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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:POLR2E-SLC44A4 (FusionGDB2 ID:66611)

Fusion Gene Summary for POLR2E-SLC44A4

check button Fusion gene summary
Fusion gene informationFusion gene name: POLR2E-SLC44A4
Fusion gene ID: 66611
HgeneTgene
Gene symbol

POLR2E

SLC44A4

Gene ID

5434

80736

Gene nameRNA polymerase II subunit Esolute carrier family 44 member 4
SynonymsRPABC1|RPB5|XAP4|hRPB25|hsRPB5C6orf29|CTL4|DFNA72|NG22|TPPT|hTPPT1
Cytomap

19p13.3

6p21.33

Type of geneprotein-codingprotein-coding
DescriptionDNA-directed RNA polymerases I, II, and III subunit RPABC1DNA directed RNA polymerase II 23 kda polypeptideDNA-directed RNA polymerase II 23 kDa polypeptideDNA-directed RNA polymerase II subunit EDNA-directed RNA polymerase subunit RPABC1RNA polymeracholine transporter-like protein 4testicular tissue protein Li 48thiamine pyrophosphate transporterthiamine pyrophosphate transporter 1
Modification date2020031320200313
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000586746, ENST00000215587, 
ENST00000585838, 		ENST00000229729, 
ENST00000544672, ENST00000375562, 
ENST00000465707, ENST00000417894, 
ENST00000550821, ENST00000550401, 
ENST00000492911, ENST00000453831, 
ENST00000546461, ENST00000551168, 
ENST00000495620, ENST00000425238, 
ENST00000548188, ENST00000549663, 
ENST00000469478, ENST00000415517, 
ENST00000547288, ENST00000547493, 
ENST00000463111, ENST00000383379, 
ENST00000547684, ENST00000549677, 
ENST00000497745, ENST00000366281, 
ENST00000442152, ENST00000553147, 
ENST00000553121, ENST00000495181, 
Fusion gene scores* DoF score4 X 4 X 3=4814 X 32 X 11=4928
# samples 427
** MAII scorelog2(4/48*10)=-0.263034405833794
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(27/4928*10)=-4.18997094364407
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: POLR2E [Title/Abstract] AND SLC44A4 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointPOLR2E(1095257)-SLC44A4(31831525), # samples:2
Anticipated loss of major functional domain due to fusion event.POLR2E-SLC44A4 seems lost the major protein functional domain in Hgene partner, which is a cell metabolism gene due to the frame-shifted ORF.
POLR2E-SLC44A4 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
POLR2E-SLC44A4 seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF.
POLR2E-SLC44A4 seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgenePOLR2E

GO:0006366

transcription by RNA polymerase II

9852112

TgeneSLC44A4

GO:0030974

thiamine pyrophosphate transmembrane transport

24379411


check buttonFusion gene breakpoints across POLR2E (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across SLC44A4 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4PRADTCGA-EJ-7315POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
ChimerDB4PRADTCGA-EJ-7315POLR2Echr19

1095257

-SLC44A4chr6

31831525

-


Top

Fusion Gene ORF analysis for POLR2E-SLC44A4

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000586746ENST00000229729POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
Frame-shiftENST00000586746ENST00000544672POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
In-frameENST00000586746ENST00000375562POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000465707POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000417894POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000550821POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000550401POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000492911POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000453831POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000546461POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000551168POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000495620POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000425238POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000548188POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000549663POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000469478POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000415517POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000547288POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000547493POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000463111POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000383379POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000547684POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000549677POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000497745POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000366281POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000442152POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000553147POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000553121POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000586746ENST00000495181POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
In-frameENST00000215587ENST00000229729POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
Frame-shiftENST00000215587ENST00000544672POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
In-frameENST00000215587ENST00000375562POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000465707POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000417894POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000550821POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000550401POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000492911POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000453831POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000546461POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000551168POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000495620POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000425238POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000548188POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000549663POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000469478POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000415517POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000547288POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000547493POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000463111POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000383379POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000547684POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000549677POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000497745POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000366281POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000442152POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000553147POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000553121POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
5CDS-intronENST00000215587ENST00000495181POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-3CDSENST00000585838ENST00000229729POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-3CDSENST00000585838ENST00000544672POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-3CDSENST00000585838ENST00000375562POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000465707POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000417894POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000550821POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000550401POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000492911POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000453831POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000546461POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000551168POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000495620POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000425238POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000548188POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000549663POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000469478POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000415517POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000547288POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000547493POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000463111POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000383379POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000547684POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000549677POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000497745POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000366281POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000442152POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000553147POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000553121POLR2Echr19

1095257

-SLC44A4chr6

31831525

-
intron-intronENST00000585838ENST00000495181POLR2Echr19

1095257

-SLC44A4chr6

31831525

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000586746POLR2Echr191095257-ENST00000229729SLC44A4chr631831525-6539634360108
ENST00000586746POLR2Echr191095257-ENST00000375562SLC44A4chr631831525-6509634360108
ENST00000215587POLR2Echr191095257-ENST00000229729SLC44A4chr631831525-8983415406133
ENST00000215587POLR2Echr191095257-ENST00000375562SLC44A4chr631831525-8953415406133

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000586746ENST00000229729POLR2Echr191095257-SLC44A4chr631831525-0.313528480.6864715
ENST00000586746ENST00000375562POLR2Echr191095257-SLC44A4chr631831525-0.29320710.7067929
ENST00000215587ENST00000229729POLR2Echr191095257-SLC44A4chr631831525-0.25688350.7431165
ENST00000215587ENST00000375562POLR2Echr191095257-SLC44A4chr631831525-0.247402610.7525974

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Fusion Genomic Features for POLR2E-SLC44A4


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for POLR2E-SLC44A4


check button Go to

FGviewer for the breakpoints of chr19:1095257-chr6:31831525

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820660_710628.3333333333334669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003833790211_340711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021251_2520711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021274_3090711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021331_3580711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021380_4550711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021477_5010711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021523_5600711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000038337902156_2290711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021582_5970711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021619_6380711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021660_7100711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000004155170211_340711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021251_2520711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021274_3090711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021331_3580711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021380_4550711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021477_5010711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021523_5600711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000041551702156_2290711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021582_5970711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021619_6380711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021660_7100711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000004178940211_340711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021251_2520711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021274_3090711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021331_3580711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021380_4550711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021477_5010711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021523_5600711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000041789402156_2290711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021582_5970711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021619_6380711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021660_7100711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000004252380211_340711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021251_2520711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021274_3090711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021331_3580711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021380_4550711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021477_5010711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021523_5600711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000042523802156_2290711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021582_5970711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021619_6380711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021660_7100711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000004421520211_340711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021251_2520711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021274_3090711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021331_3580711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021380_4550711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021477_5010711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021523_5600711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000044215202156_2290711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021582_5970711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021619_6380711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021660_7100711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000004538310211_340711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021251_2520711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021274_3090711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021331_3580711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021380_4550711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021477_5010711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021523_5600711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000045383102156_2290711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021582_5970711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021619_6380711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021660_7100711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921619_638594.3333333333334635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921660_710594.3333333333334635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005464610211_340635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021251_2520635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021274_3090635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021331_3580635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021380_4550635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021477_5010635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021523_5600635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000054646102156_2290635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021582_5970635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021619_6380635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021660_7100635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005474930201_340669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020251_2520669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020274_3090669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020331_3580669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020380_4550669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020477_5010669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020523_5600669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000054749302056_2290669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020582_5970669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020619_6380669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020660_7100669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005476840211_340635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021251_2520635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021274_3090635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021331_3580635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021380_4550635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021477_5010635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021523_5600635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000054768402156_2290635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021582_5970635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021619_6380635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021660_7100635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005481880211_340635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021251_2520635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021274_3090635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021331_3580635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021380_4550635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021477_5010635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021523_5600635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000054818802156_2290635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021582_5970635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021619_6380635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021660_7100635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005496630201_340669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020251_2520669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020274_3090669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020331_3580669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020380_4550669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020477_5010669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020523_5600669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000054966302056_2290669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020582_5970669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020619_6380669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020660_7100669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005496770201_340669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020251_2520669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020274_3090669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020331_3580669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020380_4550669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020477_5010669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020523_5600669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000054967702056_2290669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020582_5970669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020619_6380669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020660_7100669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005504010201_340669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020251_2520669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020274_3090669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020331_3580669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020380_4550669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020477_5010669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020523_5600669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000055040102056_2290669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020582_5970669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020619_6380669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020660_7100669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005511680201_340669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020251_2520669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020274_3090669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020331_3580669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020380_4550669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020477_5010669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020523_5600669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000055116802056_2290669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020582_5970669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020619_6380669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020660_7100669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005531210201_340669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020251_2520669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020274_3090669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020331_3580669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020380_4550669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020477_5010669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020523_5600669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000055312102056_2290669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020582_5970669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020619_6380669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020660_7100669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820639_659628.3333333333334669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021230_2500711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021253_2730711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021310_3300711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021359_3790711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000038337902135_550711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021456_4760711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021502_5220711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021561_5810711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021598_6180711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000383379021639_6590711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021230_2500711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021253_2730711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021310_3300711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021359_3790711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000041551702135_550711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021456_4760711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021502_5220711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021561_5810711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021598_6180711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000415517021639_6590711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021230_2500711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021253_2730711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021310_3300711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021359_3790711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000041789402135_550711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021456_4760711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021502_5220711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021561_5810711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021598_6180711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000417894021639_6590711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021230_2500711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021253_2730711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021310_3300711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021359_3790711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000042523802135_550711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021456_4760711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021502_5220711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021561_5810711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021598_6180711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000425238021639_6590711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021230_2500711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021253_2730711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021310_3300711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021359_3790711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000044215202135_550711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021456_4760711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021502_5220711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021561_5810711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021598_6180711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000442152021639_6590711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021230_2500711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021253_2730711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021310_3300711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021359_3790711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000045383102135_550711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021456_4760711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021502_5220711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021561_5810711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021598_6180711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000453831021639_6590711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921598_618594.3333333333334635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921639_659594.3333333333334635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021230_2500635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021253_2730635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021310_3300635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021359_3790635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000054646102135_550635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021456_4760635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021502_5220635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021561_5810635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021598_6180635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000546461021639_6590635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020230_2500669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020253_2730669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020310_3300669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020359_3790669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000054749302035_550669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020456_4760669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020502_5220669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020561_5810669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020598_6180669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547493020639_6590669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021230_2500635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021253_2730635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021310_3300635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021359_3790635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000054768402135_550635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021456_4760635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021502_5220635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021561_5810635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021598_6180635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000547684021639_6590635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021230_2500635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021253_2730635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021310_3300635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021359_3790635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000054818802135_550635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021456_4760635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021502_5220635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021561_5810635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021598_6180635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000548188021639_6590635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020230_2500669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020253_2730669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020310_3300669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020359_3790669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000054966302035_550669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020456_4760669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020502_5220669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020561_5810669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020598_6180669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549663020639_6590669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020230_2500669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020253_2730669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020310_3300669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020359_3790669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000054967702035_550669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020456_4760669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020502_5220669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020561_5810669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020598_6180669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000549677020639_6590669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020230_2500669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020253_2730669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020310_3300669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020359_3790669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000055040102035_550669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020456_4760669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020502_5220669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020561_5810669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020598_6180669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000550401020639_6590669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020230_2500669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020253_2730669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020310_3300669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020359_3790669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000055116802035_550669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020456_4760669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020502_5220669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020561_5810669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020598_6180669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000551168020639_6590669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020230_2500669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020253_2730669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020310_3300669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020359_3790669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000055312102035_550669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020456_4760669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020502_5220669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020561_5810669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020598_6180669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000553121020639_6590669.0TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000022972919211_34670.3333333333334711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921251_252670.3333333333334711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921274_309670.3333333333334711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921331_358670.3333333333334711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921380_455670.3333333333334711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921477_501670.3333333333334711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921523_560670.3333333333334711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000229729192156_229670.3333333333334711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921582_597670.3333333333334711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921619_638670.3333333333334711.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921660_710670.3333333333334711.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000037556218201_34628.3333333333334669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820251_252628.3333333333334669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820274_309628.3333333333334669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820331_358628.3333333333334669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820380_455628.3333333333334669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820477_501628.3333333333334669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820523_560628.3333333333334669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000375562182056_229628.3333333333334669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820582_597628.3333333333334669.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820619_638628.3333333333334669.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST0000054467219211_34594.3333333333334635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921251_252594.3333333333334635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921274_309594.3333333333334635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921331_358594.3333333333334635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921380_455594.3333333333334635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921477_501594.3333333333334635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921523_560594.3333333333334635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000544672192156_229594.3333333333334635.0Topological domainExtracellular
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921582_597594.3333333333334635.0Topological domainCytoplasmic
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921230_250670.3333333333334711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921253_273670.3333333333334711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921310_330670.3333333333334711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921359_379670.3333333333334711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000229729192135_55670.3333333333334711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921456_476670.3333333333334711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921502_522670.3333333333334711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921561_581670.3333333333334711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921598_618670.3333333333334711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000002297291921639_659670.3333333333334711.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820230_250628.3333333333334669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820253_273628.3333333333334669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820310_330628.3333333333334669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820359_379628.3333333333334669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000375562182035_55628.3333333333334669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820456_476628.3333333333334669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820502_522628.3333333333334669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820561_581628.3333333333334669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000003755621820598_618628.3333333333334669.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921230_250594.3333333333334635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921253_273594.3333333333334635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921310_330594.3333333333334635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921359_379594.3333333333334635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST00000544672192135_55594.3333333333334635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921456_476594.3333333333334635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921502_522594.3333333333334635.0TransmembraneHelical
TgeneSLC44A4chr19:1095257chr6:31831525ENST000005446721921561_581594.3333333333334635.0TransmembraneHelical


Top

Fusion Gene Sequence for POLR2E-SLC44A4


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000586746_ENST00000229729_TCGA-EJ-7315_POLR2E_chr19_1095257_-_SLC44A4_chr6_31831525_length(transcript)=653nt_BP=96nt
GGAGAAGGGGTGCGAGCGGCGGCGGCGGCGGAGGCTGCCATGGACGACGAGGAGGAGACGTACCGGCTCTGGAAAATCCGCAAGACCATC
ATGCAGTGGAAGACCTGGAGCGGAACAACGGCTCCCTGGACCGGCCCTACTACATGTCCAAGAGCCTTCTAAAGATTCTGGGCAAGAAGA
ACGAGGCGCCCCCGGACAACAAGAAGAGGAAGAAGTGACAGCTCCGGCCCTGATCCAGGACTGCACCCCACCCCCACCGTCCAGCCATCC
AACCTCACTTCGCCTTACAGGTCTCCATTTTGTGGTAAAAAAAGGTTTTAGGCCAGGCGCCGTGGCTCACGCCTGTAATCCAACACTTTG
AGAGGCTGAGGCGGGCGGATCACCTGAGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCTCCGTCTCTATTAAAAATACAAA
AATTAGCCGAGAGTGGTGGCATGCACCTGTCATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTT
GCAGTGAGCCGAGATCGCGCCACTGCACTCCAACCTGGGTGACAGACTCTGTCTCCAAAACAAAACAAACAAACAAAAAGATTTTATTAA

>In-frame_ENST00000586746_ENST00000229729_TCGA-EJ-7315_POLR2E_chr19_1095257_-_SLC44A4_chr6_31831525_length(amino acids)=108AA_start in transcript=34_stop in transcript=360
MPWTTRRRRTGSGKSARPSCSGRPGAEQRLPGPALLHVQEPSKDSGQEERGAPGQQEEEEVTAPALIQDCTPPPPSSHPTSLRLTGLHFV

--------------------------------------------------------------
>In-frame_ENST00000586746_ENST00000375562_TCGA-EJ-7315_POLR2E_chr19_1095257_-_SLC44A4_chr6_31831525_length(transcript)=650nt_BP=96nt
GGAGAAGGGGTGCGAGCGGCGGCGGCGGCGGAGGCTGCCATGGACGACGAGGAGGAGACGTACCGGCTCTGGAAAATCCGCAAGACCATC
ATGCAGTGGAAGACCTGGAGCGGAACAACGGCTCCCTGGACCGGCCCTACTACATGTCCAAGAGCCTTCTAAAGATTCTGGGCAAGAAGA
ACGAGGCGCCCCCGGACAACAAGAAGAGGAAGAAGTGACAGCTCCGGCCCTGATCCAGGACTGCACCCCACCCCCACCGTCCAGCCATCC
AACCTCACTTCGCCTTACAGGTCTCCATTTTGTGGTAAAAAAAGGTTTTAGGCCAGGCGCCGTGGCTCACGCCTGTAATCCAACACTTTG
AGAGGCTGAGGCGGGCGGATCACCTGAGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCTCCGTCTCTATTAAAAATACAAA
AATTAGCCGAGAGTGGTGGCATGCACCTGTCATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTT
GCAGTGAGCCGAGATCGCGCCACTGCACTCCAACCTGGGTGACAGACTCTGTCTCCAAAACAAAACAAACAAACAAAAAGATTTTATTAA

>In-frame_ENST00000586746_ENST00000375562_TCGA-EJ-7315_POLR2E_chr19_1095257_-_SLC44A4_chr6_31831525_length(amino acids)=108AA_start in transcript=34_stop in transcript=360
MPWTTRRRRTGSGKSARPSCSGRPGAEQRLPGPALLHVQEPSKDSGQEERGAPGQQEEEEVTAPALIQDCTPPPPSSHPTSLRLTGLHFV

--------------------------------------------------------------
>In-frame_ENST00000215587_ENST00000229729_TCGA-EJ-7315_POLR2E_chr19_1095257_-_SLC44A4_chr6_31831525_length(transcript)=898nt_BP=341nt
GGGAGTTGAACGGAAACTACAACTCCCGAGAGGCTGTGCGGCCAAAGACACACGAGAACTACGGAGGCGAGAGACTCGCTCAGCCAACTG
CCGCTCTCGTAAGGCTCGGGCTGCCCTTGGCGCTGCCGATCCGAGACGTTGCTGCATTCAGGCATTCGCCGACGACAGACCAGCGCGGGG
CGGGGTTAGGCGGAGGGGGCCTGATTCGGATTCGGCGCAGGCGCAGTCCGCGCGGGTTCTCGCGCGGAGAAGGGGTGCGAGCGGCGGCGG
CGGCGGAGGCTGCCATGGACGACGAGGAGGAGACGTACCGGCTCTGGAAAATCCGCAAGACCATCATGCAGTGGAAGACCTGGAGCGGAA
CAACGGCTCCCTGGACCGGCCCTACTACATGTCCAAGAGCCTTCTAAAGATTCTGGGCAAGAAGAACGAGGCGCCCCCGGACAACAAGAA
GAGGAAGAAGTGACAGCTCCGGCCCTGATCCAGGACTGCACCCCACCCCCACCGTCCAGCCATCCAACCTCACTTCGCCTTACAGGTCTC
CATTTTGTGGTAAAAAAAGGTTTTAGGCCAGGCGCCGTGGCTCACGCCTGTAATCCAACACTTTGAGAGGCTGAGGCGGGCGGATCACCT
GAGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCTCCGTCTCTATTAAAAATACAAAAATTAGCCGAGAGTGGTGGCATGCA
CCTGTCATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGCGCCACTG

>In-frame_ENST00000215587_ENST00000229729_TCGA-EJ-7315_POLR2E_chr19_1095257_-_SLC44A4_chr6_31831525_length(amino acids)=133AA_start in transcript=5_stop in transcript=406
MNGNYNSREAVRPKTHENYGGERLAQPTAALVRLGLPLALPIRDVAAFRHSPTTDQRGAGLGGGGLIRIRRRRSPRGFSRGEGVRAAAAA

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>In-frame_ENST00000215587_ENST00000375562_TCGA-EJ-7315_POLR2E_chr19_1095257_-_SLC44A4_chr6_31831525_length(transcript)=895nt_BP=341nt
GGGAGTTGAACGGAAACTACAACTCCCGAGAGGCTGTGCGGCCAAAGACACACGAGAACTACGGAGGCGAGAGACTCGCTCAGCCAACTG
CCGCTCTCGTAAGGCTCGGGCTGCCCTTGGCGCTGCCGATCCGAGACGTTGCTGCATTCAGGCATTCGCCGACGACAGACCAGCGCGGGG
CGGGGTTAGGCGGAGGGGGCCTGATTCGGATTCGGCGCAGGCGCAGTCCGCGCGGGTTCTCGCGCGGAGAAGGGGTGCGAGCGGCGGCGG
CGGCGGAGGCTGCCATGGACGACGAGGAGGAGACGTACCGGCTCTGGAAAATCCGCAAGACCATCATGCAGTGGAAGACCTGGAGCGGAA
CAACGGCTCCCTGGACCGGCCCTACTACATGTCCAAGAGCCTTCTAAAGATTCTGGGCAAGAAGAACGAGGCGCCCCCGGACAACAAGAA
GAGGAAGAAGTGACAGCTCCGGCCCTGATCCAGGACTGCACCCCACCCCCACCGTCCAGCCATCCAACCTCACTTCGCCTTACAGGTCTC
CATTTTGTGGTAAAAAAAGGTTTTAGGCCAGGCGCCGTGGCTCACGCCTGTAATCCAACACTTTGAGAGGCTGAGGCGGGCGGATCACCT
GAGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCTCCGTCTCTATTAAAAATACAAAAATTAGCCGAGAGTGGTGGCATGCA
CCTGTCATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGCGCCACTG

>In-frame_ENST00000215587_ENST00000375562_TCGA-EJ-7315_POLR2E_chr19_1095257_-_SLC44A4_chr6_31831525_length(amino acids)=133AA_start in transcript=5_stop in transcript=406
MNGNYNSREAVRPKTHENYGGERLAQPTAALVRLGLPLALPIRDVAAFRHSPTTDQRGAGLGGGGLIRIRRRRSPRGFSRGEGVRAAAAA

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Fusion Gene PPI Analysis for POLR2E-SLC44A4


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for POLR2E-SLC44A4


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for POLR2E-SLC44A4


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgeneSLC44A4C3711374Nonsyndromic Deafness1CLINGEN
TgeneSLC44A4C4539886DEAFNESS, AUTOSOMAL DOMINANT 721UNIPROT