|
||||||
|
 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:PLEKHA1-CYP2C18 (FusionGDB2 ID:65742) |
Fusion Gene Summary for PLEKHA1-CYP2C18 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: PLEKHA1-CYP2C18 | Fusion gene ID: 65742 | Hgene | Tgene | Gene symbol | PLEKHA1 | CYP2C18 | Gene ID | 59338 | 1562 |
| Gene name | pleckstrin homology domain containing A1 | cytochrome P450 family 2 subfamily C member 18 | |
| Synonyms | TAPP1 | CPCI|CYP2C|CYP2C17|P450-6B/29C|P450IIC17 | |
| Cytomap | 10q26.13 | 10q23.33 | |
| Type of gene | protein-coding | protein-coding | |
| Description | pleckstrin homology domain-containing family A member 1pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1tandem PH domain-containing protein 1 | cytochrome P450 2C18(S)-mephenytoin hydroxylase associated cytochrome P450CYPIIC18cytochrome P450, family 2, subfamily C, polypeptide 18cytochrome P450, subfamily IIC (mephenytoin 4-hydroxylase), polypeptide 17cytochrome P450, subfamily IIC (mephenyt | |
| Modification date | 20200313 | 20200313 | |
| UniProtAcc | . | P33260 | |
| Ensembl transtripts involved in fusion gene | ENST00000494222, ENST00000368990, ENST00000368988, ENST00000368989, ENST00000538022, ENST00000433307, | ENST00000339022, ENST00000285979, | |
| Fusion gene scores | * DoF score | 8 X 7 X 7=392 | 4 X 3 X 3=36 |
| # samples | 9 | 6 | |
| ** MAII score | log2(9/392*10)=-2.12285674778553 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(6/36*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: PLEKHA1 [Title/Abstract] AND CYP2C18 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | PLEKHA1(124159904)-CYP2C18(96484102), # samples:1 | ||
| Anticipated loss of major functional domain due to fusion event. | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | PLEKHA1 | GO:0014065 | phosphatidylinositol 3-kinase signaling | 12101241 |
| Hgene | PLEKHA1 | GO:0031529 | ruffle organization | 15485858 |
| Hgene | PLEKHA1 | GO:0045184 | establishment of protein localization | 14516276 |
| Hgene | PLEKHA1 | GO:0050853 | B cell receptor signaling pathway | 12101241 |
| Hgene | PLEKHA1 | GO:0070301 | cellular response to hydrogen peroxide | 14516276 |
| Tgene | CYP2C18 | GO:0042573 | retinoic acid metabolic process | 11093772 |
| Fusion gene breakpoints across PLEKHA1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene breakpoints across CYP2C18 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | ESCA | TCGA-L5-A88Y | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + |
Top |
Fusion Gene ORF analysis for PLEKHA1-CYP2C18 |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| intron-3CDS | ENST00000494222 | ENST00000339022 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + |
| intron-3CDS | ENST00000494222 | ENST00000285979 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + |
| In-frame | ENST00000368990 | ENST00000339022 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + |
| In-frame | ENST00000368990 | ENST00000285979 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + |
| In-frame | ENST00000368988 | ENST00000339022 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + |
| In-frame | ENST00000368988 | ENST00000285979 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + |
| In-frame | ENST00000368989 | ENST00000339022 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + |
| In-frame | ENST00000368989 | ENST00000285979 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + |
| In-frame | ENST00000538022 | ENST00000339022 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + |
| In-frame | ENST00000538022 | ENST00000285979 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + |
| In-frame | ENST00000433307 | ENST00000339022 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + |
| In-frame | ENST00000433307 | ENST00000285979 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000368990 | PLEKHA1 | chr10 | 124159904 | + | ENST00000339022 | CYP2C18 | chr10 | 96484102 | + | 1631 | 375 | 131 | 886 | 251 |
| ENST00000368990 | PLEKHA1 | chr10 | 124159904 | + | ENST00000285979 | CYP2C18 | chr10 | 96484102 | + | 1633 | 375 | 131 | 886 | 251 |
| ENST00000368988 | PLEKHA1 | chr10 | 124159904 | + | ENST00000339022 | CYP2C18 | chr10 | 96484102 | + | 1623 | 367 | 123 | 878 | 251 |
| ENST00000368988 | PLEKHA1 | chr10 | 124159904 | + | ENST00000285979 | CYP2C18 | chr10 | 96484102 | + | 1625 | 367 | 123 | 878 | 251 |
| ENST00000368989 | PLEKHA1 | chr10 | 124159904 | + | ENST00000339022 | CYP2C18 | chr10 | 96484102 | + | 1608 | 352 | 108 | 863 | 251 |
| ENST00000368989 | PLEKHA1 | chr10 | 124159904 | + | ENST00000285979 | CYP2C18 | chr10 | 96484102 | + | 1610 | 352 | 108 | 863 | 251 |
| ENST00000538022 | PLEKHA1 | chr10 | 124159904 | + | ENST00000339022 | CYP2C18 | chr10 | 96484102 | + | 1709 | 453 | 209 | 964 | 251 |
| ENST00000538022 | PLEKHA1 | chr10 | 124159904 | + | ENST00000285979 | CYP2C18 | chr10 | 96484102 | + | 1711 | 453 | 209 | 964 | 251 |
| ENST00000433307 | PLEKHA1 | chr10 | 124159904 | + | ENST00000339022 | CYP2C18 | chr10 | 96484102 | + | 1522 | 266 | 22 | 777 | 251 |
| ENST00000433307 | PLEKHA1 | chr10 | 124159904 | + | ENST00000285979 | CYP2C18 | chr10 | 96484102 | + | 1524 | 266 | 22 | 777 | 251 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000368990 | ENST00000339022 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + | 0.000644607 | 0.9993554 |
| ENST00000368990 | ENST00000285979 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + | 0.000648555 | 0.99935144 |
| ENST00000368988 | ENST00000339022 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + | 0.000661875 | 0.9993381 |
| ENST00000368988 | ENST00000285979 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + | 0.000657492 | 0.9993425 |
| ENST00000368989 | ENST00000339022 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + | 0.000570758 | 0.99942917 |
| ENST00000368989 | ENST00000285979 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + | 0.000574467 | 0.99942553 |
| ENST00000538022 | ENST00000339022 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + | 0.00046439 | 0.9995357 |
| ENST00000538022 | ENST00000285979 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + | 0.000466635 | 0.9995334 |
| ENST00000433307 | ENST00000339022 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + | 0.000568053 | 0.9994319 |
| ENST00000433307 | ENST00000285979 | PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + | 0.000569542 | 0.9994305 |
Top |
Fusion Genomic Features for PLEKHA1-CYP2C18 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + | 4.58E-08 | 1 |
| PLEKHA1 | chr10 | 124159904 | + | CYP2C18 | chr10 | 96484102 | + | 4.58E-08 | 1 |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
Top |
Fusion Protein Features for PLEKHA1-CYP2C18 |
| Go to FGviewer for the breakpoints of chr10:124159904-chr10:96484102 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | CYP2C18 |
| FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: A cytochrome P450 monooxygenase involved in retinoid metabolism. Hydroxylates all trans-retinoic acid (atRA) to 4-hydroxyretinoate and may modulate atRA signaling and clearance. Mechanistically, uses molecular oxygen inserting one oxygen atom into a substrate, and reducing the second into a water molecule, with two electrons provided by NADPH via cytochrome P450 reductase (CPR; NADPH-ferrihemoprotein reductase). {ECO:0000269|PubMed:11093772}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | PLEKHA1 | chr10:124159904 | chr10:96484102 | ENST00000368990 | + | 4 | 12 | 191_289 | 81.33333333333333 | 405.0 | Domain | PH 2 |
| Hgene | PLEKHA1 | chr10:124159904 | chr10:96484102 | ENST00000368990 | + | 4 | 12 | 7_112 | 81.33333333333333 | 405.0 | Domain | PH 1 |
| Hgene | PLEKHA1 | chr10:124159904 | chr10:96484102 | ENST00000433307 | + | 3 | 11 | 191_289 | 81.33333333333333 | 405.0 | Domain | PH 2 |
| Hgene | PLEKHA1 | chr10:124159904 | chr10:96484102 | ENST00000433307 | + | 3 | 11 | 7_112 | 81.33333333333333 | 405.0 | Domain | PH 1 |
| Hgene | PLEKHA1 | chr10:124159904 | chr10:96484102 | ENST00000538022 | + | 5 | 14 | 191_289 | 81.33333333333333 | 461.6666666666667 | Domain | PH 2 |
| Hgene | PLEKHA1 | chr10:124159904 | chr10:96484102 | ENST00000538022 | + | 5 | 14 | 7_112 | 81.33333333333333 | 461.6666666666667 | Domain | PH 1 |
Top |
Fusion Gene Sequence for PLEKHA1-CYP2C18 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >In-frame_ENST00000368990_ENST00000339022_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(transcript)=1631nt_BP=375nt GGGGACGCGTGCGCAGTGCGCGGGCTGGCCGTCGCGGACGCCGCTCCGGGCAGCCGAGCCTCTGTGGGAGCCGGGGCCGCGGCGGCGCGG GTGCTCCGGGCCGAGGCCGCGTGTAATGTTCAAGCTCAGAAATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTG AAGAAAATGAAAACAGTGGGAAATTTCTTCGAAGGTACTTCATACTGGATACCAGAGAAGATAGTTTCGTGTGGTACATGGATAATCCAC AGAACCTACCTTCTGGATCATCACGTGTTGGAGCCATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCTACTAAGCTAAGGCCAAAGG CGGAGTTCTGTTTTGCTAAAGTCCAGGAAGAGATTGAATGTGTAGTTGGCAGAAACCGGAGCCCCTGTATGCAGGACAGGAGTCACATGC CCTACACAGATGCTGTGGTGCACGAGATCCAGAGATACATTGACCTCCTCCCCACCAACCTGCCCCATGCAGTGACCTGTGATGTTAAAT TCAAAAACTACCTCATCCCCAAGGGCACGACCATAATAACATCCCTGACTTCTGTGCTGCACAATGACAAAGAATTCCCCAACCCAGAGA TGTTTGACCCTGGCCACTTTCTGGATAAGAGTGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGGATGTGTA TGGGAGAGGGCCTGGCCCGCATGGAGCTGTTTTTATTCCTGACCACCATTTTGCAGAACTTTAACCTGAAATCTCAGGTTGACCCAAAGG ATATTGACATCACCCCCATTGCCAATGCATTTGGTCGTGTGCCACCCTTGTACCAGCTCTGCTTCATTCCTGTCTGAAGAAGGGCAGATA GTTTGGCTGCTCCTGTGCTGTCACCTGCAATTCTCCCTTATCAGGGCCATTGGCCTCTCCCTTCTCTCTGTGAGGGATATTTTCTCTGAC TTGTCAATCCACATCTTCCCATTCCCTCAAGATCCAATGAACATCCAACCTCCATTAAAGAGAGTTTCTTGGGTCACTTCCTAAATATAT CTGCTATTCTCCATACTCTGTATCACTTGTATTGACCACCACATATGCTAATACCTATCTACTGCTGAGTTGTCAGTATGTTATCACTAG AAAACAAAGAAAAATGATTAATAAATGACAATTCAGAGCCATTTATTCTCTGCATGCTCTAGATAAAAATGATTATTATTTACTGGGTCA GTTCTTAGATTTCTTTCTTTTGAGTAAAATGAAAGTAAGAAATGAAAGAAAATAGAATGTGAAGAGGCTGTGCTGGCCCTCATAGTGTTA AGCACAAAAAGGGAGAAAGGTAAGAGGGTAGGAAAGCTGTTTTAGCTAAATGCCACCTAGAGTTATTGGAGGTCTGAATTTGGAAAAAAA AACTATGTCCAGGAGCAGCTGTAACCTGTAGGGAAATACTGGAACAATCATCCATAAGAGGGATGAACATTAAGTGTTTGAATTCATGCT CTGCTTTTGTGTTACTGTAAACACAAGATCAAGATTTGGATAATCTTTTTCCTTTGTGTTTCCAACTTAGATCATGTCTAAATATATGCT >In-frame_ENST00000368990_ENST00000339022_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(amino acids)=251AA_start in transcript=131_stop in transcript=886 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIKLTYISKVSDATKLRPKAEFCFAKVQEEIEC VVGRNRSPCMQDRSHMPYTDAVVHEIQRYIDLLPTNLPHAVTCDVKFKNYLIPKGTTIITSLTSVLHNDKEFPNPEMFDPGHFLDKSGNF -------------------------------------------------------------- >In-frame_ENST00000368990_ENST00000285979_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(transcript)=1633nt_BP=375nt GGGGACGCGTGCGCAGTGCGCGGGCTGGCCGTCGCGGACGCCGCTCCGGGCAGCCGAGCCTCTGTGGGAGCCGGGGCCGCGGCGGCGCGG GTGCTCCGGGCCGAGGCCGCGTGTAATGTTCAAGCTCAGAAATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTG AAGAAAATGAAAACAGTGGGAAATTTCTTCGAAGGTACTTCATACTGGATACCAGAGAAGATAGTTTCGTGTGGTACATGGATAATCCAC AGAACCTACCTTCTGGATCATCACGTGTTGGAGCCATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCTACTAAGCTAAGGCCAAAGG CGGAGTTCTGTTTTGCTAAAGTCCAGGAAGAGATTGAATGTGTAGTTGGCAGAAACCGGAGCCCCTGTATGCAGGACAGGAGTCACATGC CCTACACAGATGCTGTGGTGCACGAGATCCAGAGATACATTGACCTCCTCCCCACCAACCTGCCCCATGCAGTGACCTGTGATGTTAAAT TCAAAAACTACCTCATCCCCAAGGGCACGACCATAATAACATCCCTGACTTCTGTGCTGCACAATGACAAAGAATTCCCCAACCCAGAGA TGTTTGACCCTGGCCACTTTCTGGATAAGAGTGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGGATGTGTA TGGGAGAGGGCCTGGCCCGCATGGAGCTGTTTTTATTCCTGACCACCATTTTGCAGAACTTTAACCTGAAATCTCAGGTTGACCCAAAGG ATATTGACATCACCCCCATTGCCAATGCATTTGGTCGTGTGCCACCCTTGTACCAGCTCTGCTTCATTCCTGTCTGAAGAAGGGCAGATA GTTTGGCTGCTCCTGTGCTGTCACCTGCAATTCTCCCTTATCAGGGCCATTGGCCTCTCCCTTCTCTCTGTGAGGGATATTTTCTCTGAC TTGTCAATCCACATCTTCCCATTCCCTCAAGATCCAATGAACATCCAACCTCCATTAAAGAGAGTTTCTTGGGTCACTTCCTAAATATAT CTGCTATTCTCCATACTCTGTATCACTTGTATTGACCACCACATATGCTAATACCTATCTACTGCTGAGTTGTCAGTATGTTATCACTAG AAAACAAAGAAAAATGATTAATAAATGACAATTCAGAGCCATTTATTCTCTGCATGCTCTAGATAAAAATGATTATTATTTACTGGGTCA GTTCTTAGATTTCTTTCTTTTGAGTAAAATGAAAGTAAGAAATGAAAGAAAATAGAATGTGAAGAGGCTGTGCTGGCCCTCATAGTGTTA AGCACAAAAAGGGAGAAAGGTAAGAGGGTAGGAAAGCTGTTTTAGCTAAATGCCACCTAGAGTTATTGGAGGTCTGAATTTGGAAAAAAA AACTATGTCCAGGAGCAGCTGTAACCTGTAGGGAAATACTGGAACAATCATCCATAAGAGGGATGAACATTAAGTGTTTGAATTCATGCT CTGCTTTTGTGTTACTGTAAACACAAGATCAAGATTTGGATAATCTTTTTCCTTTGTGTTTCCAACTTAGATCATGTCTAAATATATGCT >In-frame_ENST00000368990_ENST00000285979_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(amino acids)=251AA_start in transcript=131_stop in transcript=886 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIKLTYISKVSDATKLRPKAEFCFAKVQEEIEC VVGRNRSPCMQDRSHMPYTDAVVHEIQRYIDLLPTNLPHAVTCDVKFKNYLIPKGTTIITSLTSVLHNDKEFPNPEMFDPGHFLDKSGNF -------------------------------------------------------------- >In-frame_ENST00000368988_ENST00000339022_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(transcript)=1623nt_BP=367nt GTGCGCAGTGCGCGGGCTGGCCGTCGCGGACGCCGCTCCGGGCAGCCGAGCCTCTGTGGGAGCCGGGGCCGCGGCGGCGCGGGTGCTCCG GGCCGAGGCCGCGTGTAATGTTCAAGCTCAGAAATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTGAAGAAAAT GAAAACAGTGGGAAATTTCTTCGAAGGTACTTCATACTGGATACCAGAGAAGATAGTTTCGTGTGGTACATGGATAATCCACAGAACCTA CCTTCTGGATCATCACGTGTTGGAGCCATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCTACTAAGCTAAGGCCAAAGGCGGAGTTC TGTTTTGCTAAAGTCCAGGAAGAGATTGAATGTGTAGTTGGCAGAAACCGGAGCCCCTGTATGCAGGACAGGAGTCACATGCCCTACACA GATGCTGTGGTGCACGAGATCCAGAGATACATTGACCTCCTCCCCACCAACCTGCCCCATGCAGTGACCTGTGATGTTAAATTCAAAAAC TACCTCATCCCCAAGGGCACGACCATAATAACATCCCTGACTTCTGTGCTGCACAATGACAAAGAATTCCCCAACCCAGAGATGTTTGAC CCTGGCCACTTTCTGGATAAGAGTGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGGATGTGTATGGGAGAG GGCCTGGCCCGCATGGAGCTGTTTTTATTCCTGACCACCATTTTGCAGAACTTTAACCTGAAATCTCAGGTTGACCCAAAGGATATTGAC ATCACCCCCATTGCCAATGCATTTGGTCGTGTGCCACCCTTGTACCAGCTCTGCTTCATTCCTGTCTGAAGAAGGGCAGATAGTTTGGCT GCTCCTGTGCTGTCACCTGCAATTCTCCCTTATCAGGGCCATTGGCCTCTCCCTTCTCTCTGTGAGGGATATTTTCTCTGACTTGTCAAT CCACATCTTCCCATTCCCTCAAGATCCAATGAACATCCAACCTCCATTAAAGAGAGTTTCTTGGGTCACTTCCTAAATATATCTGCTATT CTCCATACTCTGTATCACTTGTATTGACCACCACATATGCTAATACCTATCTACTGCTGAGTTGTCAGTATGTTATCACTAGAAAACAAA GAAAAATGATTAATAAATGACAATTCAGAGCCATTTATTCTCTGCATGCTCTAGATAAAAATGATTATTATTTACTGGGTCAGTTCTTAG ATTTCTTTCTTTTGAGTAAAATGAAAGTAAGAAATGAAAGAAAATAGAATGTGAAGAGGCTGTGCTGGCCCTCATAGTGTTAAGCACAAA AAGGGAGAAAGGTAAGAGGGTAGGAAAGCTGTTTTAGCTAAATGCCACCTAGAGTTATTGGAGGTCTGAATTTGGAAAAAAAAACTATGT CCAGGAGCAGCTGTAACCTGTAGGGAAATACTGGAACAATCATCCATAAGAGGGATGAACATTAAGTGTTTGAATTCATGCTCTGCTTTT GTGTTACTGTAAACACAAGATCAAGATTTGGATAATCTTTTTCCTTTGTGTTTCCAACTTAGATCATGTCTAAATATATGCTTTCATATG >In-frame_ENST00000368988_ENST00000339022_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(amino acids)=251AA_start in transcript=123_stop in transcript=878 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIKLTYISKVSDATKLRPKAEFCFAKVQEEIEC VVGRNRSPCMQDRSHMPYTDAVVHEIQRYIDLLPTNLPHAVTCDVKFKNYLIPKGTTIITSLTSVLHNDKEFPNPEMFDPGHFLDKSGNF -------------------------------------------------------------- >In-frame_ENST00000368988_ENST00000285979_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(transcript)=1625nt_BP=367nt GTGCGCAGTGCGCGGGCTGGCCGTCGCGGACGCCGCTCCGGGCAGCCGAGCCTCTGTGGGAGCCGGGGCCGCGGCGGCGCGGGTGCTCCG GGCCGAGGCCGCGTGTAATGTTCAAGCTCAGAAATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTGAAGAAAAT GAAAACAGTGGGAAATTTCTTCGAAGGTACTTCATACTGGATACCAGAGAAGATAGTTTCGTGTGGTACATGGATAATCCACAGAACCTA CCTTCTGGATCATCACGTGTTGGAGCCATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCTACTAAGCTAAGGCCAAAGGCGGAGTTC TGTTTTGCTAAAGTCCAGGAAGAGATTGAATGTGTAGTTGGCAGAAACCGGAGCCCCTGTATGCAGGACAGGAGTCACATGCCCTACACA GATGCTGTGGTGCACGAGATCCAGAGATACATTGACCTCCTCCCCACCAACCTGCCCCATGCAGTGACCTGTGATGTTAAATTCAAAAAC TACCTCATCCCCAAGGGCACGACCATAATAACATCCCTGACTTCTGTGCTGCACAATGACAAAGAATTCCCCAACCCAGAGATGTTTGAC CCTGGCCACTTTCTGGATAAGAGTGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGGATGTGTATGGGAGAG GGCCTGGCCCGCATGGAGCTGTTTTTATTCCTGACCACCATTTTGCAGAACTTTAACCTGAAATCTCAGGTTGACCCAAAGGATATTGAC ATCACCCCCATTGCCAATGCATTTGGTCGTGTGCCACCCTTGTACCAGCTCTGCTTCATTCCTGTCTGAAGAAGGGCAGATAGTTTGGCT GCTCCTGTGCTGTCACCTGCAATTCTCCCTTATCAGGGCCATTGGCCTCTCCCTTCTCTCTGTGAGGGATATTTTCTCTGACTTGTCAAT CCACATCTTCCCATTCCCTCAAGATCCAATGAACATCCAACCTCCATTAAAGAGAGTTTCTTGGGTCACTTCCTAAATATATCTGCTATT CTCCATACTCTGTATCACTTGTATTGACCACCACATATGCTAATACCTATCTACTGCTGAGTTGTCAGTATGTTATCACTAGAAAACAAA GAAAAATGATTAATAAATGACAATTCAGAGCCATTTATTCTCTGCATGCTCTAGATAAAAATGATTATTATTTACTGGGTCAGTTCTTAG ATTTCTTTCTTTTGAGTAAAATGAAAGTAAGAAATGAAAGAAAATAGAATGTGAAGAGGCTGTGCTGGCCCTCATAGTGTTAAGCACAAA AAGGGAGAAAGGTAAGAGGGTAGGAAAGCTGTTTTAGCTAAATGCCACCTAGAGTTATTGGAGGTCTGAATTTGGAAAAAAAAACTATGT CCAGGAGCAGCTGTAACCTGTAGGGAAATACTGGAACAATCATCCATAAGAGGGATGAACATTAAGTGTTTGAATTCATGCTCTGCTTTT GTGTTACTGTAAACACAAGATCAAGATTTGGATAATCTTTTTCCTTTGTGTTTCCAACTTAGATCATGTCTAAATATATGCTTTCATATG >In-frame_ENST00000368988_ENST00000285979_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(amino acids)=251AA_start in transcript=123_stop in transcript=878 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIKLTYISKVSDATKLRPKAEFCFAKVQEEIEC VVGRNRSPCMQDRSHMPYTDAVVHEIQRYIDLLPTNLPHAVTCDVKFKNYLIPKGTTIITSLTSVLHNDKEFPNPEMFDPGHFLDKSGNF -------------------------------------------------------------- >In-frame_ENST00000368989_ENST00000339022_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(transcript)=1608nt_BP=352nt TGGGAGCCGGGGCCGCGGCGGCGCGGGTGCTCCGGGCCGAGGCCGCGGTAAAGTTTAGCTTGAAGAACGCGGCCGCGCTGGAGCAGGGTG TAATGTTCAAGCTCAGAAATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTGAAGAAAATGAAAACAGTGGGAAA TTTCTTCGAAGGTACTTCATACTGGATACCAGAGAAGATAGTTTCGTGTGGTACATGGATAATCCACAGAACCTACCTTCTGGATCATCA CGTGTTGGAGCCATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCTACTAAGCTAAGGCCAAAGGCGGAGTTCTGTTTTGCTAAAGTC CAGGAAGAGATTGAATGTGTAGTTGGCAGAAACCGGAGCCCCTGTATGCAGGACAGGAGTCACATGCCCTACACAGATGCTGTGGTGCAC GAGATCCAGAGATACATTGACCTCCTCCCCACCAACCTGCCCCATGCAGTGACCTGTGATGTTAAATTCAAAAACTACCTCATCCCCAAG GGCACGACCATAATAACATCCCTGACTTCTGTGCTGCACAATGACAAAGAATTCCCCAACCCAGAGATGTTTGACCCTGGCCACTTTCTG GATAAGAGTGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGGATGTGTATGGGAGAGGGCCTGGCCCGCATG GAGCTGTTTTTATTCCTGACCACCATTTTGCAGAACTTTAACCTGAAATCTCAGGTTGACCCAAAGGATATTGACATCACCCCCATTGCC AATGCATTTGGTCGTGTGCCACCCTTGTACCAGCTCTGCTTCATTCCTGTCTGAAGAAGGGCAGATAGTTTGGCTGCTCCTGTGCTGTCA CCTGCAATTCTCCCTTATCAGGGCCATTGGCCTCTCCCTTCTCTCTGTGAGGGATATTTTCTCTGACTTGTCAATCCACATCTTCCCATT CCCTCAAGATCCAATGAACATCCAACCTCCATTAAAGAGAGTTTCTTGGGTCACTTCCTAAATATATCTGCTATTCTCCATACTCTGTAT CACTTGTATTGACCACCACATATGCTAATACCTATCTACTGCTGAGTTGTCAGTATGTTATCACTAGAAAACAAAGAAAAATGATTAATA AATGACAATTCAGAGCCATTTATTCTCTGCATGCTCTAGATAAAAATGATTATTATTTACTGGGTCAGTTCTTAGATTTCTTTCTTTTGA GTAAAATGAAAGTAAGAAATGAAAGAAAATAGAATGTGAAGAGGCTGTGCTGGCCCTCATAGTGTTAAGCACAAAAAGGGAGAAAGGTAA GAGGGTAGGAAAGCTGTTTTAGCTAAATGCCACCTAGAGTTATTGGAGGTCTGAATTTGGAAAAAAAAACTATGTCCAGGAGCAGCTGTA ACCTGTAGGGAAATACTGGAACAATCATCCATAAGAGGGATGAACATTAAGTGTTTGAATTCATGCTCTGCTTTTGTGTTACTGTAAACA >In-frame_ENST00000368989_ENST00000339022_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(amino acids)=251AA_start in transcript=108_stop in transcript=863 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIKLTYISKVSDATKLRPKAEFCFAKVQEEIEC VVGRNRSPCMQDRSHMPYTDAVVHEIQRYIDLLPTNLPHAVTCDVKFKNYLIPKGTTIITSLTSVLHNDKEFPNPEMFDPGHFLDKSGNF -------------------------------------------------------------- >In-frame_ENST00000368989_ENST00000285979_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(transcript)=1610nt_BP=352nt TGGGAGCCGGGGCCGCGGCGGCGCGGGTGCTCCGGGCCGAGGCCGCGGTAAAGTTTAGCTTGAAGAACGCGGCCGCGCTGGAGCAGGGTG TAATGTTCAAGCTCAGAAATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTGAAGAAAATGAAAACAGTGGGAAA TTTCTTCGAAGGTACTTCATACTGGATACCAGAGAAGATAGTTTCGTGTGGTACATGGATAATCCACAGAACCTACCTTCTGGATCATCA CGTGTTGGAGCCATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCTACTAAGCTAAGGCCAAAGGCGGAGTTCTGTTTTGCTAAAGTC CAGGAAGAGATTGAATGTGTAGTTGGCAGAAACCGGAGCCCCTGTATGCAGGACAGGAGTCACATGCCCTACACAGATGCTGTGGTGCAC GAGATCCAGAGATACATTGACCTCCTCCCCACCAACCTGCCCCATGCAGTGACCTGTGATGTTAAATTCAAAAACTACCTCATCCCCAAG GGCACGACCATAATAACATCCCTGACTTCTGTGCTGCACAATGACAAAGAATTCCCCAACCCAGAGATGTTTGACCCTGGCCACTTTCTG GATAAGAGTGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGGATGTGTATGGGAGAGGGCCTGGCCCGCATG GAGCTGTTTTTATTCCTGACCACCATTTTGCAGAACTTTAACCTGAAATCTCAGGTTGACCCAAAGGATATTGACATCACCCCCATTGCC AATGCATTTGGTCGTGTGCCACCCTTGTACCAGCTCTGCTTCATTCCTGTCTGAAGAAGGGCAGATAGTTTGGCTGCTCCTGTGCTGTCA CCTGCAATTCTCCCTTATCAGGGCCATTGGCCTCTCCCTTCTCTCTGTGAGGGATATTTTCTCTGACTTGTCAATCCACATCTTCCCATT CCCTCAAGATCCAATGAACATCCAACCTCCATTAAAGAGAGTTTCTTGGGTCACTTCCTAAATATATCTGCTATTCTCCATACTCTGTAT CACTTGTATTGACCACCACATATGCTAATACCTATCTACTGCTGAGTTGTCAGTATGTTATCACTAGAAAACAAAGAAAAATGATTAATA AATGACAATTCAGAGCCATTTATTCTCTGCATGCTCTAGATAAAAATGATTATTATTTACTGGGTCAGTTCTTAGATTTCTTTCTTTTGA GTAAAATGAAAGTAAGAAATGAAAGAAAATAGAATGTGAAGAGGCTGTGCTGGCCCTCATAGTGTTAAGCACAAAAAGGGAGAAAGGTAA GAGGGTAGGAAAGCTGTTTTAGCTAAATGCCACCTAGAGTTATTGGAGGTCTGAATTTGGAAAAAAAAACTATGTCCAGGAGCAGCTGTA ACCTGTAGGGAAATACTGGAACAATCATCCATAAGAGGGATGAACATTAAGTGTTTGAATTCATGCTCTGCTTTTGTGTTACTGTAAACA >In-frame_ENST00000368989_ENST00000285979_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(amino acids)=251AA_start in transcript=108_stop in transcript=863 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIKLTYISKVSDATKLRPKAEFCFAKVQEEIEC VVGRNRSPCMQDRSHMPYTDAVVHEIQRYIDLLPTNLPHAVTCDVKFKNYLIPKGTTIITSLTSVLHNDKEFPNPEMFDPGHFLDKSGNF -------------------------------------------------------------- >In-frame_ENST00000538022_ENST00000339022_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(transcript)=1709nt_BP=453nt AAAGTTGCTATGTCATTTTGCATTTCCACCAGCAATATATGATAGTTCGTTTATTTCACATCTTTGACAGCATTTAGTGTTGTCAGGGTT TTTTTTGTTTGTTTTAGACATTTTAGTAGTCTGGCTCTTGCTGATTGAATTCCTTTGGTGCAGTTTAGCATGTTCCTCTGTGTTCTGCAT CTCCTGTAGTGTAATGTTCAAGCTCAGAAATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTGAAGAAAATGAAA ACAGTGGGAAATTTCTTCGAAGGTACTTCATACTGGATACCAGAGAAGATAGTTTCGTGTGGTACATGGATAATCCACAGAACCTACCTT CTGGATCATCACGTGTTGGAGCCATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCTACTAAGCTAAGGCCAAAGGCGGAGTTCTGTT TTGCTAAAGTCCAGGAAGAGATTGAATGTGTAGTTGGCAGAAACCGGAGCCCCTGTATGCAGGACAGGAGTCACATGCCCTACACAGATG CTGTGGTGCACGAGATCCAGAGATACATTGACCTCCTCCCCACCAACCTGCCCCATGCAGTGACCTGTGATGTTAAATTCAAAAACTACC TCATCCCCAAGGGCACGACCATAATAACATCCCTGACTTCTGTGCTGCACAATGACAAAGAATTCCCCAACCCAGAGATGTTTGACCCTG GCCACTTTCTGGATAAGAGTGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGGATGTGTATGGGAGAGGGCC TGGCCCGCATGGAGCTGTTTTTATTCCTGACCACCATTTTGCAGAACTTTAACCTGAAATCTCAGGTTGACCCAAAGGATATTGACATCA CCCCCATTGCCAATGCATTTGGTCGTGTGCCACCCTTGTACCAGCTCTGCTTCATTCCTGTCTGAAGAAGGGCAGATAGTTTGGCTGCTC CTGTGCTGTCACCTGCAATTCTCCCTTATCAGGGCCATTGGCCTCTCCCTTCTCTCTGTGAGGGATATTTTCTCTGACTTGTCAATCCAC ATCTTCCCATTCCCTCAAGATCCAATGAACATCCAACCTCCATTAAAGAGAGTTTCTTGGGTCACTTCCTAAATATATCTGCTATTCTCC ATACTCTGTATCACTTGTATTGACCACCACATATGCTAATACCTATCTACTGCTGAGTTGTCAGTATGTTATCACTAGAAAACAAAGAAA AATGATTAATAAATGACAATTCAGAGCCATTTATTCTCTGCATGCTCTAGATAAAAATGATTATTATTTACTGGGTCAGTTCTTAGATTT CTTTCTTTTGAGTAAAATGAAAGTAAGAAATGAAAGAAAATAGAATGTGAAGAGGCTGTGCTGGCCCTCATAGTGTTAAGCACAAAAAGG GAGAAAGGTAAGAGGGTAGGAAAGCTGTTTTAGCTAAATGCCACCTAGAGTTATTGGAGGTCTGAATTTGGAAAAAAAAACTATGTCCAG GAGCAGCTGTAACCTGTAGGGAAATACTGGAACAATCATCCATAAGAGGGATGAACATTAAGTGTTTGAATTCATGCTCTGCTTTTGTGT >In-frame_ENST00000538022_ENST00000339022_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(amino acids)=251AA_start in transcript=209_stop in transcript=964 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIKLTYISKVSDATKLRPKAEFCFAKVQEEIEC VVGRNRSPCMQDRSHMPYTDAVVHEIQRYIDLLPTNLPHAVTCDVKFKNYLIPKGTTIITSLTSVLHNDKEFPNPEMFDPGHFLDKSGNF -------------------------------------------------------------- >In-frame_ENST00000538022_ENST00000285979_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(transcript)=1711nt_BP=453nt AAAGTTGCTATGTCATTTTGCATTTCCACCAGCAATATATGATAGTTCGTTTATTTCACATCTTTGACAGCATTTAGTGTTGTCAGGGTT TTTTTTGTTTGTTTTAGACATTTTAGTAGTCTGGCTCTTGCTGATTGAATTCCTTTGGTGCAGTTTAGCATGTTCCTCTGTGTTCTGCAT CTCCTGTAGTGTAATGTTCAAGCTCAGAAATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTGAAGAAAATGAAA ACAGTGGGAAATTTCTTCGAAGGTACTTCATACTGGATACCAGAGAAGATAGTTTCGTGTGGTACATGGATAATCCACAGAACCTACCTT CTGGATCATCACGTGTTGGAGCCATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCTACTAAGCTAAGGCCAAAGGCGGAGTTCTGTT TTGCTAAAGTCCAGGAAGAGATTGAATGTGTAGTTGGCAGAAACCGGAGCCCCTGTATGCAGGACAGGAGTCACATGCCCTACACAGATG CTGTGGTGCACGAGATCCAGAGATACATTGACCTCCTCCCCACCAACCTGCCCCATGCAGTGACCTGTGATGTTAAATTCAAAAACTACC TCATCCCCAAGGGCACGACCATAATAACATCCCTGACTTCTGTGCTGCACAATGACAAAGAATTCCCCAACCCAGAGATGTTTGACCCTG GCCACTTTCTGGATAAGAGTGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGGATGTGTATGGGAGAGGGCC TGGCCCGCATGGAGCTGTTTTTATTCCTGACCACCATTTTGCAGAACTTTAACCTGAAATCTCAGGTTGACCCAAAGGATATTGACATCA CCCCCATTGCCAATGCATTTGGTCGTGTGCCACCCTTGTACCAGCTCTGCTTCATTCCTGTCTGAAGAAGGGCAGATAGTTTGGCTGCTC CTGTGCTGTCACCTGCAATTCTCCCTTATCAGGGCCATTGGCCTCTCCCTTCTCTCTGTGAGGGATATTTTCTCTGACTTGTCAATCCAC ATCTTCCCATTCCCTCAAGATCCAATGAACATCCAACCTCCATTAAAGAGAGTTTCTTGGGTCACTTCCTAAATATATCTGCTATTCTCC ATACTCTGTATCACTTGTATTGACCACCACATATGCTAATACCTATCTACTGCTGAGTTGTCAGTATGTTATCACTAGAAAACAAAGAAA AATGATTAATAAATGACAATTCAGAGCCATTTATTCTCTGCATGCTCTAGATAAAAATGATTATTATTTACTGGGTCAGTTCTTAGATTT CTTTCTTTTGAGTAAAATGAAAGTAAGAAATGAAAGAAAATAGAATGTGAAGAGGCTGTGCTGGCCCTCATAGTGTTAAGCACAAAAAGG GAGAAAGGTAAGAGGGTAGGAAAGCTGTTTTAGCTAAATGCCACCTAGAGTTATTGGAGGTCTGAATTTGGAAAAAAAAACTATGTCCAG GAGCAGCTGTAACCTGTAGGGAAATACTGGAACAATCATCCATAAGAGGGATGAACATTAAGTGTTTGAATTCATGCTCTGCTTTTGTGT TACTGTAAACACAAGATCAAGATTTGGATAATCTTTTTCCTTTGTGTTTCCAACTTAGATCATGTCTAAATATATGCTTTCATATGGCTA >In-frame_ENST00000538022_ENST00000285979_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(amino acids)=251AA_start in transcript=209_stop in transcript=964 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIKLTYISKVSDATKLRPKAEFCFAKVQEEIEC VVGRNRSPCMQDRSHMPYTDAVVHEIQRYIDLLPTNLPHAVTCDVKFKNYLIPKGTTIITSLTSVLHNDKEFPNPEMFDPGHFLDKSGNF -------------------------------------------------------------- >In-frame_ENST00000433307_ENST00000339022_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(transcript)=1522nt_BP=266nt AGTGTAATGTTCAAGCTCAGAAATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTGAAGAAAATGAAAACAGTGG GAAATTTCTTCGAAGGTACTTCATACTGGATACCAGAGAAGATAGTTTCGTGTGGTACATGGATAATCCACAGAACCTACCTTCTGGATC ATCACGTGTTGGAGCCATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCTACTAAGCTAAGGCCAAAGGCGGAGTTCTGTTTTGCTAA AGTCCAGGAAGAGATTGAATGTGTAGTTGGCAGAAACCGGAGCCCCTGTATGCAGGACAGGAGTCACATGCCCTACACAGATGCTGTGGT GCACGAGATCCAGAGATACATTGACCTCCTCCCCACCAACCTGCCCCATGCAGTGACCTGTGATGTTAAATTCAAAAACTACCTCATCCC CAAGGGCACGACCATAATAACATCCCTGACTTCTGTGCTGCACAATGACAAAGAATTCCCCAACCCAGAGATGTTTGACCCTGGCCACTT TCTGGATAAGAGTGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGGATGTGTATGGGAGAGGGCCTGGCCCG CATGGAGCTGTTTTTATTCCTGACCACCATTTTGCAGAACTTTAACCTGAAATCTCAGGTTGACCCAAAGGATATTGACATCACCCCCAT TGCCAATGCATTTGGTCGTGTGCCACCCTTGTACCAGCTCTGCTTCATTCCTGTCTGAAGAAGGGCAGATAGTTTGGCTGCTCCTGTGCT GTCACCTGCAATTCTCCCTTATCAGGGCCATTGGCCTCTCCCTTCTCTCTGTGAGGGATATTTTCTCTGACTTGTCAATCCACATCTTCC CATTCCCTCAAGATCCAATGAACATCCAACCTCCATTAAAGAGAGTTTCTTGGGTCACTTCCTAAATATATCTGCTATTCTCCATACTCT GTATCACTTGTATTGACCACCACATATGCTAATACCTATCTACTGCTGAGTTGTCAGTATGTTATCACTAGAAAACAAAGAAAAATGATT AATAAATGACAATTCAGAGCCATTTATTCTCTGCATGCTCTAGATAAAAATGATTATTATTTACTGGGTCAGTTCTTAGATTTCTTTCTT TTGAGTAAAATGAAAGTAAGAAATGAAAGAAAATAGAATGTGAAGAGGCTGTGCTGGCCCTCATAGTGTTAAGCACAAAAAGGGAGAAAG GTAAGAGGGTAGGAAAGCTGTTTTAGCTAAATGCCACCTAGAGTTATTGGAGGTCTGAATTTGGAAAAAAAAACTATGTCCAGGAGCAGC TGTAACCTGTAGGGAAATACTGGAACAATCATCCATAAGAGGGATGAACATTAAGTGTTTGAATTCATGCTCTGCTTTTGTGTTACTGTA >In-frame_ENST00000433307_ENST00000339022_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(amino acids)=251AA_start in transcript=22_stop in transcript=777 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIKLTYISKVSDATKLRPKAEFCFAKVQEEIEC VVGRNRSPCMQDRSHMPYTDAVVHEIQRYIDLLPTNLPHAVTCDVKFKNYLIPKGTTIITSLTSVLHNDKEFPNPEMFDPGHFLDKSGNF -------------------------------------------------------------- >In-frame_ENST00000433307_ENST00000285979_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(transcript)=1524nt_BP=266nt AGTGTAATGTTCAAGCTCAGAAATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTGAAGAAAATGAAAACAGTGG GAAATTTCTTCGAAGGTACTTCATACTGGATACCAGAGAAGATAGTTTCGTGTGGTACATGGATAATCCACAGAACCTACCTTCTGGATC ATCACGTGTTGGAGCCATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCTACTAAGCTAAGGCCAAAGGCGGAGTTCTGTTTTGCTAA AGTCCAGGAAGAGATTGAATGTGTAGTTGGCAGAAACCGGAGCCCCTGTATGCAGGACAGGAGTCACATGCCCTACACAGATGCTGTGGT GCACGAGATCCAGAGATACATTGACCTCCTCCCCACCAACCTGCCCCATGCAGTGACCTGTGATGTTAAATTCAAAAACTACCTCATCCC CAAGGGCACGACCATAATAACATCCCTGACTTCTGTGCTGCACAATGACAAAGAATTCCCCAACCCAGAGATGTTTGACCCTGGCCACTT TCTGGATAAGAGTGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGGATGTGTATGGGAGAGGGCCTGGCCCG CATGGAGCTGTTTTTATTCCTGACCACCATTTTGCAGAACTTTAACCTGAAATCTCAGGTTGACCCAAAGGATATTGACATCACCCCCAT TGCCAATGCATTTGGTCGTGTGCCACCCTTGTACCAGCTCTGCTTCATTCCTGTCTGAAGAAGGGCAGATAGTTTGGCTGCTCCTGTGCT GTCACCTGCAATTCTCCCTTATCAGGGCCATTGGCCTCTCCCTTCTCTCTGTGAGGGATATTTTCTCTGACTTGTCAATCCACATCTTCC CATTCCCTCAAGATCCAATGAACATCCAACCTCCATTAAAGAGAGTTTCTTGGGTCACTTCCTAAATATATCTGCTATTCTCCATACTCT GTATCACTTGTATTGACCACCACATATGCTAATACCTATCTACTGCTGAGTTGTCAGTATGTTATCACTAGAAAACAAAGAAAAATGATT AATAAATGACAATTCAGAGCCATTTATTCTCTGCATGCTCTAGATAAAAATGATTATTATTTACTGGGTCAGTTCTTAGATTTCTTTCTT TTGAGTAAAATGAAAGTAAGAAATGAAAGAAAATAGAATGTGAAGAGGCTGTGCTGGCCCTCATAGTGTTAAGCACAAAAAGGGAGAAAG GTAAGAGGGTAGGAAAGCTGTTTTAGCTAAATGCCACCTAGAGTTATTGGAGGTCTGAATTTGGAAAAAAAAACTATGTCCAGGAGCAGC TGTAACCTGTAGGGAAATACTGGAACAATCATCCATAAGAGGGATGAACATTAAGTGTTTGAATTCATGCTCTGCTTTTGTGTTACTGTA >In-frame_ENST00000433307_ENST00000285979_TCGA-L5-A88Y_PLEKHA1_chr10_124159904_+_CYP2C18_chr10_96484102_length(amino acids)=251AA_start in transcript=22_stop in transcript=777 MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIKLTYISKVSDATKLRPKAEFCFAKVQEEIEC VVGRNRSPCMQDRSHMPYTDAVVHEIQRYIDLLPTNLPHAVTCDVKFKNYLIPKGTTIITSLTSVLHNDKEFPNPEMFDPGHFLDKSGNF -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for PLEKHA1-CYP2C18 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for PLEKHA1-CYP2C18 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
Related Diseases for PLEKHA1-CYP2C18 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | PLEKHA1 | C0011860 | Diabetes Mellitus, Non-Insulin-Dependent | 1 | CTD_human |
| Tgene | CYP2C18 | C0033578 | Prostatic Neoplasms | 1 | CTD_human |
| Tgene | CYP2C18 | C0206726 | gliosarcoma | 1 | CTD_human |
| Tgene | CYP2C18 | C0376358 | Malignant neoplasm of prostate | 1 | CTD_human |
Copyright 2021-Present -The University of Texas Health Science Center at Houston (UTHealth)
Web File Viewing | Emergency Information |Campus Carry|Site Policies