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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:POU2F1-CNTNAP3 (FusionGDB2 ID:66814)

Fusion Gene Summary for POU2F1-CNTNAP3

check button Fusion gene summary
Fusion gene informationFusion gene name: POU2F1-CNTNAP3
Fusion gene ID: 66814
HgeneTgene
Gene symbol

POU2F1

CNTNAP3

Gene ID

5451

79937

Gene namePOU class 2 homeobox 1contactin associated protein family member 3
SynonymsOCT1|OTF1|oct-1BCASPR3|CNTNAP3A
Cytomap

1q24.2

9p12

Type of geneprotein-codingprotein-coding
DescriptionPOU domain, class 2, transcription factor 1NF-A1OTF-1Octamer-binding transcription factor-1POU class 2 homeobox 1 isoform Oct-1Roct-1octamer-binding protein 1octamer-binding transcription factor 1contactin-associated protein-like 3cell recognition molecule Caspr3contactin associated protein like 3
Modification date2020032020200329
UniProtAcc.

Q96NU0

Ensembl transtripts involved in fusion geneENST00000367866, ENST00000452019, 
ENST00000429375, ENST00000367865, 
ENST00000541643, ENST00000420254, 
ENST00000367862, 		ENST00000297668, 
ENST00000377656, ENST00000358144, 
ENST00000323947, ENST00000377659, 
ENST00000377653, 
Fusion gene scores* DoF score15 X 7 X 11=11553 X 3 X 3=27
# samples 173
** MAII scorelog2(17/1155*10)=-2.76428620016572
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(3/27*10)=0.15200309344505
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: POU2F1 [Title/Abstract] AND CNTNAP3 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointPOU2F1(167382351)-CNTNAP3(39118256), # samples:1
Anticipated loss of major functional domain due to fusion event.POU2F1-CNTNAP3 seems lost the major protein functional domain in Hgene partner, which is a transcription factor due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgenePOU2F1

GO:0045892

negative regulation of transcription, DNA-templated

11891224|11997177

HgenePOU2F1

GO:0045944

positive regulation of transcription by RNA polymerase II

15252056


check buttonFusion gene breakpoints across POU2F1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across CNTNAP3 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4HNSCTCGA-CV-7418POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-


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Fusion Gene ORF analysis for POU2F1-CNTNAP3

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000367866ENST00000297668POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000367866ENST00000377656POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000367866ENST00000358144POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000367866ENST00000323947POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
Frame-shiftENST00000367866ENST00000377659POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
5CDS-intronENST00000367866ENST00000377653POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
intron-3CDSENST00000452019ENST00000297668POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
intron-3CDSENST00000452019ENST00000377656POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
intron-3CDSENST00000452019ENST00000358144POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
intron-3CDSENST00000452019ENST00000323947POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
intron-3CDSENST00000452019ENST00000377659POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
intron-intronENST00000452019ENST00000377653POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000429375ENST00000297668POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000429375ENST00000377656POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000429375ENST00000358144POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000429375ENST00000323947POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
Frame-shiftENST00000429375ENST00000377659POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
5CDS-intronENST00000429375ENST00000377653POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
3UTR-3CDSENST00000367865ENST00000297668POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
3UTR-3CDSENST00000367865ENST00000377656POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
3UTR-3CDSENST00000367865ENST00000358144POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
3UTR-3CDSENST00000367865ENST00000323947POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
3UTR-3CDSENST00000367865ENST00000377659POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
3UTR-intronENST00000367865ENST00000377653POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000541643ENST00000297668POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000541643ENST00000377656POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000541643ENST00000358144POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000541643ENST00000323947POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
Frame-shiftENST00000541643ENST00000377659POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
5CDS-intronENST00000541643ENST00000377653POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000420254ENST00000297668POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000420254ENST00000377656POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000420254ENST00000358144POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000420254ENST00000323947POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
Frame-shiftENST00000420254ENST00000377659POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
5CDS-intronENST00000420254ENST00000377653POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000367862ENST00000297668POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000367862ENST00000377656POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000367862ENST00000358144POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
In-frameENST00000367862ENST00000323947POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
Frame-shiftENST00000367862ENST00000377659POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-
5CDS-intronENST00000367862ENST00000377653POU2F1chr1

167382351

+CNTNAP3chr9

39118256

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000367866POU2F1chr1167382351+ENST00000297668CNTNAP3chr939118256-496920595138451264
ENST00000367866POU2F1chr1167382351+ENST00000377656CNTNAP3chr939118256-375920595136051184
ENST00000367866POU2F1chr1167382351+ENST00000358144CNTNAP3chr939118256-507220595133621103
ENST00000367866POU2F1chr1167382351+ENST00000323947CNTNAP3chr939118256-23962059512219722
ENST00000429375POU2F1chr1167382351+ENST00000297668CNTNAP3chr939118256-47181808735941195
ENST00000429375POU2F1chr1167382351+ENST00000377656CNTNAP3chr939118256-35081808733541115
ENST00000429375POU2F1chr1167382351+ENST00000358144CNTNAP3chr939118256-48211808731111034
ENST00000429375POU2F1chr1167382351+ENST00000323947CNTNAP3chr939118256-2145180871968653
ENST00000541643POU2F1chr1167382351+ENST00000297668CNTNAP3chr939118256-4993208316238691235
ENST00000541643POU2F1chr1167382351+ENST00000377656CNTNAP3chr939118256-3783208316236291155
ENST00000541643POU2F1chr1167382351+ENST00000358144CNTNAP3chr939118256-5096208316233861074
ENST00000541643POU2F1chr1167382351+ENST00000323947CNTNAP3chr939118256-242020831622243693
ENST00000420254POU2F1chr1167382351+ENST00000297668CNTNAP3chr939118256-4993208316238691235
ENST00000420254POU2F1chr1167382351+ENST00000377656CNTNAP3chr939118256-3783208316236291155
ENST00000420254POU2F1chr1167382351+ENST00000358144CNTNAP3chr939118256-5096208316233861074
ENST00000420254POU2F1chr1167382351+ENST00000323947CNTNAP3chr939118256-242020831622243693
ENST00000367862POU2F1chr1167382351+ENST00000297668CNTNAP3chr939118256-5102219217839781266
ENST00000367862POU2F1chr1167382351+ENST00000377656CNTNAP3chr939118256-3892219217837381186
ENST00000367862POU2F1chr1167382351+ENST00000358144CNTNAP3chr939118256-5205219217834951105
ENST00000367862POU2F1chr1167382351+ENST00000323947CNTNAP3chr939118256-252921921782352724

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000367866ENST00000297668POU2F1chr1167382351+CNTNAP3chr939118256-0.0025419840.99745804
ENST00000367866ENST00000377656POU2F1chr1167382351+CNTNAP3chr939118256-0.0063648740.9936352
ENST00000367866ENST00000358144POU2F1chr1167382351+CNTNAP3chr939118256-0.0014776020.99852246
ENST00000367866ENST00000323947POU2F1chr1167382351+CNTNAP3chr939118256-0.047736740.95226324
ENST00000429375ENST00000297668POU2F1chr1167382351+CNTNAP3chr939118256-0.002226460.99777347
ENST00000429375ENST00000377656POU2F1chr1167382351+CNTNAP3chr939118256-0.0059212290.99407876
ENST00000429375ENST00000358144POU2F1chr1167382351+CNTNAP3chr939118256-0.0016027490.9983973
ENST00000429375ENST00000323947POU2F1chr1167382351+CNTNAP3chr939118256-0.059049860.9409501
ENST00000541643ENST00000297668POU2F1chr1167382351+CNTNAP3chr939118256-0.0030995270.99690044
ENST00000541643ENST00000377656POU2F1chr1167382351+CNTNAP3chr939118256-0.0076707870.9923292
ENST00000541643ENST00000358144POU2F1chr1167382351+CNTNAP3chr939118256-0.0018217490.99817824
ENST00000541643ENST00000323947POU2F1chr1167382351+CNTNAP3chr939118256-0.058692330.94130766
ENST00000420254ENST00000297668POU2F1chr1167382351+CNTNAP3chr939118256-0.0030995270.99690044
ENST00000420254ENST00000377656POU2F1chr1167382351+CNTNAP3chr939118256-0.0076707870.9923292
ENST00000420254ENST00000358144POU2F1chr1167382351+CNTNAP3chr939118256-0.0018217490.99817824
ENST00000420254ENST00000323947POU2F1chr1167382351+CNTNAP3chr939118256-0.058692330.94130766
ENST00000367862ENST00000297668POU2F1chr1167382351+CNTNAP3chr939118256-0.0028992940.99710065
ENST00000367862ENST00000377656POU2F1chr1167382351+CNTNAP3chr939118256-0.0068677210.9931323
ENST00000367862ENST00000358144POU2F1chr1167382351+CNTNAP3chr939118256-0.0017617820.9982382
ENST00000367862ENST00000323947POU2F1chr1167382351+CNTNAP3chr939118256-0.0397009660.9602991

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Fusion Genomic Features for POU2F1-CNTNAP3


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for POU2F1-CNTNAP3


check button Go to

FGviewer for the breakpoints of chr1:167382351-chr9:39118256

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.CNTNAP3

Q96NU0

FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgenePOU2F1chr1:167382351chr9:39118256ENST00000367862+1516379_438652.3333333333334756.0DNA bindingHomeobox
HgenePOU2F1chr1:167382351chr9:39118256ENST00000420254+1617379_438640.3333333333334654.0DNA bindingHomeobox
HgenePOU2F1chr1:167382351chr9:39118256ENST00000429375+1415379_438600.3333333333334704.0DNA bindingHomeobox
HgenePOU2F1chr1:167382351chr9:39118256ENST00000541643+1617379_438640.3333333333334744.0DNA bindingHomeobox
HgenePOU2F1chr1:167382351chr9:39118256ENST00000367862+1516280_354652.3333333333334756.0DomainPOU-specific
HgenePOU2F1chr1:167382351chr9:39118256ENST00000420254+1617280_354640.3333333333334654.0DomainPOU-specific
HgenePOU2F1chr1:167382351chr9:39118256ENST00000429375+1415280_354600.3333333333334704.0DomainPOU-specific
HgenePOU2F1chr1:167382351chr9:39118256ENST00000541643+1617280_354640.3333333333334744.0DomainPOU-specific
TgeneCNTNAP3chr1:167382351chr9:39118256ENST0000029766812241015_1203693.33333333333341289.0DomainLaminin G-like 4
TgeneCNTNAP3chr1:167382351chr9:39118256ENST000002976681224793_958693.33333333333341289.0DomainLaminin G-like 3
TgeneCNTNAP3chr1:167382351chr9:39118256ENST000002976681224962_996693.33333333333341289.0DomainEGF-like 2
TgeneCNTNAP3chr1:167382351chr9:39118256ENST0000029766812241267_1288693.33333333333341289.0Topological domainCytoplasmic
TgeneCNTNAP3chr1:167382351chr9:39118256ENST0000029766812241246_1266693.33333333333341289.0TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneCNTNAP3chr1:167382351chr9:39118256ENST00000297668122442_48693.33333333333341289.0Compositional biasNote=Poly-Ser
TgeneCNTNAP3chr1:167382351chr9:39118256ENST000002976681224183_364693.33333333333341289.0DomainLaminin G-like 1
TgeneCNTNAP3chr1:167382351chr9:39118256ENST000002976681224370_545693.33333333333341289.0DomainLaminin G-like 2
TgeneCNTNAP3chr1:167382351chr9:39118256ENST000002976681224551_583693.33333333333341289.0DomainEGF-like 1
TgeneCNTNAP3chr1:167382351chr9:39118256ENST000002976681224584_792693.33333333333341289.0DomainFibrinogen C-terminal
TgeneCNTNAP3chr1:167382351chr9:39118256ENST00000297668122426_1245693.33333333333341289.0Topological domainExtracellular


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Fusion Gene Sequence for POU2F1-CNTNAP3


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000367866_ENST00000297668_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=4969nt_BP=2059nt
GGGAGGGGGGAGGGGAGCCAGAGCGAGGGAGGGTTTATCGACCGGGCGATTTTGGTTAAAATATTCAAAATGGCGGACGGAGGAGCAGCG
AGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTCAAGAATGAACAATCCGTCAGAAACCAGTAAACCATCTATGGAGAGT
GGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGTAGGAGGAGCAATCTCAACAGCCCAGGCG
CAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGCTCAGTCTTTAAATGTACAGTCTAAATCT
AATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGCAGCCATTCCCCAGACCCAGCTTATGCTA
GCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACAGTTACTACTCCAGCAGGCACAGGCACAGGCACAGCTGCTGGCT
GCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAGTGCTGCTGGAGCCACCATCTCCGCCTCTGCTGCCACGCCCATGACGCAGATC
CCCCTGTCTCAGCCCATACAGATCGCACAGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAATCTCAACCTGCAACAGTTTGTGTTG
GTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAGGGTCTCCTGCAAGCGCAAAATCTT
CTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACCTCCCAGCCAGCAACCCCAACACGC
ACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACACCAAAGCGAATTGATACTCCCAGCTTGGAGGAGCCCAGTGAC
CTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAGGGTGATGTTGGGCTCGCTATGGGG
AAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTTAAGAACATGTGCAAGTTGAAGCCA
CTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGTGCCCTGAATTCTCCAGGAATTGAG
GGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAGAGTTTCTTGGAGAATCAAAAGCCT
ACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAAAGAGGTGATTCGTGTTTGGTTCTGTAACCGCCGCCAGAAAGAA
AAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGCCCAACTTCACTGGTGGCGACCACA
CCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGTGCTGCTGTGACGAATCTTTCAGTT
ACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCCTCAGCAGTCACGTCCCCCTCTCTG
AGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTGAGACCAGCACAACACAGACCACCTCCACTCCTTTGTCC
TCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCAAACAGCAGCAGCTGCTGCCCTTCAAGGAGCTGCACAGTTGCCA
GCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCACAGTTTGCGGCTGGAGGTGCCTTA
CTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTGGCAACTATTCAAGATGGAACCCCA
CTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGGAGGTTCTCTGCCTGATGCTCAAAAGTGTACTTGTGGATTAGAG
GGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCGGAATGAATGGACTAGTGACACAATAGTCCTTTCCCAAAAGGAG
CACCTGCCAGTCACTCAGATTGTGATGACAGACGCAGGCCGACCACATTCCGAAGCAGCTTATACACTGGGGCCACTGCTCTGCCGCGGA
GATCAGTCATTCTGGAATTCAGCTTCCTTCAACACTGAGACTTCATACCTTCATTTCCCTGCTTTCCACGGAGAACTCACTGCTGACGTG
TGCTTCTTTTTTAAGACCACAGTTTCCTCCGGGGTGTTTATGGAGAACCTGGGGATCACAGATTTCATCAGGATTGAGCTGCGTGCTCCC
ACAGAAGTGACCTTTTCCTTCGATGTGGGGAATGGACCTTGTGAGGTCACGGTGCAGTCACCCACTCCCTTTAATGACAATCAGTGGCAC
CACGTGAGGGCAGAGAGAAATGTTAAAGGAGCGTCTCTTCAAGTTGATCAGCTTCCTCAGAAGATGCAGCCTGCCCCTGCTGATGGGCAC
GTTCGTTTACAGCTCAACAGCCAGCTCTTCATTGGTGGAACGGCCACCAGACAGAGAGGCTTTCTAGGATGCATTCGGTCTCTGCAGTTG
AACGGGGTGGCCCTGGATCTGGAAGAAAGAGCCACAGTGACGCCAGGAGTGGAGCCAGGGTGTGCAGGACACTGCAGCACCTATGGACAC
TTGTGTCGCAATGGAGGGAGATGCAGAGAGAAACGCAGGGGGGTCACCTGTGACTGTGCCTTCTCAGCCTATGATGGGCCGTTCTGCTCC
AATGAGATTTCCGCATATTTTGCAACTGGCTCCTCAATGACATACCATTTTCAAGAACATTACACTTTAAGTGAAAACTCCAGCTCTCTC
GTTTCTTCATTACACAGAGATGTAACATTGACCAGAGAAATGATCACACTGAGCTTCCGAACCACACGAACTCCGAGCTTATTGCTGTAT
GTGAGCTCTTTCTATGAGGAATACCTTTCAGTTATCCTCGCCAACAATGGAAGTTTGCAGATTAGGTACAAGCTAGATAGACATCAAAAT
CCTGATGCATTTACCTTTGATTTTAAAAACATGGCTGATGGGCAACTTCACCAAGTGAAGATTAACAGAGAAGAAGCTGTGGTCATGGTA
GAGGTTAACCAGAGCACAAAGAAACAAGTCATCTTGTCCTCAGGGACAGAATTCAACGCCGTCAAATCTCTCATATTGGGAAAGGTTTTA
GAGGCTGCCGGCGCGGACCCGGACACAAGGCGGGCGGCGACTAGTGGCTTCACTGGCTGCCTCTCGGCGGTGCGCTTCGGCCGCGCTGCT
CCCCTGAAGGCGGCGCTGCGCCCCAGCGGCCCCTCCCGGGTCACCGTCCGCGGCCACGTGGCCCCTATGGCCCGCTGCGCAGCGGGGGCG
GCGTCCGGCTCCCCGGCGCGGGAACTGGCTCCCCGACTCGCGGGGGGCGCAGGTCGTTCTGGACCAGCGGATGAGGGAGAGCCCTTGGTT
AATGCAGACAGAAGAGACTCTGCTGTCATCGGAGGTGTGATAGCAGTGGTGATATTTATTTTGCTTTGCATCACTGCCATAGCCATACGC
ATCTATCAACAGAGAAAGTTACGCAAAGAAAATGAGTCAAAAGTCTCAAAAAAAGAAGAGTGCTAGGACAGCTCTAAACAGTGAGCTCGA
TGTGCAAAACGCAGTCCATGAAAACCAGAAAGAGCGAGTCTTCTGATTGGCAGCTGTGGCTGTCTCTATCATCGTGACTGTGGACTTCCC
TGCTGTTGCCATCAGGGTGCACACAAGCAGGTGCAGTGCTGTCACCTGGCTGAAGACCTGCAGCCTCGGAGCCTCTGGGAGGTCCCTTTC
TCCCTCGGTGAAACACAGTCCTCCACATCAATTTCCAAACAATGAATTAGGTATGGCCATTCATCACTGTTCAGTAGTTTCCCCGTCCAA
AGGCTCTCTTCCAAAACTGCAGTTTGATCTGTGTTAATAATTGTGGGGTTTTAGATGAGAAAATGGCTATAAAGCTGTGGCCCTACTTTA
TTTTTTAAAAATGACAGAACTTTTGTTCAGATGTAAAAGACAAAATTGCACTTTAATGTTTTTTGTTACTTGAAAACATATCTGGGATCC
CTTTTTTTGGTCCTCTGCTGATATTTATAAAACAAGAAATGCTTCTTGGACTACCTTCACTGGCATTTCCATAGTCCTGGAATCCAGAGC
CAAGTGGCCTATCTAAAATTCACAGCCCTTTTATTCTCCTGTGTGATGGTTAATACAACACAGTTGAAGCCTGGAAACACTACCATTATT
TTTGGTGTATTGCTTTTTCTAATTGACTGTTTTTAATGATTTTGATACATTTTAATGTTGAAATTAATATTGAATGTTAGCTATGAAATT
TTAGTATTGAATTTTATAATGGAACAGAACATTGGTAGGTAACAAGATGCAAGAGGATGTCAATACAAGATTGTCTGCCTGTTTTTCTTT
GTAATTTGTAATTACAGTTTTTGTAACTTGTGATTATGTTTTTAACTAAATTTACCACCAGATACAAACAATACTTCTTACACAGAGTTA
TCCTTTATTTATATCATTAAGACGTGAATGAAACATCATCCTAACTTACTTCCCCAAGATATTGAGAGGTCATATCTGTTTTTCTTTATC
ATTCATTTCTTTTTCTAAAAGTTGTTACTGATATGCTTTTGATTTCCTATGACTCTATTATGTTGTACAGAACATCTTTTCAATTTATTA

>In-frame_ENST00000367866_ENST00000297668_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=1264AA_start in transcript=51_stop in transcript=3845
MVKIFKMADGGAASQDESSAAAAAAADSRMNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSL
QAAAQSLNVQSKSNEESGDSQQPSQPSQQPSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGA
TISASAATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQP
SITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEA
LNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKE
VIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVIST
APPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPS
LMAPSQFAAGGALLSLNPGTLSGALSPALMSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRN
EWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENL
GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATR
QRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHF
QEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLH
QVKINREEAVVMVEVNQSTKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVR
GHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPADEGEPLVNADRRDSAVIGGVIAVVIFILLCITAIAIRIYQQRKLRKENESKVSK

--------------------------------------------------------------
>In-frame_ENST00000367866_ENST00000377656_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=3759nt_BP=2059nt
GGGAGGGGGGAGGGGAGCCAGAGCGAGGGAGGGTTTATCGACCGGGCGATTTTGGTTAAAATATTCAAAATGGCGGACGGAGGAGCAGCG
AGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTCAAGAATGAACAATCCGTCAGAAACCAGTAAACCATCTATGGAGAGT
GGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGTAGGAGGAGCAATCTCAACAGCCCAGGCG
CAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGCTCAGTCTTTAAATGTACAGTCTAAATCT
AATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGCAGCCATTCCCCAGACCCAGCTTATGCTA
GCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACAGTTACTACTCCAGCAGGCACAGGCACAGGCACAGCTGCTGGCT
GCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAGTGCTGCTGGAGCCACCATCTCCGCCTCTGCTGCCACGCCCATGACGCAGATC
CCCCTGTCTCAGCCCATACAGATCGCACAGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAATCTCAACCTGCAACAGTTTGTGTTG
GTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAGGGTCTCCTGCAAGCGCAAAATCTT
CTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACCTCCCAGCCAGCAACCCCAACACGC
ACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACACCAAAGCGAATTGATACTCCCAGCTTGGAGGAGCCCAGTGAC
CTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAGGGTGATGTTGGGCTCGCTATGGGG
AAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTTAAGAACATGTGCAAGTTGAAGCCA
CTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGTGCCCTGAATTCTCCAGGAATTGAG
GGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAGAGTTTCTTGGAGAATCAAAAGCCT
ACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAAAGAGGTGATTCGTGTTTGGTTCTGTAACCGCCGCCAGAAAGAA
AAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGCCCAACTTCACTGGTGGCGACCACA
CCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGTGCTGCTGTGACGAATCTTTCAGTT
ACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCCTCAGCAGTCACGTCCCCCTCTCTG
AGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTGAGACCAGCACAACACAGACCACCTCCACTCCTTTGTCC
TCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCAAACAGCAGCAGCTGCTGCCCTTCAAGGAGCTGCACAGTTGCCA
GCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCACAGTTTGCGGCTGGAGGTGCCTTA
CTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTGGCAACTATTCAAGATGGAACCCCA
CTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGGAGGTTCTCTGCCTGATGCTCAAAAGTGTACTTGTGGATTAGAG
GGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCGGAATGAATGGACTAGTGACACAATAGTCCTTTCCCAAAAGGAG
CACCTGCCAGTCACTCAGATTGTGATGACAGACGCAGGCCGACCACATTCCGAAGCAGCTTATACACTGGGGCCACTGCTCTGCCGCGGA
GATCAGTCATTCTGGAATTCAGCTTCCTTCAACACTGAGACTTCATACCTTCATTTCCCTGCTTTCCACGGAGAACTCACTGCTGACGTG
TGCTTCTTTTTTAAGACCACAGTTTCCTCCGGGGTGTTTATGGAGAACCTGGGGATCACAGATTTCATCAGGATTGAGCTGCGTGCTCCC
ACAGAAGTGACCTTTTCCTTCGATGTGGGGAATGGACCTTGTGAGGTCACGGTGCAGTCACCCACTCCCTTTAATGACAATCAGTGGCAC
CACGTGAGGGCAGAGAGAAATGTTAAAGGAGCGTCTCTTCAAGTTGATCAGCTTCCTCAGAAGATGCAGCCTGCCCCTGCTGATGGGCAC
GTTCGTTTACAGCTCAACAGCCAGCTCTTCATTGAGATTTCCGCATATTTTGCAACTGGCTCCTCAATGACATACCATTTTCAAGAACAT
TACACTTTAAGTGAAAACTCCAGCTCTCTCGTTTCTTCATTACACAGAGATGTAACATTGACCAGAGAAATGATCACACTGAGCTTCCGA
ACCACACGAACTCCGAGCTTATTGCTGTATGTGAGCTCTTTCTATGAGGAATACCTTTCAGTTATCCTCGCCAACAATGGAAGTTTGCAG
ATTAGGTACAAGCTAGATAGACATCAAAATCCTGATGCATTTACCTTTGATTTTAAAAACATGGCTGATGGGCAACTTCACCAAGTGAAG
ATTAACAGAGAAGAAGCTGTGGTCATGGTAGAGGTTAACCAGAGCACAAAGAAACAAGTCATCTTGTCCTCAGGGACAGAATTCAACGCC
GTCAAATCTCTCATATTGGGAAAGGTTTTAGAGGCTGCCGGCGCGGACCCGGACACAAGGCGGGCGGCGACTAGTGGCTTCACTGGCTGC
CTCTCGGCGGTGCGCTTCGGCCGCGCTGCTCCCCTGAAGGCGGCGCTGCGCCCCAGCGGCCCCTCCCGGGTCACCGTCCGCGGCCACGTG
GCCCCTATGGCCCGCTGCGCAGCGGGGGCGGCGTCCGGCTCCCCGGCGCGGGAACTGGCTCCCCGACTCGCGGGGGGCGCAGGTCGTTCT
GGACCAGCGGATGAGGGAGAGCCCTTGGTTAATGCAGACAGAAGAGACTCTGCTGTCATCGGAGGTGTGATAGCAGTGGTGATATTTATT
TTGCTTTGCATCACTGCCATAGCCATACGCATCTATCAACAGAGAAAGTTACGCAAAGAAAATGAGTCAAAAGTCTCAAAAAAAGAAGAG
TGCTAGGACAGCTCTAAACAGTGAGCTCGATGTGCAAAACGCAGTCCATGAAAACCAGAAAGAGCGAGTCTTCTGATTGGCAGCTGTGGC

>In-frame_ENST00000367866_ENST00000377656_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=1184AA_start in transcript=51_stop in transcript=3605
MVKIFKMADGGAASQDESSAAAAAAADSRMNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSL
QAAAQSLNVQSKSNEESGDSQQPSQPSQQPSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGA
TISASAATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQP
SITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEA
LNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKE
VIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVIST
APPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPS
LMAPSQFAAGGALLSLNPGTLSGALSPALMSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRN
EWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENL
GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIEISAYF
ATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFD
FKNMADGQLHQVKINREEAVVMVEVNQSTKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALR
PSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPADEGEPLVNADRRDSAVIGGVIAVVIFILLCITAIAIRIYQQRKL

--------------------------------------------------------------
>In-frame_ENST00000367866_ENST00000358144_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=5072nt_BP=2059nt
GGGAGGGGGGAGGGGAGCCAGAGCGAGGGAGGGTTTATCGACCGGGCGATTTTGGTTAAAATATTCAAAATGGCGGACGGAGGAGCAGCG
AGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTCAAGAATGAACAATCCGTCAGAAACCAGTAAACCATCTATGGAGAGT
GGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGTAGGAGGAGCAATCTCAACAGCCCAGGCG
CAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGCTCAGTCTTTAAATGTACAGTCTAAATCT
AATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGCAGCCATTCCCCAGACCCAGCTTATGCTA
GCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACAGTTACTACTCCAGCAGGCACAGGCACAGGCACAGCTGCTGGCT
GCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAGTGCTGCTGGAGCCACCATCTCCGCCTCTGCTGCCACGCCCATGACGCAGATC
CCCCTGTCTCAGCCCATACAGATCGCACAGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAATCTCAACCTGCAACAGTTTGTGTTG
GTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAGGGTCTCCTGCAAGCGCAAAATCTT
CTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACCTCCCAGCCAGCAACCCCAACACGC
ACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACACCAAAGCGAATTGATACTCCCAGCTTGGAGGAGCCCAGTGAC
CTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAGGGTGATGTTGGGCTCGCTATGGGG
AAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTTAAGAACATGTGCAAGTTGAAGCCA
CTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGTGCCCTGAATTCTCCAGGAATTGAG
GGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAGAGTTTCTTGGAGAATCAAAAGCCT
ACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAAAGAGGTGATTCGTGTTTGGTTCTGTAACCGCCGCCAGAAAGAA
AAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGCCCAACTTCACTGGTGGCGACCACA
CCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGTGCTGCTGTGACGAATCTTTCAGTT
ACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCCTCAGCAGTCACGTCCCCCTCTCTG
AGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTGAGACCAGCACAACACAGACCACCTCCACTCCTTTGTCC
TCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCAAACAGCAGCAGCTGCTGCCCTTCAAGGAGCTGCACAGTTGCCA
GCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCACAGTTTGCGGCTGGAGGTGCCTTA
CTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTGGCAACTATTCAAGATGGAACCCCA
CTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGGAGGTTCTCTGCCTGATGCTCAAAAGTGTACTTGTGGATTAGAG
GGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCGGAATGAATGGACTAGTGACACAATAGTCCTTTCCCAAAAGGAG
CACCTGCCAGTCACTCAGATTGTGATGACAGACGCAGGCCGACCACATTCCGAAGCAGCTTATACACTGGGGCCACTGCTCTGCCGCGGA
GATCAGTCATTCTGGAATTCAGCTTCCTTCAACACTGAGACTTCATACCTTCATTTCCCTGCTTTCCACGGAGAACTCACTGCTGACGTG
TGCTTCTTTTTTAAGACCACAGTTTCCTCCGGGGTGTTTATGGAGAACCTGGGGATCACAGATTTCATCAGGATTGAGCTGCGTGCTCCC
ACAGAAGTGACCTTTTCCTTCGATGTGGGGAATGGACCTTGTGAGGTCACGGTGCAGTCACCCACTCCCTTTAATGACAATCAGTGGCAC
CACGTGAGGGCAGAGAGAAATGTTAAAGGAGCGTCTCTTCAAGTTGATCAGCTTCCTCAGAAGATGCAGCCTGCCCCTGCTGATGGGCAC
GTTCGTTTACAGCTCAACAGCCAGCTCTTCATTGGTGGAACGGCCACCAGACAGAGAGGCTTTCTAGGATGCATTCGGTCTCTGCAGTTG
AACGGGGTGGCCCTGGATCTGGAAGAAAGAGCCACAGTGACGCCAGGAGTGGAGCCAGGGTGTGCAGGACACTGCAGCACCTATGGACAC
TTGTGTCGCAATGGAGGGAGATGCAGAGAGAAACGCAGGGGGGTCACCTGTGACTGTGCCTTCTCAGCCTATGATGGGCCGTTCTGCTCC
AATGAGATTTCCGCATATTTTGCAACTGGCTCCTCAATGACATACCATTTTCAAGAACATTACACTTTAAGTGAAAACTCCAGCTCTCTC
GTTTCTTCATTACACAGAGATGTAACATTGACCAGAGAAATGATCACACTGAGCTTCCGAACCACACGAACTCCGAGCTTATTGCTGTAT
GTGAGCTCTTTCTATGAGGAATACCTTTCAGTTATCCTCGCCAACAATGGAAGTTTGCAGATTAGGTACAAGCTAGATAGACATCAAAAT
CCTGATGCATTTACCTTTGATTTTAAAAACATGGCTGATGGGCAACTTCACCAAGTGAAGATTAACAGAGAAGAAGCTGTGGTCATGGTA
GAGGTAATCCCACAAATGCAAAAGTCAAACTAACTAATATTATTATTTTAAGAACAAATAATCTAATGAAAAAATTTGATAATATTAATA
GAAGAGCAACCCATTCAGTGCTGCTCTTCCATAAGTCAAGAAGAAGCCAAATATGGCCAGGATCTGGGAGAGAGGAGGTGGTTGTTTATT
CTGTATTGCTTTGTTTTGTTTGTTTAGCAATGCAATTCTGTCAAAGGTATTATTAATATTTTACTATTTAAAATATCAAAATATCTATTT
GTTTTACTTTACTCAATAGGGGAATGTTCTCTAGTTTATCATAGTGACTGCTGGTGGAATCTATTCATTGATACTGCAGTGGGAACTTGT
CTTATTCTGATTATAAAAGAACAAATACTTTAGCAACTTAAAAACACGGTTTAAAAGCACACAACATAGTTATTAAAATGGGAATAAGTA
AGAAAATAGACCTGAGTCACCACAGAGGAAGTAAATTACACATTGTCATCGGCATTGGAAGGAAAATATACTGTATAGAGAACAACAATG
CTTGGTTTTATGTTTCAGATTTTCTCCACAGAATGAGTACATATTTAAGTTTAAAACAACCAATTCCATCTTTTTCATGGATTCTGCCAA
TTATAGATCCTTCCATTATGAAGAAGAGTAAAGCCAGCAAGTGGGTACATCGTGGATAGAGTGGTAGCTGATGGCATCATAGGAATTGCT
TATAAAATAGCTTCTCTTTCTAAATGATTAATTATTTGAAGGTGGCTTCTTGAGCTTTTGTAATGGTACTTAAAAGTGATTTATTTTCAT
CTTTCCTTTCCTCATCTTCCTTTGCTTCCTTATCATTAAAATTGTACTTTCTGTTGATGTTTGCTTCTCATGGGACATCTAATAGGTTAA
CCAGAGCACAAAGAAACAAGTCATCTTGTCCTCAGGGACAGAATTCAACGCCGTCAAATCTCTCATATTGGGAAAGGTTTTAGGTAAGTA
GGAGAAAGAGCTTTTTCCCAAATAAGTGTCATGTCACAAACTCTGGAAGCATTCATCATGCTGAAAGAAGCTCCTTGTCTTACTTGAATA
ATAATTTCACAGTGAGTGACAATCAAGGTGCAAACTGTACTCTTGCCTGAGTGTACATATAATCATGACTAAGTGCTACCTGTGAGATGT
GCAAGGGCGTTCCTGGAAAAATACCTCCACACTTAACCTCTCACTTGGCAATCATGCATAATGAATCACGGTATTTTTCTAATCCTTCTT
GAAAAGTGAAATGTTGTCAAAGCTGACACGAAGTTCACAGATTATGTATGTATTAATCAACATCAACTCCGGAGACCATCATTCAATGAT
AAAACTACGTTTGAGTTGAACACAAGAGAAAAAACTGGTAATCTTATTACAGCAGATGAATACAGTTTTATTTTTCTCTCAAGCCCTGCT
TTGCCTGTTGTTTCCATCCTTTTTGACTTTAGTATCTAACAGGAATGGGGAGGCATATTCATAAATATCTGTTACGCAAGGTAGAAAGTT
ACAGTAATTGTCTATCATATTGTCTATCATAATCTGTTGTAAAAGCACAGTTAGCTTTACATTTAATAAAGGAACTGAGGAAAGTAATCT
TTTTTTAAAAAAACCCATCTTATGTAACTCAATTAAGAAAATGAACTATACTTTAATATTAGGATCAAAAAGTTGAATAATATTTATTAT

>In-frame_ENST00000367866_ENST00000358144_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=1103AA_start in transcript=51_stop in transcript=3362
MVKIFKMADGGAASQDESSAAAAAAADSRMNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSL
QAAAQSLNVQSKSNEESGDSQQPSQPSQQPSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGA
TISASAATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQP
SITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEA
LNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKE
VIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVIST
APPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPS
LMAPSQFAAGGALLSLNPGTLSGALSPALMSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRN
EWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENL
GITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATR
QRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHF
QEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLH

--------------------------------------------------------------
>In-frame_ENST00000367866_ENST00000323947_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=2396nt_BP=2059nt
GGGAGGGGGGAGGGGAGCCAGAGCGAGGGAGGGTTTATCGACCGGGCGATTTTGGTTAAAATATTCAAAATGGCGGACGGAGGAGCAGCG
AGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTCAAGAATGAACAATCCGTCAGAAACCAGTAAACCATCTATGGAGAGT
GGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGTAGGAGGAGCAATCTCAACAGCCCAGGCG
CAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGCTCAGTCTTTAAATGTACAGTCTAAATCT
AATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGCAGCCATTCCCCAGACCCAGCTTATGCTA
GCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACAGTTACTACTCCAGCAGGCACAGGCACAGGCACAGCTGCTGGCT
GCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAGTGCTGCTGGAGCCACCATCTCCGCCTCTGCTGCCACGCCCATGACGCAGATC
CCCCTGTCTCAGCCCATACAGATCGCACAGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAATCTCAACCTGCAACAGTTTGTGTTG
GTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAGGGTCTCCTGCAAGCGCAAAATCTT
CTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACCTCCCAGCCAGCAACCCCAACACGC
ACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACACCAAAGCGAATTGATACTCCCAGCTTGGAGGAGCCCAGTGAC
CTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAGGGTGATGTTGGGCTCGCTATGGGG
AAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTTAAGAACATGTGCAAGTTGAAGCCA
CTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGTGCCCTGAATTCTCCAGGAATTGAG
GGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAGAGTTTCTTGGAGAATCAAAAGCCT
ACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAAAGAGGTGATTCGTGTTTGGTTCTGTAACCGCCGCCAGAAAGAA
AAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGCCCAACTTCACTGGTGGCGACCACA
CCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGTGCTGCTGTGACGAATCTTTCAGTT
ACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCCTCAGCAGTCACGTCCCCCTCTCTG
AGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTGAGACCAGCACAACACAGACCACCTCCACTCCTTTGTCC
TCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCAAACAGCAGCAGCTGCTGCCCTTCAAGGAGCTGCACAGTTGCCA
GCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCACAGTTTGCGGCTGGAGGTGCCTTA
CTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTGGCAACTATTCAAGATGGAACCCCA
CTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGGAGGTTCTCTGCCTGATGCTCAAAAGTGTACTTGTGGATTAGAG
GGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCGGAATGAATGGTGATTTCCACATGATTTCCCTGCACAAAAATGT
GGTTTTTATTCTTTAATTATGCATAGTTAATTAAATGTCAGACAAGCTGGTACAATAAGGTAACTAAAGTATGTTCAAGCAAGCTGAAAT

>In-frame_ENST00000367866_ENST00000323947_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=722AA_start in transcript=51_stop in transcript=2219
MVKIFKMADGGAASQDESSAAAAAAADSRMNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSL
QAAAQSLNVQSKSNEESGDSQQPSQPSQQPSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGA
TISASAATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQP
SITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEA
LNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKE
VIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVIST
APPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPS
LMAPSQFAAGGALLSLNPGTLSGALSPALMSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRN

--------------------------------------------------------------
>In-frame_ENST00000429375_ENST00000297668_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=4718nt_BP=1808nt
ATTCAAAATGGCGGACGGAGGAGCAGCGAGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTCAAGAATGAACAATCCGTC
AGAAACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGT
AGGAGGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGC
TCAGTCTTTAAATGTACAGTCTAAATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGC
AGCCATTCCCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAATCTCAA
CCTGCAACAGTTTGTGTTGGTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAGGGTCT
CCTGCAAGCGCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACCTCCCA
GCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACACCAAAGCGAATTGATACTCCCAG
CTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAGGGTGA
TGTTGGGCTCGCTATGGGGAAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTTAAGAA
CATGTGCAAGTTGAAGCCACTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGTGCCCT
GAATTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAGAGTTT
CTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAAAGAGGTGATTCGTGTTTGGTTCTG
TAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGCCCAAC
TTCACTGGTGGCGACCACACCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGTGCTGC
TGTGACGAATCTTTCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCCTCAGC
AGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTGAGACCAGCACAACACAGAC
CACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCAAACAGCAGCAGCTGCTGCCCTTCA
AGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCACAGTT
TGCGGCTGGAGGTGCCTTACTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTGGCAAC
TATTCAAGATGGAACCCCACTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGGAGGTTCTCTGCCTGATGCTCAAAA
GTGTACTTGTGGATTAGAGGGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCGGAATGAATGGACTAGTGACACAAT
AGTCCTTTCCCAAAAGGAGCACCTGCCAGTCACTCAGATTGTGATGACAGACGCAGGCCGACCACATTCCGAAGCAGCTTATACACTGGG
GCCACTGCTCTGCCGCGGAGATCAGTCATTCTGGAATTCAGCTTCCTTCAACACTGAGACTTCATACCTTCATTTCCCTGCTTTCCACGG
AGAACTCACTGCTGACGTGTGCTTCTTTTTTAAGACCACAGTTTCCTCCGGGGTGTTTATGGAGAACCTGGGGATCACAGATTTCATCAG
GATTGAGCTGCGTGCTCCCACAGAAGTGACCTTTTCCTTCGATGTGGGGAATGGACCTTGTGAGGTCACGGTGCAGTCACCCACTCCCTT
TAATGACAATCAGTGGCACCACGTGAGGGCAGAGAGAAATGTTAAAGGAGCGTCTCTTCAAGTTGATCAGCTTCCTCAGAAGATGCAGCC
TGCCCCTGCTGATGGGCACGTTCGTTTACAGCTCAACAGCCAGCTCTTCATTGGTGGAACGGCCACCAGACAGAGAGGCTTTCTAGGATG
CATTCGGTCTCTGCAGTTGAACGGGGTGGCCCTGGATCTGGAAGAAAGAGCCACAGTGACGCCAGGAGTGGAGCCAGGGTGTGCAGGACA
CTGCAGCACCTATGGACACTTGTGTCGCAATGGAGGGAGATGCAGAGAGAAACGCAGGGGGGTCACCTGTGACTGTGCCTTCTCAGCCTA
TGATGGGCCGTTCTGCTCCAATGAGATTTCCGCATATTTTGCAACTGGCTCCTCAATGACATACCATTTTCAAGAACATTACACTTTAAG
TGAAAACTCCAGCTCTCTCGTTTCTTCATTACACAGAGATGTAACATTGACCAGAGAAATGATCACACTGAGCTTCCGAACCACACGAAC
TCCGAGCTTATTGCTGTATGTGAGCTCTTTCTATGAGGAATACCTTTCAGTTATCCTCGCCAACAATGGAAGTTTGCAGATTAGGTACAA
GCTAGATAGACATCAAAATCCTGATGCATTTACCTTTGATTTTAAAAACATGGCTGATGGGCAACTTCACCAAGTGAAGATTAACAGAGA
AGAAGCTGTGGTCATGGTAGAGGTTAACCAGAGCACAAAGAAACAAGTCATCTTGTCCTCAGGGACAGAATTCAACGCCGTCAAATCTCT
CATATTGGGAAAGGTTTTAGAGGCTGCCGGCGCGGACCCGGACACAAGGCGGGCGGCGACTAGTGGCTTCACTGGCTGCCTCTCGGCGGT
GCGCTTCGGCCGCGCTGCTCCCCTGAAGGCGGCGCTGCGCCCCAGCGGCCCCTCCCGGGTCACCGTCCGCGGCCACGTGGCCCCTATGGC
CCGCTGCGCAGCGGGGGCGGCGTCCGGCTCCCCGGCGCGGGAACTGGCTCCCCGACTCGCGGGGGGCGCAGGTCGTTCTGGACCAGCGGA
TGAGGGAGAGCCCTTGGTTAATGCAGACAGAAGAGACTCTGCTGTCATCGGAGGTGTGATAGCAGTGGTGATATTTATTTTGCTTTGCAT
CACTGCCATAGCCATACGCATCTATCAACAGAGAAAGTTACGCAAAGAAAATGAGTCAAAAGTCTCAAAAAAAGAAGAGTGCTAGGACAG
CTCTAAACAGTGAGCTCGATGTGCAAAACGCAGTCCATGAAAACCAGAAAGAGCGAGTCTTCTGATTGGCAGCTGTGGCTGTCTCTATCA
TCGTGACTGTGGACTTCCCTGCTGTTGCCATCAGGGTGCACACAAGCAGGTGCAGTGCTGTCACCTGGCTGAAGACCTGCAGCCTCGGAG
CCTCTGGGAGGTCCCTTTCTCCCTCGGTGAAACACAGTCCTCCACATCAATTTCCAAACAATGAATTAGGTATGGCCATTCATCACTGTT
CAGTAGTTTCCCCGTCCAAAGGCTCTCTTCCAAAACTGCAGTTTGATCTGTGTTAATAATTGTGGGGTTTTAGATGAGAAAATGGCTATA
AAGCTGTGGCCCTACTTTATTTTTTAAAAATGACAGAACTTTTGTTCAGATGTAAAAGACAAAATTGCACTTTAATGTTTTTTGTTACTT
GAAAACATATCTGGGATCCCTTTTTTTGGTCCTCTGCTGATATTTATAAAACAAGAAATGCTTCTTGGACTACCTTCACTGGCATTTCCA
TAGTCCTGGAATCCAGAGCCAAGTGGCCTATCTAAAATTCACAGCCCTTTTATTCTCCTGTGTGATGGTTAATACAACACAGTTGAAGCC
TGGAAACACTACCATTATTTTTGGTGTATTGCTTTTTCTAATTGACTGTTTTTAATGATTTTGATACATTTTAATGTTGAAATTAATATT
GAATGTTAGCTATGAAATTTTAGTATTGAATTTTATAATGGAACAGAACATTGGTAGGTAACAAGATGCAAGAGGATGTCAATACAAGAT
TGTCTGCCTGTTTTTCTTTGTAATTTGTAATTACAGTTTTTGTAACTTGTGATTATGTTTTTAACTAAATTTACCACCAGATACAAACAA
TACTTCTTACACAGAGTTATCCTTTATTTATATCATTAAGACGTGAATGAAACATCATCCTAACTTACTTCCCCAAGATATTGAGAGGTC
ATATCTGTTTTTCTTTATCATTCATTTCTTTTTCTAAAAGTTGTTACTGATATGCTTTTGATTTCCTATGACTCTATTATGTTGTACAGA

>In-frame_ENST00000429375_ENST00000297668_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=1195AA_start in transcript=7_stop in transcript=3594
MADGGAASQDESSAAAAAAADSRMNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSLQAAAQS
LNVQSKSNEESGDSQQPSQPSQQPSVQAAIPQTQLMLAGGQITGDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQ
AQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVG
LAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLE
NQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVT
NLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGA
AQLPANASLAAMAAAAGLNPSLMAPSQFAAGGALLSLNPGTLSGALSPALMSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCT
CGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGEL
TADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAP
ADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDG
PFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLD
RHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSTKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRF
GRAAPLKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPADEGEPLVNADRRDSAVIGGVIAVVIFILLCITA

--------------------------------------------------------------
>In-frame_ENST00000429375_ENST00000377656_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=3508nt_BP=1808nt
ATTCAAAATGGCGGACGGAGGAGCAGCGAGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTCAAGAATGAACAATCCGTC
AGAAACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGT
AGGAGGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGC
TCAGTCTTTAAATGTACAGTCTAAATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGC
AGCCATTCCCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAATCTCAA
CCTGCAACAGTTTGTGTTGGTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAGGGTCT
CCTGCAAGCGCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACCTCCCA
GCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACACCAAAGCGAATTGATACTCCCAG
CTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAGGGTGA
TGTTGGGCTCGCTATGGGGAAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTTAAGAA
CATGTGCAAGTTGAAGCCACTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGTGCCCT
GAATTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAGAGTTT
CTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAAAGAGGTGATTCGTGTTTGGTTCTG
TAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGCCCAAC
TTCACTGGTGGCGACCACACCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGTGCTGC
TGTGACGAATCTTTCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCCTCAGC
AGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTGAGACCAGCACAACACAGAC
CACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCAAACAGCAGCAGCTGCTGCCCTTCA
AGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCACAGTT
TGCGGCTGGAGGTGCCTTACTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTGGCAAC
TATTCAAGATGGAACCCCACTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGGAGGTTCTCTGCCTGATGCTCAAAA
GTGTACTTGTGGATTAGAGGGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCGGAATGAATGGACTAGTGACACAAT
AGTCCTTTCCCAAAAGGAGCACCTGCCAGTCACTCAGATTGTGATGACAGACGCAGGCCGACCACATTCCGAAGCAGCTTATACACTGGG
GCCACTGCTCTGCCGCGGAGATCAGTCATTCTGGAATTCAGCTTCCTTCAACACTGAGACTTCATACCTTCATTTCCCTGCTTTCCACGG
AGAACTCACTGCTGACGTGTGCTTCTTTTTTAAGACCACAGTTTCCTCCGGGGTGTTTATGGAGAACCTGGGGATCACAGATTTCATCAG
GATTGAGCTGCGTGCTCCCACAGAAGTGACCTTTTCCTTCGATGTGGGGAATGGACCTTGTGAGGTCACGGTGCAGTCACCCACTCCCTT
TAATGACAATCAGTGGCACCACGTGAGGGCAGAGAGAAATGTTAAAGGAGCGTCTCTTCAAGTTGATCAGCTTCCTCAGAAGATGCAGCC
TGCCCCTGCTGATGGGCACGTTCGTTTACAGCTCAACAGCCAGCTCTTCATTGAGATTTCCGCATATTTTGCAACTGGCTCCTCAATGAC
ATACCATTTTCAAGAACATTACACTTTAAGTGAAAACTCCAGCTCTCTCGTTTCTTCATTACACAGAGATGTAACATTGACCAGAGAAAT
GATCACACTGAGCTTCCGAACCACACGAACTCCGAGCTTATTGCTGTATGTGAGCTCTTTCTATGAGGAATACCTTTCAGTTATCCTCGC
CAACAATGGAAGTTTGCAGATTAGGTACAAGCTAGATAGACATCAAAATCCTGATGCATTTACCTTTGATTTTAAAAACATGGCTGATGG
GCAACTTCACCAAGTGAAGATTAACAGAGAAGAAGCTGTGGTCATGGTAGAGGTTAACCAGAGCACAAAGAAACAAGTCATCTTGTCCTC
AGGGACAGAATTCAACGCCGTCAAATCTCTCATATTGGGAAAGGTTTTAGAGGCTGCCGGCGCGGACCCGGACACAAGGCGGGCGGCGAC
TAGTGGCTTCACTGGCTGCCTCTCGGCGGTGCGCTTCGGCCGCGCTGCTCCCCTGAAGGCGGCGCTGCGCCCCAGCGGCCCCTCCCGGGT
CACCGTCCGCGGCCACGTGGCCCCTATGGCCCGCTGCGCAGCGGGGGCGGCGTCCGGCTCCCCGGCGCGGGAACTGGCTCCCCGACTCGC
GGGGGGCGCAGGTCGTTCTGGACCAGCGGATGAGGGAGAGCCCTTGGTTAATGCAGACAGAAGAGACTCTGCTGTCATCGGAGGTGTGAT
AGCAGTGGTGATATTTATTTTGCTTTGCATCACTGCCATAGCCATACGCATCTATCAACAGAGAAAGTTACGCAAAGAAAATGAGTCAAA
AGTCTCAAAAAAAGAAGAGTGCTAGGACAGCTCTAAACAGTGAGCTCGATGTGCAAAACGCAGTCCATGAAAACCAGAAAGAGCGAGTCT

>In-frame_ENST00000429375_ENST00000377656_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=1115AA_start in transcript=7_stop in transcript=3354
MADGGAASQDESSAAAAAAADSRMNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSLQAAAQS
LNVQSKSNEESGDSQQPSQPSQQPSVQAAIPQTQLMLAGGQITGDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQ
AQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVG
LAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLE
NQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVT
NLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGA
AQLPANASLAAMAAAAGLNPSLMAPSQFAAGGALLSLNPGTLSGALSPALMSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCT
CGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGEL
TADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAP
ADGHVRLQLNSQLFIEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANN
GSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSTKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSG
FTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPADEGEPLVNADRRDSAVIGGVIAV

--------------------------------------------------------------
>In-frame_ENST00000429375_ENST00000358144_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=4821nt_BP=1808nt
ATTCAAAATGGCGGACGGAGGAGCAGCGAGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTCAAGAATGAACAATCCGTC
AGAAACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGT
AGGAGGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGC
TCAGTCTTTAAATGTACAGTCTAAATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGC
AGCCATTCCCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAATCTCAA
CCTGCAACAGTTTGTGTTGGTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAGGGTCT
CCTGCAAGCGCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACCTCCCA
GCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACACCAAAGCGAATTGATACTCCCAG
CTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAGGGTGA
TGTTGGGCTCGCTATGGGGAAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTTAAGAA
CATGTGCAAGTTGAAGCCACTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGTGCCCT
GAATTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAGAGTTT
CTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAAAGAGGTGATTCGTGTTTGGTTCTG
TAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGCCCAAC
TTCACTGGTGGCGACCACACCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGTGCTGC
TGTGACGAATCTTTCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCCTCAGC
AGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTGAGACCAGCACAACACAGAC
CACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCAAACAGCAGCAGCTGCTGCCCTTCA
AGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCACAGTT
TGCGGCTGGAGGTGCCTTACTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTGGCAAC
TATTCAAGATGGAACCCCACTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGGAGGTTCTCTGCCTGATGCTCAAAA
GTGTACTTGTGGATTAGAGGGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCGGAATGAATGGACTAGTGACACAAT
AGTCCTTTCCCAAAAGGAGCACCTGCCAGTCACTCAGATTGTGATGACAGACGCAGGCCGACCACATTCCGAAGCAGCTTATACACTGGG
GCCACTGCTCTGCCGCGGAGATCAGTCATTCTGGAATTCAGCTTCCTTCAACACTGAGACTTCATACCTTCATTTCCCTGCTTTCCACGG
AGAACTCACTGCTGACGTGTGCTTCTTTTTTAAGACCACAGTTTCCTCCGGGGTGTTTATGGAGAACCTGGGGATCACAGATTTCATCAG
GATTGAGCTGCGTGCTCCCACAGAAGTGACCTTTTCCTTCGATGTGGGGAATGGACCTTGTGAGGTCACGGTGCAGTCACCCACTCCCTT
TAATGACAATCAGTGGCACCACGTGAGGGCAGAGAGAAATGTTAAAGGAGCGTCTCTTCAAGTTGATCAGCTTCCTCAGAAGATGCAGCC
TGCCCCTGCTGATGGGCACGTTCGTTTACAGCTCAACAGCCAGCTCTTCATTGGTGGAACGGCCACCAGACAGAGAGGCTTTCTAGGATG
CATTCGGTCTCTGCAGTTGAACGGGGTGGCCCTGGATCTGGAAGAAAGAGCCACAGTGACGCCAGGAGTGGAGCCAGGGTGTGCAGGACA
CTGCAGCACCTATGGACACTTGTGTCGCAATGGAGGGAGATGCAGAGAGAAACGCAGGGGGGTCACCTGTGACTGTGCCTTCTCAGCCTA
TGATGGGCCGTTCTGCTCCAATGAGATTTCCGCATATTTTGCAACTGGCTCCTCAATGACATACCATTTTCAAGAACATTACACTTTAAG
TGAAAACTCCAGCTCTCTCGTTTCTTCATTACACAGAGATGTAACATTGACCAGAGAAATGATCACACTGAGCTTCCGAACCACACGAAC
TCCGAGCTTATTGCTGTATGTGAGCTCTTTCTATGAGGAATACCTTTCAGTTATCCTCGCCAACAATGGAAGTTTGCAGATTAGGTACAA
GCTAGATAGACATCAAAATCCTGATGCATTTACCTTTGATTTTAAAAACATGGCTGATGGGCAACTTCACCAAGTGAAGATTAACAGAGA
AGAAGCTGTGGTCATGGTAGAGGTAATCCCACAAATGCAAAAGTCAAACTAACTAATATTATTATTTTAAGAACAAATAATCTAATGAAA
AAATTTGATAATATTAATAGAAGAGCAACCCATTCAGTGCTGCTCTTCCATAAGTCAAGAAGAAGCCAAATATGGCCAGGATCTGGGAGA
GAGGAGGTGGTTGTTTATTCTGTATTGCTTTGTTTTGTTTGTTTAGCAATGCAATTCTGTCAAAGGTATTATTAATATTTTACTATTTAA
AATATCAAAATATCTATTTGTTTTACTTTACTCAATAGGGGAATGTTCTCTAGTTTATCATAGTGACTGCTGGTGGAATCTATTCATTGA
TACTGCAGTGGGAACTTGTCTTATTCTGATTATAAAAGAACAAATACTTTAGCAACTTAAAAACACGGTTTAAAAGCACACAACATAGTT
ATTAAAATGGGAATAAGTAAGAAAATAGACCTGAGTCACCACAGAGGAAGTAAATTACACATTGTCATCGGCATTGGAAGGAAAATATAC
TGTATAGAGAACAACAATGCTTGGTTTTATGTTTCAGATTTTCTCCACAGAATGAGTACATATTTAAGTTTAAAACAACCAATTCCATCT
TTTTCATGGATTCTGCCAATTATAGATCCTTCCATTATGAAGAAGAGTAAAGCCAGCAAGTGGGTACATCGTGGATAGAGTGGTAGCTGA
TGGCATCATAGGAATTGCTTATAAAATAGCTTCTCTTTCTAAATGATTAATTATTTGAAGGTGGCTTCTTGAGCTTTTGTAATGGTACTT
AAAAGTGATTTATTTTCATCTTTCCTTTCCTCATCTTCCTTTGCTTCCTTATCATTAAAATTGTACTTTCTGTTGATGTTTGCTTCTCAT
GGGACATCTAATAGGTTAACCAGAGCACAAAGAAACAAGTCATCTTGTCCTCAGGGACAGAATTCAACGCCGTCAAATCTCTCATATTGG
GAAAGGTTTTAGGTAAGTAGGAGAAAGAGCTTTTTCCCAAATAAGTGTCATGTCACAAACTCTGGAAGCATTCATCATGCTGAAAGAAGC
TCCTTGTCTTACTTGAATAATAATTTCACAGTGAGTGACAATCAAGGTGCAAACTGTACTCTTGCCTGAGTGTACATATAATCATGACTA
AGTGCTACCTGTGAGATGTGCAAGGGCGTTCCTGGAAAAATACCTCCACACTTAACCTCTCACTTGGCAATCATGCATAATGAATCACGG
TATTTTTCTAATCCTTCTTGAAAAGTGAAATGTTGTCAAAGCTGACACGAAGTTCACAGATTATGTATGTATTAATCAACATCAACTCCG
GAGACCATCATTCAATGATAAAACTACGTTTGAGTTGAACACAAGAGAAAAAACTGGTAATCTTATTACAGCAGATGAATACAGTTTTAT
TTTTCTCTCAAGCCCTGCTTTGCCTGTTGTTTCCATCCTTTTTGACTTTAGTATCTAACAGGAATGGGGAGGCATATTCATAAATATCTG
TTACGCAAGGTAGAAAGTTACAGTAATTGTCTATCATATTGTCTATCATAATCTGTTGTAAAAGCACAGTTAGCTTTACATTTAATAAAG
GAACTGAGGAAAGTAATCTTTTTTTAAAAAAACCCATCTTATGTAACTCAATTAAGAAAATGAACTATACTTTAATATTAGGATCAAAAA

>In-frame_ENST00000429375_ENST00000358144_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=1034AA_start in transcript=7_stop in transcript=3111
MADGGAASQDESSAAAAAAADSRMNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSLQAAAQS
LNVQSKSNEESGDSQQPSQPSQQPSVQAAIPQTQLMLAGGQITGDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQ
AQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVG
LAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLE
NQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVT
NLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGA
AQLPANASLAAMAAAAGLNPSLMAPSQFAAGGALLSLNPGTLSGALSPALMSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCT
CGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGEL
TADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAP
ADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDG
PFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLD

--------------------------------------------------------------
>In-frame_ENST00000429375_ENST00000323947_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=2145nt_BP=1808nt
ATTCAAAATGGCGGACGGAGGAGCAGCGAGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTCAAGAATGAACAATCCGTC
AGAAACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGT
AGGAGGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGC
TCAGTCTTTAAATGTACAGTCTAAATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGC
AGCCATTCCCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAATCTCAA
CCTGCAACAGTTTGTGTTGGTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAGGGTCT
CCTGCAAGCGCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACCTCCCA
GCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACACCAAAGCGAATTGATACTCCCAG
CTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAGGGTGA
TGTTGGGCTCGCTATGGGGAAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTTAAGAA
CATGTGCAAGTTGAAGCCACTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGTGCCCT
GAATTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAGAGTTT
CTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAAAGAGGTGATTCGTGTTTGGTTCTG
TAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGCCCAAC
TTCACTGGTGGCGACCACACCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGTGCTGC
TGTGACGAATCTTTCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCCTCAGC
AGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTGAGACCAGCACAACACAGAC
CACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCAAACAGCAGCAGCTGCTGCCCTTCA
AGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCACAGTT
TGCGGCTGGAGGTGCCTTACTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTGGCAAC
TATTCAAGATGGAACCCCACTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGGAGGTTCTCTGCCTGATGCTCAAAA
GTGTACTTGTGGATTAGAGGGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCGGAATGAATGGTGATTTCCACATGA
TTTCCCTGCACAAAAATGTGGTTTTTATTCTTTAATTATGCATAGTTAATTAAATGTCAGACAAGCTGGTACAATAAGGTAACTAAAGTA

>In-frame_ENST00000429375_ENST00000323947_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=653AA_start in transcript=7_stop in transcript=1968
MADGGAASQDESSAAAAAAADSRMNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSLQAAAQS
LNVQSKSNEESGDSQQPSQPSQQPSVQAAIPQTQLMLAGGQITGDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQ
AQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVG
LAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLE
NQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVT
NLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGA
AQLPANASLAAMAAAAGLNPSLMAPSQFAAGGALLSLNPGTLSGALSPALMSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCT

--------------------------------------------------------------
>In-frame_ENST00000541643_ENST00000297668_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=4993nt_BP=2083nt
CGGAGGAGCAGCGAGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTGGAAAAGTAAGAAGAGCTTTCCTGCCTTTTTAAT
TACCAAACTACTCTCAGTTTTCAATGAATCAGTTCAAAGAAAGAATGCAGTCTTTCTATACCTGACTCAAGAATGAACAATCCGTCAGAA
ACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGTAGGA
GGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGCTCAG
TCTTTAAATGTACAGTCTAAATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGCAGCC
ATTCCCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACAGTTACTACTCCAGCAGGCA
CAGGCACAGGCACAGCTGCTGGCTGCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAGTGCTGCTGGAGCCACCATCTCCGCCTCT
GCTGCCACGCCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGATCGCACAGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAAT
CTCAACCTGCAACAGTTTGTGTTGGTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAG
GGTCTCCTGCAAGCGCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACC
TCCCAGCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACACCAAAGCGAATTGATACT
CCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAG
GGTGATGTTGGGCTCGCTATGGGGAAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTT
AAGAACATGTGCAAGTTGAAGCCACTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGT
GCCCTGAATTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAG
AGTTTCTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAAAGAGGTGATTCGTGTTTGG
TTCTGTAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGC
CCAACTTCACTGGTGGCGACCACACCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGT
GCTGCTGTGACGAATCTTTCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCC
TCAGCAGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTGAGACCAGCACAACA
CAGACCACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCAAACAGCAGCAGCTGCTGCC
CTTCAAGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCA
CAGTTTGCGGCTGGAGGTGCCTTACTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTG
GCAACTATTCAAGATGGAACCCCACTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGGAGGTTCTCTGCCTGATGCT
CAAAAGTGTACTTGTGGATTAGAGGGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCGGAATGAATGGACTAGTGAC
ACAATAGTCCTTTCCCAAAAGGAGCACCTGCCAGTCACTCAGATTGTGATGACAGACGCAGGCCGACCACATTCCGAAGCAGCTTATACA
CTGGGGCCACTGCTCTGCCGCGGAGATCAGTCATTCTGGAATTCAGCTTCCTTCAACACTGAGACTTCATACCTTCATTTCCCTGCTTTC
CACGGAGAACTCACTGCTGACGTGTGCTTCTTTTTTAAGACCACAGTTTCCTCCGGGGTGTTTATGGAGAACCTGGGGATCACAGATTTC
ATCAGGATTGAGCTGCGTGCTCCCACAGAAGTGACCTTTTCCTTCGATGTGGGGAATGGACCTTGTGAGGTCACGGTGCAGTCACCCACT
CCCTTTAATGACAATCAGTGGCACCACGTGAGGGCAGAGAGAAATGTTAAAGGAGCGTCTCTTCAAGTTGATCAGCTTCCTCAGAAGATG
CAGCCTGCCCCTGCTGATGGGCACGTTCGTTTACAGCTCAACAGCCAGCTCTTCATTGGTGGAACGGCCACCAGACAGAGAGGCTTTCTA
GGATGCATTCGGTCTCTGCAGTTGAACGGGGTGGCCCTGGATCTGGAAGAAAGAGCCACAGTGACGCCAGGAGTGGAGCCAGGGTGTGCA
GGACACTGCAGCACCTATGGACACTTGTGTCGCAATGGAGGGAGATGCAGAGAGAAACGCAGGGGGGTCACCTGTGACTGTGCCTTCTCA
GCCTATGATGGGCCGTTCTGCTCCAATGAGATTTCCGCATATTTTGCAACTGGCTCCTCAATGACATACCATTTTCAAGAACATTACACT
TTAAGTGAAAACTCCAGCTCTCTCGTTTCTTCATTACACAGAGATGTAACATTGACCAGAGAAATGATCACACTGAGCTTCCGAACCACA
CGAACTCCGAGCTTATTGCTGTATGTGAGCTCTTTCTATGAGGAATACCTTTCAGTTATCCTCGCCAACAATGGAAGTTTGCAGATTAGG
TACAAGCTAGATAGACATCAAAATCCTGATGCATTTACCTTTGATTTTAAAAACATGGCTGATGGGCAACTTCACCAAGTGAAGATTAAC
AGAGAAGAAGCTGTGGTCATGGTAGAGGTTAACCAGAGCACAAAGAAACAAGTCATCTTGTCCTCAGGGACAGAATTCAACGCCGTCAAA
TCTCTCATATTGGGAAAGGTTTTAGAGGCTGCCGGCGCGGACCCGGACACAAGGCGGGCGGCGACTAGTGGCTTCACTGGCTGCCTCTCG
GCGGTGCGCTTCGGCCGCGCTGCTCCCCTGAAGGCGGCGCTGCGCCCCAGCGGCCCCTCCCGGGTCACCGTCCGCGGCCACGTGGCCCCT
ATGGCCCGCTGCGCAGCGGGGGCGGCGTCCGGCTCCCCGGCGCGGGAACTGGCTCCCCGACTCGCGGGGGGCGCAGGTCGTTCTGGACCA
GCGGATGAGGGAGAGCCCTTGGTTAATGCAGACAGAAGAGACTCTGCTGTCATCGGAGGTGTGATAGCAGTGGTGATATTTATTTTGCTT
TGCATCACTGCCATAGCCATACGCATCTATCAACAGAGAAAGTTACGCAAAGAAAATGAGTCAAAAGTCTCAAAAAAAGAAGAGTGCTAG
GACAGCTCTAAACAGTGAGCTCGATGTGCAAAACGCAGTCCATGAAAACCAGAAAGAGCGAGTCTTCTGATTGGCAGCTGTGGCTGTCTC
TATCATCGTGACTGTGGACTTCCCTGCTGTTGCCATCAGGGTGCACACAAGCAGGTGCAGTGCTGTCACCTGGCTGAAGACCTGCAGCCT
CGGAGCCTCTGGGAGGTCCCTTTCTCCCTCGGTGAAACACAGTCCTCCACATCAATTTCCAAACAATGAATTAGGTATGGCCATTCATCA
CTGTTCAGTAGTTTCCCCGTCCAAAGGCTCTCTTCCAAAACTGCAGTTTGATCTGTGTTAATAATTGTGGGGTTTTAGATGAGAAAATGG
CTATAAAGCTGTGGCCCTACTTTATTTTTTAAAAATGACAGAACTTTTGTTCAGATGTAAAAGACAAAATTGCACTTTAATGTTTTTTGT
TACTTGAAAACATATCTGGGATCCCTTTTTTTGGTCCTCTGCTGATATTTATAAAACAAGAAATGCTTCTTGGACTACCTTCACTGGCAT
TTCCATAGTCCTGGAATCCAGAGCCAAGTGGCCTATCTAAAATTCACAGCCCTTTTATTCTCCTGTGTGATGGTTAATACAACACAGTTG
AAGCCTGGAAACACTACCATTATTTTTGGTGTATTGCTTTTTCTAATTGACTGTTTTTAATGATTTTGATACATTTTAATGTTGAAATTA
ATATTGAATGTTAGCTATGAAATTTTAGTATTGAATTTTATAATGGAACAGAACATTGGTAGGTAACAAGATGCAAGAGGATGTCAATAC
AAGATTGTCTGCCTGTTTTTCTTTGTAATTTGTAATTACAGTTTTTGTAACTTGTGATTATGTTTTTAACTAAATTTACCACCAGATACA
AACAATACTTCTTACACAGAGTTATCCTTTATTTATATCATTAAGACGTGAATGAAACATCATCCTAACTTACTTCCCCAAGATATTGAG
AGGTCATATCTGTTTTTCTTTATCATTCATTTCTTTTTCTAAAAGTTGTTACTGATATGCTTTTGATTTCCTATGACTCTATTATGTTGT

>In-frame_ENST00000541643_ENST00000297668_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=1235AA_start in transcript=162_stop in transcript=3869
MNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSLQAAAQSLNVQSKSNEESGDSQQPSQPSQQ
PSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQPIQIAQDLQQLQ
QLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQST
PKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDS
SLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPI
KAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSA
SETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPSLMAPSQFAAGGALLSLNPGTLSGALSPAL
MSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPH
SEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEV
TVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPG
VEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMIT
LSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSTKKQVILSSGT
EFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGG

--------------------------------------------------------------
>In-frame_ENST00000541643_ENST00000377656_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=3783nt_BP=2083nt
CGGAGGAGCAGCGAGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTGGAAAAGTAAGAAGAGCTTTCCTGCCTTTTTAAT
TACCAAACTACTCTCAGTTTTCAATGAATCAGTTCAAAGAAAGAATGCAGTCTTTCTATACCTGACTCAAGAATGAACAATCCGTCAGAA
ACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGTAGGA
GGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGCTCAG
TCTTTAAATGTACAGTCTAAATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGCAGCC
ATTCCCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACAGTTACTACTCCAGCAGGCA
CAGGCACAGGCACAGCTGCTGGCTGCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAGTGCTGCTGGAGCCACCATCTCCGCCTCT
GCTGCCACGCCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGATCGCACAGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAAT
CTCAACCTGCAACAGTTTGTGTTGGTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAG
GGTCTCCTGCAAGCGCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACC
TCCCAGCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACACCAAAGCGAATTGATACT
CCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAG
GGTGATGTTGGGCTCGCTATGGGGAAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTT
AAGAACATGTGCAAGTTGAAGCCACTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGT
GCCCTGAATTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAG
AGTTTCTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAAAGAGGTGATTCGTGTTTGG
TTCTGTAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGC
CCAACTTCACTGGTGGCGACCACACCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGT
GCTGCTGTGACGAATCTTTCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCC
TCAGCAGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTGAGACCAGCACAACA
CAGACCACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCAAACAGCAGCAGCTGCTGCC
CTTCAAGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCA
CAGTTTGCGGCTGGAGGTGCCTTACTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTG
GCAACTATTCAAGATGGAACCCCACTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGGAGGTTCTCTGCCTGATGCT
CAAAAGTGTACTTGTGGATTAGAGGGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCGGAATGAATGGACTAGTGAC
ACAATAGTCCTTTCCCAAAAGGAGCACCTGCCAGTCACTCAGATTGTGATGACAGACGCAGGCCGACCACATTCCGAAGCAGCTTATACA
CTGGGGCCACTGCTCTGCCGCGGAGATCAGTCATTCTGGAATTCAGCTTCCTTCAACACTGAGACTTCATACCTTCATTTCCCTGCTTTC
CACGGAGAACTCACTGCTGACGTGTGCTTCTTTTTTAAGACCACAGTTTCCTCCGGGGTGTTTATGGAGAACCTGGGGATCACAGATTTC
ATCAGGATTGAGCTGCGTGCTCCCACAGAAGTGACCTTTTCCTTCGATGTGGGGAATGGACCTTGTGAGGTCACGGTGCAGTCACCCACT
CCCTTTAATGACAATCAGTGGCACCACGTGAGGGCAGAGAGAAATGTTAAAGGAGCGTCTCTTCAAGTTGATCAGCTTCCTCAGAAGATG
CAGCCTGCCCCTGCTGATGGGCACGTTCGTTTACAGCTCAACAGCCAGCTCTTCATTGAGATTTCCGCATATTTTGCAACTGGCTCCTCA
ATGACATACCATTTTCAAGAACATTACACTTTAAGTGAAAACTCCAGCTCTCTCGTTTCTTCATTACACAGAGATGTAACATTGACCAGA
GAAATGATCACACTGAGCTTCCGAACCACACGAACTCCGAGCTTATTGCTGTATGTGAGCTCTTTCTATGAGGAATACCTTTCAGTTATC
CTCGCCAACAATGGAAGTTTGCAGATTAGGTACAAGCTAGATAGACATCAAAATCCTGATGCATTTACCTTTGATTTTAAAAACATGGCT
GATGGGCAACTTCACCAAGTGAAGATTAACAGAGAAGAAGCTGTGGTCATGGTAGAGGTTAACCAGAGCACAAAGAAACAAGTCATCTTG
TCCTCAGGGACAGAATTCAACGCCGTCAAATCTCTCATATTGGGAAAGGTTTTAGAGGCTGCCGGCGCGGACCCGGACACAAGGCGGGCG
GCGACTAGTGGCTTCACTGGCTGCCTCTCGGCGGTGCGCTTCGGCCGCGCTGCTCCCCTGAAGGCGGCGCTGCGCCCCAGCGGCCCCTCC
CGGGTCACCGTCCGCGGCCACGTGGCCCCTATGGCCCGCTGCGCAGCGGGGGCGGCGTCCGGCTCCCCGGCGCGGGAACTGGCTCCCCGA
CTCGCGGGGGGCGCAGGTCGTTCTGGACCAGCGGATGAGGGAGAGCCCTTGGTTAATGCAGACAGAAGAGACTCTGCTGTCATCGGAGGT
GTGATAGCAGTGGTGATATTTATTTTGCTTTGCATCACTGCCATAGCCATACGCATCTATCAACAGAGAAAGTTACGCAAAGAAAATGAG
TCAAAAGTCTCAAAAAAAGAAGAGTGCTAGGACAGCTCTAAACAGTGAGCTCGATGTGCAAAACGCAGTCCATGAAAACCAGAAAGAGCG
AGTCTTCTGATTGGCAGCTGTGGCTGTCTCTATCATCGTGACTGTGGACTTCCCTGCTGTTGCCATCAGGGTGCACACAAGCAGGTGCAG

>In-frame_ENST00000541643_ENST00000377656_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=1155AA_start in transcript=162_stop in transcript=3629
MNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSLQAAAQSLNVQSKSNEESGDSQQPSQPSQQ
PSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQPIQIAQDLQQLQ
QLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQST
PKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDS
SLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPI
KAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSA
SETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPSLMAPSQFAAGGALLSLNPGTLSGALSPAL
MSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPH
SEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEV
TVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHR
DVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQST
KKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPA

--------------------------------------------------------------
>In-frame_ENST00000541643_ENST00000358144_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=5096nt_BP=2083nt
CGGAGGAGCAGCGAGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTGGAAAAGTAAGAAGAGCTTTCCTGCCTTTTTAAT
TACCAAACTACTCTCAGTTTTCAATGAATCAGTTCAAAGAAAGAATGCAGTCTTTCTATACCTGACTCAAGAATGAACAATCCGTCAGAA
ACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGTAGGA
GGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGCTCAG
TCTTTAAATGTACAGTCTAAATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGCAGCC
ATTCCCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACAGTTACTACTCCAGCAGGCA
CAGGCACAGGCACAGCTGCTGGCTGCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAGTGCTGCTGGAGCCACCATCTCCGCCTCT
GCTGCCACGCCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGATCGCACAGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAAT
CTCAACCTGCAACAGTTTGTGTTGGTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAG
GGTCTCCTGCAAGCGCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACC
TCCCAGCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACACCAAAGCGAATTGATACT
CCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAG
GGTGATGTTGGGCTCGCTATGGGGAAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTT
AAGAACATGTGCAAGTTGAAGCCACTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGT
GCCCTGAATTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAG
AGTTTCTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAAAGAGGTGATTCGTGTTTGG
TTCTGTAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGC
CCAACTTCACTGGTGGCGACCACACCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGT
GCTGCTGTGACGAATCTTTCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCC
TCAGCAGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTGAGACCAGCACAACA
CAGACCACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCAAACAGCAGCAGCTGCTGCC
CTTCAAGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCA
CAGTTTGCGGCTGGAGGTGCCTTACTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTG
GCAACTATTCAAGATGGAACCCCACTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGGAGGTTCTCTGCCTGATGCT
CAAAAGTGTACTTGTGGATTAGAGGGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCGGAATGAATGGACTAGTGAC
ACAATAGTCCTTTCCCAAAAGGAGCACCTGCCAGTCACTCAGATTGTGATGACAGACGCAGGCCGACCACATTCCGAAGCAGCTTATACA
CTGGGGCCACTGCTCTGCCGCGGAGATCAGTCATTCTGGAATTCAGCTTCCTTCAACACTGAGACTTCATACCTTCATTTCCCTGCTTTC
CACGGAGAACTCACTGCTGACGTGTGCTTCTTTTTTAAGACCACAGTTTCCTCCGGGGTGTTTATGGAGAACCTGGGGATCACAGATTTC
ATCAGGATTGAGCTGCGTGCTCCCACAGAAGTGACCTTTTCCTTCGATGTGGGGAATGGACCTTGTGAGGTCACGGTGCAGTCACCCACT
CCCTTTAATGACAATCAGTGGCACCACGTGAGGGCAGAGAGAAATGTTAAAGGAGCGTCTCTTCAAGTTGATCAGCTTCCTCAGAAGATG
CAGCCTGCCCCTGCTGATGGGCACGTTCGTTTACAGCTCAACAGCCAGCTCTTCATTGGTGGAACGGCCACCAGACAGAGAGGCTTTCTA
GGATGCATTCGGTCTCTGCAGTTGAACGGGGTGGCCCTGGATCTGGAAGAAAGAGCCACAGTGACGCCAGGAGTGGAGCCAGGGTGTGCA
GGACACTGCAGCACCTATGGACACTTGTGTCGCAATGGAGGGAGATGCAGAGAGAAACGCAGGGGGGTCACCTGTGACTGTGCCTTCTCA
GCCTATGATGGGCCGTTCTGCTCCAATGAGATTTCCGCATATTTTGCAACTGGCTCCTCAATGACATACCATTTTCAAGAACATTACACT
TTAAGTGAAAACTCCAGCTCTCTCGTTTCTTCATTACACAGAGATGTAACATTGACCAGAGAAATGATCACACTGAGCTTCCGAACCACA
CGAACTCCGAGCTTATTGCTGTATGTGAGCTCTTTCTATGAGGAATACCTTTCAGTTATCCTCGCCAACAATGGAAGTTTGCAGATTAGG
TACAAGCTAGATAGACATCAAAATCCTGATGCATTTACCTTTGATTTTAAAAACATGGCTGATGGGCAACTTCACCAAGTGAAGATTAAC
AGAGAAGAAGCTGTGGTCATGGTAGAGGTAATCCCACAAATGCAAAAGTCAAACTAACTAATATTATTATTTTAAGAACAAATAATCTAA
TGAAAAAATTTGATAATATTAATAGAAGAGCAACCCATTCAGTGCTGCTCTTCCATAAGTCAAGAAGAAGCCAAATATGGCCAGGATCTG
GGAGAGAGGAGGTGGTTGTTTATTCTGTATTGCTTTGTTTTGTTTGTTTAGCAATGCAATTCTGTCAAAGGTATTATTAATATTTTACTA
TTTAAAATATCAAAATATCTATTTGTTTTACTTTACTCAATAGGGGAATGTTCTCTAGTTTATCATAGTGACTGCTGGTGGAATCTATTC
ATTGATACTGCAGTGGGAACTTGTCTTATTCTGATTATAAAAGAACAAATACTTTAGCAACTTAAAAACACGGTTTAAAAGCACACAACA
TAGTTATTAAAATGGGAATAAGTAAGAAAATAGACCTGAGTCACCACAGAGGAAGTAAATTACACATTGTCATCGGCATTGGAAGGAAAA
TATACTGTATAGAGAACAACAATGCTTGGTTTTATGTTTCAGATTTTCTCCACAGAATGAGTACATATTTAAGTTTAAAACAACCAATTC
CATCTTTTTCATGGATTCTGCCAATTATAGATCCTTCCATTATGAAGAAGAGTAAAGCCAGCAAGTGGGTACATCGTGGATAGAGTGGTA
GCTGATGGCATCATAGGAATTGCTTATAAAATAGCTTCTCTTTCTAAATGATTAATTATTTGAAGGTGGCTTCTTGAGCTTTTGTAATGG
TACTTAAAAGTGATTTATTTTCATCTTTCCTTTCCTCATCTTCCTTTGCTTCCTTATCATTAAAATTGTACTTTCTGTTGATGTTTGCTT
CTCATGGGACATCTAATAGGTTAACCAGAGCACAAAGAAACAAGTCATCTTGTCCTCAGGGACAGAATTCAACGCCGTCAAATCTCTCAT
ATTGGGAAAGGTTTTAGGTAAGTAGGAGAAAGAGCTTTTTCCCAAATAAGTGTCATGTCACAAACTCTGGAAGCATTCATCATGCTGAAA
GAAGCTCCTTGTCTTACTTGAATAATAATTTCACAGTGAGTGACAATCAAGGTGCAAACTGTACTCTTGCCTGAGTGTACATATAATCAT
GACTAAGTGCTACCTGTGAGATGTGCAAGGGCGTTCCTGGAAAAATACCTCCACACTTAACCTCTCACTTGGCAATCATGCATAATGAAT
CACGGTATTTTTCTAATCCTTCTTGAAAAGTGAAATGTTGTCAAAGCTGACACGAAGTTCACAGATTATGTATGTATTAATCAACATCAA
CTCCGGAGACCATCATTCAATGATAAAACTACGTTTGAGTTGAACACAAGAGAAAAAACTGGTAATCTTATTACAGCAGATGAATACAGT
TTTATTTTTCTCTCAAGCCCTGCTTTGCCTGTTGTTTCCATCCTTTTTGACTTTAGTATCTAACAGGAATGGGGAGGCATATTCATAAAT
ATCTGTTACGCAAGGTAGAAAGTTACAGTAATTGTCTATCATATTGTCTATCATAATCTGTTGTAAAAGCACAGTTAGCTTTACATTTAA
TAAAGGAACTGAGGAAAGTAATCTTTTTTTAAAAAAACCCATCTTATGTAACTCAATTAAGAAAATGAACTATACTTTAATATTAGGATC

>In-frame_ENST00000541643_ENST00000358144_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=1074AA_start in transcript=162_stop in transcript=3386
MNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSLQAAAQSLNVQSKSNEESGDSQQPSQPSQQ
PSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQPIQIAQDLQQLQ
QLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQST
PKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDS
SLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPI
KAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSA
SETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPSLMAPSQFAAGGALLSLNPGTLSGALSPAL
MSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPH
SEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEV
TVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPG
VEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMIT

--------------------------------------------------------------
>In-frame_ENST00000541643_ENST00000323947_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=2420nt_BP=2083nt
CGGAGGAGCAGCGAGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTGGAAAAGTAAGAAGAGCTTTCCTGCCTTTTTAAT
TACCAAACTACTCTCAGTTTTCAATGAATCAGTTCAAAGAAAGAATGCAGTCTTTCTATACCTGACTCAAGAATGAACAATCCGTCAGAA
ACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGTAGGA
GGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGCTCAG
TCTTTAAATGTACAGTCTAAATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGCAGCC
ATTCCCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACAGTTACTACTCCAGCAGGCA
CAGGCACAGGCACAGCTGCTGGCTGCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAGTGCTGCTGGAGCCACCATCTCCGCCTCT
GCTGCCACGCCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGATCGCACAGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAAT
CTCAACCTGCAACAGTTTGTGTTGGTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAG
GGTCTCCTGCAAGCGCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACC
TCCCAGCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACACCAAAGCGAATTGATACT
CCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAG
GGTGATGTTGGGCTCGCTATGGGGAAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTT
AAGAACATGTGCAAGTTGAAGCCACTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGT
GCCCTGAATTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAG
AGTTTCTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAAAGAGGTGATTCGTGTTTGG
TTCTGTAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGC
CCAACTTCACTGGTGGCGACCACACCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGT
GCTGCTGTGACGAATCTTTCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCC
TCAGCAGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTGAGACCAGCACAACA
CAGACCACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCAAACAGCAGCAGCTGCTGCC
CTTCAAGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCA
CAGTTTGCGGCTGGAGGTGCCTTACTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTG
GCAACTATTCAAGATGGAACCCCACTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGGAGGTTCTCTGCCTGATGCT
CAAAAGTGTACTTGTGGATTAGAGGGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCGGAATGAATGGTGATTTCCA
CATGATTTCCCTGCACAAAAATGTGGTTTTTATTCTTTAATTATGCATAGTTAATTAAATGTCAGACAAGCTGGTACAATAAGGTAACTA

>In-frame_ENST00000541643_ENST00000323947_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=693AA_start in transcript=162_stop in transcript=2243
MNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSLQAAAQSLNVQSKSNEESGDSQQPSQPSQQ
PSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQPIQIAQDLQQLQ
QLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQST
PKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDS
SLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPI
KAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSA
SETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPSLMAPSQFAAGGALLSLNPGTLSGALSPAL

--------------------------------------------------------------
>In-frame_ENST00000420254_ENST00000297668_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=4993nt_BP=2083nt
CGGAGGAGCAGCGAGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTGGAAAAGTAAGAAGAGCTTTCCTGCCTTTTTAAT
TACCAAACTACTCTCAGTTTTCAATGAATCAGTTCAAAGAAAGAATGCAGTCTTTCTATACCTGACTCAAGAATGAACAATCCGTCAGAA
ACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGTAGGA
GGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGCTCAG
TCTTTAAATGTACAGTCTAAATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGCAGCC
ATTCCCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACAGTTACTACTCCAGCAGGCA
CAGGCACAGGCACAGCTGCTGGCTGCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAGTGCTGCTGGAGCCACCATCTCCGCCTCT
GCTGCCACGCCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGATCGCACAGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAAT
CTCAACCTGCAACAGTTTGTGTTGGTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAG
GGTCTCCTGCAAGCGCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACC
TCCCAGCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACACCAAAGCGAATTGATACT
CCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAG
GGTGATGTTGGGCTCGCTATGGGGAAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTT
AAGAACATGTGCAAGTTGAAGCCACTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGT
GCCCTGAATTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAG
AGTTTCTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAAAGAGGTGATTCGTGTTTGG
TTCTGTAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGC
CCAACTTCACTGGTGGCGACCACACCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGT
GCTGCTGTGACGAATCTTTCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCC
TCAGCAGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTGAGACCAGCACAACA
CAGACCACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCAAACAGCAGCAGCTGCTGCC
CTTCAAGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCA
CAGTTTGCGGCTGGAGGTGCCTTACTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTG
GCAACTATTCAAGATGGAACCCCACTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGGAGGTTCTCTGCCTGATGCT
CAAAAGTGTACTTGTGGATTAGAGGGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCGGAATGAATGGACTAGTGAC
ACAATAGTCCTTTCCCAAAAGGAGCACCTGCCAGTCACTCAGATTGTGATGACAGACGCAGGCCGACCACATTCCGAAGCAGCTTATACA
CTGGGGCCACTGCTCTGCCGCGGAGATCAGTCATTCTGGAATTCAGCTTCCTTCAACACTGAGACTTCATACCTTCATTTCCCTGCTTTC
CACGGAGAACTCACTGCTGACGTGTGCTTCTTTTTTAAGACCACAGTTTCCTCCGGGGTGTTTATGGAGAACCTGGGGATCACAGATTTC
ATCAGGATTGAGCTGCGTGCTCCCACAGAAGTGACCTTTTCCTTCGATGTGGGGAATGGACCTTGTGAGGTCACGGTGCAGTCACCCACT
CCCTTTAATGACAATCAGTGGCACCACGTGAGGGCAGAGAGAAATGTTAAAGGAGCGTCTCTTCAAGTTGATCAGCTTCCTCAGAAGATG
CAGCCTGCCCCTGCTGATGGGCACGTTCGTTTACAGCTCAACAGCCAGCTCTTCATTGGTGGAACGGCCACCAGACAGAGAGGCTTTCTA
GGATGCATTCGGTCTCTGCAGTTGAACGGGGTGGCCCTGGATCTGGAAGAAAGAGCCACAGTGACGCCAGGAGTGGAGCCAGGGTGTGCA
GGACACTGCAGCACCTATGGACACTTGTGTCGCAATGGAGGGAGATGCAGAGAGAAACGCAGGGGGGTCACCTGTGACTGTGCCTTCTCA
GCCTATGATGGGCCGTTCTGCTCCAATGAGATTTCCGCATATTTTGCAACTGGCTCCTCAATGACATACCATTTTCAAGAACATTACACT
TTAAGTGAAAACTCCAGCTCTCTCGTTTCTTCATTACACAGAGATGTAACATTGACCAGAGAAATGATCACACTGAGCTTCCGAACCACA
CGAACTCCGAGCTTATTGCTGTATGTGAGCTCTTTCTATGAGGAATACCTTTCAGTTATCCTCGCCAACAATGGAAGTTTGCAGATTAGG
TACAAGCTAGATAGACATCAAAATCCTGATGCATTTACCTTTGATTTTAAAAACATGGCTGATGGGCAACTTCACCAAGTGAAGATTAAC
AGAGAAGAAGCTGTGGTCATGGTAGAGGTTAACCAGAGCACAAAGAAACAAGTCATCTTGTCCTCAGGGACAGAATTCAACGCCGTCAAA
TCTCTCATATTGGGAAAGGTTTTAGAGGCTGCCGGCGCGGACCCGGACACAAGGCGGGCGGCGACTAGTGGCTTCACTGGCTGCCTCTCG
GCGGTGCGCTTCGGCCGCGCTGCTCCCCTGAAGGCGGCGCTGCGCCCCAGCGGCCCCTCCCGGGTCACCGTCCGCGGCCACGTGGCCCCT
ATGGCCCGCTGCGCAGCGGGGGCGGCGTCCGGCTCCCCGGCGCGGGAACTGGCTCCCCGACTCGCGGGGGGCGCAGGTCGTTCTGGACCA
GCGGATGAGGGAGAGCCCTTGGTTAATGCAGACAGAAGAGACTCTGCTGTCATCGGAGGTGTGATAGCAGTGGTGATATTTATTTTGCTT
TGCATCACTGCCATAGCCATACGCATCTATCAACAGAGAAAGTTACGCAAAGAAAATGAGTCAAAAGTCTCAAAAAAAGAAGAGTGCTAG
GACAGCTCTAAACAGTGAGCTCGATGTGCAAAACGCAGTCCATGAAAACCAGAAAGAGCGAGTCTTCTGATTGGCAGCTGTGGCTGTCTC
TATCATCGTGACTGTGGACTTCCCTGCTGTTGCCATCAGGGTGCACACAAGCAGGTGCAGTGCTGTCACCTGGCTGAAGACCTGCAGCCT
CGGAGCCTCTGGGAGGTCCCTTTCTCCCTCGGTGAAACACAGTCCTCCACATCAATTTCCAAACAATGAATTAGGTATGGCCATTCATCA
CTGTTCAGTAGTTTCCCCGTCCAAAGGCTCTCTTCCAAAACTGCAGTTTGATCTGTGTTAATAATTGTGGGGTTTTAGATGAGAAAATGG
CTATAAAGCTGTGGCCCTACTTTATTTTTTAAAAATGACAGAACTTTTGTTCAGATGTAAAAGACAAAATTGCACTTTAATGTTTTTTGT
TACTTGAAAACATATCTGGGATCCCTTTTTTTGGTCCTCTGCTGATATTTATAAAACAAGAAATGCTTCTTGGACTACCTTCACTGGCAT
TTCCATAGTCCTGGAATCCAGAGCCAAGTGGCCTATCTAAAATTCACAGCCCTTTTATTCTCCTGTGTGATGGTTAATACAACACAGTTG
AAGCCTGGAAACACTACCATTATTTTTGGTGTATTGCTTTTTCTAATTGACTGTTTTTAATGATTTTGATACATTTTAATGTTGAAATTA
ATATTGAATGTTAGCTATGAAATTTTAGTATTGAATTTTATAATGGAACAGAACATTGGTAGGTAACAAGATGCAAGAGGATGTCAATAC
AAGATTGTCTGCCTGTTTTTCTTTGTAATTTGTAATTACAGTTTTTGTAACTTGTGATTATGTTTTTAACTAAATTTACCACCAGATACA
AACAATACTTCTTACACAGAGTTATCCTTTATTTATATCATTAAGACGTGAATGAAACATCATCCTAACTTACTTCCCCAAGATATTGAG
AGGTCATATCTGTTTTTCTTTATCATTCATTTCTTTTTCTAAAAGTTGTTACTGATATGCTTTTGATTTCCTATGACTCTATTATGTTGT

>In-frame_ENST00000420254_ENST00000297668_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=1235AA_start in transcript=162_stop in transcript=3869
MNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSLQAAAQSLNVQSKSNEESGDSQQPSQPSQQ
PSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQPIQIAQDLQQLQ
QLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQST
PKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDS
SLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPI
KAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSA
SETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPSLMAPSQFAAGGALLSLNPGTLSGALSPAL
MSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPH
SEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEV
TVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPG
VEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMIT
LSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSTKKQVILSSGT
EFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGG

--------------------------------------------------------------
>In-frame_ENST00000420254_ENST00000377656_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=3783nt_BP=2083nt
CGGAGGAGCAGCGAGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTGGAAAAGTAAGAAGAGCTTTCCTGCCTTTTTAAT
TACCAAACTACTCTCAGTTTTCAATGAATCAGTTCAAAGAAAGAATGCAGTCTTTCTATACCTGACTCAAGAATGAACAATCCGTCAGAA
ACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGTAGGA
GGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGCTCAG
TCTTTAAATGTACAGTCTAAATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGCAGCC
ATTCCCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACAGTTACTACTCCAGCAGGCA
CAGGCACAGGCACAGCTGCTGGCTGCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAGTGCTGCTGGAGCCACCATCTCCGCCTCT
GCTGCCACGCCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGATCGCACAGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAAT
CTCAACCTGCAACAGTTTGTGTTGGTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAG
GGTCTCCTGCAAGCGCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACC
TCCCAGCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACACCAAAGCGAATTGATACT
CCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAG
GGTGATGTTGGGCTCGCTATGGGGAAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTT
AAGAACATGTGCAAGTTGAAGCCACTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGT
GCCCTGAATTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAG
AGTTTCTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAAAGAGGTGATTCGTGTTTGG
TTCTGTAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGC
CCAACTTCACTGGTGGCGACCACACCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGT
GCTGCTGTGACGAATCTTTCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCC
TCAGCAGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTGAGACCAGCACAACA
CAGACCACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCAAACAGCAGCAGCTGCTGCC
CTTCAAGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCA
CAGTTTGCGGCTGGAGGTGCCTTACTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTG
GCAACTATTCAAGATGGAACCCCACTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGGAGGTTCTCTGCCTGATGCT
CAAAAGTGTACTTGTGGATTAGAGGGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCGGAATGAATGGACTAGTGAC
ACAATAGTCCTTTCCCAAAAGGAGCACCTGCCAGTCACTCAGATTGTGATGACAGACGCAGGCCGACCACATTCCGAAGCAGCTTATACA
CTGGGGCCACTGCTCTGCCGCGGAGATCAGTCATTCTGGAATTCAGCTTCCTTCAACACTGAGACTTCATACCTTCATTTCCCTGCTTTC
CACGGAGAACTCACTGCTGACGTGTGCTTCTTTTTTAAGACCACAGTTTCCTCCGGGGTGTTTATGGAGAACCTGGGGATCACAGATTTC
ATCAGGATTGAGCTGCGTGCTCCCACAGAAGTGACCTTTTCCTTCGATGTGGGGAATGGACCTTGTGAGGTCACGGTGCAGTCACCCACT
CCCTTTAATGACAATCAGTGGCACCACGTGAGGGCAGAGAGAAATGTTAAAGGAGCGTCTCTTCAAGTTGATCAGCTTCCTCAGAAGATG
CAGCCTGCCCCTGCTGATGGGCACGTTCGTTTACAGCTCAACAGCCAGCTCTTCATTGAGATTTCCGCATATTTTGCAACTGGCTCCTCA
ATGACATACCATTTTCAAGAACATTACACTTTAAGTGAAAACTCCAGCTCTCTCGTTTCTTCATTACACAGAGATGTAACATTGACCAGA
GAAATGATCACACTGAGCTTCCGAACCACACGAACTCCGAGCTTATTGCTGTATGTGAGCTCTTTCTATGAGGAATACCTTTCAGTTATC
CTCGCCAACAATGGAAGTTTGCAGATTAGGTACAAGCTAGATAGACATCAAAATCCTGATGCATTTACCTTTGATTTTAAAAACATGGCT
GATGGGCAACTTCACCAAGTGAAGATTAACAGAGAAGAAGCTGTGGTCATGGTAGAGGTTAACCAGAGCACAAAGAAACAAGTCATCTTG
TCCTCAGGGACAGAATTCAACGCCGTCAAATCTCTCATATTGGGAAAGGTTTTAGAGGCTGCCGGCGCGGACCCGGACACAAGGCGGGCG
GCGACTAGTGGCTTCACTGGCTGCCTCTCGGCGGTGCGCTTCGGCCGCGCTGCTCCCCTGAAGGCGGCGCTGCGCCCCAGCGGCCCCTCC
CGGGTCACCGTCCGCGGCCACGTGGCCCCTATGGCCCGCTGCGCAGCGGGGGCGGCGTCCGGCTCCCCGGCGCGGGAACTGGCTCCCCGA
CTCGCGGGGGGCGCAGGTCGTTCTGGACCAGCGGATGAGGGAGAGCCCTTGGTTAATGCAGACAGAAGAGACTCTGCTGTCATCGGAGGT
GTGATAGCAGTGGTGATATTTATTTTGCTTTGCATCACTGCCATAGCCATACGCATCTATCAACAGAGAAAGTTACGCAAAGAAAATGAG
TCAAAAGTCTCAAAAAAAGAAGAGTGCTAGGACAGCTCTAAACAGTGAGCTCGATGTGCAAAACGCAGTCCATGAAAACCAGAAAGAGCG
AGTCTTCTGATTGGCAGCTGTGGCTGTCTCTATCATCGTGACTGTGGACTTCCCTGCTGTTGCCATCAGGGTGCACACAAGCAGGTGCAG

>In-frame_ENST00000420254_ENST00000377656_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=1155AA_start in transcript=162_stop in transcript=3629
MNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSLQAAAQSLNVQSKSNEESGDSQQPSQPSQQ
PSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQPIQIAQDLQQLQ
QLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQST
PKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDS
SLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPI
KAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSA
SETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPSLMAPSQFAAGGALLSLNPGTLSGALSPAL
MSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPH
SEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEV
TVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHR
DVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQST
KKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPA

--------------------------------------------------------------
>In-frame_ENST00000420254_ENST00000358144_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=5096nt_BP=2083nt
CGGAGGAGCAGCGAGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTGGAAAAGTAAGAAGAGCTTTCCTGCCTTTTTAAT
TACCAAACTACTCTCAGTTTTCAATGAATCAGTTCAAAGAAAGAATGCAGTCTTTCTATACCTGACTCAAGAATGAACAATCCGTCAGAA
ACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGTAGGA
GGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGCTCAG
TCTTTAAATGTACAGTCTAAATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGCAGCC
ATTCCCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACAGTTACTACTCCAGCAGGCA
CAGGCACAGGCACAGCTGCTGGCTGCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAGTGCTGCTGGAGCCACCATCTCCGCCTCT
GCTGCCACGCCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGATCGCACAGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAAT
CTCAACCTGCAACAGTTTGTGTTGGTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAG
GGTCTCCTGCAAGCGCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACC
TCCCAGCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACACCAAAGCGAATTGATACT
CCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAG
GGTGATGTTGGGCTCGCTATGGGGAAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTT
AAGAACATGTGCAAGTTGAAGCCACTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGT
GCCCTGAATTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAG
AGTTTCTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAAAGAGGTGATTCGTGTTTGG
TTCTGTAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGC
CCAACTTCACTGGTGGCGACCACACCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGT
GCTGCTGTGACGAATCTTTCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCC
TCAGCAGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTGAGACCAGCACAACA
CAGACCACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCAAACAGCAGCAGCTGCTGCC
CTTCAAGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCA
CAGTTTGCGGCTGGAGGTGCCTTACTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTG
GCAACTATTCAAGATGGAACCCCACTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGGAGGTTCTCTGCCTGATGCT
CAAAAGTGTACTTGTGGATTAGAGGGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCGGAATGAATGGACTAGTGAC
ACAATAGTCCTTTCCCAAAAGGAGCACCTGCCAGTCACTCAGATTGTGATGACAGACGCAGGCCGACCACATTCCGAAGCAGCTTATACA
CTGGGGCCACTGCTCTGCCGCGGAGATCAGTCATTCTGGAATTCAGCTTCCTTCAACACTGAGACTTCATACCTTCATTTCCCTGCTTTC
CACGGAGAACTCACTGCTGACGTGTGCTTCTTTTTTAAGACCACAGTTTCCTCCGGGGTGTTTATGGAGAACCTGGGGATCACAGATTTC
ATCAGGATTGAGCTGCGTGCTCCCACAGAAGTGACCTTTTCCTTCGATGTGGGGAATGGACCTTGTGAGGTCACGGTGCAGTCACCCACT
CCCTTTAATGACAATCAGTGGCACCACGTGAGGGCAGAGAGAAATGTTAAAGGAGCGTCTCTTCAAGTTGATCAGCTTCCTCAGAAGATG
CAGCCTGCCCCTGCTGATGGGCACGTTCGTTTACAGCTCAACAGCCAGCTCTTCATTGGTGGAACGGCCACCAGACAGAGAGGCTTTCTA
GGATGCATTCGGTCTCTGCAGTTGAACGGGGTGGCCCTGGATCTGGAAGAAAGAGCCACAGTGACGCCAGGAGTGGAGCCAGGGTGTGCA
GGACACTGCAGCACCTATGGACACTTGTGTCGCAATGGAGGGAGATGCAGAGAGAAACGCAGGGGGGTCACCTGTGACTGTGCCTTCTCA
GCCTATGATGGGCCGTTCTGCTCCAATGAGATTTCCGCATATTTTGCAACTGGCTCCTCAATGACATACCATTTTCAAGAACATTACACT
TTAAGTGAAAACTCCAGCTCTCTCGTTTCTTCATTACACAGAGATGTAACATTGACCAGAGAAATGATCACACTGAGCTTCCGAACCACA
CGAACTCCGAGCTTATTGCTGTATGTGAGCTCTTTCTATGAGGAATACCTTTCAGTTATCCTCGCCAACAATGGAAGTTTGCAGATTAGG
TACAAGCTAGATAGACATCAAAATCCTGATGCATTTACCTTTGATTTTAAAAACATGGCTGATGGGCAACTTCACCAAGTGAAGATTAAC
AGAGAAGAAGCTGTGGTCATGGTAGAGGTAATCCCACAAATGCAAAAGTCAAACTAACTAATATTATTATTTTAAGAACAAATAATCTAA
TGAAAAAATTTGATAATATTAATAGAAGAGCAACCCATTCAGTGCTGCTCTTCCATAAGTCAAGAAGAAGCCAAATATGGCCAGGATCTG
GGAGAGAGGAGGTGGTTGTTTATTCTGTATTGCTTTGTTTTGTTTGTTTAGCAATGCAATTCTGTCAAAGGTATTATTAATATTTTACTA
TTTAAAATATCAAAATATCTATTTGTTTTACTTTACTCAATAGGGGAATGTTCTCTAGTTTATCATAGTGACTGCTGGTGGAATCTATTC
ATTGATACTGCAGTGGGAACTTGTCTTATTCTGATTATAAAAGAACAAATACTTTAGCAACTTAAAAACACGGTTTAAAAGCACACAACA
TAGTTATTAAAATGGGAATAAGTAAGAAAATAGACCTGAGTCACCACAGAGGAAGTAAATTACACATTGTCATCGGCATTGGAAGGAAAA
TATACTGTATAGAGAACAACAATGCTTGGTTTTATGTTTCAGATTTTCTCCACAGAATGAGTACATATTTAAGTTTAAAACAACCAATTC
CATCTTTTTCATGGATTCTGCCAATTATAGATCCTTCCATTATGAAGAAGAGTAAAGCCAGCAAGTGGGTACATCGTGGATAGAGTGGTA
GCTGATGGCATCATAGGAATTGCTTATAAAATAGCTTCTCTTTCTAAATGATTAATTATTTGAAGGTGGCTTCTTGAGCTTTTGTAATGG
TACTTAAAAGTGATTTATTTTCATCTTTCCTTTCCTCATCTTCCTTTGCTTCCTTATCATTAAAATTGTACTTTCTGTTGATGTTTGCTT
CTCATGGGACATCTAATAGGTTAACCAGAGCACAAAGAAACAAGTCATCTTGTCCTCAGGGACAGAATTCAACGCCGTCAAATCTCTCAT
ATTGGGAAAGGTTTTAGGTAAGTAGGAGAAAGAGCTTTTTCCCAAATAAGTGTCATGTCACAAACTCTGGAAGCATTCATCATGCTGAAA
GAAGCTCCTTGTCTTACTTGAATAATAATTTCACAGTGAGTGACAATCAAGGTGCAAACTGTACTCTTGCCTGAGTGTACATATAATCAT
GACTAAGTGCTACCTGTGAGATGTGCAAGGGCGTTCCTGGAAAAATACCTCCACACTTAACCTCTCACTTGGCAATCATGCATAATGAAT
CACGGTATTTTTCTAATCCTTCTTGAAAAGTGAAATGTTGTCAAAGCTGACACGAAGTTCACAGATTATGTATGTATTAATCAACATCAA
CTCCGGAGACCATCATTCAATGATAAAACTACGTTTGAGTTGAACACAAGAGAAAAAACTGGTAATCTTATTACAGCAGATGAATACAGT
TTTATTTTTCTCTCAAGCCCTGCTTTGCCTGTTGTTTCCATCCTTTTTGACTTTAGTATCTAACAGGAATGGGGAGGCATATTCATAAAT
ATCTGTTACGCAAGGTAGAAAGTTACAGTAATTGTCTATCATATTGTCTATCATAATCTGTTGTAAAAGCACAGTTAGCTTTACATTTAA
TAAAGGAACTGAGGAAAGTAATCTTTTTTTAAAAAAACCCATCTTATGTAACTCAATTAAGAAAATGAACTATACTTTAATATTAGGATC

>In-frame_ENST00000420254_ENST00000358144_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=1074AA_start in transcript=162_stop in transcript=3386
MNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSLQAAAQSLNVQSKSNEESGDSQQPSQPSQQ
PSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQPIQIAQDLQQLQ
QLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQST
PKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDS
SLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPI
KAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSA
SETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPSLMAPSQFAAGGALLSLNPGTLSGALSPAL
MSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPH
SEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEV
TVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPG
VEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMIT

--------------------------------------------------------------
>In-frame_ENST00000420254_ENST00000323947_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=2420nt_BP=2083nt
CGGAGGAGCAGCGAGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTGGAAAAGTAAGAAGAGCTTTCCTGCCTTTTTAAT
TACCAAACTACTCTCAGTTTTCAATGAATCAGTTCAAAGAAAGAATGCAGTCTTTCTATACCTGACTCAAGAATGAACAATCCGTCAGAA
ACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGTAGGA
GGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAGTTTACAGGCTGCTGCTCAG
TCTTTAAATGTACAGTCTAAATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGGCAGCC
ATTCCCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACAGTTACTACTCCAGCAGGCA
CAGGCACAGGCACAGCTGCTGGCTGCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAGTGCTGCTGGAGCCACCATCTCCGCCTCT
GCTGCCACGCCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGATCGCACAGGATCTTCAACAACTGCAACAGCTTCAACAGCAGAAT
CTCAACCTGCAACAGTTTGTGTTGGTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAG
GGTCTCCTGCAAGCGCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACC
TCCCAGCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACACCAAAGCGAATTGATACT
CCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAG
GGTGATGTTGGGCTCGCTATGGGGAAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACCTCAGCTTT
AAGAACATGTGCAAGTTGAAGCCACTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGTCCCTCTCCAGCCCAAGT
GCCCTGAATTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAG
AGTTTCTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAAAGAGGTGATTCGTGTTTGG
TTCTGTAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTATTAAAGCAATTTTCCCCAGC
CCAACTTCACTGGTGGCGACCACACCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCCTGTCCTCCCTCTGACCAGT
GCTGCTGTGACGAATCTTTCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTCCACAGCGCCTCCAGCTTCC
TCAGCAGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGCCAGTGAGACCAGCACAACA
CAGACCACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCAAACAGCAGCAGCTGCTGCC
CTTCAAGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCCAAGCCTGATGGCACCCTCA
CAGTTTGCGGCTGGAGGTGCCTTACTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCTAATGAGCAACAGTACACTG
GCAACTATTCAAGATGGAACCCCACTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGGAGGTTCTCTGCCTGATGCT
CAAAAGTGTACTTGTGGATTAGAGGGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCGGAATGAATGGTGATTTCCA
CATGATTTCCCTGCACAAAAATGTGGTTTTTATTCTTTAATTATGCATAGTTAATTAAATGTCAGACAAGCTGGTACAATAAGGTAACTA

>In-frame_ENST00000420254_ENST00000323947_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=693AA_start in transcript=162_stop in transcript=2243
MNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSLQAAAQSLNVQSKSNEESGDSQQPSQPSQQ
PSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQPIQIAQDLQQLQ
QLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQST
PKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDS
SLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPI
KAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSA
SETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPSLMAPSQFAAGGALLSLNPGTLSGALSPAL

--------------------------------------------------------------
>In-frame_ENST00000367862_ENST00000297668_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=5102nt_BP=2192nt
AAACTCCTCTGAGCAACTGAAGTTTCCTTATTCAGTTGAAGATTGCTATGGTGTAACAGAAGTTGTATTTTGCTTTTCCCCTTAATCCAC
TTTCCACCCTACGCAACCCCCCTCTTTTCGCTTAAGAACATACTGTAGATTTGTTAGAAATAGTAGTACCTTCTTTCCCCACCCCAAACT
GCTACCTGTTTCTTCCTTGTTTGGACTCTCTGCTCCTCTAGAAGATTTCACAGCAATGCTGGACTGCAGTGACTATGTTCTAGACTCAAG
AATGAACAATCCGTCAGAAACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAA
GCAGCCTGTGCCTGTAGGAGGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAG
TTTACAGGCTGCTGCTCAGTCTTTAAATGTACAGTCTAAATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCA
GCCTTCAGTGCAGGCAGCCATTCCCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACA
GTTACTACTCCAGCAGGCACAGGCACAGGCACAGCTGCTGGCTGCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAGTGCTGCTGG
AGCCACCATCTCCGCCTCTGCTGCCACGCCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGATCGCACAGGATCTTCAACAACTGCA
ACAGCTTCAACAGCAGAATCTCAACCTGCAACAGTTTGTGTTGGTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACA
GACGCCCCAGGGCCAGCAGGGTCTCCTGCAAGCGCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCA
GCCAAGCATCACCCTCACCTCCCAGCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAAC
ACCAAAGCGAATTGATACTCCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAAT
CAAACTTGGATTCACTCAGGGTGATGTTGGGCTCGCTATGGGGAAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGA
AGCCTTGAACCTCAGCTTTAAGAACATGTGCAAGTTGAAGCCACTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTC
GTCCCTCTCCAGCCCAAGTGCCCTGAATTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACAT
CCGTGTGGCCTTAGAGAAGAGTTTCTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAA
AGAGGTGATTCGTGTTTGGTTCTGTAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTAT
TAAAGCAATTTTCCCCAGCCCAACTTCACTGGTGGCGACCACACCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCC
TGTCCTCCCTCTGACCAGTGCTGCTGTGACGAATCTTTCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTC
CACAGCGCCTCCAGCTTCCTCAGCAGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGC
CAGTGAGACCAGCACAACACAGACCACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCA
AACAGCAGCAGCTGCTGCCCTTCAAGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCC
AAGCCTGATGGCACCCTCACAGTTTGCGGCTGGAGGTGCCTTACTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCT
AATGAGCAACAGTACACTGGCAACTATTCAAGATGGAACCCCACTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGG
AGGTTCTCTGCCTGATGCTCAAAAGTGTACTTGTGGATTAGAGGGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCG
GAATGAATGGACTAGTGACACAATAGTCCTTTCCCAAAAGGAGCACCTGCCAGTCACTCAGATTGTGATGACAGACGCAGGCCGACCACA
TTCCGAAGCAGCTTATACACTGGGGCCACTGCTCTGCCGCGGAGATCAGTCATTCTGGAATTCAGCTTCCTTCAACACTGAGACTTCATA
CCTTCATTTCCCTGCTTTCCACGGAGAACTCACTGCTGACGTGTGCTTCTTTTTTAAGACCACAGTTTCCTCCGGGGTGTTTATGGAGAA
CCTGGGGATCACAGATTTCATCAGGATTGAGCTGCGTGCTCCCACAGAAGTGACCTTTTCCTTCGATGTGGGGAATGGACCTTGTGAGGT
CACGGTGCAGTCACCCACTCCCTTTAATGACAATCAGTGGCACCACGTGAGGGCAGAGAGAAATGTTAAAGGAGCGTCTCTTCAAGTTGA
TCAGCTTCCTCAGAAGATGCAGCCTGCCCCTGCTGATGGGCACGTTCGTTTACAGCTCAACAGCCAGCTCTTCATTGGTGGAACGGCCAC
CAGACAGAGAGGCTTTCTAGGATGCATTCGGTCTCTGCAGTTGAACGGGGTGGCCCTGGATCTGGAAGAAAGAGCCACAGTGACGCCAGG
AGTGGAGCCAGGGTGTGCAGGACACTGCAGCACCTATGGACACTTGTGTCGCAATGGAGGGAGATGCAGAGAGAAACGCAGGGGGGTCAC
CTGTGACTGTGCCTTCTCAGCCTATGATGGGCCGTTCTGCTCCAATGAGATTTCCGCATATTTTGCAACTGGCTCCTCAATGACATACCA
TTTTCAAGAACATTACACTTTAAGTGAAAACTCCAGCTCTCTCGTTTCTTCATTACACAGAGATGTAACATTGACCAGAGAAATGATCAC
ACTGAGCTTCCGAACCACACGAACTCCGAGCTTATTGCTGTATGTGAGCTCTTTCTATGAGGAATACCTTTCAGTTATCCTCGCCAACAA
TGGAAGTTTGCAGATTAGGTACAAGCTAGATAGACATCAAAATCCTGATGCATTTACCTTTGATTTTAAAAACATGGCTGATGGGCAACT
TCACCAAGTGAAGATTAACAGAGAAGAAGCTGTGGTCATGGTAGAGGTTAACCAGAGCACAAAGAAACAAGTCATCTTGTCCTCAGGGAC
AGAATTCAACGCCGTCAAATCTCTCATATTGGGAAAGGTTTTAGAGGCTGCCGGCGCGGACCCGGACACAAGGCGGGCGGCGACTAGTGG
CTTCACTGGCTGCCTCTCGGCGGTGCGCTTCGGCCGCGCTGCTCCCCTGAAGGCGGCGCTGCGCCCCAGCGGCCCCTCCCGGGTCACCGT
CCGCGGCCACGTGGCCCCTATGGCCCGCTGCGCAGCGGGGGCGGCGTCCGGCTCCCCGGCGCGGGAACTGGCTCCCCGACTCGCGGGGGG
CGCAGGTCGTTCTGGACCAGCGGATGAGGGAGAGCCCTTGGTTAATGCAGACAGAAGAGACTCTGCTGTCATCGGAGGTGTGATAGCAGT
GGTGATATTTATTTTGCTTTGCATCACTGCCATAGCCATACGCATCTATCAACAGAGAAAGTTACGCAAAGAAAATGAGTCAAAAGTCTC
AAAAAAAGAAGAGTGCTAGGACAGCTCTAAACAGTGAGCTCGATGTGCAAAACGCAGTCCATGAAAACCAGAAAGAGCGAGTCTTCTGAT
TGGCAGCTGTGGCTGTCTCTATCATCGTGACTGTGGACTTCCCTGCTGTTGCCATCAGGGTGCACACAAGCAGGTGCAGTGCTGTCACCT
GGCTGAAGACCTGCAGCCTCGGAGCCTCTGGGAGGTCCCTTTCTCCCTCGGTGAAACACAGTCCTCCACATCAATTTCCAAACAATGAAT
TAGGTATGGCCATTCATCACTGTTCAGTAGTTTCCCCGTCCAAAGGCTCTCTTCCAAAACTGCAGTTTGATCTGTGTTAATAATTGTGGG
GTTTTAGATGAGAAAATGGCTATAAAGCTGTGGCCCTACTTTATTTTTTAAAAATGACAGAACTTTTGTTCAGATGTAAAAGACAAAATT
GCACTTTAATGTTTTTTGTTACTTGAAAACATATCTGGGATCCCTTTTTTTGGTCCTCTGCTGATATTTATAAAACAAGAAATGCTTCTT
GGACTACCTTCACTGGCATTTCCATAGTCCTGGAATCCAGAGCCAAGTGGCCTATCTAAAATTCACAGCCCTTTTATTCTCCTGTGTGAT
GGTTAATACAACACAGTTGAAGCCTGGAAACACTACCATTATTTTTGGTGTATTGCTTTTTCTAATTGACTGTTTTTAATGATTTTGATA
CATTTTAATGTTGAAATTAATATTGAATGTTAGCTATGAAATTTTAGTATTGAATTTTATAATGGAACAGAACATTGGTAGGTAACAAGA
TGCAAGAGGATGTCAATACAAGATTGTCTGCCTGTTTTTCTTTGTAATTTGTAATTACAGTTTTTGTAACTTGTGATTATGTTTTTAACT
AAATTTACCACCAGATACAAACAATACTTCTTACACAGAGTTATCCTTTATTTATATCATTAAGACGTGAATGAAACATCATCCTAACTT
ACTTCCCCAAGATATTGAGAGGTCATATCTGTTTTTCTTTATCATTCATTTCTTTTTCTAAAAGTTGTTACTGATATGCTTTTGATTTCC

>In-frame_ENST00000367862_ENST00000297668_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=1266AA_start in transcript=178_stop in transcript=3978
MLPVSSLFGLSAPLEDFTAMLDCSDYVLDSRMNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGT
SLQAAAQSLNVQSKSNEESGDSQQPSQPSQQPSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAA
GATISASAATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQS
QPSITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRF
EALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNME
KEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVI
STAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLN
PSLMAPSQFAAGGALLSLNPGTLSGALSPALMSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAG
RNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFME
NLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTA
TRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTY
HFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQ
LHQVKINREEAVVMVEVNQSTKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVT
VRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPADEGEPLVNADRRDSAVIGGVIAVVIFILLCITAIAIRIYQQRKLRKENESKV

--------------------------------------------------------------
>In-frame_ENST00000367862_ENST00000377656_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=3892nt_BP=2192nt
AAACTCCTCTGAGCAACTGAAGTTTCCTTATTCAGTTGAAGATTGCTATGGTGTAACAGAAGTTGTATTTTGCTTTTCCCCTTAATCCAC
TTTCCACCCTACGCAACCCCCCTCTTTTCGCTTAAGAACATACTGTAGATTTGTTAGAAATAGTAGTACCTTCTTTCCCCACCCCAAACT
GCTACCTGTTTCTTCCTTGTTTGGACTCTCTGCTCCTCTAGAAGATTTCACAGCAATGCTGGACTGCAGTGACTATGTTCTAGACTCAAG
AATGAACAATCCGTCAGAAACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAA
GCAGCCTGTGCCTGTAGGAGGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAG
TTTACAGGCTGCTGCTCAGTCTTTAAATGTACAGTCTAAATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCA
GCCTTCAGTGCAGGCAGCCATTCCCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACA
GTTACTACTCCAGCAGGCACAGGCACAGGCACAGCTGCTGGCTGCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAGTGCTGCTGG
AGCCACCATCTCCGCCTCTGCTGCCACGCCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGATCGCACAGGATCTTCAACAACTGCA
ACAGCTTCAACAGCAGAATCTCAACCTGCAACAGTTTGTGTTGGTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACA
GACGCCCCAGGGCCAGCAGGGTCTCCTGCAAGCGCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCA
GCCAAGCATCACCCTCACCTCCCAGCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAAC
ACCAAAGCGAATTGATACTCCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAAT
CAAACTTGGATTCACTCAGGGTGATGTTGGGCTCGCTATGGGGAAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGA
AGCCTTGAACCTCAGCTTTAAGAACATGTGCAAGTTGAAGCCACTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTC
GTCCCTCTCCAGCCCAAGTGCCCTGAATTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACAT
CCGTGTGGCCTTAGAGAAGAGTTTCTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAA
AGAGGTGATTCGTGTTTGGTTCTGTAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTAT
TAAAGCAATTTTCCCCAGCCCAACTTCACTGGTGGCGACCACACCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCC
TGTCCTCCCTCTGACCAGTGCTGCTGTGACGAATCTTTCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTC
CACAGCGCCTCCAGCTTCCTCAGCAGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGC
CAGTGAGACCAGCACAACACAGACCACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCA
AACAGCAGCAGCTGCTGCCCTTCAAGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCC
AAGCCTGATGGCACCCTCACAGTTTGCGGCTGGAGGTGCCTTACTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCT
AATGAGCAACAGTACACTGGCAACTATTCAAGATGGAACCCCACTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGG
AGGTTCTCTGCCTGATGCTCAAAAGTGTACTTGTGGATTAGAGGGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCG
GAATGAATGGACTAGTGACACAATAGTCCTTTCCCAAAAGGAGCACCTGCCAGTCACTCAGATTGTGATGACAGACGCAGGCCGACCACA
TTCCGAAGCAGCTTATACACTGGGGCCACTGCTCTGCCGCGGAGATCAGTCATTCTGGAATTCAGCTTCCTTCAACACTGAGACTTCATA
CCTTCATTTCCCTGCTTTCCACGGAGAACTCACTGCTGACGTGTGCTTCTTTTTTAAGACCACAGTTTCCTCCGGGGTGTTTATGGAGAA
CCTGGGGATCACAGATTTCATCAGGATTGAGCTGCGTGCTCCCACAGAAGTGACCTTTTCCTTCGATGTGGGGAATGGACCTTGTGAGGT
CACGGTGCAGTCACCCACTCCCTTTAATGACAATCAGTGGCACCACGTGAGGGCAGAGAGAAATGTTAAAGGAGCGTCTCTTCAAGTTGA
TCAGCTTCCTCAGAAGATGCAGCCTGCCCCTGCTGATGGGCACGTTCGTTTACAGCTCAACAGCCAGCTCTTCATTGAGATTTCCGCATA
TTTTGCAACTGGCTCCTCAATGACATACCATTTTCAAGAACATTACACTTTAAGTGAAAACTCCAGCTCTCTCGTTTCTTCATTACACAG
AGATGTAACATTGACCAGAGAAATGATCACACTGAGCTTCCGAACCACACGAACTCCGAGCTTATTGCTGTATGTGAGCTCTTTCTATGA
GGAATACCTTTCAGTTATCCTCGCCAACAATGGAAGTTTGCAGATTAGGTACAAGCTAGATAGACATCAAAATCCTGATGCATTTACCTT
TGATTTTAAAAACATGGCTGATGGGCAACTTCACCAAGTGAAGATTAACAGAGAAGAAGCTGTGGTCATGGTAGAGGTTAACCAGAGCAC
AAAGAAACAAGTCATCTTGTCCTCAGGGACAGAATTCAACGCCGTCAAATCTCTCATATTGGGAAAGGTTTTAGAGGCTGCCGGCGCGGA
CCCGGACACAAGGCGGGCGGCGACTAGTGGCTTCACTGGCTGCCTCTCGGCGGTGCGCTTCGGCCGCGCTGCTCCCCTGAAGGCGGCGCT
GCGCCCCAGCGGCCCCTCCCGGGTCACCGTCCGCGGCCACGTGGCCCCTATGGCCCGCTGCGCAGCGGGGGCGGCGTCCGGCTCCCCGGC
GCGGGAACTGGCTCCCCGACTCGCGGGGGGCGCAGGTCGTTCTGGACCAGCGGATGAGGGAGAGCCCTTGGTTAATGCAGACAGAAGAGA
CTCTGCTGTCATCGGAGGTGTGATAGCAGTGGTGATATTTATTTTGCTTTGCATCACTGCCATAGCCATACGCATCTATCAACAGAGAAA
GTTACGCAAAGAAAATGAGTCAAAAGTCTCAAAAAAAGAAGAGTGCTAGGACAGCTCTAAACAGTGAGCTCGATGTGCAAAACGCAGTCC
ATGAAAACCAGAAAGAGCGAGTCTTCTGATTGGCAGCTGTGGCTGTCTCTATCATCGTGACTGTGGACTTCCCTGCTGTTGCCATCAGGG

>In-frame_ENST00000367862_ENST00000377656_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=1186AA_start in transcript=178_stop in transcript=3738
MLPVSSLFGLSAPLEDFTAMLDCSDYVLDSRMNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGT
SLQAAAQSLNVQSKSNEESGDSQQPSQPSQQPSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAA
GATISASAATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQS
QPSITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRF
EALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNME
KEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVI
STAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLN
PSLMAPSQFAAGGALLSLNPGTLSGALSPALMSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAG
RNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFME
NLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIEISA
YFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFT
FDFKNMADGQLHQVKINREEAVVMVEVNQSTKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAA
LRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPADEGEPLVNADRRDSAVIGGVIAVVIFILLCITAIAIRIYQQR

--------------------------------------------------------------
>In-frame_ENST00000367862_ENST00000358144_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=5205nt_BP=2192nt
AAACTCCTCTGAGCAACTGAAGTTTCCTTATTCAGTTGAAGATTGCTATGGTGTAACAGAAGTTGTATTTTGCTTTTCCCCTTAATCCAC
TTTCCACCCTACGCAACCCCCCTCTTTTCGCTTAAGAACATACTGTAGATTTGTTAGAAATAGTAGTACCTTCTTTCCCCACCCCAAACT
GCTACCTGTTTCTTCCTTGTTTGGACTCTCTGCTCCTCTAGAAGATTTCACAGCAATGCTGGACTGCAGTGACTATGTTCTAGACTCAAG
AATGAACAATCCGTCAGAAACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAA
GCAGCCTGTGCCTGTAGGAGGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAG
TTTACAGGCTGCTGCTCAGTCTTTAAATGTACAGTCTAAATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCA
GCCTTCAGTGCAGGCAGCCATTCCCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACA
GTTACTACTCCAGCAGGCACAGGCACAGGCACAGCTGCTGGCTGCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAGTGCTGCTGG
AGCCACCATCTCCGCCTCTGCTGCCACGCCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGATCGCACAGGATCTTCAACAACTGCA
ACAGCTTCAACAGCAGAATCTCAACCTGCAACAGTTTGTGTTGGTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACA
GACGCCCCAGGGCCAGCAGGGTCTCCTGCAAGCGCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCA
GCCAAGCATCACCCTCACCTCCCAGCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAAC
ACCAAAGCGAATTGATACTCCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAAT
CAAACTTGGATTCACTCAGGGTGATGTTGGGCTCGCTATGGGGAAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGA
AGCCTTGAACCTCAGCTTTAAGAACATGTGCAAGTTGAAGCCACTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTC
GTCCCTCTCCAGCCCAAGTGCCCTGAATTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACAT
CCGTGTGGCCTTAGAGAAGAGTTTCTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAA
AGAGGTGATTCGTGTTTGGTTCTGTAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTAT
TAAAGCAATTTTCCCCAGCCCAACTTCACTGGTGGCGACCACACCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCC
TGTCCTCCCTCTGACCAGTGCTGCTGTGACGAATCTTTCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTC
CACAGCGCCTCCAGCTTCCTCAGCAGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGC
CAGTGAGACCAGCACAACACAGACCACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCA
AACAGCAGCAGCTGCTGCCCTTCAAGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCC
AAGCCTGATGGCACCCTCACAGTTTGCGGCTGGAGGTGCCTTACTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCT
AATGAGCAACAGTACACTGGCAACTATTCAAGATGGAACCCCACTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGG
AGGTTCTCTGCCTGATGCTCAAAAGTGTACTTGTGGATTAGAGGGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCG
GAATGAATGGACTAGTGACACAATAGTCCTTTCCCAAAAGGAGCACCTGCCAGTCACTCAGATTGTGATGACAGACGCAGGCCGACCACA
TTCCGAAGCAGCTTATACACTGGGGCCACTGCTCTGCCGCGGAGATCAGTCATTCTGGAATTCAGCTTCCTTCAACACTGAGACTTCATA
CCTTCATTTCCCTGCTTTCCACGGAGAACTCACTGCTGACGTGTGCTTCTTTTTTAAGACCACAGTTTCCTCCGGGGTGTTTATGGAGAA
CCTGGGGATCACAGATTTCATCAGGATTGAGCTGCGTGCTCCCACAGAAGTGACCTTTTCCTTCGATGTGGGGAATGGACCTTGTGAGGT
CACGGTGCAGTCACCCACTCCCTTTAATGACAATCAGTGGCACCACGTGAGGGCAGAGAGAAATGTTAAAGGAGCGTCTCTTCAAGTTGA
TCAGCTTCCTCAGAAGATGCAGCCTGCCCCTGCTGATGGGCACGTTCGTTTACAGCTCAACAGCCAGCTCTTCATTGGTGGAACGGCCAC
CAGACAGAGAGGCTTTCTAGGATGCATTCGGTCTCTGCAGTTGAACGGGGTGGCCCTGGATCTGGAAGAAAGAGCCACAGTGACGCCAGG
AGTGGAGCCAGGGTGTGCAGGACACTGCAGCACCTATGGACACTTGTGTCGCAATGGAGGGAGATGCAGAGAGAAACGCAGGGGGGTCAC
CTGTGACTGTGCCTTCTCAGCCTATGATGGGCCGTTCTGCTCCAATGAGATTTCCGCATATTTTGCAACTGGCTCCTCAATGACATACCA
TTTTCAAGAACATTACACTTTAAGTGAAAACTCCAGCTCTCTCGTTTCTTCATTACACAGAGATGTAACATTGACCAGAGAAATGATCAC
ACTGAGCTTCCGAACCACACGAACTCCGAGCTTATTGCTGTATGTGAGCTCTTTCTATGAGGAATACCTTTCAGTTATCCTCGCCAACAA
TGGAAGTTTGCAGATTAGGTACAAGCTAGATAGACATCAAAATCCTGATGCATTTACCTTTGATTTTAAAAACATGGCTGATGGGCAACT
TCACCAAGTGAAGATTAACAGAGAAGAAGCTGTGGTCATGGTAGAGGTAATCCCACAAATGCAAAAGTCAAACTAACTAATATTATTATT
TTAAGAACAAATAATCTAATGAAAAAATTTGATAATATTAATAGAAGAGCAACCCATTCAGTGCTGCTCTTCCATAAGTCAAGAAGAAGC
CAAATATGGCCAGGATCTGGGAGAGAGGAGGTGGTTGTTTATTCTGTATTGCTTTGTTTTGTTTGTTTAGCAATGCAATTCTGTCAAAGG
TATTATTAATATTTTACTATTTAAAATATCAAAATATCTATTTGTTTTACTTTACTCAATAGGGGAATGTTCTCTAGTTTATCATAGTGA
CTGCTGGTGGAATCTATTCATTGATACTGCAGTGGGAACTTGTCTTATTCTGATTATAAAAGAACAAATACTTTAGCAACTTAAAAACAC
GGTTTAAAAGCACACAACATAGTTATTAAAATGGGAATAAGTAAGAAAATAGACCTGAGTCACCACAGAGGAAGTAAATTACACATTGTC
ATCGGCATTGGAAGGAAAATATACTGTATAGAGAACAACAATGCTTGGTTTTATGTTTCAGATTTTCTCCACAGAATGAGTACATATTTA
AGTTTAAAACAACCAATTCCATCTTTTTCATGGATTCTGCCAATTATAGATCCTTCCATTATGAAGAAGAGTAAAGCCAGCAAGTGGGTA
CATCGTGGATAGAGTGGTAGCTGATGGCATCATAGGAATTGCTTATAAAATAGCTTCTCTTTCTAAATGATTAATTATTTGAAGGTGGCT
TCTTGAGCTTTTGTAATGGTACTTAAAAGTGATTTATTTTCATCTTTCCTTTCCTCATCTTCCTTTGCTTCCTTATCATTAAAATTGTAC
TTTCTGTTGATGTTTGCTTCTCATGGGACATCTAATAGGTTAACCAGAGCACAAAGAAACAAGTCATCTTGTCCTCAGGGACAGAATTCA
ACGCCGTCAAATCTCTCATATTGGGAAAGGTTTTAGGTAAGTAGGAGAAAGAGCTTTTTCCCAAATAAGTGTCATGTCACAAACTCTGGA
AGCATTCATCATGCTGAAAGAAGCTCCTTGTCTTACTTGAATAATAATTTCACAGTGAGTGACAATCAAGGTGCAAACTGTACTCTTGCC
TGAGTGTACATATAATCATGACTAAGTGCTACCTGTGAGATGTGCAAGGGCGTTCCTGGAAAAATACCTCCACACTTAACCTCTCACTTG
GCAATCATGCATAATGAATCACGGTATTTTTCTAATCCTTCTTGAAAAGTGAAATGTTGTCAAAGCTGACACGAAGTTCACAGATTATGT
ATGTATTAATCAACATCAACTCCGGAGACCATCATTCAATGATAAAACTACGTTTGAGTTGAACACAAGAGAAAAAACTGGTAATCTTAT
TACAGCAGATGAATACAGTTTTATTTTTCTCTCAAGCCCTGCTTTGCCTGTTGTTTCCATCCTTTTTGACTTTAGTATCTAACAGGAATG
GGGAGGCATATTCATAAATATCTGTTACGCAAGGTAGAAAGTTACAGTAATTGTCTATCATATTGTCTATCATAATCTGTTGTAAAAGCA
CAGTTAGCTTTACATTTAATAAAGGAACTGAGGAAAGTAATCTTTTTTTAAAAAAACCCATCTTATGTAACTCAATTAAGAAAATGAACT

>In-frame_ENST00000367862_ENST00000358144_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=1105AA_start in transcript=178_stop in transcript=3495
MLPVSSLFGLSAPLEDFTAMLDCSDYVLDSRMNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGT
SLQAAAQSLNVQSKSNEESGDSQQPSQPSQQPSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAA
GATISASAATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQS
QPSITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRF
EALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNME
KEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVI
STAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLN
PSLMAPSQFAAGGALLSLNPGTLSGALSPALMSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAG
RNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAYTLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFME
NLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTA
TRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTY
HFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQ

--------------------------------------------------------------
>In-frame_ENST00000367862_ENST00000323947_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(transcript)=2529nt_BP=2192nt
AAACTCCTCTGAGCAACTGAAGTTTCCTTATTCAGTTGAAGATTGCTATGGTGTAACAGAAGTTGTATTTTGCTTTTCCCCTTAATCCAC
TTTCCACCCTACGCAACCCCCCTCTTTTCGCTTAAGAACATACTGTAGATTTGTTAGAAATAGTAGTACCTTCTTTCCCCACCCCAAACT
GCTACCTGTTTCTTCCTTGTTTGGACTCTCTGCTCCTCTAGAAGATTTCACAGCAATGCTGGACTGCAGTGACTATGTTCTAGACTCAAG
AATGAACAATCCGTCAGAAACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGGCACACAAACCAATGGTCTGGACTTTCAGAA
GCAGCCTGTGCCTGTAGGAGGAGCAATCTCAACAGCCCAGGCGCAGGCTTTCCTTGGACATCTCCATCAGGTCCAACTCGCTGGAACAAG
TTTACAGGCTGCTGCTCAGTCTTTAAATGTACAGTCTAAATCTAATGAAGAATCGGGGGATTCGCAGCAGCCAAGCCAGCCTTCCCAGCA
GCCTTCAGTGCAGGCAGCCATTCCCCAGACCCAGCTTATGCTAGCTGGAGGACAGATAACTGGGCTTACTTTGACGCCTGCCCAGCAACA
GTTACTACTCCAGCAGGCACAGGCACAGGCACAGCTGCTGGCTGCTGCAGTGCAGCAGCACTCCGCCAGCCAGCAGCACAGTGCTGCTGG
AGCCACCATCTCCGCCTCTGCTGCCACGCCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGATCGCACAGGATCTTCAACAACTGCA
ACAGCTTCAACAGCAGAATCTCAACCTGCAACAGTTTGTGTTGGTGCATCCAACCACCAATTTGCAGCCAGCGCAGTTTATCATCTCACA
GACGCCCCAGGGCCAGCAGGGTCTCCTGCAAGCGCAAAATCTTCTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCA
GCCAAGCATCACCCTCACCTCCCAGCCAGCAACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAAC
ACCAAAGCGAATTGATACTCCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAGTTTGCCAAGACCTTCAAACAAAGACGAAT
CAAACTTGGATTCACTCAGGGTGATGTTGGGCTCGCTATGGGGAAACTATATGGAAATGACTTCAGCCAAACTACCATCTCTCGATTTGA
AGCCTTGAACCTCAGCTTTAAGAACATGTGCAAGTTGAAGCCACTTTTAGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTC
GTCCCTCTCCAGCCCAAGTGCCCTGAATTCTCCAGGAATTGAGGGCTTGAGCCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACAT
CCGTGTGGCCTTAGAGAAGAGTTTCTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACTATGATTGCTGATCAGCTCAATATGGAAAA
AGAGGTGATTCGTGTTTGGTTCTGTAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCAAGCAGTGGTGGGACCAGCAGCTCACCTAT
TAAAGCAATTTTCCCCAGCCCAACTTCACTGGTGGCGACCACACCAAGCCTTGTGACTAGCAGTGCAGCAACTACCCTCACAGTCAGCCC
TGTCCTCCCTCTGACCAGTGCTGCTGTGACGAATCTTTCAGTTACAGGCACTTCAGACACCACCTCCAACAACACAGCAACCGTGATTTC
CACAGCGCCTCCAGCTTCCTCAGCAGTCACGTCCCCCTCTCTGAGTCCCTCCCCTTCTGCCTCAGCCTCCACCTCCGAGGCATCCAGTGC
CAGTGAGACCAGCACAACACAGACCACCTCCACTCCTTTGTCCTCCCCTCTTGGGACCAGCCAGGTGATGGTGACAGCATCAGGTTTGCA
AACAGCAGCAGCTGCTGCCCTTCAAGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCCATGGCAGCTGCTGCAGGACTAAACCC
AAGCCTGATGGCACCCTCACAGTTTGCGGCTGGAGGTGCCTTACTCAGTCTGAATCCAGGGACCCTGAGCGGTGCTCTCAGCCCAGCTCT
AATGAGCAACAGTACACTGGCAACTATTCAAGATGGAACCCCACTGAGCTGGTGGGTTGGAAGAACCAATGAAACACACACTTCCTGGGG
AGGTTCTCTGCCTGATGCTCAAAAGTGTACTTGTGGATTAGAGGGGAACTGCATTGATTCTCAGTATTACTGCAACTGTGATGCTGGCCG
GAATGAATGGTGATTTCCACATGATTTCCCTGCACAAAAATGTGGTTTTTATTCTTTAATTATGCATAGTTAATTAAATGTCAGACAAGC
TGGTACAATAAGGTAACTAAAGTATGTTCAAGCAAGCTGAAATACAAGTTTTGATGAAATATGATCAGTTAATCTAAGGATTAAATTTTA

>In-frame_ENST00000367862_ENST00000323947_TCGA-CV-7418_POU2F1_chr1_167382351_+_CNTNAP3_chr9_39118256_length(amino acids)=724AA_start in transcript=178_stop in transcript=2352
MLPVSSLFGLSAPLEDFTAMLDCSDYVLDSRMNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGT
SLQAAAQSLNVQSKSNEESGDSQQPSQPSQQPSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAA
GATISASAATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQS
QPSITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRF
EALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNME
KEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVI
STAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLN
PSLMAPSQFAAGGALLSLNPGTLSGALSPALMSNSTLATIQDGTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAG

--------------------------------------------------------------

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Fusion Gene PPI Analysis for POU2F1-CNTNAP3


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for POU2F1-CNTNAP3


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for POU2F1-CNTNAP3


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource