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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:PTAR1-PIP5K1B (FusionGDB2 ID:69383) |
Fusion Gene Summary for PTAR1-PIP5K1B |
Fusion gene summary |
Fusion gene information | Fusion gene name: PTAR1-PIP5K1B | Fusion gene ID: 69383 | Hgene | Tgene | Gene symbol | PTAR1 | PIP5K1B | Gene ID | 375743 | 8395 |
Gene name | protein prenyltransferase alpha subunit repeat containing 1 | phosphatidylinositol-4-phosphate 5-kinase type 1 beta | |
Synonyms | - | MSS4|STM7 | |
Cytomap | 9q21.12 | 9q21.11 | |
Type of gene | protein-coding | protein-coding | |
Description | protein prenyltransferase alpha subunit repeat-containing protein 1 | phosphatidylinositol 4-phosphate 5-kinase type-1 betaPIP5K1-betaPIP5KIbetaphosphatidylinositol 4-phosphate 5-kinase type I betaprotein STM-7ptdIns(4)P-5-kinase 1 betatype I phosphatidylinositol 4-phosphate 5-kinase beta | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000377200, ENST00000340434, ENST00000472967, | ENST00000541509, ENST00000265382, ENST00000474356, | |
Fusion gene scores | * DoF score | 4 X 5 X 3=60 | 10 X 16 X 5=800 |
# samples | 5 | 12 | |
** MAII score | log2(5/60*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(12/800*10)=-2.73696559416621 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PTAR1 [Title/Abstract] AND PIP5K1B [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | PTAR1(72347055)-PIP5K1B(71503897), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across PTAR1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across PIP5K1B (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | SARC | TCGA-DX-A48N-01A | PTAR1 | chr9 | 72347055 | - | PIP5K1B | chr9 | 71503897 | + |
ChimerDB4 | SARC | TCGA-DX-A48N | PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + |
ChimerDB4 | SARC | TCGA-DX-A48N-01A | PTAR1 | chr9 | 72347055 | - | PIP5K1B | chr9 | 71503897 | + |
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Fusion Gene ORF analysis for PTAR1-PIP5K1B |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000377200 | ENST00000541509 | PTAR1 | chr9 | 72347055 | - | PIP5K1B | chr9 | 71503897 | + |
In-frame | ENST00000377200 | ENST00000265382 | PTAR1 | chr9 | 72347055 | - | PIP5K1B | chr9 | 71503897 | + |
5CDS-intron | ENST00000377200 | ENST00000474356 | PTAR1 | chr9 | 72347055 | - | PIP5K1B | chr9 | 71503897 | + |
In-frame | ENST00000340434 | ENST00000541509 | PTAR1 | chr9 | 72347055 | - | PIP5K1B | chr9 | 71503897 | + |
In-frame | ENST00000340434 | ENST00000265382 | PTAR1 | chr9 | 72347055 | - | PIP5K1B | chr9 | 71503897 | + |
5CDS-intron | ENST00000340434 | ENST00000474356 | PTAR1 | chr9 | 72347055 | - | PIP5K1B | chr9 | 71503897 | + |
intron-3CDS | ENST00000472967 | ENST00000541509 | PTAR1 | chr9 | 72347055 | - | PIP5K1B | chr9 | 71503897 | + |
intron-3CDS | ENST00000472967 | ENST00000265382 | PTAR1 | chr9 | 72347055 | - | PIP5K1B | chr9 | 71503897 | + |
intron-intron | ENST00000472967 | ENST00000474356 | PTAR1 | chr9 | 72347055 | - | PIP5K1B | chr9 | 71503897 | + |
In-frame | ENST00000377200 | ENST00000541509 | PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + |
In-frame | ENST00000377200 | ENST00000265382 | PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + |
5CDS-intron | ENST00000377200 | ENST00000474356 | PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + |
In-frame | ENST00000340434 | ENST00000541509 | PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + |
In-frame | ENST00000340434 | ENST00000265382 | PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + |
5CDS-intron | ENST00000340434 | ENST00000474356 | PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + |
intron-3CDS | ENST00000472967 | ENST00000541509 | PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + |
intron-3CDS | ENST00000472967 | ENST00000265382 | PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + |
intron-intron | ENST00000472967 | ENST00000474356 | PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000377200 | PTAR1 | chr9 | 72347055 | - | ENST00000541509 | PIP5K1B | chr9 | 71503897 | + | 1920 | 408 | 3 | 1598 | 531 |
ENST00000377200 | PTAR1 | chr9 | 72347055 | - | ENST00000265382 | PIP5K1B | chr9 | 71503897 | + | 2439 | 408 | 3 | 1712 | 569 |
ENST00000340434 | PTAR1 | chr9 | 72347055 | - | ENST00000541509 | PIP5K1B | chr9 | 71503897 | + | 2158 | 646 | 4 | 1836 | 610 |
ENST00000340434 | PTAR1 | chr9 | 72347055 | - | ENST00000265382 | PIP5K1B | chr9 | 71503897 | + | 2677 | 646 | 4 | 1950 | 648 |
ENST00000377200 | PTAR1 | chr9 | 72347054 | - | ENST00000541509 | PIP5K1B | chr9 | 71503896 | + | 1920 | 408 | 3 | 1598 | 531 |
ENST00000377200 | PTAR1 | chr9 | 72347054 | - | ENST00000265382 | PIP5K1B | chr9 | 71503896 | + | 2439 | 408 | 3 | 1712 | 569 |
ENST00000340434 | PTAR1 | chr9 | 72347054 | - | ENST00000541509 | PIP5K1B | chr9 | 71503896 | + | 2158 | 646 | 4 | 1836 | 610 |
ENST00000340434 | PTAR1 | chr9 | 72347054 | - | ENST00000265382 | PIP5K1B | chr9 | 71503896 | + | 2677 | 646 | 4 | 1950 | 648 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000377200 | ENST00000541509 | PTAR1 | chr9 | 72347055 | - | PIP5K1B | chr9 | 71503897 | + | 0.003482482 | 0.99651754 |
ENST00000377200 | ENST00000265382 | PTAR1 | chr9 | 72347055 | - | PIP5K1B | chr9 | 71503897 | + | 0.001169516 | 0.9988305 |
ENST00000340434 | ENST00000541509 | PTAR1 | chr9 | 72347055 | - | PIP5K1B | chr9 | 71503897 | + | 0.001861638 | 0.9981383 |
ENST00000340434 | ENST00000265382 | PTAR1 | chr9 | 72347055 | - | PIP5K1B | chr9 | 71503897 | + | 0.000620756 | 0.99937916 |
ENST00000377200 | ENST00000541509 | PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + | 0.003482482 | 0.99651754 |
ENST00000377200 | ENST00000265382 | PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + | 0.001169516 | 0.9988305 |
ENST00000340434 | ENST00000541509 | PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + | 0.001861638 | 0.9981383 |
ENST00000340434 | ENST00000265382 | PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + | 0.000620756 | 0.99937916 |
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Fusion Genomic Features for PTAR1-PIP5K1B |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + | 0.86941373 | 0.13058628 |
PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + | 0.86941373 | 0.13058628 |
PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + | 0.86941373 | 0.13058628 |
PTAR1 | chr9 | 72347054 | - | PIP5K1B | chr9 | 71503896 | + | 0.86941373 | 0.13058628 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for PTAR1-PIP5K1B |
Go to FGviewer for the breakpoints of chr9:72347055-chr9:71503897 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PTAR1 | chr9:72347054 | chr9:71503896 | ENST00000340434 | - | 5 | 8 | 122_155 | 214.0 | 403.0 | Repeat | Note=PFTA 2 |
Hgene | PTAR1 | chr9:72347054 | chr9:71503896 | ENST00000340434 | - | 5 | 8 | 180_213 | 214.0 | 403.0 | Repeat | Note=PFTA 3 |
Hgene | PTAR1 | chr9:72347054 | chr9:71503896 | ENST00000340434 | - | 5 | 8 | 87_120 | 214.0 | 403.0 | Repeat | Note=PFTA 1 |
Hgene | PTAR1 | chr9:72347055 | chr9:71503897 | ENST00000340434 | - | 5 | 8 | 122_155 | 214.0 | 403.0 | Repeat | Note=PFTA 2 |
Hgene | PTAR1 | chr9:72347055 | chr9:71503897 | ENST00000340434 | - | 5 | 8 | 180_213 | 214.0 | 403.0 | Repeat | Note=PFTA 3 |
Hgene | PTAR1 | chr9:72347055 | chr9:71503897 | ENST00000340434 | - | 5 | 8 | 87_120 | 214.0 | 403.0 | Repeat | Note=PFTA 1 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PTAR1 | chr9:72347054 | chr9:71503896 | ENST00000340434 | - | 5 | 8 | 219_252 | 214.0 | 403.0 | Repeat | Note=PFTA 4 |
Hgene | PTAR1 | chr9:72347054 | chr9:71503896 | ENST00000340434 | - | 5 | 8 | 295_328 | 214.0 | 403.0 | Repeat | Note=PFTA 5 |
Hgene | PTAR1 | chr9:72347055 | chr9:71503897 | ENST00000340434 | - | 5 | 8 | 219_252 | 214.0 | 403.0 | Repeat | Note=PFTA 4 |
Hgene | PTAR1 | chr9:72347055 | chr9:71503897 | ENST00000340434 | - | 5 | 8 | 295_328 | 214.0 | 403.0 | Repeat | Note=PFTA 5 |
Tgene | PIP5K1B | chr9:72347054 | chr9:71503896 | ENST00000265382 | 5 | 16 | 25_395 | 106.0 | 541.0 | Domain | PIPK | |
Tgene | PIP5K1B | chr9:72347055 | chr9:71503897 | ENST00000265382 | 5 | 16 | 25_395 | 106.0 | 541.0 | Domain | PIPK |
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Fusion Gene Sequence for PTAR1-PIP5K1B |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000377200_ENST00000541509_TCGA-DX-A48N-01A_PTAR1_chr9_72347055_-_PIP5K1B_chr9_71503897_length(transcript)=1920nt_BP=408nt AACATGGCCGAGACCAGCGAGGAGGTGGCGGTGCTGGTGCAGCGGGTTGTGAAGGACATCACTAACGCCTTCAGGAGGAACCCACACATG AAAGAGCTGATCCTCTCTGGCACTTTAAATCCAATTAAGGATTTACATCTGGGAAAACTCGCCTTAACCAAGTTTCCAAAGAGTCCAGAA ACATGGATTCACAGGCGATGGGTGCTACAACAGCTAATTCAGGAAACCTCCTTGCCTTCCTTTGTGACCAAAGGAAACTTGGGAACAATT CCCACAGAAAGGGCACAGCGACTCATACAAGAAGAGATGGAGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGCAACTATAATGCTTGG TCCCATCGCATCTGGGTTTTACAGCACTTGGCCAAGCTAGATGTCAAGTATTCCATCTGCAGTGAACCTCTAATAGAACTGTCTAACCCT GGAGCCAGTGGATCCTTGTTTTTTGTGACCAGTGATGATGAATTTATCATCAAAACAGTTCAGCACAAAGAAGCTGAGTTTCTTCAGAAG CTACTGCCAGGCTATTACATGAATTTAAACCAGAATCCAAGGACTCTTTTGCCAAAATTTTACGGACTGTATTGTATGCAATCAGGAGGC ATTAATATCAGGATTGTGGTGATGAACAACGTTTTGCCACGCTCCATGAGAATGCACTTTACATATGACTTGAAAGGCTCAACGTATAAG CGAAGAGCATCCCGTAAAGAGAGAGAGAAATCCAACCCCACATTTAAGGACTTAGATTTCCTGCAAGACATGCACGAAGGGTTGTATTTT GATACGGAAACATACAACGCGCTTATGAAAACACTTCAGAGAGACTGCCGGGTGCTAGAAAGCTTCAAGATCATGGATTATAGCCTTCTG TTGGGAATTCATTTCCTGGACCATTCCCTCAAAGAGAAAGAGGAGGAGACCCCACAAAATGTGCCTGATGCTAAGCGGACTGGGATGCAG AAGGTTCTCTACTCAACAGCCATGGAATCTATCCAGGGTCCAGGGAAATCTGGAGATGGGATAATCACAGAGAACCCAGACACAATGGGA GGCATTCCAGCTAAAAGCCATAGGGGAGAAAAACTACTTTTATTTATGGGCATTATTGACATTCTGCAATCATATAGGTTAATGAAGAAG TTAGAACATTCCTGGAAAGCTCTTGTTTATGATGGGGACACTGTTTCTGTTCATAGACCAAGCTTTTATGCAGACAGATTTCTTAAGTTC ATGAATTCCAGAGTTTTCAAGAAAATTCAAGCTTTGAAGGCTTCACCGTCTAAGAAACGGTGCAATTCAATCGCCGCCCTAAAGGCCACT TCACAGGAGATTGTGTCCTCAATTAGCCAGGAATGGAAGGATGAGAAGCGGGATTTGCTGACTGAAGGACAAAGTTTTAGCAGCCTTGAT GAAGAAGCCCTGGGATCCCGACACAGGCCAGACCTGGTCCCTAGCACTCCATCACTGTTTGAAGCTGCTTCCTTGGCAACCACAATTTCA TCTTCTTCCTTATACGTCAATGAGCACTATCCACACGACAGGCCTACACTCTATTCAAACAGTAAGTGAAAATGGTGATCACCTAAGCAC ATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGA GAAATCATCAACCTGACTTAAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAATACTACCCTATTCTATCA TTTGCTGTTGCTTGCTGAACTGTGAAGAACTGCATGAACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGA >In-frame_ENST00000377200_ENST00000541509_TCGA-DX-A48N-01A_PTAR1_chr9_72347055_-_PIP5K1B_chr9_71503897_length(amino acids)=531AA_start in transcript=3_stop in transcript=1598 MAETSEEVAVLVQRVVKDITNAFRRNPHMKELILSGTLNPIKDLHLGKLALTKFPKSPETWIHRRWVLQQLIQETSLPSFVTKGNLGTIP TERAQRLIQEEMEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDVKYSICSEPLIELSNPGASGSLFFVTSDDEFIIKTVQHKEAEFLQKL LPGYYMNLNQNPRTLLPKFYGLYCMQSGGINIRIVVMNNVLPRSMRMHFTYDLKGSTYKRRASRKEREKSNPTFKDLDFLQDMHEGLYFD TETYNALMKTLQRDCRVLESFKIMDYSLLLGIHFLDHSLKEKEEETPQNVPDAKRTGMQKVLYSTAMESIQGPGKSGDGIITENPDTMGG IPAKSHRGEKLLLFMGIIDILQSYRLMKKLEHSWKALVYDGDTVSVHRPSFYADRFLKFMNSRVFKKIQALKASPSKKRCNSIAALKATS -------------------------------------------------------------- >In-frame_ENST00000377200_ENST00000265382_TCGA-DX-A48N-01A_PTAR1_chr9_72347055_-_PIP5K1B_chr9_71503897_length(transcript)=2439nt_BP=408nt AACATGGCCGAGACCAGCGAGGAGGTGGCGGTGCTGGTGCAGCGGGTTGTGAAGGACATCACTAACGCCTTCAGGAGGAACCCACACATG AAAGAGCTGATCCTCTCTGGCACTTTAAATCCAATTAAGGATTTACATCTGGGAAAACTCGCCTTAACCAAGTTTCCAAAGAGTCCAGAA ACATGGATTCACAGGCGATGGGTGCTACAACAGCTAATTCAGGAAACCTCCTTGCCTTCCTTTGTGACCAAAGGAAACTTGGGAACAATT CCCACAGAAAGGGCACAGCGACTCATACAAGAAGAGATGGAGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGCAACTATAATGCTTGG TCCCATCGCATCTGGGTTTTACAGCACTTGGCCAAGCTAGATGTCAAGTATTCCATCTGCAGTGAACCTCTAATAGAACTGTCTAACCCT GGAGCCAGTGGATCCTTGTTTTTTGTGACCAGTGATGATGAATTTATCATCAAAACAGTTCAGCACAAAGAAGCTGAGTTTCTTCAGAAG CTACTGCCAGGCTATTACATGAATTTAAACCAGAATCCAAGGACTCTTTTGCCAAAATTTTACGGACTGTATTGTATGCAATCAGGAGGC ATTAATATCAGGATTGTGGTGATGAACAACGTTTTGCCACGCTCCATGAGAATGCACTTTACATATGACTTGAAAGGCTCAACGTATAAG CGAAGAGCATCCCGTAAAGAGAGAGAGAAATCCAACCCCACATTTAAGGACTTAGATTTCCTGCAAGACATGCACGAAGGGTTGTATTTT GATACGGAAACATACAACGCGCTTATGAAAACACTTCAGAGAGACTGCCGGGTGCTAGAAAGCTTCAAGATCATGGATTATAGCCTTCTG TTGGGAATTCATTTCCTGGACCATTCCCTCAAAGAGAAAGAGGAGGAGACCCCACAAAATGTGCCTGATGCTAAGCGGACTGGGATGCAG AAGGTTCTCTACTCAACAGCCATGGAATCTATCCAGGGTCCAGGGAAATCTGGAGATGGGATAATCACAGAGAACCCAGACACAATGGGA GGCATTCCAGCTAAAAGCCATAGGGGAGAAAAACTACTTTTATTTATGGGCATTATTGACATTCTGCAATCATATAGGTTAATGAAGAAG TTAGAACATTCCTGGAAAGCTCTTGTTTATGATGGGGACACTGTTTCTGTTCATAGACCAAGCTTTTATGCAGACAGATTTCTTAAGTTC ATGAATTCCAGAGTTTTCAAGAAAATTCAAGCTTTGAAGGCTTCACCGTCTAAGAAACGGTGCAATTCAATCGCCGCCCTAAAGGCCACT TCACAGGAGATTGTGTCCTCAATTAGCCAGGAATGGAAGGATGAGAAGCGGGATTTGCTGACTGAAGGACAAAGTTTTAGCAGCCTTGAT GAAGAAGCCCTGGGATCCCGACACAGGCCAGACCTGGTCCCTAGCACTCCATCACTGTTTGAAGCTGCTTCCTTGGCAACCACAATTTCA TCTTCTTCCTTATACGTCAATGAGCACTATCCACACGACAGGCCTACACTCTATTCAAACAGCAAAGGGTTACCTTCCAGTTCAACATTT ACCTTGGAAGAGGGGACCATCTACTTGACCGCTGAGCCCAACACTCTGGAAGTGCAGGATGACAATGCTTCTGTGCTTGACGTCTATTTA TAAGTGAAAATGGTGATCACCTAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCACAGC AACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCTGACTTAAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGG ATGTGAAAAATACTACCCTATTCTATCATTTGCTGTTGCTTGCTGAACTGTGAAGAACTGCATGAACTATATTTAAGCTGCTTTCTGTAC CATTGCCAATCACCTTTTTGGAGTTGGAAGTGCTATTTTCCTATGGACTTTTGCATTATTTCATTGTGCATGCATCCAGTGATTATACAT AAGCAACATATGTAATCTGCTTATATATTTTTAAAAATCCATCCACACACATGGTAAATTAAGTATAAATTCTTTTGCAAAATTATAGTT CATGTCATTGAAAGTTTAAATTGGTTTCATTTAAAGATCAATATACTAGGTCTGCCTTCACTTTATAGAAAACTAGCTTCTATAAAGATT TTTTCACTGTTTACTAGTGAAATGAGAAAAGCAAAGCTATTTATAAAAGGCCTTATGTCGTGTACATACATTGTCTTTGAAATATTTGTG ATCTAGTTTATTGCTTGTAAAAGAGAAATTATATAATTTATTTAGTAAATACTACTGTAAACTATAGTTTTGTGAGAGAAATAAAATATT >In-frame_ENST00000377200_ENST00000265382_TCGA-DX-A48N-01A_PTAR1_chr9_72347055_-_PIP5K1B_chr9_71503897_length(amino acids)=569AA_start in transcript=3_stop in transcript=1712 MAETSEEVAVLVQRVVKDITNAFRRNPHMKELILSGTLNPIKDLHLGKLALTKFPKSPETWIHRRWVLQQLIQETSLPSFVTKGNLGTIP TERAQRLIQEEMEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDVKYSICSEPLIELSNPGASGSLFFVTSDDEFIIKTVQHKEAEFLQKL LPGYYMNLNQNPRTLLPKFYGLYCMQSGGINIRIVVMNNVLPRSMRMHFTYDLKGSTYKRRASRKEREKSNPTFKDLDFLQDMHEGLYFD TETYNALMKTLQRDCRVLESFKIMDYSLLLGIHFLDHSLKEKEEETPQNVPDAKRTGMQKVLYSTAMESIQGPGKSGDGIITENPDTMGG IPAKSHRGEKLLLFMGIIDILQSYRLMKKLEHSWKALVYDGDTVSVHRPSFYADRFLKFMNSRVFKKIQALKASPSKKRCNSIAALKATS QEIVSSISQEWKDEKRDLLTEGQSFSSLDEEALGSRHRPDLVPSTPSLFEAASLATTISSSSLYVNEHYPHDRPTLYSNSKGLPSSSTFT -------------------------------------------------------------- >In-frame_ENST00000340434_ENST00000541509_TCGA-DX-A48N-01A_PTAR1_chr9_72347055_-_PIP5K1B_chr9_71503897_length(transcript)=2158nt_BP=646nt CAACATGGCCGAGACCAGCGAGGAGGTGGCGGTGCTGGTGCAGCGGGTTGTGAAGGACATCACTAACGCCTTCAGGAGGAACCCACACAT AGATGAAATTGGCCTGATCCCATGTCCTGAAGCTAGGTATAACCGGAGTCCCATAGTCCTGGTTGAAAACAAACTGGGTGTGGAGAGCTG GTGTGTCAAGTTCCTTTTACCATATGTCCACAACAAGCTCCTTTTGTACAGAACAAGAAAGCAATGGCTGAACAGAGATGAATTGATAGA TGTCACATGTACCCTGCTGCTTCTAAACCCAGACTTTACCACTGCATGGAACGTGAGGAAAGAGCTGATCCTCTCTGGCACTTTAAATCC AATTAAGGATTTACATCTGGGAAAACTCGCCTTAACCAAGTTTCCAAAGAGTCCAGAAACATGGATTCACAGGCGATGGGTGCTACAACA GCTAATTCAGGAAACCTCCTTGCCTTCCTTTGTGACCAAAGGAAACTTGGGAACAATTCCCACAGAAAGGGCACAGCGACTCATACAAGA AGAGATGGAGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGCAACTATAATGCTTGGTCCCATCGCATCTGGGTTTTACAGCACTTGGC CAAGCTAGATGTCAAGTATTCCATCTGCAGTGAACCTCTAATAGAACTGTCTAACCCTGGAGCCAGTGGATCCTTGTTTTTTGTGACCAG TGATGATGAATTTATCATCAAAACAGTTCAGCACAAAGAAGCTGAGTTTCTTCAGAAGCTACTGCCAGGCTATTACATGAATTTAAACCA GAATCCAAGGACTCTTTTGCCAAAATTTTACGGACTGTATTGTATGCAATCAGGAGGCATTAATATCAGGATTGTGGTGATGAACAACGT TTTGCCACGCTCCATGAGAATGCACTTTACATATGACTTGAAAGGCTCAACGTATAAGCGAAGAGCATCCCGTAAAGAGAGAGAGAAATC CAACCCCACATTTAAGGACTTAGATTTCCTGCAAGACATGCACGAAGGGTTGTATTTTGATACGGAAACATACAACGCGCTTATGAAAAC ACTTCAGAGAGACTGCCGGGTGCTAGAAAGCTTCAAGATCATGGATTATAGCCTTCTGTTGGGAATTCATTTCCTGGACCATTCCCTCAA AGAGAAAGAGGAGGAGACCCCACAAAATGTGCCTGATGCTAAGCGGACTGGGATGCAGAAGGTTCTCTACTCAACAGCCATGGAATCTAT CCAGGGTCCAGGGAAATCTGGAGATGGGATAATCACAGAGAACCCAGACACAATGGGAGGCATTCCAGCTAAAAGCCATAGGGGAGAAAA ACTACTTTTATTTATGGGCATTATTGACATTCTGCAATCATATAGGTTAATGAAGAAGTTAGAACATTCCTGGAAAGCTCTTGTTTATGA TGGGGACACTGTTTCTGTTCATAGACCAAGCTTTTATGCAGACAGATTTCTTAAGTTCATGAATTCCAGAGTTTTCAAGAAAATTCAAGC TTTGAAGGCTTCACCGTCTAAGAAACGGTGCAATTCAATCGCCGCCCTAAAGGCCACTTCACAGGAGATTGTGTCCTCAATTAGCCAGGA ATGGAAGGATGAGAAGCGGGATTTGCTGACTGAAGGACAAAGTTTTAGCAGCCTTGATGAAGAAGCCCTGGGATCCCGACACAGGCCAGA CCTGGTCCCTAGCACTCCATCACTGTTTGAAGCTGCTTCCTTGGCAACCACAATTTCATCTTCTTCCTTATACGTCAATGAGCACTATCC ACACGACAGGCCTACACTCTATTCAAACAGTAAGTGAAAATGGTGATCACCTAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAG AAGTTTCTCCGCACCAGAATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCTGACTTAAGAGTTTTCAAG ATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAATACTACCCTATTCTATCATTTGCTGTTGCTTGCTGAACTGTGAAGAACTG >In-frame_ENST00000340434_ENST00000541509_TCGA-DX-A48N-01A_PTAR1_chr9_72347055_-_PIP5K1B_chr9_71503897_length(amino acids)=610AA_start in transcript=4_stop in transcript=1836 MAETSEEVAVLVQRVVKDITNAFRRNPHIDEIGLIPCPEARYNRSPIVLVENKLGVESWCVKFLLPYVHNKLLLYRTRKQWLNRDELIDV TCTLLLLNPDFTTAWNVRKELILSGTLNPIKDLHLGKLALTKFPKSPETWIHRRWVLQQLIQETSLPSFVTKGNLGTIPTERAQRLIQEE MEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDVKYSICSEPLIELSNPGASGSLFFVTSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQN PRTLLPKFYGLYCMQSGGINIRIVVMNNVLPRSMRMHFTYDLKGSTYKRRASRKEREKSNPTFKDLDFLQDMHEGLYFDTETYNALMKTL QRDCRVLESFKIMDYSLLLGIHFLDHSLKEKEEETPQNVPDAKRTGMQKVLYSTAMESIQGPGKSGDGIITENPDTMGGIPAKSHRGEKL LLFMGIIDILQSYRLMKKLEHSWKALVYDGDTVSVHRPSFYADRFLKFMNSRVFKKIQALKASPSKKRCNSIAALKATSQEIVSSISQEW -------------------------------------------------------------- >In-frame_ENST00000340434_ENST00000265382_TCGA-DX-A48N-01A_PTAR1_chr9_72347055_-_PIP5K1B_chr9_71503897_length(transcript)=2677nt_BP=646nt CAACATGGCCGAGACCAGCGAGGAGGTGGCGGTGCTGGTGCAGCGGGTTGTGAAGGACATCACTAACGCCTTCAGGAGGAACCCACACAT AGATGAAATTGGCCTGATCCCATGTCCTGAAGCTAGGTATAACCGGAGTCCCATAGTCCTGGTTGAAAACAAACTGGGTGTGGAGAGCTG GTGTGTCAAGTTCCTTTTACCATATGTCCACAACAAGCTCCTTTTGTACAGAACAAGAAAGCAATGGCTGAACAGAGATGAATTGATAGA TGTCACATGTACCCTGCTGCTTCTAAACCCAGACTTTACCACTGCATGGAACGTGAGGAAAGAGCTGATCCTCTCTGGCACTTTAAATCC AATTAAGGATTTACATCTGGGAAAACTCGCCTTAACCAAGTTTCCAAAGAGTCCAGAAACATGGATTCACAGGCGATGGGTGCTACAACA GCTAATTCAGGAAACCTCCTTGCCTTCCTTTGTGACCAAAGGAAACTTGGGAACAATTCCCACAGAAAGGGCACAGCGACTCATACAAGA AGAGATGGAGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGCAACTATAATGCTTGGTCCCATCGCATCTGGGTTTTACAGCACTTGGC CAAGCTAGATGTCAAGTATTCCATCTGCAGTGAACCTCTAATAGAACTGTCTAACCCTGGAGCCAGTGGATCCTTGTTTTTTGTGACCAG TGATGATGAATTTATCATCAAAACAGTTCAGCACAAAGAAGCTGAGTTTCTTCAGAAGCTACTGCCAGGCTATTACATGAATTTAAACCA GAATCCAAGGACTCTTTTGCCAAAATTTTACGGACTGTATTGTATGCAATCAGGAGGCATTAATATCAGGATTGTGGTGATGAACAACGT TTTGCCACGCTCCATGAGAATGCACTTTACATATGACTTGAAAGGCTCAACGTATAAGCGAAGAGCATCCCGTAAAGAGAGAGAGAAATC CAACCCCACATTTAAGGACTTAGATTTCCTGCAAGACATGCACGAAGGGTTGTATTTTGATACGGAAACATACAACGCGCTTATGAAAAC ACTTCAGAGAGACTGCCGGGTGCTAGAAAGCTTCAAGATCATGGATTATAGCCTTCTGTTGGGAATTCATTTCCTGGACCATTCCCTCAA AGAGAAAGAGGAGGAGACCCCACAAAATGTGCCTGATGCTAAGCGGACTGGGATGCAGAAGGTTCTCTACTCAACAGCCATGGAATCTAT CCAGGGTCCAGGGAAATCTGGAGATGGGATAATCACAGAGAACCCAGACACAATGGGAGGCATTCCAGCTAAAAGCCATAGGGGAGAAAA ACTACTTTTATTTATGGGCATTATTGACATTCTGCAATCATATAGGTTAATGAAGAAGTTAGAACATTCCTGGAAAGCTCTTGTTTATGA TGGGGACACTGTTTCTGTTCATAGACCAAGCTTTTATGCAGACAGATTTCTTAAGTTCATGAATTCCAGAGTTTTCAAGAAAATTCAAGC TTTGAAGGCTTCACCGTCTAAGAAACGGTGCAATTCAATCGCCGCCCTAAAGGCCACTTCACAGGAGATTGTGTCCTCAATTAGCCAGGA ATGGAAGGATGAGAAGCGGGATTTGCTGACTGAAGGACAAAGTTTTAGCAGCCTTGATGAAGAAGCCCTGGGATCCCGACACAGGCCAGA CCTGGTCCCTAGCACTCCATCACTGTTTGAAGCTGCTTCCTTGGCAACCACAATTTCATCTTCTTCCTTATACGTCAATGAGCACTATCC ACACGACAGGCCTACACTCTATTCAAACAGCAAAGGGTTACCTTCCAGTTCAACATTTACCTTGGAAGAGGGGACCATCTACTTGACCGC TGAGCCCAACACTCTGGAAGTGCAGGATGACAATGCTTCTGTGCTTGACGTCTATTTATAAGTGAAAATGGTGATCACCTAAGCACATGG ATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAA TCATCAACCTGACTTAAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAATACTACCCTATTCTATCATTTG CTGTTGCTTGCTGAACTGTGAAGAACTGCATGAACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTG CTATTTTCCTATGGACTTTTGCATTATTTCATTGTGCATGCATCCAGTGATTATACATAAGCAACATATGTAATCTGCTTATATATTTTT AAAAATCCATCCACACACATGGTAAATTAAGTATAAATTCTTTTGCAAAATTATAGTTCATGTCATTGAAAGTTTAAATTGGTTTCATTT AAAGATCAATATACTAGGTCTGCCTTCACTTTATAGAAAACTAGCTTCTATAAAGATTTTTTCACTGTTTACTAGTGAAATGAGAAAAGC AAAGCTATTTATAAAAGGCCTTATGTCGTGTACATACATTGTCTTTGAAATATTTGTGATCTAGTTTATTGCTTGTAAAAGAGAAATTAT >In-frame_ENST00000340434_ENST00000265382_TCGA-DX-A48N-01A_PTAR1_chr9_72347055_-_PIP5K1B_chr9_71503897_length(amino acids)=648AA_start in transcript=4_stop in transcript=1950 MAETSEEVAVLVQRVVKDITNAFRRNPHIDEIGLIPCPEARYNRSPIVLVENKLGVESWCVKFLLPYVHNKLLLYRTRKQWLNRDELIDV TCTLLLLNPDFTTAWNVRKELILSGTLNPIKDLHLGKLALTKFPKSPETWIHRRWVLQQLIQETSLPSFVTKGNLGTIPTERAQRLIQEE MEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDVKYSICSEPLIELSNPGASGSLFFVTSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQN PRTLLPKFYGLYCMQSGGINIRIVVMNNVLPRSMRMHFTYDLKGSTYKRRASRKEREKSNPTFKDLDFLQDMHEGLYFDTETYNALMKTL QRDCRVLESFKIMDYSLLLGIHFLDHSLKEKEEETPQNVPDAKRTGMQKVLYSTAMESIQGPGKSGDGIITENPDTMGGIPAKSHRGEKL LLFMGIIDILQSYRLMKKLEHSWKALVYDGDTVSVHRPSFYADRFLKFMNSRVFKKIQALKASPSKKRCNSIAALKATSQEIVSSISQEW KDEKRDLLTEGQSFSSLDEEALGSRHRPDLVPSTPSLFEAASLATTISSSSLYVNEHYPHDRPTLYSNSKGLPSSSTFTLEEGTIYLTAE -------------------------------------------------------------- >In-frame_ENST00000377200_ENST00000541509_TCGA-DX-A48N_PTAR1_chr9_72347054_-_PIP5K1B_chr9_71503896_length(transcript)=1920nt_BP=408nt AACATGGCCGAGACCAGCGAGGAGGTGGCGGTGCTGGTGCAGCGGGTTGTGAAGGACATCACTAACGCCTTCAGGAGGAACCCACACATG AAAGAGCTGATCCTCTCTGGCACTTTAAATCCAATTAAGGATTTACATCTGGGAAAACTCGCCTTAACCAAGTTTCCAAAGAGTCCAGAA ACATGGATTCACAGGCGATGGGTGCTACAACAGCTAATTCAGGAAACCTCCTTGCCTTCCTTTGTGACCAAAGGAAACTTGGGAACAATT CCCACAGAAAGGGCACAGCGACTCATACAAGAAGAGATGGAGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGCAACTATAATGCTTGG TCCCATCGCATCTGGGTTTTACAGCACTTGGCCAAGCTAGATGTCAAGTATTCCATCTGCAGTGAACCTCTAATAGAACTGTCTAACCCT GGAGCCAGTGGATCCTTGTTTTTTGTGACCAGTGATGATGAATTTATCATCAAAACAGTTCAGCACAAAGAAGCTGAGTTTCTTCAGAAG CTACTGCCAGGCTATTACATGAATTTAAACCAGAATCCAAGGACTCTTTTGCCAAAATTTTACGGACTGTATTGTATGCAATCAGGAGGC ATTAATATCAGGATTGTGGTGATGAACAACGTTTTGCCACGCTCCATGAGAATGCACTTTACATATGACTTGAAAGGCTCAACGTATAAG CGAAGAGCATCCCGTAAAGAGAGAGAGAAATCCAACCCCACATTTAAGGACTTAGATTTCCTGCAAGACATGCACGAAGGGTTGTATTTT GATACGGAAACATACAACGCGCTTATGAAAACACTTCAGAGAGACTGCCGGGTGCTAGAAAGCTTCAAGATCATGGATTATAGCCTTCTG TTGGGAATTCATTTCCTGGACCATTCCCTCAAAGAGAAAGAGGAGGAGACCCCACAAAATGTGCCTGATGCTAAGCGGACTGGGATGCAG AAGGTTCTCTACTCAACAGCCATGGAATCTATCCAGGGTCCAGGGAAATCTGGAGATGGGATAATCACAGAGAACCCAGACACAATGGGA GGCATTCCAGCTAAAAGCCATAGGGGAGAAAAACTACTTTTATTTATGGGCATTATTGACATTCTGCAATCATATAGGTTAATGAAGAAG TTAGAACATTCCTGGAAAGCTCTTGTTTATGATGGGGACACTGTTTCTGTTCATAGACCAAGCTTTTATGCAGACAGATTTCTTAAGTTC ATGAATTCCAGAGTTTTCAAGAAAATTCAAGCTTTGAAGGCTTCACCGTCTAAGAAACGGTGCAATTCAATCGCCGCCCTAAAGGCCACT TCACAGGAGATTGTGTCCTCAATTAGCCAGGAATGGAAGGATGAGAAGCGGGATTTGCTGACTGAAGGACAAAGTTTTAGCAGCCTTGAT GAAGAAGCCCTGGGATCCCGACACAGGCCAGACCTGGTCCCTAGCACTCCATCACTGTTTGAAGCTGCTTCCTTGGCAACCACAATTTCA TCTTCTTCCTTATACGTCAATGAGCACTATCCACACGACAGGCCTACACTCTATTCAAACAGTAAGTGAAAATGGTGATCACCTAAGCAC ATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGA GAAATCATCAACCTGACTTAAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAATACTACCCTATTCTATCA TTTGCTGTTGCTTGCTGAACTGTGAAGAACTGCATGAACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGA >In-frame_ENST00000377200_ENST00000541509_TCGA-DX-A48N_PTAR1_chr9_72347054_-_PIP5K1B_chr9_71503896_length(amino acids)=531AA_start in transcript=3_stop in transcript=1598 MAETSEEVAVLVQRVVKDITNAFRRNPHMKELILSGTLNPIKDLHLGKLALTKFPKSPETWIHRRWVLQQLIQETSLPSFVTKGNLGTIP TERAQRLIQEEMEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDVKYSICSEPLIELSNPGASGSLFFVTSDDEFIIKTVQHKEAEFLQKL LPGYYMNLNQNPRTLLPKFYGLYCMQSGGINIRIVVMNNVLPRSMRMHFTYDLKGSTYKRRASRKEREKSNPTFKDLDFLQDMHEGLYFD TETYNALMKTLQRDCRVLESFKIMDYSLLLGIHFLDHSLKEKEEETPQNVPDAKRTGMQKVLYSTAMESIQGPGKSGDGIITENPDTMGG IPAKSHRGEKLLLFMGIIDILQSYRLMKKLEHSWKALVYDGDTVSVHRPSFYADRFLKFMNSRVFKKIQALKASPSKKRCNSIAALKATS -------------------------------------------------------------- >In-frame_ENST00000377200_ENST00000265382_TCGA-DX-A48N_PTAR1_chr9_72347054_-_PIP5K1B_chr9_71503896_length(transcript)=2439nt_BP=408nt AACATGGCCGAGACCAGCGAGGAGGTGGCGGTGCTGGTGCAGCGGGTTGTGAAGGACATCACTAACGCCTTCAGGAGGAACCCACACATG AAAGAGCTGATCCTCTCTGGCACTTTAAATCCAATTAAGGATTTACATCTGGGAAAACTCGCCTTAACCAAGTTTCCAAAGAGTCCAGAA ACATGGATTCACAGGCGATGGGTGCTACAACAGCTAATTCAGGAAACCTCCTTGCCTTCCTTTGTGACCAAAGGAAACTTGGGAACAATT CCCACAGAAAGGGCACAGCGACTCATACAAGAAGAGATGGAGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGCAACTATAATGCTTGG TCCCATCGCATCTGGGTTTTACAGCACTTGGCCAAGCTAGATGTCAAGTATTCCATCTGCAGTGAACCTCTAATAGAACTGTCTAACCCT GGAGCCAGTGGATCCTTGTTTTTTGTGACCAGTGATGATGAATTTATCATCAAAACAGTTCAGCACAAAGAAGCTGAGTTTCTTCAGAAG CTACTGCCAGGCTATTACATGAATTTAAACCAGAATCCAAGGACTCTTTTGCCAAAATTTTACGGACTGTATTGTATGCAATCAGGAGGC ATTAATATCAGGATTGTGGTGATGAACAACGTTTTGCCACGCTCCATGAGAATGCACTTTACATATGACTTGAAAGGCTCAACGTATAAG CGAAGAGCATCCCGTAAAGAGAGAGAGAAATCCAACCCCACATTTAAGGACTTAGATTTCCTGCAAGACATGCACGAAGGGTTGTATTTT GATACGGAAACATACAACGCGCTTATGAAAACACTTCAGAGAGACTGCCGGGTGCTAGAAAGCTTCAAGATCATGGATTATAGCCTTCTG TTGGGAATTCATTTCCTGGACCATTCCCTCAAAGAGAAAGAGGAGGAGACCCCACAAAATGTGCCTGATGCTAAGCGGACTGGGATGCAG AAGGTTCTCTACTCAACAGCCATGGAATCTATCCAGGGTCCAGGGAAATCTGGAGATGGGATAATCACAGAGAACCCAGACACAATGGGA GGCATTCCAGCTAAAAGCCATAGGGGAGAAAAACTACTTTTATTTATGGGCATTATTGACATTCTGCAATCATATAGGTTAATGAAGAAG TTAGAACATTCCTGGAAAGCTCTTGTTTATGATGGGGACACTGTTTCTGTTCATAGACCAAGCTTTTATGCAGACAGATTTCTTAAGTTC ATGAATTCCAGAGTTTTCAAGAAAATTCAAGCTTTGAAGGCTTCACCGTCTAAGAAACGGTGCAATTCAATCGCCGCCCTAAAGGCCACT TCACAGGAGATTGTGTCCTCAATTAGCCAGGAATGGAAGGATGAGAAGCGGGATTTGCTGACTGAAGGACAAAGTTTTAGCAGCCTTGAT GAAGAAGCCCTGGGATCCCGACACAGGCCAGACCTGGTCCCTAGCACTCCATCACTGTTTGAAGCTGCTTCCTTGGCAACCACAATTTCA TCTTCTTCCTTATACGTCAATGAGCACTATCCACACGACAGGCCTACACTCTATTCAAACAGCAAAGGGTTACCTTCCAGTTCAACATTT ACCTTGGAAGAGGGGACCATCTACTTGACCGCTGAGCCCAACACTCTGGAAGTGCAGGATGACAATGCTTCTGTGCTTGACGTCTATTTA TAAGTGAAAATGGTGATCACCTAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCACAGC AACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCTGACTTAAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGG ATGTGAAAAATACTACCCTATTCTATCATTTGCTGTTGCTTGCTGAACTGTGAAGAACTGCATGAACTATATTTAAGCTGCTTTCTGTAC CATTGCCAATCACCTTTTTGGAGTTGGAAGTGCTATTTTCCTATGGACTTTTGCATTATTTCATTGTGCATGCATCCAGTGATTATACAT AAGCAACATATGTAATCTGCTTATATATTTTTAAAAATCCATCCACACACATGGTAAATTAAGTATAAATTCTTTTGCAAAATTATAGTT CATGTCATTGAAAGTTTAAATTGGTTTCATTTAAAGATCAATATACTAGGTCTGCCTTCACTTTATAGAAAACTAGCTTCTATAAAGATT TTTTCACTGTTTACTAGTGAAATGAGAAAAGCAAAGCTATTTATAAAAGGCCTTATGTCGTGTACATACATTGTCTTTGAAATATTTGTG ATCTAGTTTATTGCTTGTAAAAGAGAAATTATATAATTTATTTAGTAAATACTACTGTAAACTATAGTTTTGTGAGAGAAATAAAATATT >In-frame_ENST00000377200_ENST00000265382_TCGA-DX-A48N_PTAR1_chr9_72347054_-_PIP5K1B_chr9_71503896_length(amino acids)=569AA_start in transcript=3_stop in transcript=1712 MAETSEEVAVLVQRVVKDITNAFRRNPHMKELILSGTLNPIKDLHLGKLALTKFPKSPETWIHRRWVLQQLIQETSLPSFVTKGNLGTIP TERAQRLIQEEMEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDVKYSICSEPLIELSNPGASGSLFFVTSDDEFIIKTVQHKEAEFLQKL LPGYYMNLNQNPRTLLPKFYGLYCMQSGGINIRIVVMNNVLPRSMRMHFTYDLKGSTYKRRASRKEREKSNPTFKDLDFLQDMHEGLYFD TETYNALMKTLQRDCRVLESFKIMDYSLLLGIHFLDHSLKEKEEETPQNVPDAKRTGMQKVLYSTAMESIQGPGKSGDGIITENPDTMGG IPAKSHRGEKLLLFMGIIDILQSYRLMKKLEHSWKALVYDGDTVSVHRPSFYADRFLKFMNSRVFKKIQALKASPSKKRCNSIAALKATS QEIVSSISQEWKDEKRDLLTEGQSFSSLDEEALGSRHRPDLVPSTPSLFEAASLATTISSSSLYVNEHYPHDRPTLYSNSKGLPSSSTFT -------------------------------------------------------------- >In-frame_ENST00000340434_ENST00000541509_TCGA-DX-A48N_PTAR1_chr9_72347054_-_PIP5K1B_chr9_71503896_length(transcript)=2158nt_BP=646nt CAACATGGCCGAGACCAGCGAGGAGGTGGCGGTGCTGGTGCAGCGGGTTGTGAAGGACATCACTAACGCCTTCAGGAGGAACCCACACAT AGATGAAATTGGCCTGATCCCATGTCCTGAAGCTAGGTATAACCGGAGTCCCATAGTCCTGGTTGAAAACAAACTGGGTGTGGAGAGCTG GTGTGTCAAGTTCCTTTTACCATATGTCCACAACAAGCTCCTTTTGTACAGAACAAGAAAGCAATGGCTGAACAGAGATGAATTGATAGA TGTCACATGTACCCTGCTGCTTCTAAACCCAGACTTTACCACTGCATGGAACGTGAGGAAAGAGCTGATCCTCTCTGGCACTTTAAATCC AATTAAGGATTTACATCTGGGAAAACTCGCCTTAACCAAGTTTCCAAAGAGTCCAGAAACATGGATTCACAGGCGATGGGTGCTACAACA GCTAATTCAGGAAACCTCCTTGCCTTCCTTTGTGACCAAAGGAAACTTGGGAACAATTCCCACAGAAAGGGCACAGCGACTCATACAAGA AGAGATGGAGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGCAACTATAATGCTTGGTCCCATCGCATCTGGGTTTTACAGCACTTGGC CAAGCTAGATGTCAAGTATTCCATCTGCAGTGAACCTCTAATAGAACTGTCTAACCCTGGAGCCAGTGGATCCTTGTTTTTTGTGACCAG TGATGATGAATTTATCATCAAAACAGTTCAGCACAAAGAAGCTGAGTTTCTTCAGAAGCTACTGCCAGGCTATTACATGAATTTAAACCA GAATCCAAGGACTCTTTTGCCAAAATTTTACGGACTGTATTGTATGCAATCAGGAGGCATTAATATCAGGATTGTGGTGATGAACAACGT TTTGCCACGCTCCATGAGAATGCACTTTACATATGACTTGAAAGGCTCAACGTATAAGCGAAGAGCATCCCGTAAAGAGAGAGAGAAATC CAACCCCACATTTAAGGACTTAGATTTCCTGCAAGACATGCACGAAGGGTTGTATTTTGATACGGAAACATACAACGCGCTTATGAAAAC ACTTCAGAGAGACTGCCGGGTGCTAGAAAGCTTCAAGATCATGGATTATAGCCTTCTGTTGGGAATTCATTTCCTGGACCATTCCCTCAA AGAGAAAGAGGAGGAGACCCCACAAAATGTGCCTGATGCTAAGCGGACTGGGATGCAGAAGGTTCTCTACTCAACAGCCATGGAATCTAT CCAGGGTCCAGGGAAATCTGGAGATGGGATAATCACAGAGAACCCAGACACAATGGGAGGCATTCCAGCTAAAAGCCATAGGGGAGAAAA ACTACTTTTATTTATGGGCATTATTGACATTCTGCAATCATATAGGTTAATGAAGAAGTTAGAACATTCCTGGAAAGCTCTTGTTTATGA TGGGGACACTGTTTCTGTTCATAGACCAAGCTTTTATGCAGACAGATTTCTTAAGTTCATGAATTCCAGAGTTTTCAAGAAAATTCAAGC TTTGAAGGCTTCACCGTCTAAGAAACGGTGCAATTCAATCGCCGCCCTAAAGGCCACTTCACAGGAGATTGTGTCCTCAATTAGCCAGGA ATGGAAGGATGAGAAGCGGGATTTGCTGACTGAAGGACAAAGTTTTAGCAGCCTTGATGAAGAAGCCCTGGGATCCCGACACAGGCCAGA CCTGGTCCCTAGCACTCCATCACTGTTTGAAGCTGCTTCCTTGGCAACCACAATTTCATCTTCTTCCTTATACGTCAATGAGCACTATCC ACACGACAGGCCTACACTCTATTCAAACAGTAAGTGAAAATGGTGATCACCTAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAG AAGTTTCTCCGCACCAGAATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCTGACTTAAGAGTTTTCAAG ATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAATACTACCCTATTCTATCATTTGCTGTTGCTTGCTGAACTGTGAAGAACTG >In-frame_ENST00000340434_ENST00000541509_TCGA-DX-A48N_PTAR1_chr9_72347054_-_PIP5K1B_chr9_71503896_length(amino acids)=610AA_start in transcript=4_stop in transcript=1836 MAETSEEVAVLVQRVVKDITNAFRRNPHIDEIGLIPCPEARYNRSPIVLVENKLGVESWCVKFLLPYVHNKLLLYRTRKQWLNRDELIDV TCTLLLLNPDFTTAWNVRKELILSGTLNPIKDLHLGKLALTKFPKSPETWIHRRWVLQQLIQETSLPSFVTKGNLGTIPTERAQRLIQEE MEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDVKYSICSEPLIELSNPGASGSLFFVTSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQN PRTLLPKFYGLYCMQSGGINIRIVVMNNVLPRSMRMHFTYDLKGSTYKRRASRKEREKSNPTFKDLDFLQDMHEGLYFDTETYNALMKTL QRDCRVLESFKIMDYSLLLGIHFLDHSLKEKEEETPQNVPDAKRTGMQKVLYSTAMESIQGPGKSGDGIITENPDTMGGIPAKSHRGEKL LLFMGIIDILQSYRLMKKLEHSWKALVYDGDTVSVHRPSFYADRFLKFMNSRVFKKIQALKASPSKKRCNSIAALKATSQEIVSSISQEW -------------------------------------------------------------- >In-frame_ENST00000340434_ENST00000265382_TCGA-DX-A48N_PTAR1_chr9_72347054_-_PIP5K1B_chr9_71503896_length(transcript)=2677nt_BP=646nt CAACATGGCCGAGACCAGCGAGGAGGTGGCGGTGCTGGTGCAGCGGGTTGTGAAGGACATCACTAACGCCTTCAGGAGGAACCCACACAT AGATGAAATTGGCCTGATCCCATGTCCTGAAGCTAGGTATAACCGGAGTCCCATAGTCCTGGTTGAAAACAAACTGGGTGTGGAGAGCTG GTGTGTCAAGTTCCTTTTACCATATGTCCACAACAAGCTCCTTTTGTACAGAACAAGAAAGCAATGGCTGAACAGAGATGAATTGATAGA TGTCACATGTACCCTGCTGCTTCTAAACCCAGACTTTACCACTGCATGGAACGTGAGGAAAGAGCTGATCCTCTCTGGCACTTTAAATCC AATTAAGGATTTACATCTGGGAAAACTCGCCTTAACCAAGTTTCCAAAGAGTCCAGAAACATGGATTCACAGGCGATGGGTGCTACAACA GCTAATTCAGGAAACCTCCTTGCCTTCCTTTGTGACCAAAGGAAACTTGGGAACAATTCCCACAGAAAGGGCACAGCGACTCATACAAGA AGAGATGGAGGTCTGTGGTGAAGCAGCAGGGAGATACCCAAGCAACTATAATGCTTGGTCCCATCGCATCTGGGTTTTACAGCACTTGGC CAAGCTAGATGTCAAGTATTCCATCTGCAGTGAACCTCTAATAGAACTGTCTAACCCTGGAGCCAGTGGATCCTTGTTTTTTGTGACCAG TGATGATGAATTTATCATCAAAACAGTTCAGCACAAAGAAGCTGAGTTTCTTCAGAAGCTACTGCCAGGCTATTACATGAATTTAAACCA GAATCCAAGGACTCTTTTGCCAAAATTTTACGGACTGTATTGTATGCAATCAGGAGGCATTAATATCAGGATTGTGGTGATGAACAACGT TTTGCCACGCTCCATGAGAATGCACTTTACATATGACTTGAAAGGCTCAACGTATAAGCGAAGAGCATCCCGTAAAGAGAGAGAGAAATC CAACCCCACATTTAAGGACTTAGATTTCCTGCAAGACATGCACGAAGGGTTGTATTTTGATACGGAAACATACAACGCGCTTATGAAAAC ACTTCAGAGAGACTGCCGGGTGCTAGAAAGCTTCAAGATCATGGATTATAGCCTTCTGTTGGGAATTCATTTCCTGGACCATTCCCTCAA AGAGAAAGAGGAGGAGACCCCACAAAATGTGCCTGATGCTAAGCGGACTGGGATGCAGAAGGTTCTCTACTCAACAGCCATGGAATCTAT CCAGGGTCCAGGGAAATCTGGAGATGGGATAATCACAGAGAACCCAGACACAATGGGAGGCATTCCAGCTAAAAGCCATAGGGGAGAAAA ACTACTTTTATTTATGGGCATTATTGACATTCTGCAATCATATAGGTTAATGAAGAAGTTAGAACATTCCTGGAAAGCTCTTGTTTATGA TGGGGACACTGTTTCTGTTCATAGACCAAGCTTTTATGCAGACAGATTTCTTAAGTTCATGAATTCCAGAGTTTTCAAGAAAATTCAAGC TTTGAAGGCTTCACCGTCTAAGAAACGGTGCAATTCAATCGCCGCCCTAAAGGCCACTTCACAGGAGATTGTGTCCTCAATTAGCCAGGA ATGGAAGGATGAGAAGCGGGATTTGCTGACTGAAGGACAAAGTTTTAGCAGCCTTGATGAAGAAGCCCTGGGATCCCGACACAGGCCAGA CCTGGTCCCTAGCACTCCATCACTGTTTGAAGCTGCTTCCTTGGCAACCACAATTTCATCTTCTTCCTTATACGTCAATGAGCACTATCC ACACGACAGGCCTACACTCTATTCAAACAGCAAAGGGTTACCTTCCAGTTCAACATTTACCTTGGAAGAGGGGACCATCTACTTGACCGC TGAGCCCAACACTCTGGAAGTGCAGGATGACAATGCTTCTGTGCTTGACGTCTATTTATAAGTGAAAATGGTGATCACCTAAGCACATGG ATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAA TCATCAACCTGACTTAAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAATACTACCCTATTCTATCATTTG CTGTTGCTTGCTGAACTGTGAAGAACTGCATGAACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTG CTATTTTCCTATGGACTTTTGCATTATTTCATTGTGCATGCATCCAGTGATTATACATAAGCAACATATGTAATCTGCTTATATATTTTT AAAAATCCATCCACACACATGGTAAATTAAGTATAAATTCTTTTGCAAAATTATAGTTCATGTCATTGAAAGTTTAAATTGGTTTCATTT AAAGATCAATATACTAGGTCTGCCTTCACTTTATAGAAAACTAGCTTCTATAAAGATTTTTTCACTGTTTACTAGTGAAATGAGAAAAGC AAAGCTATTTATAAAAGGCCTTATGTCGTGTACATACATTGTCTTTGAAATATTTGTGATCTAGTTTATTGCTTGTAAAAGAGAAATTAT >In-frame_ENST00000340434_ENST00000265382_TCGA-DX-A48N_PTAR1_chr9_72347054_-_PIP5K1B_chr9_71503896_length(amino acids)=648AA_start in transcript=4_stop in transcript=1950 MAETSEEVAVLVQRVVKDITNAFRRNPHIDEIGLIPCPEARYNRSPIVLVENKLGVESWCVKFLLPYVHNKLLLYRTRKQWLNRDELIDV TCTLLLLNPDFTTAWNVRKELILSGTLNPIKDLHLGKLALTKFPKSPETWIHRRWVLQQLIQETSLPSFVTKGNLGTIPTERAQRLIQEE MEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDVKYSICSEPLIELSNPGASGSLFFVTSDDEFIIKTVQHKEAEFLQKLLPGYYMNLNQN PRTLLPKFYGLYCMQSGGINIRIVVMNNVLPRSMRMHFTYDLKGSTYKRRASRKEREKSNPTFKDLDFLQDMHEGLYFDTETYNALMKTL QRDCRVLESFKIMDYSLLLGIHFLDHSLKEKEEETPQNVPDAKRTGMQKVLYSTAMESIQGPGKSGDGIITENPDTMGGIPAKSHRGEKL LLFMGIIDILQSYRLMKKLEHSWKALVYDGDTVSVHRPSFYADRFLKFMNSRVFKKIQALKASPSKKRCNSIAALKATSQEIVSSISQEW KDEKRDLLTEGQSFSSLDEEALGSRHRPDLVPSTPSLFEAASLATTISSSSLYVNEHYPHDRPTLYSNSKGLPSSSTFTLEEGTIYLTAE -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for PTAR1-PIP5K1B |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for PTAR1-PIP5K1B |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for PTAR1-PIP5K1B |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |