr6 | 157150555 | + | ENST00000369110 | PREP | chr6 | 105845802 | - | 4404 | 1737 | 0 | 3824 | 1274 |
| ENST00000275248 | ARID1B | chr6 | 157150555 | + | ENST00000369110 | PREP | chr6 | 105845802 | - | 4382 | 1715 | 77 | 3802 | 1241 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000350026 | ENST00000369110 | ARID1B | chr6 | 157150555 | + | PREP | chr6 | 105845802 | - | 0.001489583 | 0.9985104 |
| ENST00000346085 | ENST00000369110 | ARID1B | chr6 | 157150555 | + | PREP | chr6 | 105845802 | - | 0.001489583 | 0.9985104 |
| ENST00000367148 | ENST00000369110 | ARID1B | chr6 | 157150555 | + | PREP | chr6 | 105845802 | - | 0.00148608 | 0.9985139 |
| ENST00000275248 | ENST00000369110 | ARID1B | chr6 | 157150555 | + | PREP | chr6 | 105845802 | - | 0.001705857 | 0.9982942 |
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Fusion Genomic Features for ARID1B-PREP |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for ARID1B-PREP |
| Go to FGviewer for the breakpoints of chr6:157150555-chr6:105845802 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| ARID1B | PREP |
| FUNCTION: Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Component of SWI/SNF chromatin remodeling complexes that carry out key enzymatic activities, changing chromatin structure by altering DNA-histone contacts within a nucleosome in an ATP-dependent manner. Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and the neuron-specific chromatin remodeling complex (nBAF complex). During neural development a switch from a stem/progenitor to a postmitotic chromatin remodeling mechanism occurs as neurons exit the cell cycle and become committed to their adult state. The transition from proliferating neural stem/progenitor cells to postmitotic neurons requires a switch in subunit composition of the npBAF and nBAF complexes. As neural progenitors exit mitosis and differentiate into neurons, npBAF complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth (By similarity). Binds DNA non-specifically (PubMed:14982958, PubMed:15170388). {ECO:0000250|UniProtKB:E9Q4N7, ECO:0000269|PubMed:14982958, ECO:0000269|PubMed:15170388, ECO:0000303|PubMed:12672490, ECO:0000303|PubMed:22952240, ECO:0000303|PubMed:26601204}. | 176 |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 107_131 | 579.0 | 2250.0 | Compositional bias | Note=Gln-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 114_131 | 579.0 | 2250.0 | Compositional bias | Note=Poly-Gln |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 141_401 | 579.0 | 2250.0 | Compositional bias | Note=Gly-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 2_47 | 579.0 | 2250.0 | Compositional bias | Note=Ala-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 329_493 | 579.0 | 2250.0 | Compositional bias | Note=Ala-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 35_57 | 579.0 | 2250.0 | Compositional bias | Note=Ser-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 81_104 | 579.0 | 2250.0 | Compositional bias | Note=His-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 107_131 | 579.0 | 2237.0 | Compositional bias | Note=Gln-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 114_131 | 579.0 | 2237.0 | Compositional bias | Note=Poly-Gln |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 141_401 | 579.0 | 2237.0 | Compositional bias | Note=Gly-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 2_47 | 579.0 | 2237.0 | Compositional bias | Note=Ala-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 329_493 | 579.0 | 2237.0 | Compositional bias | Note=Ala-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 35_57 | 579.0 | 2237.0 | Compositional bias | Note=Ser-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 81_104 | 579.0 | 2237.0 | Compositional bias | Note=His-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 107_131 | 579.0 | 2290.0 | Compositional bias | Note=Gln-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 114_131 | 579.0 | 2290.0 | Compositional bias | Note=Poly-Gln |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 141_401 | 579.0 | 2290.0 | Compositional bias | Note=Gly-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 2_47 | 579.0 | 2290.0 | Compositional bias | Note=Ala-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 329_493 | 579.0 | 2290.0 | Compositional bias | Note=Ala-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 35_57 | 579.0 | 2290.0 | Compositional bias | Note=Ser-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 81_104 | 579.0 | 2290.0 | Compositional bias | Note=His-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 419_423 | 579.0 | 2250.0 | Motif | Note=LXXLL |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 419_423 | 579.0 | 2237.0 | Motif | Note=LXXLL |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 419_423 | 579.0 | 2290.0 | Motif | Note=LXXLL |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 1034_1037 | 579.0 | 2250.0 | Compositional bias | Note=Poly-Ser |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 1441_1444 | 579.0 | 2250.0 | Compositional bias | Note=Poly-Ser |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 1459_1597 | 579.0 | 2250.0 | Compositional bias | Note=Pro-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 1833_1836 | 579.0 | 2250.0 | Compositional bias | Note=Poly-Pro |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 574_633 | 579.0 | 2250.0 | Compositional bias | Note=Gln-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 684_771 | 579.0 | 2250.0 | Compositional bias | Note=Ser-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 932_935 | 579.0 | 2250.0 | Compositional bias | Note=Poly-Ala |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 1034_1037 | 579.0 | 2237.0 | Compositional bias | Note=Poly-Ser |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 1441_1444 | 579.0 | 2237.0 | Compositional bias | Note=Poly-Ser |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 1459_1597 | 579.0 | 2237.0 | Compositional bias | Note=Pro-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 1833_1836 | 579.0 | 2237.0 | Compositional bias | Note=Poly-Pro |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 574_633 | 579.0 | 2237.0 | Compositional bias | Note=Gln-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 684_771 | 579.0 | 2237.0 | Compositional bias | Note=Ser-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 932_935 | 579.0 | 2237.0 | Compositional bias | Note=Poly-Ala |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 1034_1037 | 579.0 | 2290.0 | Compositional bias | Note=Poly-Ser |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 1441_1444 | 579.0 | 2290.0 | Compositional bias | Note=Poly-Ser |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 1459_1597 | 579.0 | 2290.0 | Compositional bias | Note=Pro-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 1833_1836 | 579.0 | 2290.0 | Compositional bias | Note=Poly-Pro |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 574_633 | 579.0 | 2290.0 | Compositional bias | Note=Gln-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 684_771 | 579.0 | 2290.0 | Compositional bias | Note=Ser-rich |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 932_935 | 579.0 | 2290.0 | Compositional bias | Note=Poly-Ala |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 1053_1144 | 579.0 | 2250.0 | Domain | ARID |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 1053_1144 | 579.0 | 2237.0 | Domain | ARID |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 1053_1144 | 579.0 | 2290.0 | Domain | ARID |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 1358_1377 | 579.0 | 2250.0 | Motif | Nuclear localization signal |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000346085 | + | 2 | 20 | 2036_2040 | 579.0 | 2250.0 | Motif | Note=LXXLL |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 1358_1377 | 579.0 | 2237.0 | Motif | Nuclear localization signal |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000350026 | + | 2 | 19 | 2036_2040 | 579.0 | 2237.0 | Motif | Note=LXXLL |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 1358_1377 | 579.0 | 2290.0 | Motif | Nuclear localization signal |
| Hgene | ARID1B | chr6:157150555 | chr6:105845802 | ENST00000367148 | + | 2 | 20 | 2036_2040 | 579.0 | 2290.0 | Motif | Note=LXXLL |
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Fusion Gene Sequence for ARID1B-PREP |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >In-frame_ENST00000350026_ENST00000369110_TCGA-E1-5304-01A_ARID1B_chr6_157150555_+_PREP_chr6_105845802_length(transcript)=4405nt_BP=1738nt CATGGCCCATAACGCGGGCGCCGCGGCCGCCGCCGGCACCCACAGCGCCAAGAGCGGCGGCTCCGAGGCGGCTCTCAAGGAGGGTGGAAG CGCCGCCGCGCTGTCCTCCTCCTCCTCCTCCTCCGCGGCGGCAGCGGCGGCATCCTCTTCCTCCTCGTCGGGCCCGGGCTCGGCCATGGA GACGGGGCTGCTCCCCAACCACAAACTGAAAACCGTTGGCGAAGCCCCCGCCGCGCCGCCCCACCAGCAGCACCACCACCACCACCATGC CCACCACCACCACCACCATGCCCACCACCTCCACCACCACCACGCACTACAGCAGCAGCTAAACCAGTTCCAGCAGCAGCAGCAGCAGCA GCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAACATCCCATTTCCAACAACAACAGCTTGGGCGGCGCGGGCGGCGGCGCGCCTCAGCC CGGCCCCGACATGGAGCAGCCGCAACATGGAGGCGCCAAGGACAGTGCTGCGGGCGGCCAGGCCGACCCCCCGGGCCCGCCGCTGCTGAG CAAGCCGGGCGACGAGGACGACGCGCCGCCCAAGATGGGGGAGCCGGCGGGCGGCCGCTACGAGCACCCGGGCTTGGGCGCCCTGGGCAC GCAGCAGCCGCCGGTCGCCGTGCCCGGGGGCGGCGGCGGCCCGGCGGCCGTCCCGGAGTTTAATAATTACTATGGCAGCGCTGCCCCTGC GAGCGGCGGCCCCGGCGGCCGCGCTGGGCCTTGCTTTGATCAACATGGCGGACAACAAAGCCCCGGGATGGGGATGATGCACTCCGCCTC CGCCGCCGCCGCCGGGGCCCCCGGCAGCATGGACCCCCTGCAGAACTCCCACGAAGGGTACCCCAACAGCCAGTGCAACCATTATCCGGG CTACAGCCGGCCCGGCGCGGGCGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGCAGCGGAGGAGGAGGAGGAGGAGGAGGAGCAGG AGCAGGAGGAGCAGGAGCGGGAGCTGTGGCGGCGGCGGCCGCGGCGGCGGCGGCAGCAGCAGGAGGCGGCGGCGGCGGCGGCTATGGGGG CTCGTCCGCGGGGTACGGGGTGCTGAGCTCCCCCCGGCAGCAGGGCGGCGGCATGATGATGGGCCCCGGGGGCGGCGGGGCCGCGAGCCT CAGCAAGGCGGCCGCCGGCTCGGCGGCGGGGGGCTTCCAGCGCTTCGCCGGCCAGAACCAGCACCCGTCGGGGGCCACCCCGACCCTCAA TCAGCTGCTCACCTCGCCCAGCCCCATGATGCGGAGCTACGGCGGCAGCTACCCCGAGTACAGCAGCCCCAGCGCGCCGCCGCCGCCGCC GTCGCAGCCCCAGTCCCAGGCGGCGGCGGCGGGGGCGGCGGCGGGCGGCCAGCAGGCGGCCGCGGGCATGGGCTTGGGCAAGGACATGGG CGCCCAGTACGCCGCTGCCAGCCCGGCCTGGGCGGCCGCGCAACAAAGGAGTCACCCGGCGATGAGCCCCGGCACCCCCGGACCGACCAT GGGCAGATCCCAGGGCAGCCCAATGGATCCAATGGTGATGAAGAGACCTCAGTTGTATGGCATGGGCAGTAACCCTCATTCTCAGCCTCA GCAGAGCAGTCCGTACCCAGGAGGTTCCTATGGCCCTCCAGGCCCACAGCGGTATCCAATTGGCATCCAGGGTCGGACTCCCGGGGCCAT GGCCGGAATGCAGTACCCTCAGCAGCAGGTACAGGATTATCATGGTCATAAAATTTGTGACCCTTACGCCTGGCTTGAAGACCCCGACAG TGAACAGACTAAGGCCTTTGTGGAGGCCCAGAATAAGATTACTGTGCCATTTCTTGAGCAGTGTCCCATCAGAGGTTTATACAAAGAGAG AATGACTGAACTATATGATTATCCCAAGTATAGTTGCCACTTCAAGAAAGGAAAACGGTATTTTTATTTTTACAATACAGGTTTGCAGAA CCAGCGAGTATTATATGTACAGGATTCCTTAGAGGGTGAGGCCAGAGTGTTCCTGGACCCCAACATACTGTCTGACGATGGCACAGTGGC ACTCCGAGGTTATGCGTTCAGCGAAGATGGTGAATATTTTGCCTATGGTCTGAGTGCCAGTGGCTCAGACTGGGTGACAATCAAGTTCAT GAAAGTTGATGGTGCCAAAGAGCTTCCAGATGTGCTTGAAAGAGTCAAGTTCAGCTGTATGGCCTGGACCCATGATGGGAAGGGAATGTT CTACAACTCATACCCTCAACAGGATGGAAAAAGTGATGGCACAGAGACATCTACCAATCTCCACCAAAAGCTCTACTACCATGTCTTGGG AACCGATCAGTCAGAAGATATTTTGTGTGCTGAGTTTCCTGATGAACCTAAATGGATGGGTGGAGCTGAGTTATCTGATGATGGCCGCTA TGTCTTGTTATCAATAAGGGAAGGATGTGATCCAGTAAACCGACTCTGGTACTGTGACCTACAGCAGGAATCCAGTGGCATCGCGGGAAT CCTGAAGTGGGTAAAACTGATTGACAACTTTGAAGGGGAATATGACTACGTGACCAATGAGGGGACGGTGTTCACATTCAAGACGAATCG CCAGTCTCCCAACTATCGCGTGATCAACATTGACTTCAGGGATCCTGAAGAGTCTAAGTGGAAAGTACTTGTTCCTGAGCATGAGAAAGA TGTCTTAGAATGGATAGCTTGTGTCAGGTCCAACTTCTTGGTCTTATGCTACCTCCATGACGTCAAGAACATTCTGCAGCTCCATGACCT GACTACTGGTGCTCTCCTTAAGACCTTCCCGCTCGATGTCGGCAGCATTGTAGGGTACAGCGGTCAGAAGAAGGACACTGAAATCTTCTA TCAGTTTACTTCCTTTTTATCTCCAGGTATCATTTATCACTGTGATCTTACCAAAGAGGAGCTGGAGCCAAGAGTTTTCCGAGAGGTGAC CGTAAAAGGAATTGATGCTTCTGATTACCAGACAGTCCAGATTTTCTACCCTAGCAAGGATGGTACGAAGATTCCAATGTTCATTGTGCA TAAAAAAGGCATAAAATTGGATGGCTCTCATCCAGCTTTCTTATATGGCTATGGCGGCTTCAACATATCCATCACACCCAACTACAGTGT TTCCAGGCTTATTTTTGTGAGACACATGGGTGGTATCCTGGCAGTGGCCAACATCAGAGGAGGTGGCGAATATGGAGAGACGTGGCATAA AGGTGGTATCTTGGCCAACAAACAAAACTGCTTTGATGACTTTCAGTGTGCTGCTGAGTATCTGATCAAGGAAGGTTACACATCTCCCAA GAGGCTGACTATTAATGGAGGTTCAAATGGAGGCCTCTTAGTGGCTGCTTGTGCAAATCAGAGACCTGACCTCTTTGGTTGTGTTATTGC CCAAGTTGGAGTAATGGACATGCTGAAGTTTCATAAATATACCATCGGCCATGCTTGGACCACTGATTATGGGTGCTCGGACAGCAAACA ACACTTTGAATGGCTTGTCAAATACTCTCCATTGCATAATGTGAAGTTACCAGAAGCAGATGACATCCAGTACCCGTCCATGCTGCTCCT CACTGCTGACCATGATGACCGCGTGGTCCCGCTTCACTCCCTGAAGTTCATTGCCACCCTTCAGTACATCGTGGGCCGCAGCAGGAAGCA AAGCAACCCCCTGCTTATCCACGTGGACACCAAGGCGGGCCACGGGGCGGGGAAGCCCACAGCCAAAGTGATAGAGGAAGTCTCAGACAT GTTTGCGTTCATCGCGCGGTGCCTGAACGTCGACTGGATTCCATAAACAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGG GCTTTCCCACGTTGACACCAAGAAACCACTGGGCATAATGCTTCCCCACGGGAACATTATTCCTGCACTCACAGGCTACAGTTGAACAGA ACTGCCGTGGGAATTTTATCTTTTTTAGGCTTCTCCTTTTTAGCAAGGCCTTGGTGTTTCTTTTTCCACCCTGTCTAGGCACATGTGGTT TTTTGGTGTTTTTTTTAAGGGCATGTTGGGATAAATAGCTAAATGGCAACAAACACATTGTGAATATTAGATTGCTGAATTAAGGATCAT AGTCGGGCATACTTATCTATATCCATAACCTCTATATCTTTAAATAAATGTGAGAACTGTTCTCATGGAGAAGACTTCTTTGCAACAATA ATAAATGTTATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAA >In-frame_ENST00000350026_ENST00000369110_TCGA-E1-5304-01A_ARID1B_chr6_157150555_+_PREP_chr6_105845802_length(amino acids)=1274AA_start in transcript=1_stop in transcript=3825 MAHNAGAAAAAGTHSAKSGGSEAALKEGGSAAALSSSSSSSAAAAAASSSSSSGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHA HHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS KPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSAS AAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGG SSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPP SQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQ QSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQVQDYHGHKICDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKER MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFM KVDGAKELPDVLERVKFSCMAWTHDGKGMFYNSYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRY VLLSIREGCDPVNRLWYCDLQQESSGIAGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRQSPNYRVINIDFRDPEESKWKVLVPEHEKD VLEWIACVRSNFLVLCYLHDVKNILQLHDLTTGALLKTFPLDVGSIVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVT VKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGILAVANIRGGGEYGETWHK GGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQ HFEWLVKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQSNPLLIHVDTKAGHGAGKPTAKVIEEVSDM -------------------------------------------------------------- >In-frame_ENST00000346085_ENST00000369110_TCGA-E1-5304-01A_ARID1B_chr6_157150555_+_PREP_chr6_105845802_length(transcript)=4405nt_BP=1738nt CATGGCCCATAACGCGGGCGCCGCGGCCGCCGCCGGCACCCACAGCGCCAAGAGCGGCGGCTCCGAGGCGGCTCTCAAGGAGGGTGGAAG CGCCGCCGCGCTGTCCTCCTCCTCCTCCTCCTCCGCGGCGGCAGCGGCGGCATCCTCTTCCTCCTCGTCGGGCCCGGGCTCGGCCATGGA GACGGGGCTGCTCCCCAACCACAAACTGAAAACCGTTGGCGAAGCCCCCGCCGCGCCGCCCCACCAGCAGCACCACCACCACCACCATGC CCACCACCACCACCACCATGCCCACCACCTCCACCACCACCACGCACTACAGCAGCAGCTAAACCAGTTCCAGCAGCAGCAGCAGCAGCA GCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAACATCCCATTTCCAACAACAACAGCTTGGGCGGCGCGGGCGGCGGCGCGCCTCAGCC CGGCCCCGACATGGAGCAGCCGCAACATGGAGGCGCCAAGGACAGTGCTGCGGGCGGCCAGGCCGACCCCCCGGGCCCGCCGCTGCTGAG CAAGCCGGGCGACGAGGACGACGCGCCGCCCAAGATGGGGGAGCCGGCGGGCGGCCGCTACGAGCACCCGGGCTTGGGCGCCCTGGGCAC GCAGCAGCCGCCGGTCGCCGTGCCCGGGGGCGGCGGCGGCCCGGCGGCCGTCCCGGAGTTTAATAATTACTATGGCAGCGCTGCCCCTGC GAGCGGCGGCCCCGGCGGCCGCGCTGGGCCTTGCTTTGATCAACATGGCGGACAACAAAGCCCCGGGATGGGGATGATGCACTCCGCCTC CGCCGCCGCCGCCGGGGCCCCCGGCAGCATGGACCCCCTGCAGAACTCCCACGAAGGGTACCCCAACAGCCAGTGCAACCATTATCCGGG CTACAGCCGGCCCGGCGCGGGCGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGCAGCGGAGGAGGAGGAGGAGGAGGAGGAGCAGG AGCAGGAGGAGCAGGAGCGGGAGCTGTGGCGGCGGCGGCCGCGGCGGCGGCGGCAGCAGCAGGAGGCGGCGGCGGCGGCGGCTATGGGGG CTCGTCCGCGGGGTACGGGGTGCTGAGCTCCCCCCGGCAGCAGGGCGGCGGCATGATGATGGGCCCCGGGGGCGGCGGGGCCGCGAGCCT CAGCAAGGCGGCCGCCGGCTCGGCGGCGGGGGGCTTCCAGCGCTTCGCCGGCCAGAACCAGCACCCGTCGGGGGCCACCCCGACCCTCAA TCAGCTGCTCACCTCGCCCAGCCCCATGATGCGGAGCTACGGCGGCAGCTACCCCGAGTACAGCAGCCCCAGCGCGCCGCCGCCGCCGCC GTCGCAGCCCCAGTCCCAGGCGGCGGCGGCGGGGGCGGCGGCGGGCGGCCAGCAGGCGGCCGCGGGCATGGGCTTGGGCAAGGACATGGG CGCCCAGTACGCCGCTGCCAGCCCGGCCTGGGCGGCCGCGCAACAAAGGAGTCACCCGGCGATGAGCCCCGGCACCCCCGGACCGACCAT GGGCAGATCCCAGGGCAGCCCAATGGATCCAATGGTGATGAAGAGACCTCAGTTGTATGGCATGGGCAGTAACCCTCATTCTCAGCCTCA GCAGAGCAGTCCGTACCCAGGAGGTTCCTATGGCCCTCCAGGCCCACAGCGGTATCCAATTGGCATCCAGGGTCGGACTCCCGGGGCCAT GGCCGGAATGCAGTACCCTCAGCAGCAGGTACAGGATTATCATGGTCATAAAATTTGTGACCCTTACGCCTGGCTTGAAGACCCCGACAG TGAACAGACTAAGGCCTTTGTGGAGGCCCAGAATAAGATTACTGTGCCATTTCTTGAGCAGTGTCCCATCAGAGGTTTATACAAAGAGAG AATGACTGAACTATATGATTATCCCAAGTATAGTTGCCACTTCAAGAAAGGAAAACGGTATTTTTATTTTTACAATACAGGTTTGCAGAA CCAGCGAGTATTATATGTACAGGATTCCTTAGAGGGTGAGGCCAGAGTGTTCCTGGACCCCAACATACTGTCTGACGATGGCACAGTGGC ACTCCGAGGTTATGCGTTCAGCGAAGATGGTGAATATTTTGCCTATGGTCTGAGTGCCAGTGGCTCAGACTGGGTGACAATCAAGTTCAT GAAAGTTGATGGTGCCAAAGAGCTTCCAGATGTGCTTGAAAGAGTCAAGTTCAGCTGTATGGCCTGGACCCATGATGGGAAGGGAATGTT CTACAACTCATACCCTCAACAGGATGGAAAAAGTGATGGCACAGAGACATCTACCAATCTCCACCAAAAGCTCTACTACCATGTCTTGGG AACCGATCAGTCAGAAGATATTTTGTGTGCTGAGTTTCCTGATGAACCTAAATGGATGGGTGGAGCTGAGTTATCTGATGATGGCCGCTA TGTCTTGTTATCAATAAGGGAAGGATGTGATCCAGTAAACCGACTCTGGTACTGTGACCTACAGCAGGAATCCAGTGGCATCGCGGGAAT CCTGAAGTGGGTAAAACTGATTGACAACTTTGAAGGGGAATATGACTACGTGACCAATGAGGGGACGGTGTTCACATTCAAGACGAATCG CCAGTCTCCCAACTATCGCGTGATCAACATTGACTTCAGGGATCCTGAAGAGTCTAAGTGGAAAGTACTTGTTCCTGAGCATGAGAAAGA TGTCTTAGAATGGATAGCTTGTGTCAGGTCCAACTTCTTGGTCTTATGCTACCTCCATGACGTCAAGAACATTCTGCAGCTCCATGACCT GACTACTGGTGCTCTCCTTAAGACCTTCCCGCTCGATGTCGGCAGCATTGTAGGGTACAGCGGTCAGAAGAAGGACACTGAAATCTTCTA TCAGTTTACTTCCTTTTTATCTCCAGGTATCATTTATCACTGTGATCTTACCAAAGAGGAGCTGGAGCCAAGAGTTTTCCGAGAGGTGAC CGTAAAAGGAATTGATGCTTCTGATTACCAGACAGTCCAGATTTTCTACCCTAGCAAGGATGGTACGAAGATTCCAATGTTCATTGTGCA TAAAAAAGGCATAAAATTGGATGGCTCTCATCCAGCTTTCTTATATGGCTATGGCGGCTTCAACATATCCATCACACCCAACTACAGTGT TTCCAGGCTTATTTTTGTGAGACACATGGGTGGTATCCTGGCAGTGGCCAACATCAGAGGAGGTGGCGAATATGGAGAGACGTGGCATAA AGGTGGTATCTTGGCCAACAAACAAAACTGCTTTGATGACTTTCAGTGTGCTGCTGAGTATCTGATCAAGGAAGGTTACACATCTCCCAA GAGGCTGACTATTAATGGAGGTTCAAATGGAGGCCTCTTAGTGGCTGCTTGTGCAAATCAGAGACCTGACCTCTTTGGTTGTGTTATTGC CCAAGTTGGAGTAATGGACATGCTGAAGTTTCATAAATATACCATCGGCCATGCTTGGACCACTGATTATGGGTGCTCGGACAGCAAACA ACACTTTGAATGGCTTGTCAAATACTCTCCATTGCATAATGTGAAGTTACCAGAAGCAGATGACATCCAGTACCCGTCCATGCTGCTCCT CACTGCTGACCATGATGACCGCGTGGTCCCGCTTCACTCCCTGAAGTTCATTGCCACCCTTCAGTACATCGTGGGCCGCAGCAGGAAGCA AAGCAACCCCCTGCTTATCCACGTGGACACCAAGGCGGGCCACGGGGCGGGGAAGCCCACAGCCAAAGTGATAGAGGAAGTCTCAGACAT GTTTGCGTTCATCGCGCGGTGCCTGAACGTCGACTGGATTCCATAAACAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGG GCTTTCCCACGTTGACACCAAGAAACCACTGGGCATAATGCTTCCCCACGGGAACATTATTCCTGCACTCACAGGCTACAGTTGAACAGA ACTGCCGTGGGAATTTTATCTTTTTTAGGCTTCTCCTTTTTAGCAAGGCCTTGGTGTTTCTTTTTCCACCCTGTCTAGGCACATGTGGTT TTTTGGTGTTTTTTTTAAGGGCATGTTGGGATAAATAGCTAAATGGCAACAAACACATTGTGAATATTAGATTGCTGAATTAAGGATCAT AGTCGGGCATACTTATCTATATCCATAACCTCTATATCTTTAAATAAATGTGAGAACTGTTCTCATGGAGAAGACTTCTTTGCAACAATA ATAAATGTTATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAA >In-frame_ENST00000346085_ENST00000369110_TCGA-E1-5304-01A_ARID1B_chr6_157150555_+_PREP_chr6_105845802_length(amino acids)=1274AA_start in transcript=1_stop in transcript=3825 MAHNAGAAAAAGTHSAKSGGSEAALKEGGSAAALSSSSSSSAAAAAASSSSSSGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHA HHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS KPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSAS AAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGG SSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPP SQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQ QSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQVQDYHGHKICDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKER MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFM KVDGAKELPDVLERVKFSCMAWTHDGKGMFYNSYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRY VLLSIREGCDPVNRLWYCDLQQESSGIAGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRQSPNYRVINIDFRDPEESKWKVLVPEHEKD VLEWIACVRSNFLVLCYLHDVKNILQLHDLTTGALLKTFPLDVGSIVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVT VKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGILAVANIRGGGEYGETWHK GGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQ HFEWLVKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQSNPLLIHVDTKAGHGAGKPTAKVIEEVSDM -------------------------------------------------------------- >In-frame_ENST00000367148_ENST00000369110_TCGA-E1-5304-01A_ARID1B_chr6_157150555_+_PREP_chr6_105845802_length(transcript)=4404nt_BP=1737nt ATGGCCCATAACGCGGGCGCCGCGGCCGCCGCCGGCACCCACAGCGCCAAGAGCGGCGGCTCCGAGGCGGCTCTCAAGGAGGGTGGAAGC GCCGCCGCGCTGTCCTCCTCCTCCTCCTCCTCCGCGGCGGCAGCGGCGGCATCCTCTTCCTCCTCGTCGGGCCCGGGCTCGGCCATGGAG ACGGGGCTGCTCCCCAACCACAAACTGAAAACCGTTGGCGAAGCCCCCGCCGCGCCGCCCCACCAGCAGCACCACCACCACCACCATGCC CACCACCACCACCACCATGCCCACCACCTCCACCACCACCACGCACTACAGCAGCAGCTAAACCAGTTCCAGCAGCAGCAGCAGCAGCAG CAACAGCAGCAGCAGCAGCAGCAGCAACAGCAACATCCCATTTCCAACAACAACAGCTTGGGCGGCGCGGGCGGCGGCGCGCCTCAGCCC GGCCCCGACATGGAGCAGCCGCAACATGGAGGCGCCAAGGACAGTGCTGCGGGCGGCCAGGCCGACCCCCCGGGCCCGCCGCTGCTGAGC AAGCCGGGCGACGAGGACGACGCGCCGCCCAAGATGGGGGAGCCGGCGGGCGGCCGCTACGAGCACCCGGGCTTGGGCGCCCTGGGCACG CAGCAGCCGCCGGTCGCCGTGCCCGGGGGCGGCGGCGGCCCGGCGGCCGTCCCGGAGTTTAATAATTACTATGGCAGCGCTGCCCCTGCG AGCGGCGGCCCCGGCGGCCGCGCTGGGCCTTGCTTTGATCAACATGGCGGACAACAAAGCCCCGGGATGGGGATGATGCACTCCGCCTCC GCCGCCGCCGCCGGGGCCCCCGGCAGCATGGACCCCCTGCAGAACTCCCACGAAGGGTACCCCAACAGCCAGTGCAACCATTATCCGGGC TACAGCCGGCCCGGCGCGGGCGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGCAGCGGAGGAGGAGGAGGAGGAGGAGGAGCAGGA GCAGGAGGAGCAGGAGCGGGAGCTGTGGCGGCGGCGGCCGCGGCGGCGGCGGCAGCAGCAGGAGGCGGCGGCGGCGGCGGCTATGGGGGC TCGTCCGCGGGGTACGGGGTGCTGAGCTCCCCCCGGCAGCAGGGCGGCGGCATGATGATGGGCCCCGGGGGCGGCGGGGCCGCGAGCCTC AGCAAGGCGGCCGCCGGCTCGGCGGCGGGGGGCTTCCAGCGCTTCGCCGGCCAGAACCAGCACCCGTCGGGGGCCACCCCGACCCTCAAT CAGCTGCTCACCTCGCCCAGCCCCATGATGCGGAGCTACGGCGGCAGCTACCCCGAGTACAGCAGCCCCAGCGCGCCGCCGCCGCCGCCG TCGCAGCCCCAGTCCCAGGCGGCGGCGGCGGGGGCGGCGGCGGGCGGCCAGCAGGCGGCCGCGGGCATGGGCTTGGGCAAGGACATGGGC GCCCAGTACGCCGCTGCCAGCCCGGCCTGGGCGGCCGCGCAACAAAGGAGTCACCCGGCGATGAGCCCCGGCACCCCCGGACCGACCATG GGCAGATCCCAGGGCAGCCCAATGGATCCAATGGTGATGAAGAGACCTCAGTTGTATGGCATGGGCAGTAACCCTCATTCTCAGCCTCAG CAGAGCAGTCCGTACCCAGGAGGTTCCTATGGCCCTCCAGGCCCACAGCGGTATCCAATTGGCATCCAGGGTCGGACTCCCGGGGCCATG GCCGGAATGCAGTACCCTCAGCAGCAGGTACAGGATTATCATGGTCATAAAATTTGTGACCCTTACGCCTGGCTTGAAGACCCCGACAGT GAACAGACTAAGGCCTTTGTGGAGGCCCAGAATAAGATTACTGTGCCATTTCTTGAGCAGTGTCCCATCAGAGGTTTATACAAAGAGAGA ATGACTGAACTATATGATTATCCCAAGTATAGTTGCCACTTCAAGAAAGGAAAACGGTATTTTTATTTTTACAATACAGGTTTGCAGAAC CAGCGAGTATTATATGTACAGGATTCCTTAGAGGGTGAGGCCAGAGTGTTCCTGGACCCCAACATACTGTCTGACGATGGCACAGTGGCA CTCCGAGGTTATGCGTTCAGCGAAGATGGTGAATATTTTGCCTATGGTCTGAGTGCCAGTGGCTCAGACTGGGTGACAATCAAGTTCATG AAAGTTGATGGTGCCAAAGAGCTTCCAGATGTGCTTGAAAGAGTCAAGTTCAGCTGTATGGCCTGGACCCATGATGGGAAGGGAATGTTC TACAACTCATACCCTCAACAGGATGGAAAAAGTGATGGCACAGAGACATCTACCAATCTCCACCAAAAGCTCTACTACCATGTCTTGGGA ACCGATCAGTCAGAAGATATTTTGTGTGCTGAGTTTCCTGATGAACCTAAATGGATGGGTGGAGCTGAGTTATCTGATGATGGCCGCTAT GTCTTGTTATCAATAAGGGAAGGATGTGATCCAGTAAACCGACTCTGGTACTGTGACCTACAGCAGGAATCCAGTGGCATCGCGGGAATC CTGAAGTGGGTAAAACTGATTGACAACTTTGAAGGGGAATATGACTACGTGACCAATGAGGGGACGGTGTTCACATTCAAGACGAATCGC CAGTCTCCCAACTATCGCGTGATCAACATTGACTTCAGGGATCCTGAAGAGTCTAAGTGGAAAGTACTTGTTCCTGAGCATGAGAAAGAT GTCTTAGAATGGATAGCTTGTGTCAGGTCCAACTTCTTGGTCTTATGCTACCTCCATGACGTCAAGAACATTCTGCAGCTCCATGACCTG ACTACTGGTGCTCTCCTTAAGACCTTCCCGCTCGATGTCGGCAGCATTGTAGGGTACAGCGGTCAGAAGAAGGACACTGAAATCTTCTAT CAGTTTACTTCCTTTTTATCTCCAGGTATCATTTATCACTGTGATCTTACCAAAGAGGAGCTGGAGCCAAGAGTTTTCCGAGAGGTGACC GTAAAAGGAATTGATGCTTCTGATTACCAGACAGTCCAGATTTTCTACCCTAGCAAGGATGGTACGAAGATTCCAATGTTCATTGTGCAT AAAAAAGGCATAAAATTGGATGGCTCTCATCCAGCTTTCTTATATGGCTATGGCGGCTTCAACATATCCATCACACCCAACTACAGTGTT TCCAGGCTTATTTTTGTGAGACACATGGGTGGTATCCTGGCAGTGGCCAACATCAGAGGAGGTGGCGAATATGGAGAGACGTGGCATAAA GGTGGTATCTTGGCCAACAAACAAAACTGCTTTGATGACTTTCAGTGTGCTGCTGAGTATCTGATCAAGGAAGGTTACACATCTCCCAAG AGGCTGACTATTAATGGAGGTTCAAATGGAGGCCTCTTAGTGGCTGCTTGTGCAAATCAGAGACCTGACCTCTTTGGTTGTGTTATTGCC CAAGTTGGAGTAATGGACATGCTGAAGTTTCATAAATATACCATCGGCCATGCTTGGACCACTGATTATGGGTGCTCGGACAGCAAACAA CACTTTGAATGGCTTGTCAAATACTCTCCATTGCATAATGTGAAGTTACCAGAAGCAGATGACATCCAGTACCCGTCCATGCTGCTCCTC ACTGCTGACCATGATGACCGCGTGGTCCCGCTTCACTCCCTGAAGTTCATTGCCACCCTTCAGTACATCGTGGGCCGCAGCAGGAAGCAA AGCAACCCCCTGCTTATCCACGTGGACACCAAGGCGGGCCACGGGGCGGGGAAGCCCACAGCCAAAGTGATAGAGGAAGTCTCAGACATG TTTGCGTTCATCGCGCGGTGCCTGAACGTCGACTGGATTCCATAAACAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGG CTTTCCCACGTTGACACCAAGAAACCACTGGGCATAATGCTTCCCCACGGGAACATTATTCCTGCACTCACAGGCTACAGTTGAACAGAA CTGCCGTGGGAATTTTATCTTTTTTAGGCTTCTCCTTTTTAGCAAGGCCTTGGTGTTTCTTTTTCCACCCTGTCTAGGCACATGTGGTTT TTTGGTGTTTTTTTTAAGGGCATGTTGGGATAAATAGCTAAATGGCAACAAACACATTGTGAATATTAGATTGCTGAATTAAGGATCATA GTCGGGCATACTTATCTATATCCATAACCTCTATATCTTTAAATAAATGTGAGAACTGTTCTCATGGAGAAGACTTCTTTGCAACAATAA TAAATGTTATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAG >In-frame_ENST00000367148_ENST00000369110_TCGA-E1-5304-01A_ARID1B_chr6_157150555_+_PREP_chr6_105845802_length(amino acids)=1274AA_start in transcript=0_stop in transcript=3824 MAHNAGAAAAAGTHSAKSGGSEAALKEGGSAAALSSSSSSSAAAAAASSSSSSGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHA HHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS KPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSAS AAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGG SSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPP SQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQ QSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQVQDYHGHKICDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKER MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFM KVDGAKELPDVLERVKFSCMAWTHDGKGMFYNSYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRY VLLSIREGCDPVNRLWYCDLQQESSGIAGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRQSPNYRVINIDFRDPEESKWKVLVPEHEKD VLEWIACVRSNFLVLCYLHDVKNILQLHDLTTGALLKTFPLDVGSIVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVT VKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGILAVANIRGGGEYGETWHK GGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQ HFEWLVKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQSNPLLIHVDTKAGHGAGKPTAKVIEEVSDM -------------------------------------------------------------- >In-frame_ENST00000275248_ENST00000369110_TCGA-E1-5304-01A_ARID1B_chr6_157150555_+_PREP_chr6_105845802_length(transcript)=4382nt_BP=1715nt CGGCCGCCGCCGGCACCCACAGCGCCAAGAGCGGCGGCTCCGAGGCGGCTCTCAAGGAGGGTGGAAGCGCCGCCGCGCTGTCCTCCTCCT CCTCCTCCTCCGCGGCGGCAGCGGCGGCATCCTCTTCCTCCTCGTCGGGCCCGGGCTCGGCCATGGAGACGGGGCTGCTCCCCAACCACA AACTGAAAACCGTTGGCGAAGCCCCCGCCGCGCCGCCCCACCAGCAGCACCACCACCACCACCATGCCCACCACCACCACCACCATGCCC ACCACCTCCACCACCACCACGCACTACAGCAGCAGCTAAACCAGTTCCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGC AGCAACAGCAACATCCCATTTCCAACAACAACAGCTTGGGCGGCGCGGGCGGCGGCGCGCCTCAGCCCGGCCCCGACATGGAGCAGCCGC AACATGGAGGCGCCAAGGACAGTGCTGCGGGCGGCCAGGCCGACCCCCCGGGCCCGCCGCTGCTGAGCAAGCCGGGCGACGAGGACGACG CGCCGCCCAAGATGGGGGAGCCGGCGGGCGGCCGCTACGAGCACCCGGGCTTGGGCGCCCTGGGCACGCAGCAGCCGCCGGTCGCCGTGC CCGGGGGCGGCGGCGGCCCGGCGGCCGTCCCGGAGTTTAATAATTACTATGGCAGCGCTGCCCCTGCGAGCGGCGGCCCCGGCGGCCGCG CTGGGCCTTGCTTTGATCAACATGGCGGACAACAAAGCCCCGGGATGGGGATGATGCACTCCGCCTCCGCCGCCGCCGCCGGGGCCCCCG GCAGCATGGACCCCCTGCAGAACTCCCACGAAGGGTACCCCAACAGCCAGTGCAACCATTATCCGGGCTACAGCCGGCCCGGCGCGGGCG GCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGCAGCGGAGGAGGAGGAGGAGGAGGAGGAGCAGGAGCAGGAGGAGCAGGAGCGGGAG CTGTGGCGGCGGCGGCCGCGGCGGCGGCGGCAGCAGCAGGAGGCGGCGGCGGCGGCGGCTATGGGGGCTCGTCCGCGGGGTACGGGGTGC TGAGCTCCCCCCGGCAGCAGGGCGGCGGCATGATGATGGGCCCCGGGGGCGGCGGGGCCGCGAGCCTCAGCAAGGCGGCCGCCGGCTCGG CGGCGGGGGGCTTCCAGCGCTTCGCCGGCCAGAACCAGCACCCGTCGGGGGCCACCCCGACCCTCAATCAGCTGCTCACCTCGCCCAGCC CCATGATGCGGAGCTACGGCGGCAGCTACCCCGAGTACAGCAGCCCCAGCGCGCCGCCGCCGCCGCCGTCGCAGCCCCAGTCCCAGGCGG CGGCGGCGGGGGCGGCGGCGGGCGGCCAGCAGGCGGCCGCGGGCATGGGCTTGGGCAAGGACATGGGCGCCCAGTACGCCGCTGCCAGCC CGGCCTGGGCGGCCGCGCAACAAAGGAGTCACCCGGCGATGAGCCCCGGCACCCCCGGACCGACCATGGGCAGATCCCAGGGCAGCCCAA TGGATCCAATGGTGATGAAGAGACCTCAGTTGTATGGCATGGGCAGTAACCCTCATTCTCAGCCTCAGCAGAGCAGTCCGTACCCAGGAG GTTCCTATGGCCCTCCAGGCCCACAGCGGTATCCAATTGGCATCCAGGGTCGGACTCCCGGGGCCATGGCCGGAATGCAGTACCCTCAGC AGCAGGTACAGGATTATCATGGTCATAAAATTTGTGACCCTTACGCCTGGCTTGAAGACCCCGACAGTGAACAGACTAAGGCCTTTGTGG AGGCCCAGAATAAGATTACTGTGCCATTTCTTGAGCAGTGTCCCATCAGAGGTTTATACAAAGAGAGAATGACTGAACTATATGATTATC CCAAGTATAGTTGCCACTTCAAGAAAGGAAAACGGTATTTTTATTTTTACAATACAGGTTTGCAGAACCAGCGAGTATTATATGTACAGG ATTCCTTAGAGGGTGAGGCCAGAGTGTTCCTGGACCCCAACATACTGTCTGACGATGGCACAGTGGCACTCCGAGGTTATGCGTTCAGCG AAGATGGTGAATATTTTGCCTATGGTCTGAGTGCCAGTGGCTCAGACTGGGTGACAATCAAGTTCATGAAAGTTGATGGTGCCAAAGAGC TTCCAGATGTGCTTGAAAGAGTCAAGTTCAGCTGTATGGCCTGGACCCATGATGGGAAGGGAATGTTCTACAACTCATACCCTCAACAGG ATGGAAAAAGTGATGGCACAGAGACATCTACCAATCTCCACCAAAAGCTCTACTACCATGTCTTGGGAACCGATCAGTCAGAAGATATTT TGTGTGCTGAGTTTCCTGATGAACCTAAATGGATGGGTGGAGCTGAGTTATCTGATGATGGCCGCTATGTCTTGTTATCAATAAGGGAAG GATGTGATCCAGTAAACCGACTCTGGTACTGTGACCTACAGCAGGAATCCAGTGGCATCGCGGGAATCCTGAAGTGGGTAAAACTGATTG ACAACTTTGAAGGGGAATATGACTACGTGACCAATGAGGGGACGGTGTTCACATTCAAGACGAATCGCCAGTCTCCCAACTATCGCGTGA TCAACATTGACTTCAGGGATCCTGAAGAGTCTAAGTGGAAAGTACTTGTTCCTGAGCATGAGAAAGATGTCTTAGAATGGATAGCTTGTG TCAGGTCCAACTTCTTGGTCTTATGCTACCTCCATGACGTCAAGAACATTCTGCAGCTCCATGACCTGACTACTGGTGCTCTCCTTAAGA CCTTCCCGCTCGATGTCGGCAGCATTGTAGGGTACAGCGGTCAGAAGAAGGACACTGAAATCTTCTATCAGTTTACTTCCTTTTTATCTC CAGGTATCATTTATCACTGTGATCTTACCAAAGAGGAGCTGGAGCCAAGAGTTTTCCGAGAGGTGACCGTAAAAGGAATTGATGCTTCTG ATTACCAGACAGTCCAGATTTTCTACCCTAGCAAGGATGGTACGAAGATTCCAATGTTCATTGTGCATAAAAAAGGCATAAAATTGGATG GCTCTCATCCAGCTTTCTTATATGGCTATGGCGGCTTCAACATATCCATCACACCCAACTACAGTGTTTCCAGGCTTATTTTTGTGAGAC ACATGGGTGGTATCCTGGCAGTGGCCAACATCAGAGGAGGTGGCGAATATGGAGAGACGTGGCATAAAGGTGGTATCTTGGCCAACAAAC AAAACTGCTTTGATGACTTTCAGTGTGCTGCTGAGTATCTGATCAAGGAAGGTTACACATCTCCCAAGAGGCTGACTATTAATGGAGGTT CAAATGGAGGCCTCTTAGTGGCTGCTTGTGCAAATCAGAGACCTGACCTCTTTGGTTGTGTTATTGCCCAAGTTGGAGTAATGGACATGC TGAAGTTTCATAAATATACCATCGGCCATGCTTGGACCACTGATTATGGGTGCTCGGACAGCAAACAACACTTTGAATGGCTTGTCAAAT ACTCTCCATTGCATAATGTGAAGTTACCAGAAGCAGATGACATCCAGTACCCGTCCATGCTGCTCCTCACTGCTGACCATGATGACCGCG TGGTCCCGCTTCACTCCCTGAAGTTCATTGCCACCCTTCAGTACATCGTGGGCCGCAGCAGGAAGCAAAGCAACCCCCTGCTTATCCACG TGGACACCAAGGCGGGCCACGGGGCGGGGAAGCCCACAGCCAAAGTGATAGAGGAAGTCTCAGACATGTTTGCGTTCATCGCGCGGTGCC TGAACGTCGACTGGATTCCATAAACAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGA AACCACTGGGCATAATGCTTCCCCACGGGAACATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTT TTTAGGCTTCTCCTTTTTAGCAAGGCCTTGGTGTTTCTTTTTCCACCCTGTCTAGGCACATGTGGTTTTTTGGTGTTTTTTTTAAGGGCA TGTTGGGATAAATAGCTAAATGGCAACAAACACATTGTGAATATTAGATTGCTGAATTAAGGATCATAGTCGGGCATACTTATCTATATC CATAACCTCTATATCTTTAAATAAATGTGAGAACTGTTCTCATGGAGAAGACTTCTTTGCAACAATAATAAATGTTATTTAAGAATGACA GGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACAAG >In-frame_ENST00000275248_ENST00000369110_TCGA-E1-5304-01A_ARID1B_chr6_157150555_+_PREP_chr6_105845802_length(amino acids)=1241AA_start in transcript=77_stop in transcript=3802 MSSSSSSSAAAAAASSSSSSGPGSAMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQ QQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQP PVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSR PGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKA AAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQY AAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGM QYPQQQVQDYHGHKICDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRV LYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNS YPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESSGIAGILKW VKLIDNFEGEYDYVTNEGTVFTFKTNRQSPNYRVINIDFRDPEESKWKVLVPEHEKDVLEWIACVRSNFLVLCYLHDVKNILQLHDLTTG ALLKTFPLDVGSIVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKG IKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGILAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLT INGGSNGGLLVAACANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQHFEWLVKYSPLHNVKLPEADDIQYPSMLLLTAD -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for ARID1B-PREP |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ARID1B-PREP |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for ARID1B-PREP |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | ARID1B | C0265338 | Coffin-Siris syndrome | 7 | CLINGEN;CTD_human;GENOMICS_ENGLAND |
| Hgene | ARID1B | C1535926 | Neurodevelopmental Disorders | 2 | CTD_human |
| Hgene | ARID1B | C3281201 | MENTAL RETARDATION, AUTOSOMAL DOMINANT 12 | 2 | GENOMICS_ENGLAND |
| Hgene | ARID1B | C0014544 | Epilepsy | 1 | CTD_human |
| Hgene | ARID1B | C0019569 | Hirschsprung Disease | 1 | GENOMICS_ENGLAND |
| Hgene | ARID1B | C0027819 | Neuroblastoma | 1 | CTD_human |
| Hgene | ARID1B | C0086237 | Epilepsy, Cryptogenic | 1 | CTD_human |
| Hgene | ARID1B | C0236018 | Aura | 1 | CTD_human |
| Hgene | ARID1B | C0751111 | Awakening Epilepsy | 1 | CTD_human |
| Hgene | ARID1B | C2239176 | Liver carcinoma | 1 | CGI;CTD_human |
| Hgene | ARID1B | C3150215 | CHROMOSOME 6q24-q25 DELETION SYNDROME | 1 | ORPHANET |
| Tgene | PREP | C0002622 | Amnesia | 1 | CTD_human |
| Tgene | PREP | C0002624 | Retrograde amnesia | 1 | CTD_human |
| Tgene | PREP | C0024623 | Malignant neoplasm of stomach | 1 | CTD_human |
| Tgene | PREP | C0038356 | Stomach Neoplasms | 1 | CTD_human |
| Tgene | PREP | C0233750 | Hysterical amnesia | 1 | CTD_human |
| Tgene | PREP | C0233796 | Temporary Amnesia | 1 | CTD_human |
| Tgene | PREP | C0235874 | Disease Exacerbation | 1 | CTD_human |
| Tgene | PREP | C0236795 | Dissociative Amnesia | 1 | CTD_human |
| Tgene | PREP | C0262497 | Global Amnesia | 1 | CTD_human |
| Tgene | PREP | C0338831 | Manic | 1 | PSYGENET |
| Tgene | PREP | C0750906 | Tactile Amnesia | 1 | CTD_human |
| Tgene | PREP | C0750907 | Amnestic State | 1 | CTD_human |
| Tgene | PREP | C0750908 | Pre-Ictal Amnesia | 1 | CTD_human |
| Tgene | PREP | C0750909 | Retrograde Memory Loss | 1 | CTD_human |
| Tgene | PREP | C0750910 | Pre-Ictal Memory Loss | 1 | CTD_human |
| Tgene | PREP | C1708349 | Hereditary Diffuse Gastric Cancer | 1 | CTD_human |
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