|
Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:PPP1R21-WARS2 (FusionGDB2 ID:67469) |
Fusion Gene Summary for PPP1R21-WARS2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: PPP1R21-WARS2 | Fusion gene ID: 67469 | Hgene | Tgene | Gene symbol | PPP1R21 | WARS2 | Gene ID | 129285 | 10352 |
Gene name | protein phosphatase 1 regulatory subunit 21 | tryptophanyl tRNA synthetase 2, mitochondrial | |
Synonyms | CCDC128|KLRAQ1 | NEMMLAS|TrpRS|mtTrpRS | |
Cytomap | 2p16.3 | 1p12 | |
Type of gene | protein-coding | protein-coding | |
Description | protein phosphatase 1 regulatory subunit 21KLRAQ motif containing 1KLRAQ motif-containing protein 1coiled-coil domain containing 128coiled-coil domain-containing protein 128 | tryptophan--tRNA ligase, mitochondrial(Mt)TrpRStryptophan tRNA ligase 2, mitochondrial | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | Q6ZMI0 | . | |
Ensembl transtripts involved in fusion gene | ENST00000281394, ENST00000294952, ENST00000449090, ENST00000476199, | ENST00000369426, ENST00000235521, ENST00000537870, ENST00000497761, | |
Fusion gene scores | * DoF score | 12 X 11 X 5=660 | 5 X 2 X 5=50 |
# samples | 13 | 5 | |
** MAII score | log2(13/660*10)=-2.34395440121736 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/50*10)=0 | |
Context | PubMed: PPP1R21 [Title/Abstract] AND WARS2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | PPP1R21(48725874)-WARS2(119619230), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across PPP1R21 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across WARS2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-BH-A0B2-01A | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
ChimerDB4 | BRCA | TCGA-BH-A0B2-01A | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
Top |
Fusion Gene ORF analysis for PPP1R21-WARS2 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000281394 | ENST00000369426 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
In-frame | ENST00000281394 | ENST00000235521 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
5CDS-5UTR | ENST00000281394 | ENST00000537870 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
5CDS-intron | ENST00000281394 | ENST00000497761 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
In-frame | ENST00000294952 | ENST00000369426 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
In-frame | ENST00000294952 | ENST00000235521 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
5CDS-5UTR | ENST00000294952 | ENST00000537870 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
5CDS-intron | ENST00000294952 | ENST00000497761 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
In-frame | ENST00000449090 | ENST00000369426 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
In-frame | ENST00000449090 | ENST00000235521 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
5CDS-5UTR | ENST00000449090 | ENST00000537870 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
5CDS-intron | ENST00000449090 | ENST00000497761 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
intron-3CDS | ENST00000476199 | ENST00000369426 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
intron-3CDS | ENST00000476199 | ENST00000235521 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
intron-5UTR | ENST00000476199 | ENST00000537870 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
intron-intron | ENST00000476199 | ENST00000497761 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000281394 | PPP1R21 | chr2 | 48725874 | + | ENST00000369426 | WARS2 | chr1 | 119619230 | - | 4837 | 2120 | 164 | 2692 | 842 |
ENST00000281394 | PPP1R21 | chr2 | 48725874 | + | ENST00000235521 | WARS2 | chr1 | 119619230 | - | 4803 | 2120 | 164 | 3112 | 982 |
ENST00000294952 | PPP1R21 | chr2 | 48725874 | + | ENST00000369426 | WARS2 | chr1 | 119619230 | - | 4809 | 2092 | 136 | 2664 | 842 |
ENST00000294952 | PPP1R21 | chr2 | 48725874 | + | ENST00000235521 | WARS2 | chr1 | 119619230 | - | 4775 | 2092 | 136 | 3084 | 982 |
ENST00000449090 | PPP1R21 | chr2 | 48725874 | + | ENST00000369426 | WARS2 | chr1 | 119619230 | - | 4656 | 1939 | 76 | 2511 | 811 |
ENST00000449090 | PPP1R21 | chr2 | 48725874 | + | ENST00000235521 | WARS2 | chr1 | 119619230 | - | 4622 | 1939 | 76 | 2931 | 951 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000281394 | ENST00000369426 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - | 0.002103932 | 0.9978961 |
ENST00000281394 | ENST00000235521 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - | 0.001109615 | 0.99889046 |
ENST00000294952 | ENST00000369426 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - | 0.002144374 | 0.9978556 |
ENST00000294952 | ENST00000235521 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - | 0.001130723 | 0.99886924 |
ENST00000449090 | ENST00000369426 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - | 0.002243449 | 0.99775654 |
ENST00000449090 | ENST00000235521 | PPP1R21 | chr2 | 48725874 | + | WARS2 | chr1 | 119619230 | - | 0.00112206 | 0.99887794 |
Top |
Fusion Genomic Features for PPP1R21-WARS2 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
Top |
Fusion Protein Features for PPP1R21-WARS2 |
Go to FGviewer for the breakpoints of chr2:48725874-chr1:119619230 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
PPP1R21 | . |
FUNCTION: Putative regulator of protein phosphatase 1 (PP1) activity (PubMed:19389623). May play a role in the endosomal sorting process or in endosome maturation pathway (PubMed:30520571). {ECO:0000269|PubMed:30520571, ECO:0000305|PubMed:19389623}. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PPP1R21 | chr2:48725874 | chr1:119619230 | ENST00000281394 | + | 17 | 21 | 1_207 | 645.0 | 770.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PPP1R21 | chr2:48725874 | chr1:119619230 | ENST00000281394 | + | 17 | 21 | 556_607 | 645.0 | 770.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PPP1R21 | chr2:48725874 | chr1:119619230 | ENST00000294952 | + | 17 | 22 | 1_207 | 645.0 | 781.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PPP1R21 | chr2:48725874 | chr1:119619230 | ENST00000294952 | + | 17 | 22 | 556_607 | 645.0 | 781.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PPP1R21 | chr2:48725874 | chr1:119619230 | ENST00000449090 | + | 16 | 20 | 1_207 | 614.0 | 739.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PPP1R21 | chr2:48725874 | chr1:119619230 | ENST00000449090 | + | 16 | 20 | 556_607 | 614.0 | 739.0 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | WARS2 | chr2:48725874 | chr1:119619230 | ENST00000235521 | 0 | 6 | 179_181 | 30.0 | 361.0 | Nucleotide binding | ATP | |
Tgene | WARS2 | chr2:48725874 | chr1:119619230 | ENST00000235521 | 0 | 6 | 226_230 | 30.0 | 361.0 | Nucleotide binding | ATP | |
Tgene | WARS2 | chr2:48725874 | chr1:119619230 | ENST00000235521 | 0 | 6 | 48_51 | 30.0 | 361.0 | Nucleotide binding | ATP | |
Tgene | WARS2 | chr2:48725874 | chr1:119619230 | ENST00000369426 | 0 | 6 | 179_181 | 30.0 | 221.0 | Nucleotide binding | ATP | |
Tgene | WARS2 | chr2:48725874 | chr1:119619230 | ENST00000369426 | 0 | 6 | 226_230 | 30.0 | 221.0 | Nucleotide binding | ATP | |
Tgene | WARS2 | chr2:48725874 | chr1:119619230 | ENST00000369426 | 0 | 6 | 48_51 | 30.0 | 221.0 | Nucleotide binding | ATP |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PPP1R21 | chr2:48725874 | chr1:119619230 | ENST00000281394 | + | 17 | 21 | 693_742 | 645.0 | 770.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PPP1R21 | chr2:48725874 | chr1:119619230 | ENST00000294952 | + | 17 | 22 | 693_742 | 645.0 | 781.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | PPP1R21 | chr2:48725874 | chr1:119619230 | ENST00000449090 | + | 16 | 20 | 693_742 | 614.0 | 739.0 | Coiled coil | Ontology_term=ECO:0000255 |
Top |
Fusion Gene Sequence for PPP1R21-WARS2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000281394_ENST00000369426_TCGA-BH-A0B2-01A_PPP1R21_chr2_48725874_+_WARS2_chr1_119619230_length(transcript)=4837nt_BP=2120nt CCACCTTCCTCCCACCCCGGGAACCCGGAAGTGGAGGAGGAGGCGCGGCGGCGGCGGCGGCGGCGGCTGCGGTGGCCAAGCAGGCAGATA CTGCCTGACCCGTTCCCGGGAGCGTGTCTGGGTTTGGGGGCGGGAGACAGGCTGAGCCGCCTGGGCGGCCTGGCCTGTACGGGGCGGGGG AGGCCATGGCCTCGGCTGAGTTGCAGGGGAAGTACCAGAAGCTGGCTCAGGAGTACTCGAAGCTTCGGGCTCAGAATCAGGTTCTGAAAA AAGGTGTTGTGGATGAACAAGCAAATTCTGCAGCTTTAAAGGAGCAACTGAAAATGAAGGATCAGTCATTGAGAAAACTACAACAGGAAA TGGACAGTTTGACATTTCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTACTTCAAGATGAACTAGCTCTAAGTGAACCACGAGGCAAGA AAAACAAGAAAAGTGGAGAATCTTCTTCTCAGTTGAGTCAAGAGCAGAAGAGTGTCTTTGATGAAGATCTGCAAAAGAAGATAGAAGAGA ATGAACGGTTGCATATACAATTTTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGACTGGCCACTCTGGAGA CAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGGAAACCATTGAGAAGCTGCAGAACGACAAGGCTAAAC TAGAAGTGAAATCTCAGACTCTAGAAAAGGAAGCCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTCATG AAGATTTGTCAGGTAGATTAGAGGAATCCTTATCAATCATCAATGAAAAAGTACCTTTTAATGATACAAAATATAGTCAGTACAACGCTC TGAACGTTCCACTCCACAATAGGAGACACCAGCTGAAGATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGTTCAGGATCTTGTGACGG CTCTTCTAAACTTTCATACCTACACAGAACAGAGGATTCAAATTTTTCCTGTTGATTCTGCCATTGACACTATATCTCCATTGAATCAGA AGTTCTCACAATACCTTCATGAAAATGCGTCCTATGTCCGCCCTCTTGAGGAAGGAATGCTTCATTTATTTGAAAGTATCACTGAGGATA CTGTGACTGTCTTGGAGACAACTGTGAAATTGAAAACTTTTTCAGAACACTTAACCTCCTACATATGTTTTCTTAGGAAGATTCTTCCCT ATCAGTTAAAAAGTTTAGAAGAAGAATGTGAATCCTCTCTTTGCACATCTGCGTTAAGAGCCAGGAATCTAGAGCTGTCCCAGGACATGA AAAAAATGACAGCTGTGTTTGAGAAGCTGCAGACTTACATAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGGACAA ACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGATTTCATGACGTTATGAAAGATATTTCCAAACATTATAGTCAAAAAG CTGCAATAGAGCATGAACTTCCAACAGCAACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATCAGTAGTGGCATTAACAAATG GAGCAGGAAAGATTGCATCCTTCTTCAGCAACAATTTGGACTACTTCATTGCTTCACTGAGCTATGGACCTAAGGCAGCGAGTGGATTCA TTAGTCCTCTTTCAGCTGAATGCATGCTACAGTATAAGAAAAAAGCTGCTGCCTATATGAAGTCTTTGAGAAAGCCCCTCTTGGAGTCTG TGCCTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCAAGTTCAACAGAGTT TGGAAAAGATTTCTAAACTGGAGCAGGAAAAAGAACATTGGATGTTGGAAGCACAATTAGCCAAAATCAAGCTAGAGAAAGAAAACCAGC GAATTGCAGATAAGCTGAAGAATACAGGTAGTGCCCAGCTGGTTGGGCTGGCCCAGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAGG ATGAAGCCACAGCTAAGGCTGTGTTGGAGCCCATTCAGAGCACCAGTCTAAAAGACAGCAAGAAGCGAGTATTTTCCGGCATTCAACCTA CAGGAATCCTCCACCTGGGCAATTACCTGGGAGCCATTGAGAGCTGGGTGAGGTTACAGGATGAATATGACTCTGTATTATACAGCATTG TTGACCTCCACTCCATTACTGTCCCCCAAGACCCAGCTGTCCTTCGGCAGAGCATCCTGGACATGACTGCTGTTCTTCTTGCCTGTGGCA TAAACCCGGAAAAAAGCATCCTTTTCCAACAATCTCAGGTGTCTGAACACACACAATTAAGTTGGATCCTTTCCTGCATGGTCAGACTAC CTCGATTACAACATTTACATCAGTGGAAGGCAAAGACTACCAAGCAGAAGCACGATGGCACGGTGGGCCTGCTCACATACCCAGTACTCC AGGCAGCCGACATTCTGTTGTACAAGTCCACACACGTTCCTGTTGGGGAGGATCAAGTCCAGCACATGGAACTAGTTCAGGATCTAGCAC AAGGTTTCAACAAGAAGTATGGGGAGTTCTTTCCAGTGCCCGAGTCCATTCTCAGTATGTGTGTGTTGGTGTTTTTAACCTAGCATCCAT GAAGAAGGTAAAATCCCTACGTGATCCTTCTGCCAAAATGTCGAAATCAGACCCTGACAAACTGGCCACCGTCCGAATAACAGACAGCCC AGAGGAGATAGTGCAGAAATTCCGCAAGGCTGTGACAGACTTCACCTCGGAGGTCACCTATGACCCGGCTGGCCGCGCTGGCGTGTCCAA CATAGTGGCGGTGCATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGCATGAACACTGCTCGCTACAAGCT GGCCGTGGCAGATGCTGTGATTGAGAAGTTTGCCCCAATTAAGCGTGAAATTGAAAAACTGAAGCTGGACAAGGACCATTTAGAGAAGGT TTTACAAATTGGATCAGCAAAAGCCAAAGAATTAGCATACACTGTGTGCCAGGAGGTGAAGAAATTGGTGGGTTTTCTATAGGAAGTTTC AACGAATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAAAAGAAAAAGTTATAGTTTTGGGAC ATTTAATTTGGTATAGCTGATTATTGGCTTTATTTGATGAATATTGCTTTGTAGCTTTGAAATACGACAGTGTTCCAAATCCCATCAACA AAATGCTGTGAACAACAACAACAAAAAATAAATCAAGAAGGCATAGCTGTCTGAATCCCCAATTATTGAGGCACACTCCTTGGCCTGCAG AAATGTGATTGAAGTAAGGAGTAATTTGGGAAATGGAGTATCATTTGTGCTTCTCTCTGGAGTACTTACTGTAACAGATGCACACGTTAT CTACTTCAACCCTTTTATAAAGCAATATATAGAGGTCTTAGATGTATAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAG AGCTCATAAAAACAAGTCCATTCTTATAGTTTGTTTGTCACTGAGACGGTGCCTGATTTAATATATTTAAGCTGCTTAACTTGTTTTCCA AGAGATAACACCAACTGTTCCAGCAATAATTTGTTTTTTAATTCAGAGATATGGGATATGATCTTCTAAGGAGGTTGCATTATTTTGACC TGATTTATTTATTGTACAAGAGCCCAAGTCCCTGAATTATATTCTTAATAAGTGCTTTCTTGCATTCATTTCAGTTTAGTCTCACCAACC CCCTATGAATTAGGAGAATTATTGTCATTTTACACATGAGGAAAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGATATCACTCCATAA GAGAAGCAAATCTGAGAGTAAAACCCTTACCCCTTATTCTTAAGAATAGTGCTTGTTTATTCAGTACAAAAAAAATGCTGAAAGGCAGCG TTTTTTAGACTCTAAACATTCTGATTTTGAAGGTGGGTGTTGGAACGACTGATGATGTTTTTTATATCATCAATTCAGCCAATGGATGCG AACTTAAAATCTGGATTCACAGAACCGTGGTCACATTTCCCCATCAAAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTG CAGAAATACTTTGAAATAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAATGACTGACAGCTTCTCATCT TGCCTCTACCTCAGTTAAGTAATGTCACCCTGAAACCTAGCTTTTCTGCACTTCCATTTCTGACACCTGAAAATGAAAATGATAATCCTA ACTTATACACCAAGACCTGTTAGCAAGATCGATTTTGTAACAGAAATTGCTTATAAGTTTTTTATCAGTAAGGACCATGATCACCATTTG TACATACATAACTAGGTTGTTGAGCAAAGCATTTTTGCTCATGTTTCTTAAGGAAGTAGAGTAGTCCTTGTGTCAGAACACATGTTAATC CACAAAACGCCCCATCCCAGATTCCAAATTAAAACATCGTTTTTAGGATTCTTGGAGCTAGCCTGGATCATGGGTAAAGGAAACATTTTG CCTTTTGTATCTTATACTGGAATGGGATGTCTGTAAGTCCTAGAACCTCTTTGAGCATATTTCTTACAAGCCTCTGTTTTTTCCCCTTTA >In-frame_ENST00000281394_ENST00000369426_TCGA-BH-A0B2-01A_PPP1R21_chr2_48725874_+_WARS2_chr1_119619230_length(amino acids)=842AA_start in transcript=164_stop in transcript=2692 MYGAGEAMASAELQGKYQKLAQEYSKLRAQNQVLKKGVVDEQANSAALKEQLKMKDQSLRKLQQEMDSLTFRNLQLAKRVELLQDELALS EPRGKKNKKSGESSSQLSQEQKSVFDEDLQKKIEENERLHIQFFEADEQHKHVEAELRSRLATLETEAAQHQAVVDGLTRKYMETIEKLQ NDKAKLEVKSQTLEKEAKECRLRTEECQLQLKTLHEDLSGRLEESLSIINEKVPFNDTKYSQYNALNVPLHNRRHQLKMRDIAGQALAFV QDLVTALLNFHTYTEQRIQIFPVDSAIDTISPLNQKFSQYLHENASYVRPLEEGMLHLFESITEDTVTVLETTVKLKTFSEHLTSYICFL RKILPYQLKSLEEECESSLCTSALRARNLELSQDMKKMTAVFEKLQTYIALLALPSTEPDGLLRTNYSSVLTNVGAALHGFHDVMKDISK HYSQKAAIEHELPTATQKLITTNDCILSSVVALTNGAGKIASFFSNNLDYFIASLSYGPKAASGFISPLSAECMLQYKKKAAAYMKSLRK PLLESVPYEEALANRRILLSSTESREGLAQQVQQSLEKISKLEQEKEHWMLEAQLAKIKLEKENQRIADKLKNTGSAQLVGLAQENAAVS NTAGQDEATAKAVLEPIQSTSLKDSKKRVFSGIQPTGILHLGNYLGAIESWVRLQDEYDSVLYSIVDLHSITVPQDPAVLRQSILDMTAV LLACGINPEKSILFQQSQVSEHTQLSWILSCMVRLPRLQHLHQWKAKTTKQKHDGTVGLLTYPVLQAADILLYKSTHVPVGEDQVQHMEL -------------------------------------------------------------- >In-frame_ENST00000281394_ENST00000235521_TCGA-BH-A0B2-01A_PPP1R21_chr2_48725874_+_WARS2_chr1_119619230_length(transcript)=4803nt_BP=2120nt CCACCTTCCTCCCACCCCGGGAACCCGGAAGTGGAGGAGGAGGCGCGGCGGCGGCGGCGGCGGCGGCTGCGGTGGCCAAGCAGGCAGATA CTGCCTGACCCGTTCCCGGGAGCGTGTCTGGGTTTGGGGGCGGGAGACAGGCTGAGCCGCCTGGGCGGCCTGGCCTGTACGGGGCGGGGG AGGCCATGGCCTCGGCTGAGTTGCAGGGGAAGTACCAGAAGCTGGCTCAGGAGTACTCGAAGCTTCGGGCTCAGAATCAGGTTCTGAAAA AAGGTGTTGTGGATGAACAAGCAAATTCTGCAGCTTTAAAGGAGCAACTGAAAATGAAGGATCAGTCATTGAGAAAACTACAACAGGAAA TGGACAGTTTGACATTTCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTACTTCAAGATGAACTAGCTCTAAGTGAACCACGAGGCAAGA AAAACAAGAAAAGTGGAGAATCTTCTTCTCAGTTGAGTCAAGAGCAGAAGAGTGTCTTTGATGAAGATCTGCAAAAGAAGATAGAAGAGA ATGAACGGTTGCATATACAATTTTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGACTGGCCACTCTGGAGA CAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGGAAACCATTGAGAAGCTGCAGAACGACAAGGCTAAAC TAGAAGTGAAATCTCAGACTCTAGAAAAGGAAGCCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTCATG AAGATTTGTCAGGTAGATTAGAGGAATCCTTATCAATCATCAATGAAAAAGTACCTTTTAATGATACAAAATATAGTCAGTACAACGCTC TGAACGTTCCACTCCACAATAGGAGACACCAGCTGAAGATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGTTCAGGATCTTGTGACGG CTCTTCTAAACTTTCATACCTACACAGAACAGAGGATTCAAATTTTTCCTGTTGATTCTGCCATTGACACTATATCTCCATTGAATCAGA AGTTCTCACAATACCTTCATGAAAATGCGTCCTATGTCCGCCCTCTTGAGGAAGGAATGCTTCATTTATTTGAAAGTATCACTGAGGATA CTGTGACTGTCTTGGAGACAACTGTGAAATTGAAAACTTTTTCAGAACACTTAACCTCCTACATATGTTTTCTTAGGAAGATTCTTCCCT ATCAGTTAAAAAGTTTAGAAGAAGAATGTGAATCCTCTCTTTGCACATCTGCGTTAAGAGCCAGGAATCTAGAGCTGTCCCAGGACATGA AAAAAATGACAGCTGTGTTTGAGAAGCTGCAGACTTACATAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGGACAA ACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGATTTCATGACGTTATGAAAGATATTTCCAAACATTATAGTCAAAAAG CTGCAATAGAGCATGAACTTCCAACAGCAACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATCAGTAGTGGCATTAACAAATG GAGCAGGAAAGATTGCATCCTTCTTCAGCAACAATTTGGACTACTTCATTGCTTCACTGAGCTATGGACCTAAGGCAGCGAGTGGATTCA TTAGTCCTCTTTCAGCTGAATGCATGCTACAGTATAAGAAAAAAGCTGCTGCCTATATGAAGTCTTTGAGAAAGCCCCTCTTGGAGTCTG TGCCTTATGAAGAAGCACTGGCAAACCGCCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCAAGTTCAACAGAGTT TGGAAAAGATTTCTAAACTGGAGCAGGAAAAAGAACATTGGATGTTGGAAGCACAATTAGCCAAAATCAAGCTAGAGAAAGAAAACCAGC GAATTGCAGATAAGCTGAAGAATACAGGTAGTGCCCAGCTGGTTGGGCTGGCCCAGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAGG ATGAAGCCACAGCTAAGGCTGTGTTGGAGCCCATTCAGAGCACCAGTCTAAAAGACAGCAAGAAGCGAGTATTTTCCGGCATTCAACCTA CAGGAATCCTCCACCTGGGCAATTACCTGGGAGCCATTGAGAGCTGGGTGAGGTTACAGGATGAATATGACTCTGTATTATACAGCATTG TTGACCTCCACTCCATTACTGTCCCCCAAGACCCAGCTGTCCTTCGGCAGAGCATCCTGGACATGACTGCTGTTCTTCTTGCCTGTGGCA TAAACCCGGAAAAAAGCATCCTTTTCCAACAATCTCAGGTGTCTGAACACACACAATTAAGTTGGATCCTTTCCTGCATGGTCAGACTAC CTCGATTACAACATTTACATCAGTGGAAGGCAAAGACTACCAAGCAGAAGCACGATGGCACGGTGGGCCTGCTCACATACCCAGTACTCC AGGCAGCCGACATTCTGTTGTACAAGTCCACACACGTTCCTGTTGGGGAGGATCAAGTCCAGCACATGGAACTAGTTCAGGATCTAGCAC AAGGTTTCAACAAGAAGTATGGGGAGTTCTTTCCAGTGCCCGAGTCCATTCTCACATCCATGAAGAAGGTAAAATCCCTACGTGATCCTT CTGCCAAAATGTCGAAATCAGACCCTGACAAACTGGCCACCGTCCGAATAACAGACAGCCCAGAGGAGATAGTGCAGAAATTCCGCAAGG CTGTGACAGACTTCACCTCGGAGGTCACCTATGACCCGGCTGGCCGCGCTGGCGTGTCCAACATAGTGGCGGTGCATGCCGCGGTGACGG GGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGCATGAACACTGCTCGCTACAAGCTGGCCGTGGCAGATGCTGTGATTGAGAAGT TTGCCCCAATTAAGCGTGAAATTGAAAAACTGAAGCTGGACAAGGACCATTTAGAGAAGGTTTTACAAATTGGATCAGCAAAAGCCAAAG AATTAGCATACACTGTGTGCCAGGAGGTGAAGAAATTGGTGGGTTTTCTATAGGAAGTTTCAACGAATCACAGCAAGGCTTTTGTGCCTT GCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAAAAGAAAAAGTTATAGTTTTGGGACATTTAATTTGGTATAGCTGATTATTGGCT TTATTTGATGAATATTGCTTTGTAGCTTTGAAATACGACAGTGTTCCAAATCCCATCAACAAAATGCTGTGAACAACAACAACAAAAAAT AAATCAAGAAGGCATAGCTGTCTGAATCCCCAATTATTGAGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAGTAAGGAGTAATTTGG GAAATGGAGTATCATTTGTGCTTCTCTCTGGAGTACTTACTGTAACAGATGCACACGTTATCTACTTCAACCCTTTTATAAAGCAATATA TAGAGGTCTTAGATGTATAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCATAAAAACAAGTCCATTCTTATAG TTTGTTTGTCACTGAGACGGTGCCTGATTTAATATATTTAAGCTGCTTAACTTGTTTTCCAAGAGATAACACCAACTGTTCCAGCAATAA TTTGTTTTTTAATTCAGAGATATGGGATATGATCTTCTAAGGAGGTTGCATTATTTTGACCTGATTTATTTATTGTACAAGAGCCCAAGT CCCTGAATTATATTCTTAATAAGTGCTTTCTTGCATTCATTTCAGTTTAGTCTCACCAACCCCCTATGAATTAGGAGAATTATTGTCATT TTACACATGAGGAAAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGATATCACTCCATAAGAGAAGCAAATCTGAGAGTAAAACCCTTA CCCCTTATTCTTAAGAATAGTGCTTGTTTATTCAGTACAAAAAAAATGCTGAAAGGCAGCGTTTTTTAGACTCTAAACATTCTGATTTTG AAGGTGGGTGTTGGAACGACTGATGATGTTTTTTATATCATCAATTCAGCCAATGGATGCGAACTTAAAATCTGGATTCACAGAACCGTG GTCACATTTCCCCATCAAAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACTTTGAAATAGGTTCTGCCAG TCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAATGACTGACAGCTTCTCATCTTGCCTCTACCTCAGTTAAGTAATGTCACC CTGAAACCTAGCTTTTCTGCACTTCCATTTCTGACACCTGAAAATGAAAATGATAATCCTAACTTATACACCAAGACCTGTTAGCAAGAT CGATTTTGTAACAGAAATTGCTTATAAGTTTTTTATCAGTAAGGACCATGATCACCATTTGTACATACATAACTAGGTTGTTGAGCAAAG CATTTTTGCTCATGTTTCTTAAGGAAGTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCAGATTCCAAAT TAAAACATCGTTTTTAGGATTCTTGGAGCTAGCCTGGATCATGGGTAAAGGAAACATTTTGCCTTTTGTATCTTATACTGGAATGGGATG TCTGTAAGTCCTAGAACCTCTTTGAGCATATTTCTTACAAGCCTCTGTTTTTTCCCCTTTAAAGGAAACTTTGAAAGGATTGTGAATACT >In-frame_ENST00000281394_ENST00000235521_TCGA-BH-A0B2-01A_PPP1R21_chr2_48725874_+_WARS2_chr1_119619230_length(amino acids)=982AA_start in transcript=164_stop in transcript=3112 MYGAGEAMASAELQGKYQKLAQEYSKLRAQNQVLKKGVVDEQANSAALKEQLKMKDQSLRKLQQEMDSLTFRNLQLAKRVELLQDELALS EPRGKKNKKSGESSSQLSQEQKSVFDEDLQKKIEENERLHIQFFEADEQHKHVEAELRSRLATLETEAAQHQAVVDGLTRKYMETIEKLQ NDKAKLEVKSQTLEKEAKECRLRTEECQLQLKTLHEDLSGRLEESLSIINEKVPFNDTKYSQYNALNVPLHNRRHQLKMRDIAGQALAFV QDLVTALLNFHTYTEQRIQIFPVDSAIDTISPLNQKFSQYLHENASYVRPLEEGMLHLFESITEDTVTVLETTVKLKTFSEHLTSYICFL RKILPYQLKSLEEECESSLCTSALRARNLELSQDMKKMTAVFEKLQTYIALLALPSTEPDGLLRTNYSSVLTNVGAALHGFHDVMKDISK HYSQKAAIEHELPTATQKLITTNDCILSSVVALTNGAGKIASFFSNNLDYFIASLSYGPKAASGFISPLSAECMLQYKKKAAAYMKSLRK PLLESVPYEEALANRRILLSSTESREGLAQQVQQSLEKISKLEQEKEHWMLEAQLAKIKLEKENQRIADKLKNTGSAQLVGLAQENAAVS NTAGQDEATAKAVLEPIQSTSLKDSKKRVFSGIQPTGILHLGNYLGAIESWVRLQDEYDSVLYSIVDLHSITVPQDPAVLRQSILDMTAV LLACGINPEKSILFQQSQVSEHTQLSWILSCMVRLPRLQHLHQWKAKTTKQKHDGTVGLLTYPVLQAADILLYKSTHVPVGEDQVQHMEL VQDLAQGFNKKYGEFFPVPESILTSMKKVKSLRDPSAKMSKSDPDKLATVRITDSPEEIVQKFRKAVTDFTSEVTYDPAGRAGVSNIVAV -------------------------------------------------------------- >In-frame_ENST00000294952_ENST00000369426_TCGA-BH-A0B2-01A_PPP1R21_chr2_48725874_+_WARS2_chr1_119619230_length(transcript)=4809nt_BP=2092nt AAGTGGAGGAGGAGGCGCGGCGGCGGCGGCGGCGGCGGCTGCGGTGGCCAAGCAGGCAGATACTGCCTGACCCGTTCCCGGGAGCGTGTC TGGGTTTGGGGGCGGGAGACAGGCTGAGCCGCCTGGGCGGCCTGGCCTGTACGGGGCGGGGGAGGCCATGGCCTCGGCTGAGTTGCAGGG GAAGTACCAGAAGCTGGCTCAGGAGTACTCGAAGCTTCGGGCTCAGAATCAGGTTCTGAAAAAAGGTGTTGTGGATGAACAAGCAAATTC TGCAGCTTTAAAGGAGCAACTGAAAATGAAGGATCAGTCATTGAGAAAACTACAACAGGAAATGGACAGTTTGACATTTCGAAATCTGCA GCTTGCCAAGAGGGTAGAACTACTTCAAGATGAACTAGCTCTAAGTGAACCACGAGGCAAGAAAAACAAGAAAAGTGGAGAATCTTCTTC TCAGTTGAGTCAAGAGCAGAAGAGTGTCTTTGATGAAGATCTGCAAAAGAAGATAGAAGAGAATGAACGGTTGCATATACAATTTTTTGA AGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGACTGGCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCTGTGGT TGACGGTCTCACCCGGAAGTACATGGAAACCATTGAGAAGCTGCAGAACGACAAGGCTAAACTAGAAGTGAAATCTCAGACTCTAGAAAA GGAAGCCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTCATGAAGATTTGTCAGGTAGATTAGAGGAATC CTTATCAATCATCAATGAAAAAGTACCTTTTAATGATACAAAATATAGTCAGTACAACGCTCTGAACGTTCCACTCCACAATAGGAGACA CCAGCTGAAGATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGTTCAGGATCTTGTGACGGCTCTTCTAAACTTTCATACCTACACAGA ACAGAGGATTCAAATTTTTCCTGTTGATTCTGCCATTGACACTATATCTCCATTGAATCAGAAGTTCTCACAATACCTTCATGAAAATGC GTCCTATGTCCGCCCTCTTGAGGAAGGAATGCTTCATTTATTTGAAAGTATCACTGAGGATACTGTGACTGTCTTGGAGACAACTGTGAA ATTGAAAACTTTTTCAGAACACTTAACCTCCTACATATGTTTTCTTAGGAAGATTCTTCCCTATCAGTTAAAAAGTTTAGAAGAAGAATG TGAATCCTCTCTTTGCACATCTGCGTTAAGAGCCAGGAATCTAGAGCTGTCCCAGGACATGAAAAAAATGACAGCTGTGTTTGAGAAGCT GCAGACTTACATAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGGACAAACTACAGTTCTGTGTTAACAAATGTTGG TGCTGCTCTGCATGGATTTCATGACGTTATGAAAGATATTTCCAAACATTATAGTCAAAAAGCTGCAATAGAGCATGAACTTCCAACAGC AACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATCAGTAGTGGCATTAACAAATGGAGCAGGAAAGATTGCATCCTTCTTCAG CAACAATTTGGACTACTTCATTGCTTCACTGAGCTATGGACCTAAGGCAGCGAGTGGATTCATTAGTCCTCTTTCAGCTGAATGCATGCT ACAGTATAAGAAAAAAGCTGCTGCCTATATGAAGTCTTTGAGAAAGCCCCTCTTGGAGTCTGTGCCTTATGAAGAAGCACTGGCAAACCG CCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCAAGTTCAACAGAGTTTGGAAAAGATTTCTAAACTGGAGCAGGA AAAAGAACATTGGATGTTGGAAGCACAATTAGCCAAAATCAAGCTAGAGAAAGAAAACCAGCGAATTGCAGATAAGCTGAAGAATACAGG TAGTGCCCAGCTGGTTGGGCTGGCCCAGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAGGATGAAGCCACAGCTAAGGCTGTGTTGGA GCCCATTCAGAGCACCAGTCTAAAAGACAGCAAGAAGCGAGTATTTTCCGGCATTCAACCTACAGGAATCCTCCACCTGGGCAATTACCT GGGAGCCATTGAGAGCTGGGTGAGGTTACAGGATGAATATGACTCTGTATTATACAGCATTGTTGACCTCCACTCCATTACTGTCCCCCA AGACCCAGCTGTCCTTCGGCAGAGCATCCTGGACATGACTGCTGTTCTTCTTGCCTGTGGCATAAACCCGGAAAAAAGCATCCTTTTCCA ACAATCTCAGGTGTCTGAACACACACAATTAAGTTGGATCCTTTCCTGCATGGTCAGACTACCTCGATTACAACATTTACATCAGTGGAA GGCAAAGACTACCAAGCAGAAGCACGATGGCACGGTGGGCCTGCTCACATACCCAGTACTCCAGGCAGCCGACATTCTGTTGTACAAGTC CACACACGTTCCTGTTGGGGAGGATCAAGTCCAGCACATGGAACTAGTTCAGGATCTAGCACAAGGTTTCAACAAGAAGTATGGGGAGTT CTTTCCAGTGCCCGAGTCCATTCTCAGTATGTGTGTGTTGGTGTTTTTAACCTAGCATCCATGAAGAAGGTAAAATCCCTACGTGATCCT TCTGCCAAAATGTCGAAATCAGACCCTGACAAACTGGCCACCGTCCGAATAACAGACAGCCCAGAGGAGATAGTGCAGAAATTCCGCAAG GCTGTGACAGACTTCACCTCGGAGGTCACCTATGACCCGGCTGGCCGCGCTGGCGTGTCCAACATAGTGGCGGTGCATGCCGCGGTGACG GGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGCATGAACACTGCTCGCTACAAGCTGGCCGTGGCAGATGCTGTGATTGAGAAG TTTGCCCCAATTAAGCGTGAAATTGAAAAACTGAAGCTGGACAAGGACCATTTAGAGAAGGTTTTACAAATTGGATCAGCAAAAGCCAAA GAATTAGCATACACTGTGTGCCAGGAGGTGAAGAAATTGGTGGGTTTTCTATAGGAAGTTTCAACGAATCACAGCAAGGCTTTTGTGCCT TGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAAAAGAAAAAGTTATAGTTTTGGGACATTTAATTTGGTATAGCTGATTATTGGC TTTATTTGATGAATATTGCTTTGTAGCTTTGAAATACGACAGTGTTCCAAATCCCATCAACAAAATGCTGTGAACAACAACAACAAAAAA TAAATCAAGAAGGCATAGCTGTCTGAATCCCCAATTATTGAGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAGTAAGGAGTAATTTG GGAAATGGAGTATCATTTGTGCTTCTCTCTGGAGTACTTACTGTAACAGATGCACACGTTATCTACTTCAACCCTTTTATAAAGCAATAT ATAGAGGTCTTAGATGTATAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCATAAAAACAAGTCCATTCTTATA GTTTGTTTGTCACTGAGACGGTGCCTGATTTAATATATTTAAGCTGCTTAACTTGTTTTCCAAGAGATAACACCAACTGTTCCAGCAATA ATTTGTTTTTTAATTCAGAGATATGGGATATGATCTTCTAAGGAGGTTGCATTATTTTGACCTGATTTATTTATTGTACAAGAGCCCAAG TCCCTGAATTATATTCTTAATAAGTGCTTTCTTGCATTCATTTCAGTTTAGTCTCACCAACCCCCTATGAATTAGGAGAATTATTGTCAT TTTACACATGAGGAAAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGATATCACTCCATAAGAGAAGCAAATCTGAGAGTAAAACCCTT ACCCCTTATTCTTAAGAATAGTGCTTGTTTATTCAGTACAAAAAAAATGCTGAAAGGCAGCGTTTTTTAGACTCTAAACATTCTGATTTT GAAGGTGGGTGTTGGAACGACTGATGATGTTTTTTATATCATCAATTCAGCCAATGGATGCGAACTTAAAATCTGGATTCACAGAACCGT GGTCACATTTCCCCATCAAAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACTTTGAAATAGGTTCTGCCA GTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAATGACTGACAGCTTCTCATCTTGCCTCTACCTCAGTTAAGTAATGTCAC CCTGAAACCTAGCTTTTCTGCACTTCCATTTCTGACACCTGAAAATGAAAATGATAATCCTAACTTATACACCAAGACCTGTTAGCAAGA TCGATTTTGTAACAGAAATTGCTTATAAGTTTTTTATCAGTAAGGACCATGATCACCATTTGTACATACATAACTAGGTTGTTGAGCAAA GCATTTTTGCTCATGTTTCTTAAGGAAGTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCAGATTCCAAA TTAAAACATCGTTTTTAGGATTCTTGGAGCTAGCCTGGATCATGGGTAAAGGAAACATTTTGCCTTTTGTATCTTATACTGGAATGGGAT GTCTGTAAGTCCTAGAACCTCTTTGAGCATATTTCTTACAAGCCTCTGTTTTTTCCCCTTTAAAGGAAACTTTGAAAGGATTGTGAATAC >In-frame_ENST00000294952_ENST00000369426_TCGA-BH-A0B2-01A_PPP1R21_chr2_48725874_+_WARS2_chr1_119619230_length(amino acids)=842AA_start in transcript=136_stop in transcript=2664 MYGAGEAMASAELQGKYQKLAQEYSKLRAQNQVLKKGVVDEQANSAALKEQLKMKDQSLRKLQQEMDSLTFRNLQLAKRVELLQDELALS EPRGKKNKKSGESSSQLSQEQKSVFDEDLQKKIEENERLHIQFFEADEQHKHVEAELRSRLATLETEAAQHQAVVDGLTRKYMETIEKLQ NDKAKLEVKSQTLEKEAKECRLRTEECQLQLKTLHEDLSGRLEESLSIINEKVPFNDTKYSQYNALNVPLHNRRHQLKMRDIAGQALAFV QDLVTALLNFHTYTEQRIQIFPVDSAIDTISPLNQKFSQYLHENASYVRPLEEGMLHLFESITEDTVTVLETTVKLKTFSEHLTSYICFL RKILPYQLKSLEEECESSLCTSALRARNLELSQDMKKMTAVFEKLQTYIALLALPSTEPDGLLRTNYSSVLTNVGAALHGFHDVMKDISK HYSQKAAIEHELPTATQKLITTNDCILSSVVALTNGAGKIASFFSNNLDYFIASLSYGPKAASGFISPLSAECMLQYKKKAAAYMKSLRK PLLESVPYEEALANRRILLSSTESREGLAQQVQQSLEKISKLEQEKEHWMLEAQLAKIKLEKENQRIADKLKNTGSAQLVGLAQENAAVS NTAGQDEATAKAVLEPIQSTSLKDSKKRVFSGIQPTGILHLGNYLGAIESWVRLQDEYDSVLYSIVDLHSITVPQDPAVLRQSILDMTAV LLACGINPEKSILFQQSQVSEHTQLSWILSCMVRLPRLQHLHQWKAKTTKQKHDGTVGLLTYPVLQAADILLYKSTHVPVGEDQVQHMEL -------------------------------------------------------------- >In-frame_ENST00000294952_ENST00000235521_TCGA-BH-A0B2-01A_PPP1R21_chr2_48725874_+_WARS2_chr1_119619230_length(transcript)=4775nt_BP=2092nt AAGTGGAGGAGGAGGCGCGGCGGCGGCGGCGGCGGCGGCTGCGGTGGCCAAGCAGGCAGATACTGCCTGACCCGTTCCCGGGAGCGTGTC TGGGTTTGGGGGCGGGAGACAGGCTGAGCCGCCTGGGCGGCCTGGCCTGTACGGGGCGGGGGAGGCCATGGCCTCGGCTGAGTTGCAGGG GAAGTACCAGAAGCTGGCTCAGGAGTACTCGAAGCTTCGGGCTCAGAATCAGGTTCTGAAAAAAGGTGTTGTGGATGAACAAGCAAATTC TGCAGCTTTAAAGGAGCAACTGAAAATGAAGGATCAGTCATTGAGAAAACTACAACAGGAAATGGACAGTTTGACATTTCGAAATCTGCA GCTTGCCAAGAGGGTAGAACTACTTCAAGATGAACTAGCTCTAAGTGAACCACGAGGCAAGAAAAACAAGAAAAGTGGAGAATCTTCTTC TCAGTTGAGTCAAGAGCAGAAGAGTGTCTTTGATGAAGATCTGCAAAAGAAGATAGAAGAGAATGAACGGTTGCATATACAATTTTTTGA AGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGACTGGCCACTCTGGAGACAGAAGCAGCCCAGCACCAAGCTGTGGT TGACGGTCTCACCCGGAAGTACATGGAAACCATTGAGAAGCTGCAGAACGACAAGGCTAAACTAGAAGTGAAATCTCAGACTCTAGAAAA GGAAGCCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTCATGAAGATTTGTCAGGTAGATTAGAGGAATC CTTATCAATCATCAATGAAAAAGTACCTTTTAATGATACAAAATATAGTCAGTACAACGCTCTGAACGTTCCACTCCACAATAGGAGACA CCAGCTGAAGATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGTTCAGGATCTTGTGACGGCTCTTCTAAACTTTCATACCTACACAGA ACAGAGGATTCAAATTTTTCCTGTTGATTCTGCCATTGACACTATATCTCCATTGAATCAGAAGTTCTCACAATACCTTCATGAAAATGC GTCCTATGTCCGCCCTCTTGAGGAAGGAATGCTTCATTTATTTGAAAGTATCACTGAGGATACTGTGACTGTCTTGGAGACAACTGTGAA ATTGAAAACTTTTTCAGAACACTTAACCTCCTACATATGTTTTCTTAGGAAGATTCTTCCCTATCAGTTAAAAAGTTTAGAAGAAGAATG TGAATCCTCTCTTTGCACATCTGCGTTAAGAGCCAGGAATCTAGAGCTGTCCCAGGACATGAAAAAAATGACAGCTGTGTTTGAGAAGCT GCAGACTTACATAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGGACAAACTACAGTTCTGTGTTAACAAATGTTGG TGCTGCTCTGCATGGATTTCATGACGTTATGAAAGATATTTCCAAACATTATAGTCAAAAAGCTGCAATAGAGCATGAACTTCCAACAGC AACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATCAGTAGTGGCATTAACAAATGGAGCAGGAAAGATTGCATCCTTCTTCAG CAACAATTTGGACTACTTCATTGCTTCACTGAGCTATGGACCTAAGGCAGCGAGTGGATTCATTAGTCCTCTTTCAGCTGAATGCATGCT ACAGTATAAGAAAAAAGCTGCTGCCTATATGAAGTCTTTGAGAAAGCCCCTCTTGGAGTCTGTGCCTTATGAAGAAGCACTGGCAAACCG CCGCATCCTTCTCAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAGCAAGTTCAACAGAGTTTGGAAAAGATTTCTAAACTGGAGCAGGA AAAAGAACATTGGATGTTGGAAGCACAATTAGCCAAAATCAAGCTAGAGAAAGAAAACCAGCGAATTGCAGATAAGCTGAAGAATACAGG TAGTGCCCAGCTGGTTGGGCTGGCCCAGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAGGATGAAGCCACAGCTAAGGCTGTGTTGGA GCCCATTCAGAGCACCAGTCTAAAAGACAGCAAGAAGCGAGTATTTTCCGGCATTCAACCTACAGGAATCCTCCACCTGGGCAATTACCT GGGAGCCATTGAGAGCTGGGTGAGGTTACAGGATGAATATGACTCTGTATTATACAGCATTGTTGACCTCCACTCCATTACTGTCCCCCA AGACCCAGCTGTCCTTCGGCAGAGCATCCTGGACATGACTGCTGTTCTTCTTGCCTGTGGCATAAACCCGGAAAAAAGCATCCTTTTCCA ACAATCTCAGGTGTCTGAACACACACAATTAAGTTGGATCCTTTCCTGCATGGTCAGACTACCTCGATTACAACATTTACATCAGTGGAA GGCAAAGACTACCAAGCAGAAGCACGATGGCACGGTGGGCCTGCTCACATACCCAGTACTCCAGGCAGCCGACATTCTGTTGTACAAGTC CACACACGTTCCTGTTGGGGAGGATCAAGTCCAGCACATGGAACTAGTTCAGGATCTAGCACAAGGTTTCAACAAGAAGTATGGGGAGTT CTTTCCAGTGCCCGAGTCCATTCTCACATCCATGAAGAAGGTAAAATCCCTACGTGATCCTTCTGCCAAAATGTCGAAATCAGACCCTGA CAAACTGGCCACCGTCCGAATAACAGACAGCCCAGAGGAGATAGTGCAGAAATTCCGCAAGGCTGTGACAGACTTCACCTCGGAGGTCAC CTATGACCCGGCTGGCCGCGCTGGCGTGTCCAACATAGTGGCGGTGCATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCG CAGCGCGGGCATGAACACTGCTCGCTACAAGCTGGCCGTGGCAGATGCTGTGATTGAGAAGTTTGCCCCAATTAAGCGTGAAATTGAAAA ACTGAAGCTGGACAAGGACCATTTAGAGAAGGTTTTACAAATTGGATCAGCAAAAGCCAAAGAATTAGCATACACTGTGTGCCAGGAGGT GAAGAAATTGGTGGGTTTTCTATAGGAAGTTTCAACGAATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGC TTTCCTAAAAAGAAAAAGTTATAGTTTTGGGACATTTAATTTGGTATAGCTGATTATTGGCTTTATTTGATGAATATTGCTTTGTAGCTT TGAAATACGACAGTGTTCCAAATCCCATCAACAAAATGCTGTGAACAACAACAACAAAAAATAAATCAAGAAGGCATAGCTGTCTGAATC CCCAATTATTGAGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAGTAAGGAGTAATTTGGGAAATGGAGTATCATTTGTGCTTCTCTC TGGAGTACTTACTGTAACAGATGCACACGTTATCTACTTCAACCCTTTTATAAAGCAATATATAGAGGTCTTAGATGTATAATCCTTGAG ATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCATAAAAACAAGTCCATTCTTATAGTTTGTTTGTCACTGAGACGGTGCCTGAT TTAATATATTTAAGCTGCTTAACTTGTTTTCCAAGAGATAACACCAACTGTTCCAGCAATAATTTGTTTTTTAATTCAGAGATATGGGAT ATGATCTTCTAAGGAGGTTGCATTATTTTGACCTGATTTATTTATTGTACAAGAGCCCAAGTCCCTGAATTATATTCTTAATAAGTGCTT TCTTGCATTCATTTCAGTTTAGTCTCACCAACCCCCTATGAATTAGGAGAATTATTGTCATTTTACACATGAGGAAAGTGAGGCTGAGAG AATCCAATTAGCTTGTACGATATCACTCCATAAGAGAAGCAAATCTGAGAGTAAAACCCTTACCCCTTATTCTTAAGAATAGTGCTTGTT TATTCAGTACAAAAAAAATGCTGAAAGGCAGCGTTTTTTAGACTCTAAACATTCTGATTTTGAAGGTGGGTGTTGGAACGACTGATGATG TTTTTTATATCATCAATTCAGCCAATGGATGCGAACTTAAAATCTGGATTCACAGAACCGTGGTCACATTTCCCCATCAAAATCCCCAAG GCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACTTTGAAATAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAAT CAGATATTCCCAATGACTGACAGCTTCTCATCTTGCCTCTACCTCAGTTAAGTAATGTCACCCTGAAACCTAGCTTTTCTGCACTTCCAT TTCTGACACCTGAAAATGAAAATGATAATCCTAACTTATACACCAAGACCTGTTAGCAAGATCGATTTTGTAACAGAAATTGCTTATAAG TTTTTTATCAGTAAGGACCATGATCACCATTTGTACATACATAACTAGGTTGTTGAGCAAAGCATTTTTGCTCATGTTTCTTAAGGAAGT AGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCAGATTCCAAATTAAAACATCGTTTTTAGGATTCTTGGAG CTAGCCTGGATCATGGGTAAAGGAAACATTTTGCCTTTTGTATCTTATACTGGAATGGGATGTCTGTAAGTCCTAGAACCTCTTTGAGCA TATTTCTTACAAGCCTCTGTTTTTTCCCCTTTAAAGGAAACTTTGAAAGGATTGTGAATACTGGAAAATGACAAAACTAAAGGTAGATCT >In-frame_ENST00000294952_ENST00000235521_TCGA-BH-A0B2-01A_PPP1R21_chr2_48725874_+_WARS2_chr1_119619230_length(amino acids)=982AA_start in transcript=136_stop in transcript=3084 MYGAGEAMASAELQGKYQKLAQEYSKLRAQNQVLKKGVVDEQANSAALKEQLKMKDQSLRKLQQEMDSLTFRNLQLAKRVELLQDELALS EPRGKKNKKSGESSSQLSQEQKSVFDEDLQKKIEENERLHIQFFEADEQHKHVEAELRSRLATLETEAAQHQAVVDGLTRKYMETIEKLQ NDKAKLEVKSQTLEKEAKECRLRTEECQLQLKTLHEDLSGRLEESLSIINEKVPFNDTKYSQYNALNVPLHNRRHQLKMRDIAGQALAFV QDLVTALLNFHTYTEQRIQIFPVDSAIDTISPLNQKFSQYLHENASYVRPLEEGMLHLFESITEDTVTVLETTVKLKTFSEHLTSYICFL RKILPYQLKSLEEECESSLCTSALRARNLELSQDMKKMTAVFEKLQTYIALLALPSTEPDGLLRTNYSSVLTNVGAALHGFHDVMKDISK HYSQKAAIEHELPTATQKLITTNDCILSSVVALTNGAGKIASFFSNNLDYFIASLSYGPKAASGFISPLSAECMLQYKKKAAAYMKSLRK PLLESVPYEEALANRRILLSSTESREGLAQQVQQSLEKISKLEQEKEHWMLEAQLAKIKLEKENQRIADKLKNTGSAQLVGLAQENAAVS NTAGQDEATAKAVLEPIQSTSLKDSKKRVFSGIQPTGILHLGNYLGAIESWVRLQDEYDSVLYSIVDLHSITVPQDPAVLRQSILDMTAV LLACGINPEKSILFQQSQVSEHTQLSWILSCMVRLPRLQHLHQWKAKTTKQKHDGTVGLLTYPVLQAADILLYKSTHVPVGEDQVQHMEL VQDLAQGFNKKYGEFFPVPESILTSMKKVKSLRDPSAKMSKSDPDKLATVRITDSPEEIVQKFRKAVTDFTSEVTYDPAGRAGVSNIVAV -------------------------------------------------------------- >In-frame_ENST00000449090_ENST00000369426_TCGA-BH-A0B2-01A_PPP1R21_chr2_48725874_+_WARS2_chr1_119619230_length(transcript)=4656nt_BP=1939nt TACTGCCTGACCCGTTCCCGGGAGCGTGTCTGGGTTTGGGGGCGGGAGACAGGCTGAGCCGCCTGGGCGGCCTGGCCTGTACGGGGCGGG GGAGGCCATGGCCTCGGCTGAGTTGCAGGGGAAGTACCAGAAGCTGGCTCAGGAGTACTCGAAGCTTCGGGCTCAGAATCAGGTTCTGAA AAAAGGTGTTGTGGATGAACAAGCAAATTCTGCAGCTTTAAAGGAGCAACTGAAAATGAAGGATCAGTCATTGAGAAAACTACAACAGGA AATGGACAGTTTGACATTTCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTACTTCAAGATGAACTAGCTCTAAGTGAACCACGAGGCAA GAAAAACAAGAAAAGTGGAGAATCTTCTTCTCAGTTGAGTCAAGAGCAGAAGAGTGTCTTTGATGAAGATCTGCAAAAGAAGATAGAAGA GAATGAACGGTTGCATATACAATTTTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGACTGGCCACTCTGGA GACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGGAAACCATTGAGAAGCTGCAGAACGACAAGGCTAA ACTAGAAGTGAAATCTCAGACTCTAGAAAAGGAAGCCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTCA TGAAGATTTGTCAGGTAGATTAGAGGAATCCTTATCAATCATCAATGAAAAAGTACCTTTTAATGATACAAAATATAGTCAGTACAACGC TCTGAACGTTCCACTCCACAATAGGAGACACCAGCTGAAGATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGTTCAGGATCTTGTGAC GGCTCTTCTAAACTTTCATACCTACACAGAACAGAGGATTCAAATTTTTCCTGTTGATTCTGCCATTGACACTATATCTCCATTGAATCA GAAGTTCTCACAATACCTTCATGAAAATGCGTCCTATGTCCGCCCTCTTGAGGAAGGAATGCTTCATTTATTTGAAAGTATCACTGAGGA TACTGTGACTGTCTTGGAGACAACTGTGAAATTGAAAACTTTTTCAGAACACTTAACCTCCTACATATGTTTTCTTAGGAAGATTCTTCC CTATCAGTTAAAAAGTTTAGAAGAAGAATGTGAATCCTCTCTTTGCACATCTGCGTTAAGAGCCAGGAATCTAGAGCTGTCCCAGGACAT GAAAAAAATGACAGCTGTGTTTGAGAAGCTGCAGACTTACATAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGGAC AAACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGATTTCATGACGTTATGAAAGATATTTCCAAACATTATAGTCAAAA AGCTGCAATAGAGCATGAACTTCCAACAGCAACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATCAGTAGTGGCATTAACAAA TGGAGCAGGAAAGATTGCATCCTTCTTCAGCAACAATTTGGACTACTTCATTGCTTCACTGAGCTATGGACCTAAGGCAGCGAGTGGATT CATTAGTCCTCTTTCAGCTGAATGCATGCTACAGTATAAGAAAAAAGCTGCTGCCTATATGAAGTCTTTGAGAAAGGTTCAACAGAGTTT GGAAAAGATTTCTAAACTGGAGCAGGAAAAAGAACATTGGATGTTGGAAGCACAATTAGCCAAAATCAAGCTAGAGAAAGAAAACCAGCG AATTGCAGATAAGCTGAAGAATACAGGTAGTGCCCAGCTGGTTGGGCTGGCCCAGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAGGA TGAAGCCACAGCTAAGGCTGTGTTGGAGCCCATTCAGAGCACCAGTCTAAAAGACAGCAAGAAGCGAGTATTTTCCGGCATTCAACCTAC AGGAATCCTCCACCTGGGCAATTACCTGGGAGCCATTGAGAGCTGGGTGAGGTTACAGGATGAATATGACTCTGTATTATACAGCATTGT TGACCTCCACTCCATTACTGTCCCCCAAGACCCAGCTGTCCTTCGGCAGAGCATCCTGGACATGACTGCTGTTCTTCTTGCCTGTGGCAT AAACCCGGAAAAAAGCATCCTTTTCCAACAATCTCAGGTGTCTGAACACACACAATTAAGTTGGATCCTTTCCTGCATGGTCAGACTACC TCGATTACAACATTTACATCAGTGGAAGGCAAAGACTACCAAGCAGAAGCACGATGGCACGGTGGGCCTGCTCACATACCCAGTACTCCA GGCAGCCGACATTCTGTTGTACAAGTCCACACACGTTCCTGTTGGGGAGGATCAAGTCCAGCACATGGAACTAGTTCAGGATCTAGCACA AGGTTTCAACAAGAAGTATGGGGAGTTCTTTCCAGTGCCCGAGTCCATTCTCAGTATGTGTGTGTTGGTGTTTTTAACCTAGCATCCATG AAGAAGGTAAAATCCCTACGTGATCCTTCTGCCAAAATGTCGAAATCAGACCCTGACAAACTGGCCACCGTCCGAATAACAGACAGCCCA GAGGAGATAGTGCAGAAATTCCGCAAGGCTGTGACAGACTTCACCTCGGAGGTCACCTATGACCCGGCTGGCCGCGCTGGCGTGTCCAAC ATAGTGGCGGTGCATGCCGCGGTGACGGGGCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGCATGAACACTGCTCGCTACAAGCTG GCCGTGGCAGATGCTGTGATTGAGAAGTTTGCCCCAATTAAGCGTGAAATTGAAAAACTGAAGCTGGACAAGGACCATTTAGAGAAGGTT TTACAAATTGGATCAGCAAAAGCCAAAGAATTAGCATACACTGTGTGCCAGGAGGTGAAGAAATTGGTGGGTTTTCTATAGGAAGTTTCA ACGAATCACAGCAAGGCTTTTGTGCCTTGCACTCCATGCATTCTGATAACGGCAGCTTTCCTAAAAAGAAAAAGTTATAGTTTTGGGACA TTTAATTTGGTATAGCTGATTATTGGCTTTATTTGATGAATATTGCTTTGTAGCTTTGAAATACGACAGTGTTCCAAATCCCATCAACAA AATGCTGTGAACAACAACAACAAAAAATAAATCAAGAAGGCATAGCTGTCTGAATCCCCAATTATTGAGGCACACTCCTTGGCCTGCAGA AATGTGATTGAAGTAAGGAGTAATTTGGGAAATGGAGTATCATTTGTGCTTCTCTCTGGAGTACTTACTGTAACAGATGCACACGTTATC TACTTCAACCCTTTTATAAAGCAATATATAGAGGTCTTAGATGTATAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGA GCTCATAAAAACAAGTCCATTCTTATAGTTTGTTTGTCACTGAGACGGTGCCTGATTTAATATATTTAAGCTGCTTAACTTGTTTTCCAA GAGATAACACCAACTGTTCCAGCAATAATTTGTTTTTTAATTCAGAGATATGGGATATGATCTTCTAAGGAGGTTGCATTATTTTGACCT GATTTATTTATTGTACAAGAGCCCAAGTCCCTGAATTATATTCTTAATAAGTGCTTTCTTGCATTCATTTCAGTTTAGTCTCACCAACCC CCTATGAATTAGGAGAATTATTGTCATTTTACACATGAGGAAAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGATATCACTCCATAAG AGAAGCAAATCTGAGAGTAAAACCCTTACCCCTTATTCTTAAGAATAGTGCTTGTTTATTCAGTACAAAAAAAATGCTGAAAGGCAGCGT TTTTTAGACTCTAAACATTCTGATTTTGAAGGTGGGTGTTGGAACGACTGATGATGTTTTTTATATCATCAATTCAGCCAATGGATGCGA ACTTAAAATCTGGATTCACAGAACCGTGGTCACATTTCCCCATCAAAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGC AGAAATACTTTGAAATAGGTTCTGCCAGTCTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAATGACTGACAGCTTCTCATCTT GCCTCTACCTCAGTTAAGTAATGTCACCCTGAAACCTAGCTTTTCTGCACTTCCATTTCTGACACCTGAAAATGAAAATGATAATCCTAA CTTATACACCAAGACCTGTTAGCAAGATCGATTTTGTAACAGAAATTGCTTATAAGTTTTTTATCAGTAAGGACCATGATCACCATTTGT ACATACATAACTAGGTTGTTGAGCAAAGCATTTTTGCTCATGTTTCTTAAGGAAGTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCC ACAAAACGCCCCATCCCAGATTCCAAATTAAAACATCGTTTTTAGGATTCTTGGAGCTAGCCTGGATCATGGGTAAAGGAAACATTTTGC CTTTTGTATCTTATACTGGAATGGGATGTCTGTAAGTCCTAGAACCTCTTTGAGCATATTTCTTACAAGCCTCTGTTTTTTCCCCTTTAA >In-frame_ENST00000449090_ENST00000369426_TCGA-BH-A0B2-01A_PPP1R21_chr2_48725874_+_WARS2_chr1_119619230_length(amino acids)=811AA_start in transcript=76_stop in transcript=2511 MYGAGEAMASAELQGKYQKLAQEYSKLRAQNQVLKKGVVDEQANSAALKEQLKMKDQSLRKLQQEMDSLTFRNLQLAKRVELLQDELALS EPRGKKNKKSGESSSQLSQEQKSVFDEDLQKKIEENERLHIQFFEADEQHKHVEAELRSRLATLETEAAQHQAVVDGLTRKYMETIEKLQ NDKAKLEVKSQTLEKEAKECRLRTEECQLQLKTLHEDLSGRLEESLSIINEKVPFNDTKYSQYNALNVPLHNRRHQLKMRDIAGQALAFV QDLVTALLNFHTYTEQRIQIFPVDSAIDTISPLNQKFSQYLHENASYVRPLEEGMLHLFESITEDTVTVLETTVKLKTFSEHLTSYICFL RKILPYQLKSLEEECESSLCTSALRARNLELSQDMKKMTAVFEKLQTYIALLALPSTEPDGLLRTNYSSVLTNVGAALHGFHDVMKDISK HYSQKAAIEHELPTATQKLITTNDCILSSVVALTNGAGKIASFFSNNLDYFIASLSYGPKAASGFISPLSAECMLQYKKKAAAYMKSLRK VQQSLEKISKLEQEKEHWMLEAQLAKIKLEKENQRIADKLKNTGSAQLVGLAQENAAVSNTAGQDEATAKAVLEPIQSTSLKDSKKRVFS GIQPTGILHLGNYLGAIESWVRLQDEYDSVLYSIVDLHSITVPQDPAVLRQSILDMTAVLLACGINPEKSILFQQSQVSEHTQLSWILSC MVRLPRLQHLHQWKAKTTKQKHDGTVGLLTYPVLQAADILLYKSTHVPVGEDQVQHMELVQDLAQGFNKKYGEFFPVPESILSMCVLVFL -------------------------------------------------------------- >In-frame_ENST00000449090_ENST00000235521_TCGA-BH-A0B2-01A_PPP1R21_chr2_48725874_+_WARS2_chr1_119619230_length(transcript)=4622nt_BP=1939nt TACTGCCTGACCCGTTCCCGGGAGCGTGTCTGGGTTTGGGGGCGGGAGACAGGCTGAGCCGCCTGGGCGGCCTGGCCTGTACGGGGCGGG GGAGGCCATGGCCTCGGCTGAGTTGCAGGGGAAGTACCAGAAGCTGGCTCAGGAGTACTCGAAGCTTCGGGCTCAGAATCAGGTTCTGAA AAAAGGTGTTGTGGATGAACAAGCAAATTCTGCAGCTTTAAAGGAGCAACTGAAAATGAAGGATCAGTCATTGAGAAAACTACAACAGGA AATGGACAGTTTGACATTTCGAAATCTGCAGCTTGCCAAGAGGGTAGAACTACTTCAAGATGAACTAGCTCTAAGTGAACCACGAGGCAA GAAAAACAAGAAAAGTGGAGAATCTTCTTCTCAGTTGAGTCAAGAGCAGAAGAGTGTCTTTGATGAAGATCTGCAAAAGAAGATAGAAGA GAATGAACGGTTGCATATACAATTTTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGCAGAGCTGAGGAGTCGACTGGCCACTCTGGA GACAGAAGCAGCCCAGCACCAAGCTGTGGTTGACGGTCTCACCCGGAAGTACATGGAAACCATTGAGAAGCTGCAGAACGACAAGGCTAA ACTAGAAGTGAAATCTCAGACTCTAGAAAAGGAAGCCAAGGAATGTCGACTTCGAACGGAAGAATGTCAATTACAGTTAAAGACTCTTCA TGAAGATTTGTCAGGTAGATTAGAGGAATCCTTATCAATCATCAATGAAAAAGTACCTTTTAATGATACAAAATATAGTCAGTACAACGC TCTGAACGTTCCACTCCACAATAGGAGACACCAGCTGAAGATGCGAGATATTGCTGGGCAGGCCCTGGCTTTTGTTCAGGATCTTGTGAC GGCTCTTCTAAACTTTCATACCTACACAGAACAGAGGATTCAAATTTTTCCTGTTGATTCTGCCATTGACACTATATCTCCATTGAATCA GAAGTTCTCACAATACCTTCATGAAAATGCGTCCTATGTCCGCCCTCTTGAGGAAGGAATGCTTCATTTATTTGAAAGTATCACTGAGGA TACTGTGACTGTCTTGGAGACAACTGTGAAATTGAAAACTTTTTCAGAACACTTAACCTCCTACATATGTTTTCTTAGGAAGATTCTTCC CTATCAGTTAAAAAGTTTAGAAGAAGAATGTGAATCCTCTCTTTGCACATCTGCGTTAAGAGCCAGGAATCTAGAGCTGTCCCAGGACAT GAAAAAAATGACAGCTGTGTTTGAGAAGCTGCAGACTTACATAGCTCTTCTTGCCTTGCCAAGTACAGAGCCAGATGGACTCCTTCGGAC AAACTACAGTTCTGTGTTAACAAATGTTGGTGCTGCTCTGCATGGATTTCATGACGTTATGAAAGATATTTCCAAACATTATAGTCAAAA AGCTGCAATAGAGCATGAACTTCCAACAGCAACACAGAAGCTGATAACAACTAATGACTGTATCCTGTCATCAGTAGTGGCATTAACAAA TGGAGCAGGAAAGATTGCATCCTTCTTCAGCAACAATTTGGACTACTTCATTGCTTCACTGAGCTATGGACCTAAGGCAGCGAGTGGATT CATTAGTCCTCTTTCAGCTGAATGCATGCTACAGTATAAGAAAAAAGCTGCTGCCTATATGAAGTCTTTGAGAAAGGTTCAACAGAGTTT GGAAAAGATTTCTAAACTGGAGCAGGAAAAAGAACATTGGATGTTGGAAGCACAATTAGCCAAAATCAAGCTAGAGAAAGAAAACCAGCG AATTGCAGATAAGCTGAAGAATACAGGTAGTGCCCAGCTGGTTGGGCTGGCCCAGGAAAATGCTGCTGTGTCAAATACTGCTGGCCAGGA TGAAGCCACAGCTAAGGCTGTGTTGGAGCCCATTCAGAGCACCAGTCTAAAAGACAGCAAGAAGCGAGTATTTTCCGGCATTCAACCTAC AGGAATCCTCCACCTGGGCAATTACCTGGGAGCCATTGAGAGCTGGGTGAGGTTACAGGATGAATATGACTCTGTATTATACAGCATTGT TGACCTCCACTCCATTACTGTCCCCCAAGACCCAGCTGTCCTTCGGCAGAGCATCCTGGACATGACTGCTGTTCTTCTTGCCTGTGGCAT AAACCCGGAAAAAAGCATCCTTTTCCAACAATCTCAGGTGTCTGAACACACACAATTAAGTTGGATCCTTTCCTGCATGGTCAGACTACC TCGATTACAACATTTACATCAGTGGAAGGCAAAGACTACCAAGCAGAAGCACGATGGCACGGTGGGCCTGCTCACATACCCAGTACTCCA GGCAGCCGACATTCTGTTGTACAAGTCCACACACGTTCCTGTTGGGGAGGATCAAGTCCAGCACATGGAACTAGTTCAGGATCTAGCACA AGGTTTCAACAAGAAGTATGGGGAGTTCTTTCCAGTGCCCGAGTCCATTCTCACATCCATGAAGAAGGTAAAATCCCTACGTGATCCTTC TGCCAAAATGTCGAAATCAGACCCTGACAAACTGGCCACCGTCCGAATAACAGACAGCCCAGAGGAGATAGTGCAGAAATTCCGCAAGGC TGTGACAGACTTCACCTCGGAGGTCACCTATGACCCGGCTGGCCGCGCTGGCGTGTCCAACATAGTGGCGGTGCATGCCGCGGTGACGGG GCTCTCCGTGGAGGAAGTGGTGCGCCGCAGCGCGGGCATGAACACTGCTCGCTACAAGCTGGCCGTGGCAGATGCTGTGATTGAGAAGTT TGCCCCAATTAAGCGTGAAATTGAAAAACTGAAGCTGGACAAGGACCATTTAGAGAAGGTTTTACAAATTGGATCAGCAAAAGCCAAAGA ATTAGCATACACTGTGTGCCAGGAGGTGAAGAAATTGGTGGGTTTTCTATAGGAAGTTTCAACGAATCACAGCAAGGCTTTTGTGCCTTG CACTCCATGCATTCTGATAACGGCAGCTTTCCTAAAAAGAAAAAGTTATAGTTTTGGGACATTTAATTTGGTATAGCTGATTATTGGCTT TATTTGATGAATATTGCTTTGTAGCTTTGAAATACGACAGTGTTCCAAATCCCATCAACAAAATGCTGTGAACAACAACAACAAAAAATA AATCAAGAAGGCATAGCTGTCTGAATCCCCAATTATTGAGGCACACTCCTTGGCCTGCAGAAATGTGATTGAAGTAAGGAGTAATTTGGG AAATGGAGTATCATTTGTGCTTCTCTCTGGAGTACTTACTGTAACAGATGCACACGTTATCTACTTCAACCCTTTTATAAAGCAATATAT AGAGGTCTTAGATGTATAATCCTTGAGATGCCATTTGATCAGATGCCAATTTGTATTCAGAGCTCATAAAAACAAGTCCATTCTTATAGT TTGTTTGTCACTGAGACGGTGCCTGATTTAATATATTTAAGCTGCTTAACTTGTTTTCCAAGAGATAACACCAACTGTTCCAGCAATAAT TTGTTTTTTAATTCAGAGATATGGGATATGATCTTCTAAGGAGGTTGCATTATTTTGACCTGATTTATTTATTGTACAAGAGCCCAAGTC CCTGAATTATATTCTTAATAAGTGCTTTCTTGCATTCATTTCAGTTTAGTCTCACCAACCCCCTATGAATTAGGAGAATTATTGTCATTT TACACATGAGGAAAGTGAGGCTGAGAGAATCCAATTAGCTTGTACGATATCACTCCATAAGAGAAGCAAATCTGAGAGTAAAACCCTTAC CCCTTATTCTTAAGAATAGTGCTTGTTTATTCAGTACAAAAAAAATGCTGAAAGGCAGCGTTTTTTAGACTCTAAACATTCTGATTTTGA AGGTGGGTGTTGGAACGACTGATGATGTTTTTTATATCATCAATTCAGCCAATGGATGCGAACTTAAAATCTGGATTCACAGAACCGTGG TCACATTTCCCCATCAAAATCCCCAAGGCGGGTCCCAAGTTCTCTCCTCTACGCTCATTGCAGAAATACTTTGAAATAGGTTCTGCCAGT CTACAATAGCAGTGAAGACTGACAAATCAGATATTCCCAATGACTGACAGCTTCTCATCTTGCCTCTACCTCAGTTAAGTAATGTCACCC TGAAACCTAGCTTTTCTGCACTTCCATTTCTGACACCTGAAAATGAAAATGATAATCCTAACTTATACACCAAGACCTGTTAGCAAGATC GATTTTGTAACAGAAATTGCTTATAAGTTTTTTATCAGTAAGGACCATGATCACCATTTGTACATACATAACTAGGTTGTTGAGCAAAGC ATTTTTGCTCATGTTTCTTAAGGAAGTAGAGTAGTCCTTGTGTCAGAACACATGTTAATCCACAAAACGCCCCATCCCAGATTCCAAATT AAAACATCGTTTTTAGGATTCTTGGAGCTAGCCTGGATCATGGGTAAAGGAAACATTTTGCCTTTTGTATCTTATACTGGAATGGGATGT CTGTAAGTCCTAGAACCTCTTTGAGCATATTTCTTACAAGCCTCTGTTTTTTCCCCTTTAAAGGAAACTTTGAAAGGATTGTGAATACTG >In-frame_ENST00000449090_ENST00000235521_TCGA-BH-A0B2-01A_PPP1R21_chr2_48725874_+_WARS2_chr1_119619230_length(amino acids)=951AA_start in transcript=76_stop in transcript=2931 MYGAGEAMASAELQGKYQKLAQEYSKLRAQNQVLKKGVVDEQANSAALKEQLKMKDQSLRKLQQEMDSLTFRNLQLAKRVELLQDELALS EPRGKKNKKSGESSSQLSQEQKSVFDEDLQKKIEENERLHIQFFEADEQHKHVEAELRSRLATLETEAAQHQAVVDGLTRKYMETIEKLQ NDKAKLEVKSQTLEKEAKECRLRTEECQLQLKTLHEDLSGRLEESLSIINEKVPFNDTKYSQYNALNVPLHNRRHQLKMRDIAGQALAFV QDLVTALLNFHTYTEQRIQIFPVDSAIDTISPLNQKFSQYLHENASYVRPLEEGMLHLFESITEDTVTVLETTVKLKTFSEHLTSYICFL RKILPYQLKSLEEECESSLCTSALRARNLELSQDMKKMTAVFEKLQTYIALLALPSTEPDGLLRTNYSSVLTNVGAALHGFHDVMKDISK HYSQKAAIEHELPTATQKLITTNDCILSSVVALTNGAGKIASFFSNNLDYFIASLSYGPKAASGFISPLSAECMLQYKKKAAAYMKSLRK VQQSLEKISKLEQEKEHWMLEAQLAKIKLEKENQRIADKLKNTGSAQLVGLAQENAAVSNTAGQDEATAKAVLEPIQSTSLKDSKKRVFS GIQPTGILHLGNYLGAIESWVRLQDEYDSVLYSIVDLHSITVPQDPAVLRQSILDMTAVLLACGINPEKSILFQQSQVSEHTQLSWILSC MVRLPRLQHLHQWKAKTTKQKHDGTVGLLTYPVLQAADILLYKSTHVPVGEDQVQHMELVQDLAQGFNKKYGEFFPVPESILTSMKKVKS LRDPSAKMSKSDPDKLATVRITDSPEEIVQKFRKAVTDFTSEVTYDPAGRAGVSNIVAVHAAVTGLSVEEVVRRSAGMNTARYKLAVADA -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for PPP1R21-WARS2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for PPP1R21-WARS2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
Related Diseases for PPP1R21-WARS2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | PPP1R21 | C0019214 | Hepatosplenomegaly | 1 | GENOMICS_ENGLAND |
Hgene | PPP1R21 | C4018871 | Abnormality of the respiratory system | 1 | GENOMICS_ENGLAND |
Tgene | WARS2 | C4540192 | NEURODEVELOPMENTAL DISORDER, MITOCHONDRIAL, WITH ABNORMAL MOVEMENTS AND LACTIC ACIDOSIS, WITH OR WITHOUT SEIZURES | 3 | GENOMICS_ENGLAND;UNIPROT |