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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:PTCH1-FANCC (FusionGDB2 ID:69428) |
Fusion Gene Summary for PTCH1-FANCC |
Fusion gene summary |
Fusion gene information | Fusion gene name: PTCH1-FANCC | Fusion gene ID: 69428 | Hgene | Tgene | Gene symbol | PTCH1 | FANCC | Gene ID | 5727 | 2176 |
Gene name | patched 1 | FA complementation group C | |
Synonyms | BCNS|NBCCS|PTC|PTC1|PTCH | FA3|FAC|FACC | |
Cytomap | 9q22.32 | 9q22.32 | |
Type of gene | protein-coding | protein-coding | |
Description | protein patched homolog 1 | Fanconi anemia group C proteinFanconi anemia complementation group C | |
Modification date | 20200314 | 20200313 | |
UniProtAcc | . | Q00597 | |
Ensembl transtripts involved in fusion gene | ENST00000331920, ENST00000418258, ENST00000421141, ENST00000437951, ENST00000430669, ENST00000429896, ENST00000375274, ENST00000548379, ENST00000468211, | ENST00000289081, ENST00000375305, ENST00000464653, | |
Fusion gene scores | * DoF score | 6 X 7 X 4=168 | 1 X 1 X 1=1 |
# samples | 7 | 2 | |
** MAII score | log2(7/168*10)=-1.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/1*10)=4.32192809488736 | |
Context | PubMed: PTCH1 [Title/Abstract] AND FANCC [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | PTCH1(98238316)-FANCC(97879672), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | PTCH1-FANCC seems lost the major protein functional domain in Hgene partner, which is a CGC due to the frame-shifted ORF. PTCH1-FANCC seems lost the major protein functional domain in Hgene partner, which is a tumor suppressor due to the frame-shifted ORF. PTCH1-FANCC seems lost the major protein functional domain in Tgene partner, which is a CGC due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | PTCH1 | GO:0010875 | positive regulation of cholesterol efflux | 21931618 |
Hgene | PTCH1 | GO:0072659 | protein localization to plasma membrane | 11278759 |
Fusion gene breakpoints across PTCH1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across FANCC (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | STAD | TCGA-D7-6822-01A | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
ChimerDB4 | STAD | TCGA-D7-6822 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
ChimerDB4 | STAD | TCGA-D7-6822-01A | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
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Fusion Gene ORF analysis for PTCH1-FANCC |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000331920 | ENST00000289081 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
In-frame | ENST00000331920 | ENST00000375305 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
5CDS-5UTR | ENST00000331920 | ENST00000464653 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
Frame-shift | ENST00000418258 | ENST00000289081 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
Frame-shift | ENST00000418258 | ENST00000375305 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
5CDS-5UTR | ENST00000418258 | ENST00000464653 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
Frame-shift | ENST00000421141 | ENST00000289081 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
Frame-shift | ENST00000421141 | ENST00000375305 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
5CDS-5UTR | ENST00000421141 | ENST00000464653 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
In-frame | ENST00000437951 | ENST00000289081 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
In-frame | ENST00000437951 | ENST00000375305 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
5CDS-5UTR | ENST00000437951 | ENST00000464653 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
In-frame | ENST00000430669 | ENST00000289081 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
In-frame | ENST00000430669 | ENST00000375305 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
5CDS-5UTR | ENST00000430669 | ENST00000464653 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
Frame-shift | ENST00000429896 | ENST00000289081 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
Frame-shift | ENST00000429896 | ENST00000375305 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
5CDS-5UTR | ENST00000429896 | ENST00000464653 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
In-frame | ENST00000375274 | ENST00000289081 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
In-frame | ENST00000375274 | ENST00000375305 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
5CDS-5UTR | ENST00000375274 | ENST00000464653 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
intron-3CDS | ENST00000548379 | ENST00000289081 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
intron-3CDS | ENST00000548379 | ENST00000375305 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
intron-5UTR | ENST00000548379 | ENST00000464653 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
intron-3CDS | ENST00000468211 | ENST00000289081 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
intron-3CDS | ENST00000468211 | ENST00000375305 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
intron-5UTR | ENST00000468211 | ENST00000464653 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - |
In-frame | ENST00000331920 | ENST00000289081 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
In-frame | ENST00000331920 | ENST00000375305 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
5CDS-5UTR | ENST00000331920 | ENST00000464653 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
Frame-shift | ENST00000418258 | ENST00000289081 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
Frame-shift | ENST00000418258 | ENST00000375305 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
5CDS-5UTR | ENST00000418258 | ENST00000464653 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
Frame-shift | ENST00000421141 | ENST00000289081 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
Frame-shift | ENST00000421141 | ENST00000375305 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
5CDS-5UTR | ENST00000421141 | ENST00000464653 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
In-frame | ENST00000437951 | ENST00000289081 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
In-frame | ENST00000437951 | ENST00000375305 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
5CDS-5UTR | ENST00000437951 | ENST00000464653 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
In-frame | ENST00000430669 | ENST00000289081 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
In-frame | ENST00000430669 | ENST00000375305 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
5CDS-5UTR | ENST00000430669 | ENST00000464653 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
Frame-shift | ENST00000429896 | ENST00000289081 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
Frame-shift | ENST00000429896 | ENST00000375305 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
5CDS-5UTR | ENST00000429896 | ENST00000464653 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
In-frame | ENST00000375274 | ENST00000289081 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
In-frame | ENST00000375274 | ENST00000375305 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
5CDS-5UTR | ENST00000375274 | ENST00000464653 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
intron-3CDS | ENST00000548379 | ENST00000289081 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
intron-3CDS | ENST00000548379 | ENST00000375305 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
intron-5UTR | ENST00000548379 | ENST00000464653 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
intron-3CDS | ENST00000468211 | ENST00000289081 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
intron-3CDS | ENST00000468211 | ENST00000375305 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
intron-5UTR | ENST00000468211 | ENST00000464653 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000331920 | PTCH1 | chr9 | 98238316 | - | ENST00000289081 | FANCC | chr9 | 97879672 | - | 5362 | 2028 | 174 | 2708 | 844 |
ENST00000331920 | PTCH1 | chr9 | 98238316 | - | ENST00000375305 | FANCC | chr9 | 97879672 | - | 5361 | 2028 | 174 | 2708 | 844 |
ENST00000437951 | PTCH1 | chr9 | 98238316 | - | ENST00000289081 | FANCC | chr9 | 97879672 | - | 5358 | 2024 | 494 | 2704 | 736 |
ENST00000437951 | PTCH1 | chr9 | 98238316 | - | ENST00000375305 | FANCC | chr9 | 97879672 | - | 5357 | 2024 | 494 | 2704 | 736 |
ENST00000430669 | PTCH1 | chr9 | 98238316 | - | ENST00000289081 | FANCC | chr9 | 97879672 | - | 5450 | 2116 | 586 | 2796 | 736 |
ENST00000430669 | PTCH1 | chr9 | 98238316 | - | ENST00000375305 | FANCC | chr9 | 97879672 | - | 5449 | 2116 | 586 | 2796 | 736 |
ENST00000375274 | PTCH1 | chr9 | 98238316 | - | ENST00000289081 | FANCC | chr9 | 97879672 | - | 5204 | 1870 | 145 | 2550 | 801 |
ENST00000375274 | PTCH1 | chr9 | 98238316 | - | ENST00000375305 | FANCC | chr9 | 97879672 | - | 5203 | 1870 | 145 | 2550 | 801 |
ENST00000331920 | PTCH1 | chr9 | 98238315 | - | ENST00000289081 | FANCC | chr9 | 97879672 | - | 5362 | 2028 | 174 | 2708 | 844 |
ENST00000331920 | PTCH1 | chr9 | 98238315 | - | ENST00000375305 | FANCC | chr9 | 97879672 | - | 5361 | 2028 | 174 | 2708 | 844 |
ENST00000437951 | PTCH1 | chr9 | 98238315 | - | ENST00000289081 | FANCC | chr9 | 97879672 | - | 5358 | 2024 | 494 | 2704 | 736 |
ENST00000437951 | PTCH1 | chr9 | 98238315 | - | ENST00000375305 | FANCC | chr9 | 97879672 | - | 5357 | 2024 | 494 | 2704 | 736 |
ENST00000430669 | PTCH1 | chr9 | 98238315 | - | ENST00000289081 | FANCC | chr9 | 97879672 | - | 5450 | 2116 | 586 | 2796 | 736 |
ENST00000430669 | PTCH1 | chr9 | 98238315 | - | ENST00000375305 | FANCC | chr9 | 97879672 | - | 5449 | 2116 | 586 | 2796 | 736 |
ENST00000375274 | PTCH1 | chr9 | 98238315 | - | ENST00000289081 | FANCC | chr9 | 97879672 | - | 5204 | 1870 | 145 | 2550 | 801 |
ENST00000375274 | PTCH1 | chr9 | 98238315 | - | ENST00000375305 | FANCC | chr9 | 97879672 | - | 5203 | 1870 | 145 | 2550 | 801 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000331920 | ENST00000289081 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - | 0.00412397 | 0.995876 |
ENST00000331920 | ENST00000375305 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - | 0.004164358 | 0.99583566 |
ENST00000437951 | ENST00000289081 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - | 0.001526326 | 0.9984737 |
ENST00000437951 | ENST00000375305 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - | 0.001544584 | 0.9984554 |
ENST00000430669 | ENST00000289081 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - | 0.001582454 | 0.9984175 |
ENST00000430669 | ENST00000375305 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - | 0.001598734 | 0.9984012 |
ENST00000375274 | ENST00000289081 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - | 0.000716681 | 0.9992834 |
ENST00000375274 | ENST00000375305 | PTCH1 | chr9 | 98238316 | - | FANCC | chr9 | 97879672 | - | 0.000725208 | 0.9992748 |
ENST00000331920 | ENST00000289081 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - | 0.00412397 | 0.995876 |
ENST00000331920 | ENST00000375305 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - | 0.004164358 | 0.99583566 |
ENST00000437951 | ENST00000289081 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - | 0.001526326 | 0.9984737 |
ENST00000437951 | ENST00000375305 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - | 0.001544584 | 0.9984554 |
ENST00000430669 | ENST00000289081 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - | 0.001582454 | 0.9984175 |
ENST00000430669 | ENST00000375305 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - | 0.001598734 | 0.9984012 |
ENST00000375274 | ENST00000289081 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - | 0.000716681 | 0.9992834 |
ENST00000375274 | ENST00000375305 | PTCH1 | chr9 | 98238315 | - | FANCC | chr9 | 97879672 | - | 0.000725208 | 0.9992748 |
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Fusion Genomic Features for PTCH1-FANCC |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for PTCH1-FANCC |
Go to FGviewer for the breakpoints of chr9:98238316-chr9:97879672 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | FANCC |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability. Upon IFNG induction, may facilitate STAT1 activation by recruiting STAT1 to IFNGR1. {ECO:0000269|PubMed:11520787}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 14_31 | 576.0 | 2534.3333333333335 | Compositional bias | Note=Gly-rich |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 14_31 | 575.0 | 1526.3333333333333 | Compositional bias | Note=Gly-rich |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 14_31 | 425.0 | 2461.3333333333335 | Compositional bias | Note=Gly-rich |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 14_31 | 425.0 | 2513.3333333333335 | Compositional bias | Note=Gly-rich |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 14_31 | 425.0 | 2093.3333333333335 | Compositional bias | Note=Gly-rich |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 14_31 | 510.0 | 1382.0 | Compositional bias | Note=Gly-rich |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 14_31 | 510.0 | 2468.3333333333335 | Compositional bias | Note=Gly-rich |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 14_31 | 576.0 | 2534.3333333333335 | Compositional bias | Note=Gly-rich |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 14_31 | 575.0 | 1526.3333333333333 | Compositional bias | Note=Gly-rich |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 14_31 | 425.0 | 2461.3333333333335 | Compositional bias | Note=Gly-rich |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 14_31 | 425.0 | 2513.3333333333335 | Compositional bias | Note=Gly-rich |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 14_31 | 425.0 | 2093.3333333333335 | Compositional bias | Note=Gly-rich |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 14_31 | 510.0 | 1382.0 | Compositional bias | Note=Gly-rich |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 14_31 | 510.0 | 2468.3333333333335 | Compositional bias | Note=Gly-rich |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 122_436 | 576.0 | 2534.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1_100 | 576.0 | 2534.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 458_472 | 576.0 | 2534.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 494_501 | 576.0 | 2534.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 523_547 | 576.0 | 2534.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 569_577 | 576.0 | 2534.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 122_436 | 575.0 | 1526.3333333333333 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1_100 | 575.0 | 1526.3333333333333 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 458_472 | 575.0 | 1526.3333333333333 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 494_501 | 575.0 | 1526.3333333333333 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 523_547 | 575.0 | 1526.3333333333333 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 569_577 | 575.0 | 1526.3333333333333 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1_100 | 425.0 | 2461.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1_100 | 425.0 | 2513.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1_100 | 425.0 | 2093.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 122_436 | 510.0 | 1382.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1_100 | 510.0 | 1382.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 458_472 | 510.0 | 1382.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 494_501 | 510.0 | 1382.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 122_436 | 510.0 | 2468.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1_100 | 510.0 | 2468.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 458_472 | 510.0 | 2468.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 494_501 | 510.0 | 2468.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 122_436 | 576.0 | 2534.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1_100 | 576.0 | 2534.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 458_472 | 576.0 | 2534.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 494_501 | 576.0 | 2534.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 523_547 | 576.0 | 2534.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 569_577 | 576.0 | 2534.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 122_436 | 575.0 | 1526.3333333333333 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1_100 | 575.0 | 1526.3333333333333 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 458_472 | 575.0 | 1526.3333333333333 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 494_501 | 575.0 | 1526.3333333333333 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 523_547 | 575.0 | 1526.3333333333333 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 569_577 | 575.0 | 1526.3333333333333 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1_100 | 425.0 | 2461.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1_100 | 425.0 | 2513.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1_100 | 425.0 | 2093.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 122_436 | 510.0 | 1382.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1_100 | 510.0 | 1382.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 458_472 | 510.0 | 1382.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 494_501 | 510.0 | 1382.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 122_436 | 510.0 | 2468.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1_100 | 510.0 | 2468.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 458_472 | 510.0 | 2468.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 494_501 | 510.0 | 2468.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 101_121 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 437_457 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 473_493 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 502_522 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 548_568 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 101_121 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 437_457 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 473_493 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 502_522 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 548_568 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 101_121 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 101_121 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 101_121 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 101_121 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 437_457 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 473_493 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 101_121 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 437_457 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 473_493 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 101_121 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 437_457 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 473_493 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 502_522 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 548_568 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 101_121 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 437_457 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 473_493 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 502_522 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 548_568 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 101_121 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 101_121 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 101_121 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 101_121 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 437_457 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 473_493 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 101_121 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 437_457 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 473_493 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 14_31 | 0 | 184.0 | Compositional bias | Note=Gly-rich |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 14_31 | 0 | 184.0 | Compositional bias | Note=Gly-rich |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 438_598 | 576.0 | 2534.3333333333335 | Domain | SSD |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 438_598 | 575.0 | 1526.3333333333333 | Domain | SSD |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 438_598 | 425.0 | 2461.3333333333335 | Domain | SSD |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 438_598 | 425.0 | 2513.3333333333335 | Domain | SSD |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 438_598 | 425.0 | 2093.3333333333335 | Domain | SSD |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 438_598 | 510.0 | 1382.0 | Domain | SSD |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 438_598 | 510.0 | 2468.3333333333335 | Domain | SSD |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 438_598 | 0 | 184.0 | Domain | SSD |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 438_598 | 576.0 | 2534.3333333333335 | Domain | SSD |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 438_598 | 575.0 | 1526.3333333333333 | Domain | SSD |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 438_598 | 425.0 | 2461.3333333333335 | Domain | SSD |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 438_598 | 425.0 | 2513.3333333333335 | Domain | SSD |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 438_598 | 425.0 | 2093.3333333333335 | Domain | SSD |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 438_598 | 510.0 | 1382.0 | Domain | SSD |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 438_598 | 510.0 | 2468.3333333333335 | Domain | SSD |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 438_598 | 0 | 184.0 | Domain | SSD |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1049_1055 | 576.0 | 2534.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1077_1083 | 576.0 | 2534.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1105_1121 | 576.0 | 2534.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1142_1154 | 576.0 | 2534.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1176_1447 | 576.0 | 2534.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 599_748 | 576.0 | 2534.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 770_1027 | 576.0 | 2534.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1049_1055 | 575.0 | 1526.3333333333333 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1077_1083 | 575.0 | 1526.3333333333333 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1105_1121 | 575.0 | 1526.3333333333333 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1142_1154 | 575.0 | 1526.3333333333333 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1176_1447 | 575.0 | 1526.3333333333333 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 599_748 | 575.0 | 1526.3333333333333 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 770_1027 | 575.0 | 1526.3333333333333 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1049_1055 | 425.0 | 2461.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1077_1083 | 425.0 | 2461.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1105_1121 | 425.0 | 2461.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1142_1154 | 425.0 | 2461.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1176_1447 | 425.0 | 2461.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 122_436 | 425.0 | 2461.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 458_472 | 425.0 | 2461.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 494_501 | 425.0 | 2461.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 523_547 | 425.0 | 2461.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 569_577 | 425.0 | 2461.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 599_748 | 425.0 | 2461.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 770_1027 | 425.0 | 2461.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1049_1055 | 425.0 | 2513.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1077_1083 | 425.0 | 2513.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1105_1121 | 425.0 | 2513.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1142_1154 | 425.0 | 2513.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1176_1447 | 425.0 | 2513.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 122_436 | 425.0 | 2513.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 458_472 | 425.0 | 2513.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 494_501 | 425.0 | 2513.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 523_547 | 425.0 | 2513.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 569_577 | 425.0 | 2513.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 599_748 | 425.0 | 2513.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 770_1027 | 425.0 | 2513.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1049_1055 | 425.0 | 2093.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1077_1083 | 425.0 | 2093.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1105_1121 | 425.0 | 2093.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1142_1154 | 425.0 | 2093.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1176_1447 | 425.0 | 2093.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 122_436 | 425.0 | 2093.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 458_472 | 425.0 | 2093.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 494_501 | 425.0 | 2093.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 523_547 | 425.0 | 2093.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 569_577 | 425.0 | 2093.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 599_748 | 425.0 | 2093.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 770_1027 | 425.0 | 2093.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1049_1055 | 510.0 | 1382.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1077_1083 | 510.0 | 1382.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1105_1121 | 510.0 | 1382.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1142_1154 | 510.0 | 1382.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1176_1447 | 510.0 | 1382.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 523_547 | 510.0 | 1382.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 569_577 | 510.0 | 1382.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 599_748 | 510.0 | 1382.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 770_1027 | 510.0 | 1382.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1049_1055 | 510.0 | 2468.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1077_1083 | 510.0 | 2468.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1105_1121 | 510.0 | 2468.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1142_1154 | 510.0 | 2468.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1176_1447 | 510.0 | 2468.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 523_547 | 510.0 | 2468.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 569_577 | 510.0 | 2468.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 599_748 | 510.0 | 2468.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 770_1027 | 510.0 | 2468.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1049_1055 | 0 | 184.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1077_1083 | 0 | 184.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1105_1121 | 0 | 184.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1142_1154 | 0 | 184.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1176_1447 | 0 | 184.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 122_436 | 0 | 184.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1_100 | 0 | 184.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 458_472 | 0 | 184.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 494_501 | 0 | 184.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 523_547 | 0 | 184.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 569_577 | 0 | 184.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 599_748 | 0 | 184.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 770_1027 | 0 | 184.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1049_1055 | 576.0 | 2534.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1077_1083 | 576.0 | 2534.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1105_1121 | 576.0 | 2534.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1142_1154 | 576.0 | 2534.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1176_1447 | 576.0 | 2534.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 599_748 | 576.0 | 2534.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 770_1027 | 576.0 | 2534.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1049_1055 | 575.0 | 1526.3333333333333 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1077_1083 | 575.0 | 1526.3333333333333 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1105_1121 | 575.0 | 1526.3333333333333 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1142_1154 | 575.0 | 1526.3333333333333 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1176_1447 | 575.0 | 1526.3333333333333 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 599_748 | 575.0 | 1526.3333333333333 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 770_1027 | 575.0 | 1526.3333333333333 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1049_1055 | 425.0 | 2461.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1077_1083 | 425.0 | 2461.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1105_1121 | 425.0 | 2461.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1142_1154 | 425.0 | 2461.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1176_1447 | 425.0 | 2461.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 122_436 | 425.0 | 2461.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 458_472 | 425.0 | 2461.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 494_501 | 425.0 | 2461.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 523_547 | 425.0 | 2461.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 569_577 | 425.0 | 2461.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 599_748 | 425.0 | 2461.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 770_1027 | 425.0 | 2461.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1049_1055 | 425.0 | 2513.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1077_1083 | 425.0 | 2513.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1105_1121 | 425.0 | 2513.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1142_1154 | 425.0 | 2513.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1176_1447 | 425.0 | 2513.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 122_436 | 425.0 | 2513.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 458_472 | 425.0 | 2513.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 494_501 | 425.0 | 2513.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 523_547 | 425.0 | 2513.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 569_577 | 425.0 | 2513.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 599_748 | 425.0 | 2513.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 770_1027 | 425.0 | 2513.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1049_1055 | 425.0 | 2093.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1077_1083 | 425.0 | 2093.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1105_1121 | 425.0 | 2093.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1142_1154 | 425.0 | 2093.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1176_1447 | 425.0 | 2093.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 122_436 | 425.0 | 2093.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 458_472 | 425.0 | 2093.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 494_501 | 425.0 | 2093.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 523_547 | 425.0 | 2093.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 569_577 | 425.0 | 2093.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 599_748 | 425.0 | 2093.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 770_1027 | 425.0 | 2093.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1049_1055 | 510.0 | 1382.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1077_1083 | 510.0 | 1382.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1105_1121 | 510.0 | 1382.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1142_1154 | 510.0 | 1382.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1176_1447 | 510.0 | 1382.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 523_547 | 510.0 | 1382.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 569_577 | 510.0 | 1382.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 599_748 | 510.0 | 1382.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 770_1027 | 510.0 | 1382.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1049_1055 | 510.0 | 2468.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1077_1083 | 510.0 | 2468.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1105_1121 | 510.0 | 2468.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1142_1154 | 510.0 | 2468.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1176_1447 | 510.0 | 2468.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 523_547 | 510.0 | 2468.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 569_577 | 510.0 | 2468.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 599_748 | 510.0 | 2468.3333333333335 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 770_1027 | 510.0 | 2468.3333333333335 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1049_1055 | 0 | 184.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1077_1083 | 0 | 184.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1105_1121 | 0 | 184.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1142_1154 | 0 | 184.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1176_1447 | 0 | 184.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 122_436 | 0 | 184.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1_100 | 0 | 184.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 458_472 | 0 | 184.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 494_501 | 0 | 184.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 523_547 | 0 | 184.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 569_577 | 0 | 184.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 599_748 | 0 | 184.0 | Topological domain | Cytoplasmic |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 770_1027 | 0 | 184.0 | Topological domain | Extracellular |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1028_1048 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1056_1076 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1084_1104 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1122_1141 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1155_1175 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 578_598 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 749_769 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1028_1048 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1056_1076 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1084_1104 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1122_1141 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1155_1175 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 578_598 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 749_769 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1028_1048 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1056_1076 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1084_1104 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1122_1141 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1155_1175 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 437_457 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 473_493 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 502_522 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 548_568 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 578_598 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 749_769 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1028_1048 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1056_1076 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1084_1104 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1122_1141 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1155_1175 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 437_457 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 473_493 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 502_522 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 548_568 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 578_598 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 749_769 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1028_1048 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1056_1076 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1084_1104 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1122_1141 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1155_1175 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 437_457 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 473_493 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 502_522 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 548_568 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 578_598 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 749_769 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1028_1048 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1056_1076 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1084_1104 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1122_1141 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1155_1175 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 502_522 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 548_568 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 578_598 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 749_769 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1028_1048 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1056_1076 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1084_1104 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1122_1141 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1155_1175 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 502_522 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 548_568 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 578_598 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 749_769 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 101_121 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1028_1048 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1056_1076 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1084_1104 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1122_1141 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1155_1175 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 437_457 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 473_493 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 502_522 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 548_568 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 578_598 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238315 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 749_769 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1028_1048 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1056_1076 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1084_1104 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1122_1141 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 1155_1175 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 578_598 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000331920 | - | 12 | 24 | 749_769 | 576.0 | 2534.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1028_1048 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1056_1076 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1084_1104 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1122_1141 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 1155_1175 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 578_598 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000375274 | - | 12 | 24 | 749_769 | 575.0 | 1526.3333333333333 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1028_1048 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1056_1076 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1084_1104 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1122_1141 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 1155_1175 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 437_457 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 473_493 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 502_522 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 548_568 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 578_598 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000418258 | - | 12 | 24 | 749_769 | 425.0 | 2461.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1028_1048 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1056_1076 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1084_1104 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1122_1141 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 1155_1175 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 437_457 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 473_493 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 502_522 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 548_568 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 578_598 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000421141 | - | 12 | 24 | 749_769 | 425.0 | 2513.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1028_1048 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1056_1076 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1084_1104 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1122_1141 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 1155_1175 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 437_457 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 473_493 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 502_522 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 548_568 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 578_598 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000429896 | - | 12 | 24 | 749_769 | 425.0 | 2093.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1028_1048 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1056_1076 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1084_1104 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1122_1141 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 1155_1175 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 502_522 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 548_568 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 578_598 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000430669 | - | 12 | 23 | 749_769 | 510.0 | 1382.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1028_1048 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1056_1076 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1084_1104 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1122_1141 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 1155_1175 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 502_522 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 548_568 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 578_598 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000437951 | - | 12 | 24 | 749_769 | 510.0 | 2468.3333333333335 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 101_121 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1028_1048 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1056_1076 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1084_1104 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1122_1141 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 1155_1175 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 437_457 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 473_493 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 502_522 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 548_568 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 578_598 | 0 | 184.0 | Transmembrane | Helical |
Hgene | PTCH1 | chr9:98238316 | chr9:97879672 | ENST00000468211 | - | 1 | 5 | 749_769 | 0 | 184.0 | Transmembrane | Helical |
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Fusion Gene Sequence for PTCH1-FANCC |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000331920_ENST00000289081_TCGA-D7-6822-01A_PTCH1_chr9_98238316_-_FANCC_chr9_97879672_length(transcript)=5362nt_BP=2028nt GAACTGGATGTGGGCAGCGGCGGCCGCAGAGACCTCGGGACCCCCGCGCAATGTGGCAATGGAAGGCGCAGGGTCTGACTCCCCGGCAGC GGCCGCGGCCGCAGCGGCAGCAGCGCCCGCCGTGTGAGCAGCAGCAGCGGCTGGTCTGTCAACCGGAGCCCGAGCCCGAGCAGCCTGCGG CCAGCAGCGTCCTCGCAAGCCGAGCGCCCAGGCGCGCCAGGAGCCCGCAGCAGCGGCAGCAGCGCGCCGGGCCGCCCGGGAAGCCTCCGT CCCCGCGGCGGCGGCGGCGGCGGCGGCAACATGGCCTCGGCTGGTAACGCCGCCGAGCCCCAGGACCGCGGCGGCGGCGGCAGCGGCTGT ATCGGTGCCCCGGGACGGCCGGCTGGAGGCGGGAGGCGCAGACGGACGGGGGGGCTGCGCCGTGCTGCCGCGCCGGACCGGGACTATCTG CACCGGCCCAGCTACTGCGACGCCGCCTTCGCTCTGGAGCAGATTTCCAAGGGGAAGGCTACTGGCCGGAAAGCGCCGCTGTGGCTGAGA GCGAAGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGTTGTGGGCCTCCTCATATTTGGG GCCTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGTAAGTCGTGAATTA AATTATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTG ACCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAA CATTTGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCTTTACCCTTGTTTGATTATTACA CCTTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGAC CCTTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAATAAGGCTGAGGTTGGTCATGGT TACATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTCAACCAAACCTCTTGATATGGCC CTTGTTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGTGGGTGGCACAGTCAAGAACAGC ACTGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAG TATGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATATGTGGAGGTGGTTCATCAGAGT GTCGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATCCTTCTCTGACGTCAGTGTCATC CGCGTGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGG CTGGCTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAATTTCCTTTAACGCTGCAACAACT CAGGTTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGAATAAAAGA ATCCCTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTTC ATGGCCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCA TCTCTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGACACTGGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGA GAAGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATG GTGGCAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTACTACGGCCCCCGTGATGGGAGG CAGCAGAGAGCACAGACTATGGTCCAGGTGAAGGCCGTGCTGGGCCACCTCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCCAGGAC CTGCAGACGGTAGCAGGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCTGCTC TGGGCTCCTGGAGGCCACACGATCGCCTGGGATGTCATCACCCTGATGGCTCACACTGCTGAGATAACTCACGAGATCATTGGCTTTCTT GACCAGACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGAGCTCCTTAAAGAGCTGCGAACT CAAGTCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGGACAGGTGATGACCTGTGGCCAC GCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCTAGTATCTATTTTACAAAATGCA GAGCCAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACTCCTGGTGCCCGCCCGGCCAGAC CGTCAGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTCAAGCTGCACATCTATTATTTAA AAATTCAAAGTCTTAGAACCAAGAATTTGGTCATGAACCATTAAAGAATTTAGAGAGAACTTAGCTCTTTTTAGACTCTTTTTAGGAGTC AGGGATCTGGGATAAAGCCACACTGTCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCTCAGGCTTCCCTTGTGTCTCCCT GGACCTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCTGTATTTGCTAAATGATGC TAACTGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCAGAAACATTAGAAGGCAGGATTAA TTCAGTTAGTTAGTTCTCTTGTTAAATGGAAATGGGAATTGGAAATTCCTGATAAAGAATTGGCCTGGCTGGGTGCAGTGGCTCACACCT GTGATCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATTACTTCAGCCCAGGAGTTCCAGACTGCCTGGCTAACATGGCAATACCCTATCT CTACTAAAAATACAAAAATTATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCTGAGGCATGAGGATCTCTTGAAC CCGGGAGGTGGGAGTTGTAGTGAGCCGAGATCATGACACTGCACTCCAGCCTGGGCAACAGAGCGAGACCATCTCTTAAAAAAAGGCATT GTTAGTGTAATCTCAAGGTTAACATTTATTTCATGTCAGTACAGGGTGCTTTTTCCTTTCAGGGACATTCTGGAATTGTATTGGTTGTAC ATTCTTTTGTGTCTATTCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGTATTAGTCTGAGTCTTGGCTCCG TTTTGAGGTATGAGCAAAGTTTTGCTGGATTAGAAGTTAACCTTTAGGGAAATTCCTTATTTTGGTATGTGGCAATGCTAATAGATCCAC TGAAGATCTGGAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTAAAGTATTTTG GTGGCAGCTGCCATCATGGTCATTGCCTTCATATAACATGCTTCGTGCTCATGGTCATTGCCTTCATATAACATGCTTCGTGCCATCATG ATCCTTGCCTTCATATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTGAAAAAGGAGCTGCATGCTTCACTGGAGTTGAGGGCCTCTCT CCTGTTCTGACTTTAAGCCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAACCCCTAGAGA GAGGGGCCACTGGGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTCCTGTGTACAGGGTTGGCC TCTTCCTCCTCCCCTGCCAGGCCTCTGCCCATGCCCCTTCCTTCCTTCTCCTGGGACTGGTGAAGCTAGGCATCTGGAAGACTTCTTCCT AGCCTGGAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGGCGGCC TTGCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGCACTGAAGTGCCTGCTGGCTTCA TGTGGCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGGGGAGCCACCCCTCGGCCATTCCCTCCACCTCCAAGA CAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAG GAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACAGGGGCAGCCGCAG GGAGGCAGGGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTGGACCAAGGTCTTCAGAGGTGCGACAGGGTCTGGAATCTGACCTTAC TCTAGCAGGAGTTTTTGTAGACTCTCCCTGATAGTTTAGTTTTTGATAAAGCATGCTGGTAAAACCACTACCCTCAGAGAGAGCCAAAAA TACAGAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGAATTTTTTAGCTCTTTAAAATCT >In-frame_ENST00000331920_ENST00000289081_TCGA-D7-6822-01A_PTCH1_chr9_98238316_-_FANCC_chr9_97879672_length(amino acids)=844AA_start in transcript=174_stop in transcript=2708 MRPAASSQAERPGAPGARSSGSSAPGRPGSLRPRGGGGGGGNMASAGNAAEPQDRGGGGSGCIGAPGRPAGGGRRRRTGGLRRAAAPDRD YLHRPSYCDAAFALEQISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSR ELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLI ITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLD MALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVH QSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAA TTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQLRFALKTYFPYT SPSLAMVLLQDPQDIPRGHWLQTLKHISELLREAVEDQTHGSCGGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRD GRQQRAQTMVQVKAVLGHLLAMSRSSSLSAQDLQTVAGQGTDTDLRAPAQQLIRHLLLNFLLWAPGGHTIAWDVITLMAHTAEITHEIIG -------------------------------------------------------------- >In-frame_ENST00000331920_ENST00000375305_TCGA-D7-6822-01A_PTCH1_chr9_98238316_-_FANCC_chr9_97879672_length(transcript)=5361nt_BP=2028nt GAACTGGATGTGGGCAGCGGCGGCCGCAGAGACCTCGGGACCCCCGCGCAATGTGGCAATGGAAGGCGCAGGGTCTGACTCCCCGGCAGC GGCCGCGGCCGCAGCGGCAGCAGCGCCCGCCGTGTGAGCAGCAGCAGCGGCTGGTCTGTCAACCGGAGCCCGAGCCCGAGCAGCCTGCGG CCAGCAGCGTCCTCGCAAGCCGAGCGCCCAGGCGCGCCAGGAGCCCGCAGCAGCGGCAGCAGCGCGCCGGGCCGCCCGGGAAGCCTCCGT CCCCGCGGCGGCGGCGGCGGCGGCGGCAACATGGCCTCGGCTGGTAACGCCGCCGAGCCCCAGGACCGCGGCGGCGGCGGCAGCGGCTGT ATCGGTGCCCCGGGACGGCCGGCTGGAGGCGGGAGGCGCAGACGGACGGGGGGGCTGCGCCGTGCTGCCGCGCCGGACCGGGACTATCTG CACCGGCCCAGCTACTGCGACGCCGCCTTCGCTCTGGAGCAGATTTCCAAGGGGAAGGCTACTGGCCGGAAAGCGCCGCTGTGGCTGAGA GCGAAGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGTTGTGGGCCTCCTCATATTTGGG GCCTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGTAAGTCGTGAATTA AATTATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTG ACCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAA CATTTGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCTTTACCCTTGTTTGATTATTACA CCTTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGAC CCTTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAATAAGGCTGAGGTTGGTCATGGT TACATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTCAACCAAACCTCTTGATATGGCC CTTGTTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGTGGGTGGCACAGTCAAGAACAGC ACTGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAG TATGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATATGTGGAGGTGGTTCATCAGAGT GTCGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATCCTTCTCTGACGTCAGTGTCATC CGCGTGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGG CTGGCTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAATTTCCTTTAACGCTGCAACAACT CAGGTTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGAATAAAAGA ATCCCTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTTC ATGGCCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCA TCTCTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGACACTGGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGA GAAGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATG GTGGCAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTACTACGGCCCCCGTGATGGGAGG CAGCAGAGAGCACAGACTATGGTCCAGGTGAAGGCCGTGCTGGGCCACCTCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCCAGGAC CTGCAGACGGTAGCAGGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCTGCTC TGGGCTCCTGGAGGCCACACGATCGCCTGGGATGTCATCACCCTGATGGCTCACACTGCTGAGATAACTCACGAGATCATTGGCTTTCTT GACCAGACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGAGCTCCTTAAAGAGCTGCGAACT CAAGTCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGGACAGGTGATGACCTGTGGCCAC GCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCTAGTATCTATTTTACAAAATGCA GAGCCAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACTCCTGGTGCCCGCCCGGCCAGAC CGTCAGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTCAAGCTGCACATCTATTATTTAA AAATTCAAAGTCTTAGAACCAAGAATTTGGTCATGAACCATTAAAGAATTTAGAGAGAACTTAGCTCTTTTTAGACTCTTTTTAGGAGTC AGGGATCTGGGATAAAGCCACACTGTCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCTCAGGCTTCCCTTGTGTCTCCCT GGACCTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCTGTATTTGCTAAATGATGC TAACTGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCAGAAACATTAGAAGGCAGGATTAA TTCAGTTAGTTAGTTCTCTTGTTAAATGGAAATGGGAATTGGAAATTCCTGATAAAGAATTGGCCTGGCTGGGTGCAGTGGCTCACACCT GTGATCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATTACTTCAGCCCAGGAGTTCCAGACTGCCTGGCTAACATGGCAATACCCTATCT CTACTAAAAATACAAAAATTATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCTGAGGCATGAGGATCTCTTGAAC CCGGGAGGTGGGAGTTGTAGTGAGCCGAGATCATGACACTGCACTCCAGCCTGGGCAACAGAGCGAGACCATCTCTTAAAAAAAGGCATT GTTAGTGTAATCTCAAGGTTAACATTTATTTCATGTCAGTACAGGGTGCTTTTTCCTTTCAGGGACATTCTGGAATTGTATTGGTTGTAC ATTCTTTTGTGTCTATTCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGTATTAGTCTGAGTCTTGGCTCCG TTTTGAGGTATGAGCAAAGTTTTGCTGGATTAGAAGTTAACCTTTAGGGAAATTCCTTATTTTGGTATGTGGCAATGCTAATAGATCCAC TGAAGATCTGGAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTAAAGTATTTTG GTGGCAGCTGCCATCATGGTCATTGCCTTCATATAACATGCTTCGTGCTCATGGTCATTGCCTTCATATAACATGCTTCGTGCCATCATG ATCCTTGCCTTCATATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTGAAAAAGGAGCTGCATGCTTCACTGGAGTTGAGGGCCTCTCT CCTGTTCTGACTTTAAGCCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAACCCCTAGAGA GAGGGGCCACTGGGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTCCTGTGTACAGGGTTGGCC TCTTCCTCCTCCCCTGCCAGGCCTCTGCCCATGCCCCTTCCTTCCTTCTCCTGGGACTGGTGAAGCTAGGCATCTGGAAGACTTCTTCCT AGCCTGGAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGGCGGCC TTGCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGCACTGAAGTGCCTGCTGGCTTCA TGTGGCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGGGGAGCCACCCCTCGGCCATTCCCTCCACCTCCAAGA CAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAG GAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACAGGGGCAGCCGCAG GGAGGCAGGGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTGGACCAAGGTCTTCAGAGGTGCGACAGGGTCTGGAATCTGACCTTAC TCTAGCAGGAGTTTTTGTAGACTCTCCCTGATAGTTTAGTTTTTGATAAAGCATGCTGGTAAAACCACTACCCTCAGAGAGAGCCAAAAA TACAGAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGAATTTTTTAGCTCTTTAAAATCT >In-frame_ENST00000331920_ENST00000375305_TCGA-D7-6822-01A_PTCH1_chr9_98238316_-_FANCC_chr9_97879672_length(amino acids)=844AA_start in transcript=174_stop in transcript=2708 MRPAASSQAERPGAPGARSSGSSAPGRPGSLRPRGGGGGGGNMASAGNAAEPQDRGGGGSGCIGAPGRPAGGGRRRRTGGLRRAAAPDRD YLHRPSYCDAAFALEQISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSR ELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLI ITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLD MALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVH QSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAA TTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQLRFALKTYFPYT SPSLAMVLLQDPQDIPRGHWLQTLKHISELLREAVEDQTHGSCGGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRD GRQQRAQTMVQVKAVLGHLLAMSRSSSLSAQDLQTVAGQGTDTDLRAPAQQLIRHLLLNFLLWAPGGHTIAWDVITLMAHTAEITHEIIG -------------------------------------------------------------- >In-frame_ENST00000437951_ENST00000289081_TCGA-D7-6822-01A_PTCH1_chr9_98238316_-_FANCC_chr9_97879672_length(transcript)=5358nt_BP=2024nt ACCCAGGAGGGCTGTGCTGATAGCACGTTCCTCGAGTTTACTTTGCTTTCCTTGAGTTTATTGTAAAGGGGTAAAGTTTTCGGATCCGTC ACGTGACCCTGACAGGTCCTGCCTATGGCGCGGCAGACCACCCACGCCGAGGGCCATGGAACTGCTTAATAGAAACAGGCTTGTAATTGT GAGTCCGCGCTGCACTCCGCCGAAAGCCTCCGGCGGCCCAGCGCGCCGGGGTTTTTACACTTTCCGTTCCTTTTGTAAAGACGGAGGAGG AGGAGAAGAAGAAGAAGAAAACGGAGGAGAAGAAAAAGACGACAGGGGAGACAAAGAGACCCGCAGCGACAAGGCAAGGGGGAGACGAGG GAAGACTGGGAGAAGACGGAGGAGCGGAGGACGAGGAAAGGGGGGCCAGGGAAAAAAAAGGAATTGATGTGAAATCCAAGCCCAGCGTCC GCGCCATCGGCACCCGCGCTCCGAGCAGGGGTTGACGGCCGGCTATGGGGAAGGCTACTGGCCGGAAAGCGCCGCTGTGGCTGAGAGCGA AGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGTTGTGGGCCTCCTCATATTTGGGGCCT TCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGTAAGTCGTGAATTAAATT ATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTGACCA CAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAACATT TGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCTTTACCCTTGTTTGATTATTACACCTT TGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCCTT TGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAATAAGGCTGAGGTTGGTCATGGTTACA TGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTCAACCAAACCTCTTGATATGGCCCTTG TTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGTGGGTGGCACAGTCAAGAACAGCACTG GAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTATG TCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATATGTGGAGGTGGTTCATCAGAGTGTCG CACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATCCTTCTCTGACGTCAGTGTCATCCGCG TGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCTGG CTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAATTTCCTTTAACGCTGCAACAACTCAGG TTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGAATAAAAGAATCC CTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTTCATGG CCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCATCTC TTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGACACTGGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGAGAAG CAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGTGG CAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTACTACGGCCCCCGTGATGGGAGGCAGC AGAGAGCACAGACTATGGTCCAGGTGAAGGCCGTGCTGGGCCACCTCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCCAGGACCTGC AGACGGTAGCAGGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCTGCTCTGGG CTCCTGGAGGCCACACGATCGCCTGGGATGTCATCACCCTGATGGCTCACACTGCTGAGATAACTCACGAGATCATTGGCTTTCTTGACC AGACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGAGCTCCTTAAAGAGCTGCGAACTCAAG TCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGGACAGGTGATGACCTGTGGCCACGCAT TTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCTAGTATCTATTTTACAAAATGCAGAGC CAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACTCCTGGTGCCCGCCCGGCCAGACCGTC AGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTCAAGCTGCACATCTATTATTTAAAAAT TCAAAGTCTTAGAACCAAGAATTTGGTCATGAACCATTAAAGAATTTAGAGAGAACTTAGCTCTTTTTAGACTCTTTTTAGGAGTCAGGG ATCTGGGATAAAGCCACACTGTCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCTCAGGCTTCCCTTGTGTCTCCCTGGAC CTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCTGTATTTGCTAAATGATGCTAAC TGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCAGAAACATTAGAAGGCAGGATTAATTCA GTTAGTTAGTTCTCTTGTTAAATGGAAATGGGAATTGGAAATTCCTGATAAAGAATTGGCCTGGCTGGGTGCAGTGGCTCACACCTGTGA TCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATTACTTCAGCCCAGGAGTTCCAGACTGCCTGGCTAACATGGCAATACCCTATCTCTAC TAAAAATACAAAAATTATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCTGAGGCATGAGGATCTCTTGAACCCGG GAGGTGGGAGTTGTAGTGAGCCGAGATCATGACACTGCACTCCAGCCTGGGCAACAGAGCGAGACCATCTCTTAAAAAAAGGCATTGTTA GTGTAATCTCAAGGTTAACATTTATTTCATGTCAGTACAGGGTGCTTTTTCCTTTCAGGGACATTCTGGAATTGTATTGGTTGTACATTC TTTTGTGTCTATTCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGTATTAGTCTGAGTCTTGGCTCCGTTTT GAGGTATGAGCAAAGTTTTGCTGGATTAGAAGTTAACCTTTAGGGAAATTCCTTATTTTGGTATGTGGCAATGCTAATAGATCCACTGAA GATCTGGAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTAAAGTATTTTGGTGG CAGCTGCCATCATGGTCATTGCCTTCATATAACATGCTTCGTGCTCATGGTCATTGCCTTCATATAACATGCTTCGTGCCATCATGATCC TTGCCTTCATATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTGAAAAAGGAGCTGCATGCTTCACTGGAGTTGAGGGCCTCTCTCCTG TTCTGACTTTAAGCCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAACCCCTAGAGAGAGG GGCCACTGGGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTCCTGTGTACAGGGTTGGCCTCTT CCTCCTCCCCTGCCAGGCCTCTGCCCATGCCCCTTCCTTCCTTCTCCTGGGACTGGTGAAGCTAGGCATCTGGAAGACTTCTTCCTAGCC TGGAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGGCGGCCTTGC CGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGCACTGAAGTGCCTGCTGGCTTCATGTG GCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGGGGAGCCACCCCTCGGCCATTCCCTCCACCTCCAAGACAGG TGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGAAT GGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACAGGGGCAGCCGCAGGGAG GCAGGGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTGGACCAAGGTCTTCAGAGGTGCGACAGGGTCTGGAATCTGACCTTACTCTA GCAGGAGTTTTTGTAGACTCTCCCTGATAGTTTAGTTTTTGATAAAGCATGCTGGTAAAACCACTACCCTCAGAGAGAGCCAAAAATACA GAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGAATTTTTTAGCTCTTTAAAATCTGTAA >In-frame_ENST00000437951_ENST00000289081_TCGA-D7-6822-01A_PTCH1_chr9_98238316_-_FANCC_chr9_97879672_length(amino acids)=736AA_start in transcript=494_stop in transcript=2704 MGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQ LMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTA YLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMH WQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTT LDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVF LLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQLRFALKTYFPYTSPSLAMVLLQDPQDIPRG HWLQTLKHISELLREAVEDQTHGSCGGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRDGRQQRAQTMVQVKAVLGH LLAMSRSSSLSAQDLQTVAGQGTDTDLRAPAQQLIRHLLLNFLLWAPGGHTIAWDVITLMAHTAEITHEIIGFLDQTLYRWNRLGIESPR -------------------------------------------------------------- >In-frame_ENST00000437951_ENST00000375305_TCGA-D7-6822-01A_PTCH1_chr9_98238316_-_FANCC_chr9_97879672_length(transcript)=5357nt_BP=2024nt ACCCAGGAGGGCTGTGCTGATAGCACGTTCCTCGAGTTTACTTTGCTTTCCTTGAGTTTATTGTAAAGGGGTAAAGTTTTCGGATCCGTC ACGTGACCCTGACAGGTCCTGCCTATGGCGCGGCAGACCACCCACGCCGAGGGCCATGGAACTGCTTAATAGAAACAGGCTTGTAATTGT GAGTCCGCGCTGCACTCCGCCGAAAGCCTCCGGCGGCCCAGCGCGCCGGGGTTTTTACACTTTCCGTTCCTTTTGTAAAGACGGAGGAGG AGGAGAAGAAGAAGAAGAAAACGGAGGAGAAGAAAAAGACGACAGGGGAGACAAAGAGACCCGCAGCGACAAGGCAAGGGGGAGACGAGG GAAGACTGGGAGAAGACGGAGGAGCGGAGGACGAGGAAAGGGGGGCCAGGGAAAAAAAAGGAATTGATGTGAAATCCAAGCCCAGCGTCC GCGCCATCGGCACCCGCGCTCCGAGCAGGGGTTGACGGCCGGCTATGGGGAAGGCTACTGGCCGGAAAGCGCCGCTGTGGCTGAGAGCGA AGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGTTGTGGGCCTCCTCATATTTGGGGCCT TCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGTAAGTCGTGAATTAAATT ATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTGACCA CAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAACATT TGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCTTTACCCTTGTTTGATTATTACACCTT TGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCCTT TGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAATAAGGCTGAGGTTGGTCATGGTTACA TGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTCAACCAAACCTCTTGATATGGCCCTTG TTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGTGGGTGGCACAGTCAAGAACAGCACTG GAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTATG TCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATATGTGGAGGTGGTTCATCAGAGTGTCG CACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATCCTTCTCTGACGTCAGTGTCATCCGCG TGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCTGG CTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAATTTCCTTTAACGCTGCAACAACTCAGG TTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGAATAAAAGAATCC CTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTTCATGG CCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCATCTC TTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGACACTGGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGAGAAG CAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGTGG CAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTACTACGGCCCCCGTGATGGGAGGCAGC AGAGAGCACAGACTATGGTCCAGGTGAAGGCCGTGCTGGGCCACCTCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCCAGGACCTGC AGACGGTAGCAGGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCTGCTCTGGG CTCCTGGAGGCCACACGATCGCCTGGGATGTCATCACCCTGATGGCTCACACTGCTGAGATAACTCACGAGATCATTGGCTTTCTTGACC AGACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGAGCTCCTTAAAGAGCTGCGAACTCAAG TCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGGACAGGTGATGACCTGTGGCCACGCAT TTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCTAGTATCTATTTTACAAAATGCAGAGC CAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACTCCTGGTGCCCGCCCGGCCAGACCGTC AGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTCAAGCTGCACATCTATTATTTAAAAAT TCAAAGTCTTAGAACCAAGAATTTGGTCATGAACCATTAAAGAATTTAGAGAGAACTTAGCTCTTTTTAGACTCTTTTTAGGAGTCAGGG ATCTGGGATAAAGCCACACTGTCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCTCAGGCTTCCCTTGTGTCTCCCTGGAC CTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCTGTATTTGCTAAATGATGCTAAC TGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCAGAAACATTAGAAGGCAGGATTAATTCA GTTAGTTAGTTCTCTTGTTAAATGGAAATGGGAATTGGAAATTCCTGATAAAGAATTGGCCTGGCTGGGTGCAGTGGCTCACACCTGTGA TCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATTACTTCAGCCCAGGAGTTCCAGACTGCCTGGCTAACATGGCAATACCCTATCTCTAC TAAAAATACAAAAATTATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCTGAGGCATGAGGATCTCTTGAACCCGG GAGGTGGGAGTTGTAGTGAGCCGAGATCATGACACTGCACTCCAGCCTGGGCAACAGAGCGAGACCATCTCTTAAAAAAAGGCATTGTTA GTGTAATCTCAAGGTTAACATTTATTTCATGTCAGTACAGGGTGCTTTTTCCTTTCAGGGACATTCTGGAATTGTATTGGTTGTACATTC TTTTGTGTCTATTCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGTATTAGTCTGAGTCTTGGCTCCGTTTT GAGGTATGAGCAAAGTTTTGCTGGATTAGAAGTTAACCTTTAGGGAAATTCCTTATTTTGGTATGTGGCAATGCTAATAGATCCACTGAA GATCTGGAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTAAAGTATTTTGGTGG CAGCTGCCATCATGGTCATTGCCTTCATATAACATGCTTCGTGCTCATGGTCATTGCCTTCATATAACATGCTTCGTGCCATCATGATCC TTGCCTTCATATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTGAAAAAGGAGCTGCATGCTTCACTGGAGTTGAGGGCCTCTCTCCTG TTCTGACTTTAAGCCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAACCCCTAGAGAGAGG GGCCACTGGGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTCCTGTGTACAGGGTTGGCCTCTT CCTCCTCCCCTGCCAGGCCTCTGCCCATGCCCCTTCCTTCCTTCTCCTGGGACTGGTGAAGCTAGGCATCTGGAAGACTTCTTCCTAGCC TGGAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGGCGGCCTTGC CGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGCACTGAAGTGCCTGCTGGCTTCATGTG GCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGGGGAGCCACCCCTCGGCCATTCCCTCCACCTCCAAGACAGG TGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGAAT GGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACAGGGGCAGCCGCAGGGAG GCAGGGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTGGACCAAGGTCTTCAGAGGTGCGACAGGGTCTGGAATCTGACCTTACTCTA GCAGGAGTTTTTGTAGACTCTCCCTGATAGTTTAGTTTTTGATAAAGCATGCTGGTAAAACCACTACCCTCAGAGAGAGCCAAAAATACA GAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGAATTTTTTAGCTCTTTAAAATCTGTAA >In-frame_ENST00000437951_ENST00000375305_TCGA-D7-6822-01A_PTCH1_chr9_98238316_-_FANCC_chr9_97879672_length(amino acids)=736AA_start in transcript=494_stop in transcript=2704 MGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQ LMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTA YLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMH WQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTT LDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVF LLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQLRFALKTYFPYTSPSLAMVLLQDPQDIPRG HWLQTLKHISELLREAVEDQTHGSCGGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRDGRQQRAQTMVQVKAVLGH LLAMSRSSSLSAQDLQTVAGQGTDTDLRAPAQQLIRHLLLNFLLWAPGGHTIAWDVITLMAHTAEITHEIIGFLDQTLYRWNRLGIESPR -------------------------------------------------------------- >In-frame_ENST00000430669_ENST00000289081_TCGA-D7-6822-01A_PTCH1_chr9_98238316_-_FANCC_chr9_97879672_length(transcript)=5450nt_BP=2116nt CGGCCGCGGGGGGCGGGGAGAGGGTGGCTAGGCTCGCGGGAGCTCGCCGGGCAGGGCGCCTCCCAGGAAGGCGGGGAGGGGAGCGCCTGT TTACCCAGGAGGGCTGTGCTGATAGCACGTTCCTCGAGTTTACTTTGCTTTCCTTGAGTTTATTGTAAAGGGGTAAAGTTTTCGGATCCG TCACGTGACCCTGACAGGTCCTGCCTATGGCGCGGCAGACCACCCACGCCGAGGGCCATGGAACTGCTTAATAGAAACAGGCTTGTAATT GTGAGTCCGCGCTGCACTCCGCCGAAAGCCTCCGGCGGCCCAGCGCGCCGGGGTTTTTACACTTTCCGTTCCTTTTGTAAAGACGGAGGA GGAGGAGAAGAAGAAGAAGAAAACGGAGGAGAAGAAAAAGACGACAGGGGAGACAAAGAGACCCGCAGCGACAAGGCAAGGGGGAGACGA GGGAAGACTGGGAGAAGACGGAGGAGCGGAGGACGAGGAAAGGGGGGCCAGGGAAAAAAAAGGAATTGATGTGAAATCCAAGCCCAGCGT CCGCGCCATCGGCACCCGCGCTCCGAGCAGGGGTTGACGGCCGGCTATGGGGAAGGCTACTGGCCGGAAAGCGCCGCTGTGGCTGAGAGC GAAGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGTTGTGGGCCTCCTCATATTTGGGGC CTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGTAAGTCGTGAATTAAA TTATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTGAC CACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAACA TTTGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCTTTACCCTTGTTTGATTATTACACC TTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCC TTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAATAAGGCTGAGGTTGGTCATGGTTA CATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTCAACCAAACCTCTTGATATGGCCCT TGTTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGTGGGTGGCACAGTCAAGAACAGCAC TGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTA TGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATATGTGGAGGTGGTTCATCAGAGTGT CGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATCCTTCTCTGACGTCAGTGTCATCCG CGTGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCT GGCTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAATTTCCTTTAACGCTGCAACAACTCA GGTTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGAATAAAAGAAT CCCTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTTCAT GGCCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCATC TCTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGACACTGGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGAGA AGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGT GGCAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTACTACGGCCCCCGTGATGGGAGGCA GCAGAGAGCACAGACTATGGTCCAGGTGAAGGCCGTGCTGGGCCACCTCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCCAGGACCT GCAGACGGTAGCAGGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCTGCTCTG GGCTCCTGGAGGCCACACGATCGCCTGGGATGTCATCACCCTGATGGCTCACACTGCTGAGATAACTCACGAGATCATTGGCTTTCTTGA CCAGACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGAGCTCCTTAAAGAGCTGCGAACTCA AGTCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGGACAGGTGATGACCTGTGGCCACGC ATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCTAGTATCTATTTTACAAAATGCAGA GCCAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACTCCTGGTGCCCGCCCGGCCAGACCG TCAGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTCAAGCTGCACATCTATTATTTAAAA ATTCAAAGTCTTAGAACCAAGAATTTGGTCATGAACCATTAAAGAATTTAGAGAGAACTTAGCTCTTTTTAGACTCTTTTTAGGAGTCAG GGATCTGGGATAAAGCCACACTGTCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCTCAGGCTTCCCTTGTGTCTCCCTGG ACCTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCTGTATTTGCTAAATGATGCTA ACTGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCAGAAACATTAGAAGGCAGGATTAATT CAGTTAGTTAGTTCTCTTGTTAAATGGAAATGGGAATTGGAAATTCCTGATAAAGAATTGGCCTGGCTGGGTGCAGTGGCTCACACCTGT GATCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATTACTTCAGCCCAGGAGTTCCAGACTGCCTGGCTAACATGGCAATACCCTATCTCT ACTAAAAATACAAAAATTATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCTGAGGCATGAGGATCTCTTGAACCC GGGAGGTGGGAGTTGTAGTGAGCCGAGATCATGACACTGCACTCCAGCCTGGGCAACAGAGCGAGACCATCTCTTAAAAAAAGGCATTGT TAGTGTAATCTCAAGGTTAACATTTATTTCATGTCAGTACAGGGTGCTTTTTCCTTTCAGGGACATTCTGGAATTGTATTGGTTGTACAT TCTTTTGTGTCTATTCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGTATTAGTCTGAGTCTTGGCTCCGTT TTGAGGTATGAGCAAAGTTTTGCTGGATTAGAAGTTAACCTTTAGGGAAATTCCTTATTTTGGTATGTGGCAATGCTAATAGATCCACTG AAGATCTGGAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTAAAGTATTTTGGT GGCAGCTGCCATCATGGTCATTGCCTTCATATAACATGCTTCGTGCTCATGGTCATTGCCTTCATATAACATGCTTCGTGCCATCATGAT CCTTGCCTTCATATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTGAAAAAGGAGCTGCATGCTTCACTGGAGTTGAGGGCCTCTCTCC TGTTCTGACTTTAAGCCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAACCCCTAGAGAGA GGGGCCACTGGGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTCCTGTGTACAGGGTTGGCCTC TTCCTCCTCCCCTGCCAGGCCTCTGCCCATGCCCCTTCCTTCCTTCTCCTGGGACTGGTGAAGCTAGGCATCTGGAAGACTTCTTCCTAG CCTGGAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGGCGGCCTT GCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGCACTGAAGTGCCTGCTGGCTTCATG TGGCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGGGGAGCCACCCCTCGGCCATTCCCTCCACCTCCAAGACA GGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGA ATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACAGGGGCAGCCGCAGGG AGGCAGGGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTGGACCAAGGTCTTCAGAGGTGCGACAGGGTCTGGAATCTGACCTTACTC TAGCAGGAGTTTTTGTAGACTCTCCCTGATAGTTTAGTTTTTGATAAAGCATGCTGGTAAAACCACTACCCTCAGAGAGAGCCAAAAATA CAGAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGAATTTTTTAGCTCTTTAAAATCTGT >In-frame_ENST00000430669_ENST00000289081_TCGA-D7-6822-01A_PTCH1_chr9_98238316_-_FANCC_chr9_97879672_length(amino acids)=736AA_start in transcript=586_stop in transcript=2796 MGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQ LMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTA YLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMH WQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTT LDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVF LLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQLRFALKTYFPYTSPSLAMVLLQDPQDIPRG HWLQTLKHISELLREAVEDQTHGSCGGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRDGRQQRAQTMVQVKAVLGH LLAMSRSSSLSAQDLQTVAGQGTDTDLRAPAQQLIRHLLLNFLLWAPGGHTIAWDVITLMAHTAEITHEIIGFLDQTLYRWNRLGIESPR -------------------------------------------------------------- >In-frame_ENST00000430669_ENST00000375305_TCGA-D7-6822-01A_PTCH1_chr9_98238316_-_FANCC_chr9_97879672_length(transcript)=5449nt_BP=2116nt CGGCCGCGGGGGGCGGGGAGAGGGTGGCTAGGCTCGCGGGAGCTCGCCGGGCAGGGCGCCTCCCAGGAAGGCGGGGAGGGGAGCGCCTGT TTACCCAGGAGGGCTGTGCTGATAGCACGTTCCTCGAGTTTACTTTGCTTTCCTTGAGTTTATTGTAAAGGGGTAAAGTTTTCGGATCCG TCACGTGACCCTGACAGGTCCTGCCTATGGCGCGGCAGACCACCCACGCCGAGGGCCATGGAACTGCTTAATAGAAACAGGCTTGTAATT GTGAGTCCGCGCTGCACTCCGCCGAAAGCCTCCGGCGGCCCAGCGCGCCGGGGTTTTTACACTTTCCGTTCCTTTTGTAAAGACGGAGGA GGAGGAGAAGAAGAAGAAGAAAACGGAGGAGAAGAAAAAGACGACAGGGGAGACAAAGAGACCCGCAGCGACAAGGCAAGGGGGAGACGA GGGAAGACTGGGAGAAGACGGAGGAGCGGAGGACGAGGAAAGGGGGGCCAGGGAAAAAAAAGGAATTGATGTGAAATCCAAGCCCAGCGT CCGCGCCATCGGCACCCGCGCTCCGAGCAGGGGTTGACGGCCGGCTATGGGGAAGGCTACTGGCCGGAAAGCGCCGCTGTGGCTGAGAGC GAAGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGTTGTGGGCCTCCTCATATTTGGGGC CTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGTAAGTCGTGAATTAAA TTATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTGAC CACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAACA TTTGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCTTTACCCTTGTTTGATTATTACACC TTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCC TTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAATAAGGCTGAGGTTGGTCATGGTTA CATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTCAACCAAACCTCTTGATATGGCCCT TGTTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGTGGGTGGCACAGTCAAGAACAGCAC TGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTA TGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATATGTGGAGGTGGTTCATCAGAGTGT CGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATCCTTCTCTGACGTCAGTGTCATCCG CGTGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCT GGCTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAATTTCCTTTAACGCTGCAACAACTCA GGTTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGAATAAAAGAAT CCCTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTTCAT GGCCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCATC TCTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGACACTGGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGAGA AGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGT GGCAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTACTACGGCCCCCGTGATGGGAGGCA GCAGAGAGCACAGACTATGGTCCAGGTGAAGGCCGTGCTGGGCCACCTCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCCAGGACCT GCAGACGGTAGCAGGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCTGCTCTG GGCTCCTGGAGGCCACACGATCGCCTGGGATGTCATCACCCTGATGGCTCACACTGCTGAGATAACTCACGAGATCATTGGCTTTCTTGA CCAGACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGAGCTCCTTAAAGAGCTGCGAACTCA AGTCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGGACAGGTGATGACCTGTGGCCACGC ATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCTAGTATCTATTTTACAAAATGCAGA GCCAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACTCCTGGTGCCCGCCCGGCCAGACCG TCAGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTCAAGCTGCACATCTATTATTTAAAA ATTCAAAGTCTTAGAACCAAGAATTTGGTCATGAACCATTAAAGAATTTAGAGAGAACTTAGCTCTTTTTAGACTCTTTTTAGGAGTCAG GGATCTGGGATAAAGCCACACTGTCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCTCAGGCTTCCCTTGTGTCTCCCTGG ACCTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCTGTATTTGCTAAATGATGCTA ACTGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCAGAAACATTAGAAGGCAGGATTAATT CAGTTAGTTAGTTCTCTTGTTAAATGGAAATGGGAATTGGAAATTCCTGATAAAGAATTGGCCTGGCTGGGTGCAGTGGCTCACACCTGT GATCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATTACTTCAGCCCAGGAGTTCCAGACTGCCTGGCTAACATGGCAATACCCTATCTCT ACTAAAAATACAAAAATTATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCTGAGGCATGAGGATCTCTTGAACCC GGGAGGTGGGAGTTGTAGTGAGCCGAGATCATGACACTGCACTCCAGCCTGGGCAACAGAGCGAGACCATCTCTTAAAAAAAGGCATTGT TAGTGTAATCTCAAGGTTAACATTTATTTCATGTCAGTACAGGGTGCTTTTTCCTTTCAGGGACATTCTGGAATTGTATTGGTTGTACAT TCTTTTGTGTCTATTCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGTATTAGTCTGAGTCTTGGCTCCGTT TTGAGGTATGAGCAAAGTTTTGCTGGATTAGAAGTTAACCTTTAGGGAAATTCCTTATTTTGGTATGTGGCAATGCTAATAGATCCACTG AAGATCTGGAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTAAAGTATTTTGGT GGCAGCTGCCATCATGGTCATTGCCTTCATATAACATGCTTCGTGCTCATGGTCATTGCCTTCATATAACATGCTTCGTGCCATCATGAT CCTTGCCTTCATATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTGAAAAAGGAGCTGCATGCTTCACTGGAGTTGAGGGCCTCTCTCC TGTTCTGACTTTAAGCCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAACCCCTAGAGAGA GGGGCCACTGGGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTCCTGTGTACAGGGTTGGCCTC TTCCTCCTCCCCTGCCAGGCCTCTGCCCATGCCCCTTCCTTCCTTCTCCTGGGACTGGTGAAGCTAGGCATCTGGAAGACTTCTTCCTAG CCTGGAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGGCGGCCTT GCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGCACTGAAGTGCCTGCTGGCTTCATG TGGCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGGGGAGCCACCCCTCGGCCATTCCCTCCACCTCCAAGACA GGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGA ATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACAGGGGCAGCCGCAGGG AGGCAGGGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTGGACCAAGGTCTTCAGAGGTGCGACAGGGTCTGGAATCTGACCTTACTC TAGCAGGAGTTTTTGTAGACTCTCCCTGATAGTTTAGTTTTTGATAAAGCATGCTGGTAAAACCACTACCCTCAGAGAGAGCCAAAAATA CAGAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGAATTTTTTAGCTCTTTAAAATCTGT >In-frame_ENST00000430669_ENST00000375305_TCGA-D7-6822-01A_PTCH1_chr9_98238316_-_FANCC_chr9_97879672_length(amino acids)=736AA_start in transcript=586_stop in transcript=2796 MGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQ LMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTA YLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMH WQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTT LDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVF LLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQLRFALKTYFPYTSPSLAMVLLQDPQDIPRG HWLQTLKHISELLREAVEDQTHGSCGGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRDGRQQRAQTMVQVKAVLGH LLAMSRSSSLSAQDLQTVAGQGTDTDLRAPAQQLIRHLLLNFLLWAPGGHTIAWDVITLMAHTAEITHEIIGFLDQTLYRWNRLGIESPR -------------------------------------------------------------- >In-frame_ENST00000375274_ENST00000289081_TCGA-D7-6822-01A_PTCH1_chr9_98238316_-_FANCC_chr9_97879672_length(transcript)=5204nt_BP=1870nt ACCCAGGAGGGCTGTGCTGATAGCACGTTCCTCGAGTTTACTTTGCTTTCCTTGAGTTTATTGTAAAGGGGTAAAGTTTTCGGATCCGTC ACGTGACCCTGACAGGTCCTGCCTATGGCGCGGCAGACCACCCACGCCGAGGGCCATGGAACTGCTTAATAGAAACAGGCTTGTAATTGT GAGTCCGCGCTGCACTCCGCCGAAAGCCTCCGGCGGCCCAGCGCGCCGGGGTTTTTACACTTTCCGTTCCTTTTGTAAAGACGGAGGAGG AGGAGAAGAAGAAGAAGAAAACGGAGGAGAAGAAAAAGACGACAGGGGAGACAAAGAGACCCGCAGCGACAAGGGGAAGGCTACTGGCCG GAAAGCGCCGCTGTGGCTGAGAGCGAAGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGT TGTGGGCCTCCTCATATTTGGGGCCTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGG AGGACGAGTAAGTCGTGAATTAAATTATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAA AGAAGAAGGTGCTAATGTCCTGACCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTA CAACAGGCAGTGGAAATTGGAACATTTGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCT TTACCCTTGTTTGATTATTACACCTTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCC TTTGCGGTGGACAAACTTCGACCCTTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAA TAAGGCTGAGGTTGGTCATGGTTACATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTC AACCAAACCTCTTGATATGGCCCTTGTTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGT GGGTGGCACAGTCAAGAACAGCACTGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTA CGAGCACTTCAAGGGGTACGAGTATGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATA TGTGGAGGTGGTTCATCAGAGTGTCGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATC CTTCTCTGACGTCAGTGTCATCCGCGTGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTC CAAGTCCCAGGGTGCCGTGGGGCTGGCTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAAT TTCCTTTAACGCTGCAACAACTCAGGTTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAG TGAAACAGGACAGAATAAAAGAATCCCTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCAT CAGCAATGTCACAGCCTTCTTCATGGCCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGCTGCGGTTTGCACTCAAGAC CTACTTTCCTTACACTTCTCCATCTCTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGACACTGGCTCCAGACACTGAA GCATATTTCTGAACTGCTCAGAGAAGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCA CTTCGGAGGATGGGCTGAGATGGTGGCAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTA CTACGGCCCCCGTGATGGGAGGCAGCAGAGAGCACAGACTATGGTCCAGGTGAAGGCCGTGCTGGGCCACCTCCTGGCAATGTCCAGAAG CAGCAGCCTCTCAGCCCAGGACCTGCAGACGGTAGCAGGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCA CCTTCTCCTCAACTTCCTGCTCTGGGCTCCTGGAGGCCACACGATCGCCTGGGATGTCATCACCCTGATGGCTCACACTGCTGAGATAAC TCACGAGATCATTGGCTTTCTTGACCAGACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGA GCTCCTTAAAGAGCTGCGAACTCAAGTCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGG ACAGGTGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCT AGTATCTATTTTACAAAATGCAGAGCCAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACT CCTGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTC AAGCTGCACATCTATTATTTAAAAATTCAAAGTCTTAGAACCAAGAATTTGGTCATGAACCATTAAAGAATTTAGAGAGAACTTAGCTCT TTTTAGACTCTTTTTAGGAGTCAGGGATCTGGGATAAAGCCACACTGTCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCT CAGGCTTCCCTTGTGTCTCCCTGGACCTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCA CTCTGTATTTGCTAAATGATGCTAACTGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCAG AAACATTAGAAGGCAGGATTAATTCAGTTAGTTAGTTCTCTTGTTAAATGGAAATGGGAATTGGAAATTCCTGATAAAGAATTGGCCTGG CTGGGTGCAGTGGCTCACACCTGTGATCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATTACTTCAGCCCAGGAGTTCCAGACTGCCTGG CTAACATGGCAATACCCTATCTCTACTAAAAATACAAAAATTATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCT GAGGCATGAGGATCTCTTGAACCCGGGAGGTGGGAGTTGTAGTGAGCCGAGATCATGACACTGCACTCCAGCCTGGGCAACAGAGCGAGA CCATCTCTTAAAAAAAGGCATTGTTAGTGTAATCTCAAGGTTAACATTTATTTCATGTCAGTACAGGGTGCTTTTTCCTTTCAGGGACAT TCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGT ATTAGTCTGAGTCTTGGCTCCGTTTTGAGGTATGAGCAAAGTTTTGCTGGATTAGAAGTTAACCTTTAGGGAAATTCCTTATTTTGGTAT GTGGCAATGCTAATAGATCCACTGAAGATCTGGAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAG GGTGTGCTGGTAAAGTATTTTGGTGGCAGCTGCCATCATGGTCATTGCCTTCATATAACATGCTTCGTGCTCATGGTCATTGCCTTCATA TAACATGCTTCGTGCCATCATGATCCTTGCCTTCATATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTGAAAAAGGAGCTGCATGCTT CACTGGAGTTGAGGGCCTCTCTCCTGTTCTGACTTTAAGCCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGT GGCAGCAGGGAACCCCTAGAGAGAGGGGCCACTGGGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGT GGTCCTGTGTACAGGGTTGGCCTCTTCCTCCTCCCCTGCCAGGCCTCTGCCCATGCCCCTTCCTTCCTTCTCCTGGGACTGGTGAAGCTA GGCATCTGGAAGACTTCTTCCTAGCCTGGAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCT CACGGGTGCGGTGGAGGCGGCCTTGCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGC ACTGAAGTGCCTGCTGGCTTCATGTGGCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGGGGAGCCACCCCTCG GCCATTCCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGC CTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGC CTGGGCACAGGGGCAGCCGCAGGGAGGCAGGGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTGGACCAAGGTCTTCAGAGGTGCGAC AGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTCTCCCTGATAGTTTAGTTTTTGATAAAGCATGCTGGTAAAACCAC TACCCTCAGAGAGAGCCAAAAATACAGAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGA >In-frame_ENST00000375274_ENST00000289081_TCGA-D7-6822-01A_PTCH1_chr9_98238316_-_FANCC_chr9_97879672_length(amino acids)=801AA_start in transcript=145_stop in transcript=2550 MELLNRNRLVIVSPRCTPPKASGGPARRGFYTFRSFCKDGGGGEEEEENGGEEKDDRGDKETRSDKGKATGRKAPLWLRAKFQRLLFKLG CYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDS ALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKI NYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQ TMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLA YACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECL KRTGASVALTSISNVTAFFMAALIPIPALRAFSLQLRFALKTYFPYTSPSLAMVLLQDPQDIPRGHWLQTLKHISELLREAVEDQTHGSC GGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRDGRQQRAQTMVQVKAVLGHLLAMSRSSSLSAQDLQTVAGQGTDT -------------------------------------------------------------- >In-frame_ENST00000375274_ENST00000375305_TCGA-D7-6822-01A_PTCH1_chr9_98238316_-_FANCC_chr9_97879672_length(transcript)=5203nt_BP=1870nt ACCCAGGAGGGCTGTGCTGATAGCACGTTCCTCGAGTTTACTTTGCTTTCCTTGAGTTTATTGTAAAGGGGTAAAGTTTTCGGATCCGTC ACGTGACCCTGACAGGTCCTGCCTATGGCGCGGCAGACCACCCACGCCGAGGGCCATGGAACTGCTTAATAGAAACAGGCTTGTAATTGT GAGTCCGCGCTGCACTCCGCCGAAAGCCTCCGGCGGCCCAGCGCGCCGGGGTTTTTACACTTTCCGTTCCTTTTGTAAAGACGGAGGAGG AGGAGAAGAAGAAGAAGAAAACGGAGGAGAAGAAAAAGACGACAGGGGAGACAAAGAGACCCGCAGCGACAAGGGGAAGGCTACTGGCCG GAAAGCGCCGCTGTGGCTGAGAGCGAAGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGT TGTGGGCCTCCTCATATTTGGGGCCTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGG AGGACGAGTAAGTCGTGAATTAAATTATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAA AGAAGAAGGTGCTAATGTCCTGACCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTA CAACAGGCAGTGGAAATTGGAACATTTGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCT TTACCCTTGTTTGATTATTACACCTTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCC TTTGCGGTGGACAAACTTCGACCCTTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAA TAAGGCTGAGGTTGGTCATGGTTACATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTC AACCAAACCTCTTGATATGGCCCTTGTTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGT GGGTGGCACAGTCAAGAACAGCACTGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTA CGAGCACTTCAAGGGGTACGAGTATGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATA TGTGGAGGTGGTTCATCAGAGTGTCGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATC CTTCTCTGACGTCAGTGTCATCCGCGTGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTC CAAGTCCCAGGGTGCCGTGGGGCTGGCTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAAT TTCCTTTAACGCTGCAACAACTCAGGTTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAG TGAAACAGGACAGAATAAAAGAATCCCTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCAT CAGCAATGTCACAGCCTTCTTCATGGCCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGCTGCGGTTTGCACTCAAGAC CTACTTTCCTTACACTTCTCCATCTCTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGACACTGGCTCCAGACACTGAA GCATATTTCTGAACTGCTCAGAGAAGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCA CTTCGGAGGATGGGCTGAGATGGTGGCAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTA CTACGGCCCCCGTGATGGGAGGCAGCAGAGAGCACAGACTATGGTCCAGGTGAAGGCCGTGCTGGGCCACCTCCTGGCAATGTCCAGAAG CAGCAGCCTCTCAGCCCAGGACCTGCAGACGGTAGCAGGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCA CCTTCTCCTCAACTTCCTGCTCTGGGCTCCTGGAGGCCACACGATCGCCTGGGATGTCATCACCCTGATGGCTCACACTGCTGAGATAAC TCACGAGATCATTGGCTTTCTTGACCAGACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGA GCTCCTTAAAGAGCTGCGAACTCAAGTCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGG ACAGGTGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCT AGTATCTATTTTACAAAATGCAGAGCCAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACT CCTGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTC AAGCTGCACATCTATTATTTAAAAATTCAAAGTCTTAGAACCAAGAATTTGGTCATGAACCATTAAAGAATTTAGAGAGAACTTAGCTCT TTTTAGACTCTTTTTAGGAGTCAGGGATCTGGGATAAAGCCACACTGTCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCT CAGGCTTCCCTTGTGTCTCCCTGGACCTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCA CTCTGTATTTGCTAAATGATGCTAACTGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCAG AAACATTAGAAGGCAGGATTAATTCAGTTAGTTAGTTCTCTTGTTAAATGGAAATGGGAATTGGAAATTCCTGATAAAGAATTGGCCTGG CTGGGTGCAGTGGCTCACACCTGTGATCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATTACTTCAGCCCAGGAGTTCCAGACTGCCTGG CTAACATGGCAATACCCTATCTCTACTAAAAATACAAAAATTATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCT GAGGCATGAGGATCTCTTGAACCCGGGAGGTGGGAGTTGTAGTGAGCCGAGATCATGACACTGCACTCCAGCCTGGGCAACAGAGCGAGA CCATCTCTTAAAAAAAGGCATTGTTAGTGTAATCTCAAGGTTAACATTTATTTCATGTCAGTACAGGGTGCTTTTTCCTTTCAGGGACAT TCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGT ATTAGTCTGAGTCTTGGCTCCGTTTTGAGGTATGAGCAAAGTTTTGCTGGATTAGAAGTTAACCTTTAGGGAAATTCCTTATTTTGGTAT GTGGCAATGCTAATAGATCCACTGAAGATCTGGAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAG GGTGTGCTGGTAAAGTATTTTGGTGGCAGCTGCCATCATGGTCATTGCCTTCATATAACATGCTTCGTGCTCATGGTCATTGCCTTCATA TAACATGCTTCGTGCCATCATGATCCTTGCCTTCATATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTGAAAAAGGAGCTGCATGCTT CACTGGAGTTGAGGGCCTCTCTCCTGTTCTGACTTTAAGCCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGT GGCAGCAGGGAACCCCTAGAGAGAGGGGCCACTGGGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGT GGTCCTGTGTACAGGGTTGGCCTCTTCCTCCTCCCCTGCCAGGCCTCTGCCCATGCCCCTTCCTTCCTTCTCCTGGGACTGGTGAAGCTA GGCATCTGGAAGACTTCTTCCTAGCCTGGAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCT CACGGGTGCGGTGGAGGCGGCCTTGCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGC ACTGAAGTGCCTGCTGGCTTCATGTGGCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGGGGAGCCACCCCTCG GCCATTCCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGC CTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGC CTGGGCACAGGGGCAGCCGCAGGGAGGCAGGGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTGGACCAAGGTCTTCAGAGGTGCGAC AGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTCTCCCTGATAGTTTAGTTTTTGATAAAGCATGCTGGTAAAACCAC TACCCTCAGAGAGAGCCAAAAATACAGAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGA >In-frame_ENST00000375274_ENST00000375305_TCGA-D7-6822-01A_PTCH1_chr9_98238316_-_FANCC_chr9_97879672_length(amino acids)=801AA_start in transcript=145_stop in transcript=2550 MELLNRNRLVIVSPRCTPPKASGGPARRGFYTFRSFCKDGGGGEEEEENGGEEKDDRGDKETRSDKGKATGRKAPLWLRAKFQRLLFKLG CYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDS ALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKI NYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQ TMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLA YACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECL KRTGASVALTSISNVTAFFMAALIPIPALRAFSLQLRFALKTYFPYTSPSLAMVLLQDPQDIPRGHWLQTLKHISELLREAVEDQTHGSC GGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRDGRQQRAQTMVQVKAVLGHLLAMSRSSSLSAQDLQTVAGQGTDT -------------------------------------------------------------- >In-frame_ENST00000331920_ENST00000289081_TCGA-D7-6822_PTCH1_chr9_98238315_-_FANCC_chr9_97879672_length(transcript)=5362nt_BP=2028nt GAACTGGATGTGGGCAGCGGCGGCCGCAGAGACCTCGGGACCCCCGCGCAATGTGGCAATGGAAGGCGCAGGGTCTGACTCCCCGGCAGC GGCCGCGGCCGCAGCGGCAGCAGCGCCCGCCGTGTGAGCAGCAGCAGCGGCTGGTCTGTCAACCGGAGCCCGAGCCCGAGCAGCCTGCGG CCAGCAGCGTCCTCGCAAGCCGAGCGCCCAGGCGCGCCAGGAGCCCGCAGCAGCGGCAGCAGCGCGCCGGGCCGCCCGGGAAGCCTCCGT CCCCGCGGCGGCGGCGGCGGCGGCGGCAACATGGCCTCGGCTGGTAACGCCGCCGAGCCCCAGGACCGCGGCGGCGGCGGCAGCGGCTGT ATCGGTGCCCCGGGACGGCCGGCTGGAGGCGGGAGGCGCAGACGGACGGGGGGGCTGCGCCGTGCTGCCGCGCCGGACCGGGACTATCTG CACCGGCCCAGCTACTGCGACGCCGCCTTCGCTCTGGAGCAGATTTCCAAGGGGAAGGCTACTGGCCGGAAAGCGCCGCTGTGGCTGAGA GCGAAGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGTTGTGGGCCTCCTCATATTTGGG GCCTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGTAAGTCGTGAATTA AATTATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTG ACCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAA CATTTGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCTTTACCCTTGTTTGATTATTACA CCTTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGAC CCTTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAATAAGGCTGAGGTTGGTCATGGT TACATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTCAACCAAACCTCTTGATATGGCC CTTGTTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGTGGGTGGCACAGTCAAGAACAGC ACTGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAG TATGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATATGTGGAGGTGGTTCATCAGAGT GTCGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATCCTTCTCTGACGTCAGTGTCATC CGCGTGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGG CTGGCTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAATTTCCTTTAACGCTGCAACAACT CAGGTTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGAATAAAAGA ATCCCTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTTC ATGGCCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCA TCTCTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGACACTGGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGA GAAGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATG GTGGCAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTACTACGGCCCCCGTGATGGGAGG CAGCAGAGAGCACAGACTATGGTCCAGGTGAAGGCCGTGCTGGGCCACCTCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCCAGGAC CTGCAGACGGTAGCAGGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCTGCTC TGGGCTCCTGGAGGCCACACGATCGCCTGGGATGTCATCACCCTGATGGCTCACACTGCTGAGATAACTCACGAGATCATTGGCTTTCTT GACCAGACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGAGCTCCTTAAAGAGCTGCGAACT CAAGTCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGGACAGGTGATGACCTGTGGCCAC GCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCTAGTATCTATTTTACAAAATGCA GAGCCAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACTCCTGGTGCCCGCCCGGCCAGAC CGTCAGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTCAAGCTGCACATCTATTATTTAA AAATTCAAAGTCTTAGAACCAAGAATTTGGTCATGAACCATTAAAGAATTTAGAGAGAACTTAGCTCTTTTTAGACTCTTTTTAGGAGTC AGGGATCTGGGATAAAGCCACACTGTCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCTCAGGCTTCCCTTGTGTCTCCCT GGACCTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCTGTATTTGCTAAATGATGC TAACTGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCAGAAACATTAGAAGGCAGGATTAA TTCAGTTAGTTAGTTCTCTTGTTAAATGGAAATGGGAATTGGAAATTCCTGATAAAGAATTGGCCTGGCTGGGTGCAGTGGCTCACACCT GTGATCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATTACTTCAGCCCAGGAGTTCCAGACTGCCTGGCTAACATGGCAATACCCTATCT CTACTAAAAATACAAAAATTATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCTGAGGCATGAGGATCTCTTGAAC CCGGGAGGTGGGAGTTGTAGTGAGCCGAGATCATGACACTGCACTCCAGCCTGGGCAACAGAGCGAGACCATCTCTTAAAAAAAGGCATT GTTAGTGTAATCTCAAGGTTAACATTTATTTCATGTCAGTACAGGGTGCTTTTTCCTTTCAGGGACATTCTGGAATTGTATTGGTTGTAC ATTCTTTTGTGTCTATTCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGTATTAGTCTGAGTCTTGGCTCCG TTTTGAGGTATGAGCAAAGTTTTGCTGGATTAGAAGTTAACCTTTAGGGAAATTCCTTATTTTGGTATGTGGCAATGCTAATAGATCCAC TGAAGATCTGGAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTAAAGTATTTTG GTGGCAGCTGCCATCATGGTCATTGCCTTCATATAACATGCTTCGTGCTCATGGTCATTGCCTTCATATAACATGCTTCGTGCCATCATG ATCCTTGCCTTCATATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTGAAAAAGGAGCTGCATGCTTCACTGGAGTTGAGGGCCTCTCT CCTGTTCTGACTTTAAGCCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAACCCCTAGAGA GAGGGGCCACTGGGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTCCTGTGTACAGGGTTGGCC TCTTCCTCCTCCCCTGCCAGGCCTCTGCCCATGCCCCTTCCTTCCTTCTCCTGGGACTGGTGAAGCTAGGCATCTGGAAGACTTCTTCCT AGCCTGGAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGGCGGCC TTGCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGCACTGAAGTGCCTGCTGGCTTCA TGTGGCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGGGGAGCCACCCCTCGGCCATTCCCTCCACCTCCAAGA CAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAG GAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACAGGGGCAGCCGCAG GGAGGCAGGGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTGGACCAAGGTCTTCAGAGGTGCGACAGGGTCTGGAATCTGACCTTAC TCTAGCAGGAGTTTTTGTAGACTCTCCCTGATAGTTTAGTTTTTGATAAAGCATGCTGGTAAAACCACTACCCTCAGAGAGAGCCAAAAA TACAGAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGAATTTTTTAGCTCTTTAAAATCT >In-frame_ENST00000331920_ENST00000289081_TCGA-D7-6822_PTCH1_chr9_98238315_-_FANCC_chr9_97879672_length(amino acids)=844AA_start in transcript=174_stop in transcript=2708 MRPAASSQAERPGAPGARSSGSSAPGRPGSLRPRGGGGGGGNMASAGNAAEPQDRGGGGSGCIGAPGRPAGGGRRRRTGGLRRAAAPDRD YLHRPSYCDAAFALEQISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSR ELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLI ITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLD MALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVH QSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAA TTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQLRFALKTYFPYT SPSLAMVLLQDPQDIPRGHWLQTLKHISELLREAVEDQTHGSCGGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRD GRQQRAQTMVQVKAVLGHLLAMSRSSSLSAQDLQTVAGQGTDTDLRAPAQQLIRHLLLNFLLWAPGGHTIAWDVITLMAHTAEITHEIIG -------------------------------------------------------------- >In-frame_ENST00000331920_ENST00000375305_TCGA-D7-6822_PTCH1_chr9_98238315_-_FANCC_chr9_97879672_length(transcript)=5361nt_BP=2028nt GAACTGGATGTGGGCAGCGGCGGCCGCAGAGACCTCGGGACCCCCGCGCAATGTGGCAATGGAAGGCGCAGGGTCTGACTCCCCGGCAGC GGCCGCGGCCGCAGCGGCAGCAGCGCCCGCCGTGTGAGCAGCAGCAGCGGCTGGTCTGTCAACCGGAGCCCGAGCCCGAGCAGCCTGCGG CCAGCAGCGTCCTCGCAAGCCGAGCGCCCAGGCGCGCCAGGAGCCCGCAGCAGCGGCAGCAGCGCGCCGGGCCGCCCGGGAAGCCTCCGT CCCCGCGGCGGCGGCGGCGGCGGCGGCAACATGGCCTCGGCTGGTAACGCCGCCGAGCCCCAGGACCGCGGCGGCGGCGGCAGCGGCTGT ATCGGTGCCCCGGGACGGCCGGCTGGAGGCGGGAGGCGCAGACGGACGGGGGGGCTGCGCCGTGCTGCCGCGCCGGACCGGGACTATCTG CACCGGCCCAGCTACTGCGACGCCGCCTTCGCTCTGGAGCAGATTTCCAAGGGGAAGGCTACTGGCCGGAAAGCGCCGCTGTGGCTGAGA GCGAAGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGTTGTGGGCCTCCTCATATTTGGG GCCTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGTAAGTCGTGAATTA AATTATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTG ACCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAA CATTTGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCTTTACCCTTGTTTGATTATTACA CCTTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGAC CCTTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAATAAGGCTGAGGTTGGTCATGGT TACATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTCAACCAAACCTCTTGATATGGCC CTTGTTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGTGGGTGGCACAGTCAAGAACAGC ACTGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAG TATGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATATGTGGAGGTGGTTCATCAGAGT GTCGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATCCTTCTCTGACGTCAGTGTCATC CGCGTGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGG CTGGCTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAATTTCCTTTAACGCTGCAACAACT CAGGTTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGAATAAAAGA ATCCCTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTTC ATGGCCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCA TCTCTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGACACTGGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGA GAAGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATG GTGGCAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTACTACGGCCCCCGTGATGGGAGG CAGCAGAGAGCACAGACTATGGTCCAGGTGAAGGCCGTGCTGGGCCACCTCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCCAGGAC CTGCAGACGGTAGCAGGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCTGCTC TGGGCTCCTGGAGGCCACACGATCGCCTGGGATGTCATCACCCTGATGGCTCACACTGCTGAGATAACTCACGAGATCATTGGCTTTCTT GACCAGACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGAGCTCCTTAAAGAGCTGCGAACT CAAGTCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGGACAGGTGATGACCTGTGGCCAC GCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCTAGTATCTATTTTACAAAATGCA GAGCCAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACTCCTGGTGCCCGCCCGGCCAGAC CGTCAGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTCAAGCTGCACATCTATTATTTAA AAATTCAAAGTCTTAGAACCAAGAATTTGGTCATGAACCATTAAAGAATTTAGAGAGAACTTAGCTCTTTTTAGACTCTTTTTAGGAGTC AGGGATCTGGGATAAAGCCACACTGTCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCTCAGGCTTCCCTTGTGTCTCCCT GGACCTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCTGTATTTGCTAAATGATGC TAACTGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCAGAAACATTAGAAGGCAGGATTAA TTCAGTTAGTTAGTTCTCTTGTTAAATGGAAATGGGAATTGGAAATTCCTGATAAAGAATTGGCCTGGCTGGGTGCAGTGGCTCACACCT GTGATCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATTACTTCAGCCCAGGAGTTCCAGACTGCCTGGCTAACATGGCAATACCCTATCT CTACTAAAAATACAAAAATTATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCTGAGGCATGAGGATCTCTTGAAC CCGGGAGGTGGGAGTTGTAGTGAGCCGAGATCATGACACTGCACTCCAGCCTGGGCAACAGAGCGAGACCATCTCTTAAAAAAAGGCATT GTTAGTGTAATCTCAAGGTTAACATTTATTTCATGTCAGTACAGGGTGCTTTTTCCTTTCAGGGACATTCTGGAATTGTATTGGTTGTAC ATTCTTTTGTGTCTATTCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGTATTAGTCTGAGTCTTGGCTCCG TTTTGAGGTATGAGCAAAGTTTTGCTGGATTAGAAGTTAACCTTTAGGGAAATTCCTTATTTTGGTATGTGGCAATGCTAATAGATCCAC TGAAGATCTGGAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTAAAGTATTTTG GTGGCAGCTGCCATCATGGTCATTGCCTTCATATAACATGCTTCGTGCTCATGGTCATTGCCTTCATATAACATGCTTCGTGCCATCATG ATCCTTGCCTTCATATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTGAAAAAGGAGCTGCATGCTTCACTGGAGTTGAGGGCCTCTCT CCTGTTCTGACTTTAAGCCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAACCCCTAGAGA GAGGGGCCACTGGGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTCCTGTGTACAGGGTTGGCC TCTTCCTCCTCCCCTGCCAGGCCTCTGCCCATGCCCCTTCCTTCCTTCTCCTGGGACTGGTGAAGCTAGGCATCTGGAAGACTTCTTCCT AGCCTGGAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGGCGGCC TTGCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGCACTGAAGTGCCTGCTGGCTTCA TGTGGCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGGGGAGCCACCCCTCGGCCATTCCCTCCACCTCCAAGA CAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAG GAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACAGGGGCAGCCGCAG GGAGGCAGGGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTGGACCAAGGTCTTCAGAGGTGCGACAGGGTCTGGAATCTGACCTTAC TCTAGCAGGAGTTTTTGTAGACTCTCCCTGATAGTTTAGTTTTTGATAAAGCATGCTGGTAAAACCACTACCCTCAGAGAGAGCCAAAAA TACAGAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGAATTTTTTAGCTCTTTAAAATCT >In-frame_ENST00000331920_ENST00000375305_TCGA-D7-6822_PTCH1_chr9_98238315_-_FANCC_chr9_97879672_length(amino acids)=844AA_start in transcript=174_stop in transcript=2708 MRPAASSQAERPGAPGARSSGSSAPGRPGSLRPRGGGGGGGNMASAGNAAEPQDRGGGGSGCIGAPGRPAGGGRRRRTGGLRRAAAPDRD YLHRPSYCDAAFALEQISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSR ELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLI ITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLD MALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVH QSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAA TTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQLRFALKTYFPYT SPSLAMVLLQDPQDIPRGHWLQTLKHISELLREAVEDQTHGSCGGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRD GRQQRAQTMVQVKAVLGHLLAMSRSSSLSAQDLQTVAGQGTDTDLRAPAQQLIRHLLLNFLLWAPGGHTIAWDVITLMAHTAEITHEIIG -------------------------------------------------------------- >In-frame_ENST00000437951_ENST00000289081_TCGA-D7-6822_PTCH1_chr9_98238315_-_FANCC_chr9_97879672_length(transcript)=5358nt_BP=2024nt ACCCAGGAGGGCTGTGCTGATAGCACGTTCCTCGAGTTTACTTTGCTTTCCTTGAGTTTATTGTAAAGGGGTAAAGTTTTCGGATCCGTC ACGTGACCCTGACAGGTCCTGCCTATGGCGCGGCAGACCACCCACGCCGAGGGCCATGGAACTGCTTAATAGAAACAGGCTTGTAATTGT GAGTCCGCGCTGCACTCCGCCGAAAGCCTCCGGCGGCCCAGCGCGCCGGGGTTTTTACACTTTCCGTTCCTTTTGTAAAGACGGAGGAGG AGGAGAAGAAGAAGAAGAAAACGGAGGAGAAGAAAAAGACGACAGGGGAGACAAAGAGACCCGCAGCGACAAGGCAAGGGGGAGACGAGG GAAGACTGGGAGAAGACGGAGGAGCGGAGGACGAGGAAAGGGGGGCCAGGGAAAAAAAAGGAATTGATGTGAAATCCAAGCCCAGCGTCC GCGCCATCGGCACCCGCGCTCCGAGCAGGGGTTGACGGCCGGCTATGGGGAAGGCTACTGGCCGGAAAGCGCCGCTGTGGCTGAGAGCGA AGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGTTGTGGGCCTCCTCATATTTGGGGCCT TCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGTAAGTCGTGAATTAAATT ATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTGACCA CAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAACATT TGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCTTTACCCTTGTTTGATTATTACACCTT TGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCCTT TGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAATAAGGCTGAGGTTGGTCATGGTTACA TGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTCAACCAAACCTCTTGATATGGCCCTTG TTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGTGGGTGGCACAGTCAAGAACAGCACTG GAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTATG TCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATATGTGGAGGTGGTTCATCAGAGTGTCG CACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATCCTTCTCTGACGTCAGTGTCATCCGCG TGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCTGG CTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAATTTCCTTTAACGCTGCAACAACTCAGG TTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGAATAAAAGAATCC CTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTTCATGG CCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCATCTC TTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGACACTGGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGAGAAG CAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGTGG CAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTACTACGGCCCCCGTGATGGGAGGCAGC AGAGAGCACAGACTATGGTCCAGGTGAAGGCCGTGCTGGGCCACCTCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCCAGGACCTGC AGACGGTAGCAGGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCTGCTCTGGG CTCCTGGAGGCCACACGATCGCCTGGGATGTCATCACCCTGATGGCTCACACTGCTGAGATAACTCACGAGATCATTGGCTTTCTTGACC AGACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGAGCTCCTTAAAGAGCTGCGAACTCAAG TCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGGACAGGTGATGACCTGTGGCCACGCAT TTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCTAGTATCTATTTTACAAAATGCAGAGC CAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACTCCTGGTGCCCGCCCGGCCAGACCGTC AGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTCAAGCTGCACATCTATTATTTAAAAAT TCAAAGTCTTAGAACCAAGAATTTGGTCATGAACCATTAAAGAATTTAGAGAGAACTTAGCTCTTTTTAGACTCTTTTTAGGAGTCAGGG ATCTGGGATAAAGCCACACTGTCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCTCAGGCTTCCCTTGTGTCTCCCTGGAC CTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCTGTATTTGCTAAATGATGCTAAC TGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCAGAAACATTAGAAGGCAGGATTAATTCA GTTAGTTAGTTCTCTTGTTAAATGGAAATGGGAATTGGAAATTCCTGATAAAGAATTGGCCTGGCTGGGTGCAGTGGCTCACACCTGTGA TCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATTACTTCAGCCCAGGAGTTCCAGACTGCCTGGCTAACATGGCAATACCCTATCTCTAC TAAAAATACAAAAATTATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCTGAGGCATGAGGATCTCTTGAACCCGG GAGGTGGGAGTTGTAGTGAGCCGAGATCATGACACTGCACTCCAGCCTGGGCAACAGAGCGAGACCATCTCTTAAAAAAAGGCATTGTTA GTGTAATCTCAAGGTTAACATTTATTTCATGTCAGTACAGGGTGCTTTTTCCTTTCAGGGACATTCTGGAATTGTATTGGTTGTACATTC TTTTGTGTCTATTCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGTATTAGTCTGAGTCTTGGCTCCGTTTT GAGGTATGAGCAAAGTTTTGCTGGATTAGAAGTTAACCTTTAGGGAAATTCCTTATTTTGGTATGTGGCAATGCTAATAGATCCACTGAA GATCTGGAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTAAAGTATTTTGGTGG CAGCTGCCATCATGGTCATTGCCTTCATATAACATGCTTCGTGCTCATGGTCATTGCCTTCATATAACATGCTTCGTGCCATCATGATCC TTGCCTTCATATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTGAAAAAGGAGCTGCATGCTTCACTGGAGTTGAGGGCCTCTCTCCTG TTCTGACTTTAAGCCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAACCCCTAGAGAGAGG GGCCACTGGGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTCCTGTGTACAGGGTTGGCCTCTT CCTCCTCCCCTGCCAGGCCTCTGCCCATGCCCCTTCCTTCCTTCTCCTGGGACTGGTGAAGCTAGGCATCTGGAAGACTTCTTCCTAGCC TGGAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGGCGGCCTTGC CGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGCACTGAAGTGCCTGCTGGCTTCATGTG GCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGGGGAGCCACCCCTCGGCCATTCCCTCCACCTCCAAGACAGG TGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGAAT GGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACAGGGGCAGCCGCAGGGAG GCAGGGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTGGACCAAGGTCTTCAGAGGTGCGACAGGGTCTGGAATCTGACCTTACTCTA GCAGGAGTTTTTGTAGACTCTCCCTGATAGTTTAGTTTTTGATAAAGCATGCTGGTAAAACCACTACCCTCAGAGAGAGCCAAAAATACA GAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGAATTTTTTAGCTCTTTAAAATCTGTAA >In-frame_ENST00000437951_ENST00000289081_TCGA-D7-6822_PTCH1_chr9_98238315_-_FANCC_chr9_97879672_length(amino acids)=736AA_start in transcript=494_stop in transcript=2704 MGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQ LMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTA YLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMH WQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTT LDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVF LLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQLRFALKTYFPYTSPSLAMVLLQDPQDIPRG HWLQTLKHISELLREAVEDQTHGSCGGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRDGRQQRAQTMVQVKAVLGH LLAMSRSSSLSAQDLQTVAGQGTDTDLRAPAQQLIRHLLLNFLLWAPGGHTIAWDVITLMAHTAEITHEIIGFLDQTLYRWNRLGIESPR -------------------------------------------------------------- >In-frame_ENST00000437951_ENST00000375305_TCGA-D7-6822_PTCH1_chr9_98238315_-_FANCC_chr9_97879672_length(transcript)=5357nt_BP=2024nt ACCCAGGAGGGCTGTGCTGATAGCACGTTCCTCGAGTTTACTTTGCTTTCCTTGAGTTTATTGTAAAGGGGTAAAGTTTTCGGATCCGTC ACGTGACCCTGACAGGTCCTGCCTATGGCGCGGCAGACCACCCACGCCGAGGGCCATGGAACTGCTTAATAGAAACAGGCTTGTAATTGT GAGTCCGCGCTGCACTCCGCCGAAAGCCTCCGGCGGCCCAGCGCGCCGGGGTTTTTACACTTTCCGTTCCTTTTGTAAAGACGGAGGAGG AGGAGAAGAAGAAGAAGAAAACGGAGGAGAAGAAAAAGACGACAGGGGAGACAAAGAGACCCGCAGCGACAAGGCAAGGGGGAGACGAGG GAAGACTGGGAGAAGACGGAGGAGCGGAGGACGAGGAAAGGGGGGCCAGGGAAAAAAAAGGAATTGATGTGAAATCCAAGCCCAGCGTCC GCGCCATCGGCACCCGCGCTCCGAGCAGGGGTTGACGGCCGGCTATGGGGAAGGCTACTGGCCGGAAAGCGCCGCTGTGGCTGAGAGCGA AGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGTTGTGGGCCTCCTCATATTTGGGGCCT TCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGTAAGTCGTGAATTAAATT ATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTGACCA CAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAACATT TGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCTTTACCCTTGTTTGATTATTACACCTT TGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCCTT TGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAATAAGGCTGAGGTTGGTCATGGTTACA TGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTCAACCAAACCTCTTGATATGGCCCTTG TTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGTGGGTGGCACAGTCAAGAACAGCACTG GAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTATG TCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATATGTGGAGGTGGTTCATCAGAGTGTCG CACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATCCTTCTCTGACGTCAGTGTCATCCGCG TGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCTGG CTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAATTTCCTTTAACGCTGCAACAACTCAGG TTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGAATAAAAGAATCC CTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTTCATGG CCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCATCTC TTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGACACTGGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGAGAAG CAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGTGG CAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTACTACGGCCCCCGTGATGGGAGGCAGC AGAGAGCACAGACTATGGTCCAGGTGAAGGCCGTGCTGGGCCACCTCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCCAGGACCTGC AGACGGTAGCAGGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCTGCTCTGGG CTCCTGGAGGCCACACGATCGCCTGGGATGTCATCACCCTGATGGCTCACACTGCTGAGATAACTCACGAGATCATTGGCTTTCTTGACC AGACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGAGCTCCTTAAAGAGCTGCGAACTCAAG TCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGGACAGGTGATGACCTGTGGCCACGCAT TTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCTAGTATCTATTTTACAAAATGCAGAGC CAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACTCCTGGTGCCCGCCCGGCCAGACCGTC AGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTCAAGCTGCACATCTATTATTTAAAAAT TCAAAGTCTTAGAACCAAGAATTTGGTCATGAACCATTAAAGAATTTAGAGAGAACTTAGCTCTTTTTAGACTCTTTTTAGGAGTCAGGG ATCTGGGATAAAGCCACACTGTCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCTCAGGCTTCCCTTGTGTCTCCCTGGAC CTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCTGTATTTGCTAAATGATGCTAAC TGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCAGAAACATTAGAAGGCAGGATTAATTCA GTTAGTTAGTTCTCTTGTTAAATGGAAATGGGAATTGGAAATTCCTGATAAAGAATTGGCCTGGCTGGGTGCAGTGGCTCACACCTGTGA TCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATTACTTCAGCCCAGGAGTTCCAGACTGCCTGGCTAACATGGCAATACCCTATCTCTAC TAAAAATACAAAAATTATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCTGAGGCATGAGGATCTCTTGAACCCGG GAGGTGGGAGTTGTAGTGAGCCGAGATCATGACACTGCACTCCAGCCTGGGCAACAGAGCGAGACCATCTCTTAAAAAAAGGCATTGTTA GTGTAATCTCAAGGTTAACATTTATTTCATGTCAGTACAGGGTGCTTTTTCCTTTCAGGGACATTCTGGAATTGTATTGGTTGTACATTC TTTTGTGTCTATTCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGTATTAGTCTGAGTCTTGGCTCCGTTTT GAGGTATGAGCAAAGTTTTGCTGGATTAGAAGTTAACCTTTAGGGAAATTCCTTATTTTGGTATGTGGCAATGCTAATAGATCCACTGAA GATCTGGAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTAAAGTATTTTGGTGG CAGCTGCCATCATGGTCATTGCCTTCATATAACATGCTTCGTGCTCATGGTCATTGCCTTCATATAACATGCTTCGTGCCATCATGATCC TTGCCTTCATATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTGAAAAAGGAGCTGCATGCTTCACTGGAGTTGAGGGCCTCTCTCCTG TTCTGACTTTAAGCCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAACCCCTAGAGAGAGG GGCCACTGGGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTCCTGTGTACAGGGTTGGCCTCTT CCTCCTCCCCTGCCAGGCCTCTGCCCATGCCCCTTCCTTCCTTCTCCTGGGACTGGTGAAGCTAGGCATCTGGAAGACTTCTTCCTAGCC TGGAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGGCGGCCTTGC CGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGCACTGAAGTGCCTGCTGGCTTCATGTG GCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGGGGAGCCACCCCTCGGCCATTCCCTCCACCTCCAAGACAGG TGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGAAT GGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACAGGGGCAGCCGCAGGGAG GCAGGGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTGGACCAAGGTCTTCAGAGGTGCGACAGGGTCTGGAATCTGACCTTACTCTA GCAGGAGTTTTTGTAGACTCTCCCTGATAGTTTAGTTTTTGATAAAGCATGCTGGTAAAACCACTACCCTCAGAGAGAGCCAAAAATACA GAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGAATTTTTTAGCTCTTTAAAATCTGTAA >In-frame_ENST00000437951_ENST00000375305_TCGA-D7-6822_PTCH1_chr9_98238315_-_FANCC_chr9_97879672_length(amino acids)=736AA_start in transcript=494_stop in transcript=2704 MGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQ LMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTA YLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMH WQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTT LDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVF LLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQLRFALKTYFPYTSPSLAMVLLQDPQDIPRG HWLQTLKHISELLREAVEDQTHGSCGGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRDGRQQRAQTMVQVKAVLGH LLAMSRSSSLSAQDLQTVAGQGTDTDLRAPAQQLIRHLLLNFLLWAPGGHTIAWDVITLMAHTAEITHEIIGFLDQTLYRWNRLGIESPR -------------------------------------------------------------- >In-frame_ENST00000430669_ENST00000289081_TCGA-D7-6822_PTCH1_chr9_98238315_-_FANCC_chr9_97879672_length(transcript)=5450nt_BP=2116nt CGGCCGCGGGGGGCGGGGAGAGGGTGGCTAGGCTCGCGGGAGCTCGCCGGGCAGGGCGCCTCCCAGGAAGGCGGGGAGGGGAGCGCCTGT TTACCCAGGAGGGCTGTGCTGATAGCACGTTCCTCGAGTTTACTTTGCTTTCCTTGAGTTTATTGTAAAGGGGTAAAGTTTTCGGATCCG TCACGTGACCCTGACAGGTCCTGCCTATGGCGCGGCAGACCACCCACGCCGAGGGCCATGGAACTGCTTAATAGAAACAGGCTTGTAATT GTGAGTCCGCGCTGCACTCCGCCGAAAGCCTCCGGCGGCCCAGCGCGCCGGGGTTTTTACACTTTCCGTTCCTTTTGTAAAGACGGAGGA GGAGGAGAAGAAGAAGAAGAAAACGGAGGAGAAGAAAAAGACGACAGGGGAGACAAAGAGACCCGCAGCGACAAGGCAAGGGGGAGACGA GGGAAGACTGGGAGAAGACGGAGGAGCGGAGGACGAGGAAAGGGGGGCCAGGGAAAAAAAAGGAATTGATGTGAAATCCAAGCCCAGCGT CCGCGCCATCGGCACCCGCGCTCCGAGCAGGGGTTGACGGCCGGCTATGGGGAAGGCTACTGGCCGGAAAGCGCCGCTGTGGCTGAGAGC GAAGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGTTGTGGGCCTCCTCATATTTGGGGC CTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGTAAGTCGTGAATTAAA TTATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTGAC CACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAACA TTTGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCTTTACCCTTGTTTGATTATTACACC TTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCC TTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAATAAGGCTGAGGTTGGTCATGGTTA CATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTCAACCAAACCTCTTGATATGGCCCT TGTTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGTGGGTGGCACAGTCAAGAACAGCAC TGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTA TGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATATGTGGAGGTGGTTCATCAGAGTGT CGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATCCTTCTCTGACGTCAGTGTCATCCG CGTGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCT GGCTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAATTTCCTTTAACGCTGCAACAACTCA GGTTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGAATAAAAGAAT CCCTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTTCAT GGCCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCATC TCTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGACACTGGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGAGA AGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGT GGCAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTACTACGGCCCCCGTGATGGGAGGCA GCAGAGAGCACAGACTATGGTCCAGGTGAAGGCCGTGCTGGGCCACCTCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCCAGGACCT GCAGACGGTAGCAGGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCTGCTCTG GGCTCCTGGAGGCCACACGATCGCCTGGGATGTCATCACCCTGATGGCTCACACTGCTGAGATAACTCACGAGATCATTGGCTTTCTTGA CCAGACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGAGCTCCTTAAAGAGCTGCGAACTCA AGTCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGGACAGGTGATGACCTGTGGCCACGC ATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCTAGTATCTATTTTACAAAATGCAGA GCCAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACTCCTGGTGCCCGCCCGGCCAGACCG TCAGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTCAAGCTGCACATCTATTATTTAAAA ATTCAAAGTCTTAGAACCAAGAATTTGGTCATGAACCATTAAAGAATTTAGAGAGAACTTAGCTCTTTTTAGACTCTTTTTAGGAGTCAG GGATCTGGGATAAAGCCACACTGTCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCTCAGGCTTCCCTTGTGTCTCCCTGG ACCTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCTGTATTTGCTAAATGATGCTA ACTGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCAGAAACATTAGAAGGCAGGATTAATT CAGTTAGTTAGTTCTCTTGTTAAATGGAAATGGGAATTGGAAATTCCTGATAAAGAATTGGCCTGGCTGGGTGCAGTGGCTCACACCTGT GATCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATTACTTCAGCCCAGGAGTTCCAGACTGCCTGGCTAACATGGCAATACCCTATCTCT ACTAAAAATACAAAAATTATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCTGAGGCATGAGGATCTCTTGAACCC GGGAGGTGGGAGTTGTAGTGAGCCGAGATCATGACACTGCACTCCAGCCTGGGCAACAGAGCGAGACCATCTCTTAAAAAAAGGCATTGT TAGTGTAATCTCAAGGTTAACATTTATTTCATGTCAGTACAGGGTGCTTTTTCCTTTCAGGGACATTCTGGAATTGTATTGGTTGTACAT TCTTTTGTGTCTATTCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGTATTAGTCTGAGTCTTGGCTCCGTT TTGAGGTATGAGCAAAGTTTTGCTGGATTAGAAGTTAACCTTTAGGGAAATTCCTTATTTTGGTATGTGGCAATGCTAATAGATCCACTG AAGATCTGGAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTAAAGTATTTTGGT GGCAGCTGCCATCATGGTCATTGCCTTCATATAACATGCTTCGTGCTCATGGTCATTGCCTTCATATAACATGCTTCGTGCCATCATGAT CCTTGCCTTCATATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTGAAAAAGGAGCTGCATGCTTCACTGGAGTTGAGGGCCTCTCTCC TGTTCTGACTTTAAGCCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAACCCCTAGAGAGA GGGGCCACTGGGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTCCTGTGTACAGGGTTGGCCTC TTCCTCCTCCCCTGCCAGGCCTCTGCCCATGCCCCTTCCTTCCTTCTCCTGGGACTGGTGAAGCTAGGCATCTGGAAGACTTCTTCCTAG CCTGGAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGGCGGCCTT GCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGCACTGAAGTGCCTGCTGGCTTCATG TGGCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGGGGAGCCACCCCTCGGCCATTCCCTCCACCTCCAAGACA GGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGA ATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACAGGGGCAGCCGCAGGG AGGCAGGGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTGGACCAAGGTCTTCAGAGGTGCGACAGGGTCTGGAATCTGACCTTACTC TAGCAGGAGTTTTTGTAGACTCTCCCTGATAGTTTAGTTTTTGATAAAGCATGCTGGTAAAACCACTACCCTCAGAGAGAGCCAAAAATA CAGAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGAATTTTTTAGCTCTTTAAAATCTGT >In-frame_ENST00000430669_ENST00000289081_TCGA-D7-6822_PTCH1_chr9_98238315_-_FANCC_chr9_97879672_length(amino acids)=736AA_start in transcript=586_stop in transcript=2796 MGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQ LMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTA YLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMH WQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTT LDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVF LLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQLRFALKTYFPYTSPSLAMVLLQDPQDIPRG HWLQTLKHISELLREAVEDQTHGSCGGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRDGRQQRAQTMVQVKAVLGH LLAMSRSSSLSAQDLQTVAGQGTDTDLRAPAQQLIRHLLLNFLLWAPGGHTIAWDVITLMAHTAEITHEIIGFLDQTLYRWNRLGIESPR -------------------------------------------------------------- >In-frame_ENST00000430669_ENST00000375305_TCGA-D7-6822_PTCH1_chr9_98238315_-_FANCC_chr9_97879672_length(transcript)=5449nt_BP=2116nt CGGCCGCGGGGGGCGGGGAGAGGGTGGCTAGGCTCGCGGGAGCTCGCCGGGCAGGGCGCCTCCCAGGAAGGCGGGGAGGGGAGCGCCTGT TTACCCAGGAGGGCTGTGCTGATAGCACGTTCCTCGAGTTTACTTTGCTTTCCTTGAGTTTATTGTAAAGGGGTAAAGTTTTCGGATCCG TCACGTGACCCTGACAGGTCCTGCCTATGGCGCGGCAGACCACCCACGCCGAGGGCCATGGAACTGCTTAATAGAAACAGGCTTGTAATT GTGAGTCCGCGCTGCACTCCGCCGAAAGCCTCCGGCGGCCCAGCGCGCCGGGGTTTTTACACTTTCCGTTCCTTTTGTAAAGACGGAGGA GGAGGAGAAGAAGAAGAAGAAAACGGAGGAGAAGAAAAAGACGACAGGGGAGACAAAGAGACCCGCAGCGACAAGGCAAGGGGGAGACGA GGGAAGACTGGGAGAAGACGGAGGAGCGGAGGACGAGGAAAGGGGGGCCAGGGAAAAAAAAGGAATTGATGTGAAATCCAAGCCCAGCGT CCGCGCCATCGGCACCCGCGCTCCGAGCAGGGGTTGACGGCCGGCTATGGGGAAGGCTACTGGCCGGAAAGCGCCGCTGTGGCTGAGAGC GAAGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGTTGTGGGCCTCCTCATATTTGGGGC CTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGTAAGTCGTGAATTAAA TTATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTGAC CACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAACA TTTGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCTTTACCCTTGTTTGATTATTACACC TTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCC TTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAATAAGGCTGAGGTTGGTCATGGTTA CATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTCAACCAAACCTCTTGATATGGCCCT TGTTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGTGGGTGGCACAGTCAAGAACAGCAC TGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTA TGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATATGTGGAGGTGGTTCATCAGAGTGT CGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATCCTTCTCTGACGTCAGTGTCATCCG CGTGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCT GGCTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAATTTCCTTTAACGCTGCAACAACTCA GGTTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGAATAAAAGAAT CCCTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTTCAT GGCCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGCTGCGGTTTGCACTCAAGACCTACTTTCCTTACACTTCTCCATC TCTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGACACTGGCTCCAGACACTGAAGCATATTTCTGAACTGCTCAGAGA AGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCACTTCGGAGGATGGGCTGAGATGGT GGCAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTACTACGGCCCCCGTGATGGGAGGCA GCAGAGAGCACAGACTATGGTCCAGGTGAAGGCCGTGCTGGGCCACCTCCTGGCAATGTCCAGAAGCAGCAGCCTCTCAGCCCAGGACCT GCAGACGGTAGCAGGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCACCTTCTCCTCAACTTCCTGCTCTG GGCTCCTGGAGGCCACACGATCGCCTGGGATGTCATCACCCTGATGGCTCACACTGCTGAGATAACTCACGAGATCATTGGCTTTCTTGA CCAGACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGAGCTCCTTAAAGAGCTGCGAACTCA AGTCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGGACAGGTGATGACCTGTGGCCACGC ATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCTAGTATCTATTTTACAAAATGCAGA GCCAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACTCCTGGTGCCCGCCCGGCCAGACCG TCAGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTCAAGCTGCACATCTATTATTTAAAA ATTCAAAGTCTTAGAACCAAGAATTTGGTCATGAACCATTAAAGAATTTAGAGAGAACTTAGCTCTTTTTAGACTCTTTTTAGGAGTCAG GGATCTGGGATAAAGCCACACTGTCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCTCAGGCTTCCCTTGTGTCTCCCTGG ACCTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCACTCTGTATTTGCTAAATGATGCTA ACTGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCAGAAACATTAGAAGGCAGGATTAATT CAGTTAGTTAGTTCTCTTGTTAAATGGAAATGGGAATTGGAAATTCCTGATAAAGAATTGGCCTGGCTGGGTGCAGTGGCTCACACCTGT GATCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATTACTTCAGCCCAGGAGTTCCAGACTGCCTGGCTAACATGGCAATACCCTATCTCT ACTAAAAATACAAAAATTATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCTGAGGCATGAGGATCTCTTGAACCC GGGAGGTGGGAGTTGTAGTGAGCCGAGATCATGACACTGCACTCCAGCCTGGGCAACAGAGCGAGACCATCTCTTAAAAAAAGGCATTGT TAGTGTAATCTCAAGGTTAACATTTATTTCATGTCAGTACAGGGTGCTTTTTCCTTTCAGGGACATTCTGGAATTGTATTGGTTGTACAT TCTTTTGTGTCTATTCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGTATTAGTCTGAGTCTTGGCTCCGTT TTGAGGTATGAGCAAAGTTTTGCTGGATTAGAAGTTAACCTTTAGGGAAATTCCTTATTTTGGTATGTGGCAATGCTAATAGATCCACTG AAGATCTGGAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAGGGTGTGCTGGTAAAGTATTTTGGT GGCAGCTGCCATCATGGTCATTGCCTTCATATAACATGCTTCGTGCTCATGGTCATTGCCTTCATATAACATGCTTCGTGCCATCATGAT CCTTGCCTTCATATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTGAAAAAGGAGCTGCATGCTTCACTGGAGTTGAGGGCCTCTCTCC TGTTCTGACTTTAAGCCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGTGGCAGCAGGGAACCCCTAGAGAGA GGGGCCACTGGGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGTGGTCCTGTGTACAGGGTTGGCCTC TTCCTCCTCCCCTGCCAGGCCTCTGCCCATGCCCCTTCCTTCCTTCTCCTGGGACTGGTGAAGCTAGGCATCTGGAAGACTTCTTCCTAG CCTGGAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCTCACGGGTGCGGTGGAGGCGGCCTT GCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGCACTGAAGTGCCTGCTGGCTTCATG TGGCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGGGGAGCCACCCCTCGGCCATTCCCTCCACCTCCAAGACA GGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGCCTGGGCAGGTGCCACCGGGAAGGA ATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGCCTGGGCACAGGGGCAGCCGCAGGG AGGCAGGGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTGGACCAAGGTCTTCAGAGGTGCGACAGGGTCTGGAATCTGACCTTACTC TAGCAGGAGTTTTTGTAGACTCTCCCTGATAGTTTAGTTTTTGATAAAGCATGCTGGTAAAACCACTACCCTCAGAGAGAGCCAAAAATA CAGAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGAATTTTTTAGCTCTTTAAAATCTGT >In-frame_ENST00000430669_ENST00000375305_TCGA-D7-6822_PTCH1_chr9_98238315_-_FANCC_chr9_97879672_length(amino acids)=736AA_start in transcript=586_stop in transcript=2796 MGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQ LMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTA YLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMH WQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTT LDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVF LLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQLRFALKTYFPYTSPSLAMVLLQDPQDIPRG HWLQTLKHISELLREAVEDQTHGSCGGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRDGRQQRAQTMVQVKAVLGH LLAMSRSSSLSAQDLQTVAGQGTDTDLRAPAQQLIRHLLLNFLLWAPGGHTIAWDVITLMAHTAEITHEIIGFLDQTLYRWNRLGIESPR -------------------------------------------------------------- >In-frame_ENST00000375274_ENST00000289081_TCGA-D7-6822_PTCH1_chr9_98238315_-_FANCC_chr9_97879672_length(transcript)=5204nt_BP=1870nt ACCCAGGAGGGCTGTGCTGATAGCACGTTCCTCGAGTTTACTTTGCTTTCCTTGAGTTTATTGTAAAGGGGTAAAGTTTTCGGATCCGTC ACGTGACCCTGACAGGTCCTGCCTATGGCGCGGCAGACCACCCACGCCGAGGGCCATGGAACTGCTTAATAGAAACAGGCTTGTAATTGT GAGTCCGCGCTGCACTCCGCCGAAAGCCTCCGGCGGCCCAGCGCGCCGGGGTTTTTACACTTTCCGTTCCTTTTGTAAAGACGGAGGAGG AGGAGAAGAAGAAGAAGAAAACGGAGGAGAAGAAAAAGACGACAGGGGAGACAAAGAGACCCGCAGCGACAAGGGGAAGGCTACTGGCCG GAAAGCGCCGCTGTGGCTGAGAGCGAAGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGT TGTGGGCCTCCTCATATTTGGGGCCTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGG AGGACGAGTAAGTCGTGAATTAAATTATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAA AGAAGAAGGTGCTAATGTCCTGACCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTA CAACAGGCAGTGGAAATTGGAACATTTGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCT TTACCCTTGTTTGATTATTACACCTTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCC TTTGCGGTGGACAAACTTCGACCCTTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAA TAAGGCTGAGGTTGGTCATGGTTACATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTC AACCAAACCTCTTGATATGGCCCTTGTTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGT GGGTGGCACAGTCAAGAACAGCACTGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTA CGAGCACTTCAAGGGGTACGAGTATGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATA TGTGGAGGTGGTTCATCAGAGTGTCGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATC CTTCTCTGACGTCAGTGTCATCCGCGTGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTC CAAGTCCCAGGGTGCCGTGGGGCTGGCTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAAT TTCCTTTAACGCTGCAACAACTCAGGTTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAG TGAAACAGGACAGAATAAAAGAATCCCTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCAT CAGCAATGTCACAGCCTTCTTCATGGCCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGCTGCGGTTTGCACTCAAGAC CTACTTTCCTTACACTTCTCCATCTCTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGACACTGGCTCCAGACACTGAA GCATATTTCTGAACTGCTCAGAGAAGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCA CTTCGGAGGATGGGCTGAGATGGTGGCAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTA CTACGGCCCCCGTGATGGGAGGCAGCAGAGAGCACAGACTATGGTCCAGGTGAAGGCCGTGCTGGGCCACCTCCTGGCAATGTCCAGAAG CAGCAGCCTCTCAGCCCAGGACCTGCAGACGGTAGCAGGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCA CCTTCTCCTCAACTTCCTGCTCTGGGCTCCTGGAGGCCACACGATCGCCTGGGATGTCATCACCCTGATGGCTCACACTGCTGAGATAAC TCACGAGATCATTGGCTTTCTTGACCAGACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGA GCTCCTTAAAGAGCTGCGAACTCAAGTCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGG ACAGGTGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCT AGTATCTATTTTACAAAATGCAGAGCCAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACT CCTGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTC AAGCTGCACATCTATTATTTAAAAATTCAAAGTCTTAGAACCAAGAATTTGGTCATGAACCATTAAAGAATTTAGAGAGAACTTAGCTCT TTTTAGACTCTTTTTAGGAGTCAGGGATCTGGGATAAAGCCACACTGTCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCT CAGGCTTCCCTTGTGTCTCCCTGGACCTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCA CTCTGTATTTGCTAAATGATGCTAACTGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCAG AAACATTAGAAGGCAGGATTAATTCAGTTAGTTAGTTCTCTTGTTAAATGGAAATGGGAATTGGAAATTCCTGATAAAGAATTGGCCTGG CTGGGTGCAGTGGCTCACACCTGTGATCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATTACTTCAGCCCAGGAGTTCCAGACTGCCTGG CTAACATGGCAATACCCTATCTCTACTAAAAATACAAAAATTATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCT GAGGCATGAGGATCTCTTGAACCCGGGAGGTGGGAGTTGTAGTGAGCCGAGATCATGACACTGCACTCCAGCCTGGGCAACAGAGCGAGA CCATCTCTTAAAAAAAGGCATTGTTAGTGTAATCTCAAGGTTAACATTTATTTCATGTCAGTACAGGGTGCTTTTTCCTTTCAGGGACAT TCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGT ATTAGTCTGAGTCTTGGCTCCGTTTTGAGGTATGAGCAAAGTTTTGCTGGATTAGAAGTTAACCTTTAGGGAAATTCCTTATTTTGGTAT GTGGCAATGCTAATAGATCCACTGAAGATCTGGAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAG GGTGTGCTGGTAAAGTATTTTGGTGGCAGCTGCCATCATGGTCATTGCCTTCATATAACATGCTTCGTGCTCATGGTCATTGCCTTCATA TAACATGCTTCGTGCCATCATGATCCTTGCCTTCATATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTGAAAAAGGAGCTGCATGCTT CACTGGAGTTGAGGGCCTCTCTCCTGTTCTGACTTTAAGCCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGT GGCAGCAGGGAACCCCTAGAGAGAGGGGCCACTGGGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGT GGTCCTGTGTACAGGGTTGGCCTCTTCCTCCTCCCCTGCCAGGCCTCTGCCCATGCCCCTTCCTTCCTTCTCCTGGGACTGGTGAAGCTA GGCATCTGGAAGACTTCTTCCTAGCCTGGAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCT CACGGGTGCGGTGGAGGCGGCCTTGCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGC ACTGAAGTGCCTGCTGGCTTCATGTGGCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGGGGAGCCACCCCTCG GCCATTCCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGC CTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGC CTGGGCACAGGGGCAGCCGCAGGGAGGCAGGGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTGGACCAAGGTCTTCAGAGGTGCGAC AGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTCTCCCTGATAGTTTAGTTTTTGATAAAGCATGCTGGTAAAACCAC TACCCTCAGAGAGAGCCAAAAATACAGAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGA >In-frame_ENST00000375274_ENST00000289081_TCGA-D7-6822_PTCH1_chr9_98238315_-_FANCC_chr9_97879672_length(amino acids)=801AA_start in transcript=145_stop in transcript=2550 MELLNRNRLVIVSPRCTPPKASGGPARRGFYTFRSFCKDGGGGEEEEENGGEEKDDRGDKETRSDKGKATGRKAPLWLRAKFQRLLFKLG CYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDS ALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKI NYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQ TMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLA YACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECL KRTGASVALTSISNVTAFFMAALIPIPALRAFSLQLRFALKTYFPYTSPSLAMVLLQDPQDIPRGHWLQTLKHISELLREAVEDQTHGSC GGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRDGRQQRAQTMVQVKAVLGHLLAMSRSSSLSAQDLQTVAGQGTDT -------------------------------------------------------------- >In-frame_ENST00000375274_ENST00000375305_TCGA-D7-6822_PTCH1_chr9_98238315_-_FANCC_chr9_97879672_length(transcript)=5203nt_BP=1870nt ACCCAGGAGGGCTGTGCTGATAGCACGTTCCTCGAGTTTACTTTGCTTTCCTTGAGTTTATTGTAAAGGGGTAAAGTTTTCGGATCCGTC ACGTGACCCTGACAGGTCCTGCCTATGGCGCGGCAGACCACCCACGCCGAGGGCCATGGAACTGCTTAATAGAAACAGGCTTGTAATTGT GAGTCCGCGCTGCACTCCGCCGAAAGCCTCCGGCGGCCCAGCGCGCCGGGGTTTTTACACTTTCCGTTCCTTTTGTAAAGACGGAGGAGG AGGAGAAGAAGAAGAAGAAAACGGAGGAGAAGAAAAAGACGACAGGGGAGACAAAGAGACCCGCAGCGACAAGGGGAAGGCTACTGGCCG GAAAGCGCCGCTGTGGCTGAGAGCGAAGTTTCAGAGACTCTTATTTAAACTGGGTTGTTACATTCAAAAAAACTGCGGCAAGTTCTTGGT TGTGGGCCTCCTCATATTTGGGGCCTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGG AGGACGAGTAAGTCGTGAATTAAATTATACTCGCCAGAAGATTGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACCCCTAA AGAAGAAGGTGCTAATGTCCTGACCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTA CAACAGGCAGTGGAAATTGGAACATTTGTGTTACAAATCAGGAGAGCTTATCACAGAAACAGGTTACATGGATCAGATAATAGAATATCT TTACCCTTGTTTGATTATTACACCTTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCC TTTGCGGTGGACAAACTTCGACCCTTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACTATCAAGTGGACAGCTGGGAGGAAATGCTGAA TAAGGCTGAGGTTGGTCATGGTTACATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACAGCCCCCAACAAAAATTC AACCAAACCTCTTGATATGGCCCTTGTTTTGAATGGTGGATGTCATGGCTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGT GGGTGGCACAGTCAAGAACAGCACTGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTA CGAGCACTTCAAGGGGTACGAGTATGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATA TGTGGAGGTGGTTCATCAGAGTGTCGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATC CTTCTCTGACGTCAGTGTCATCCGCGTGGCCAGCGGCTACTTACTCATGCTCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTC CAAGTCCCAGGGTGCCGTGGGGCTGGCTGGCGTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTGGGCCTGTGCTCATTGATCGGAAT TTCCTTTAACGCTGCAACAACTCAGGTTTTGCCATTTCTCGCTCTTGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAG TGAAACAGGACAGAATAAAAGAATCCCTTTTGAGGACAGGACCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCAT CAGCAATGTCACAGCCTTCTTCATGGCCGCGTTAATCCCAATTCCCGCTCTGCGGGCGTTCTCCCTCCAGCTGCGGTTTGCACTCAAGAC CTACTTTCCTTACACTTCTCCATCTCTTGCCATGGTGCTGCTGCAAGACCCTCAAGATATCCCTCGGGGACACTGGCTCCAGACACTGAA GCATATTTCTGAACTGCTCAGAGAAGCAGTTGAAGACCAGACTCATGGGTCCTGCGGAGGTCCCTTTGAGAGCTGGTTCCTGTTCATTCA CTTCGGAGGATGGGCTGAGATGGTGGCAGAGCAATTACTGATGTCGGCAGCCGAACCCCCCACGGCCCTGCTGTGGCTCTTGGCCTTCTA CTACGGCCCCCGTGATGGGAGGCAGCAGAGAGCACAGACTATGGTCCAGGTGAAGGCCGTGCTGGGCCACCTCCTGGCAATGTCCAGAAG CAGCAGCCTCTCAGCCCAGGACCTGCAGACGGTAGCAGGACAGGGCACAGACACAGACCTCAGAGCTCCTGCACAACAGCTGATCAGGCA CCTTCTCCTCAACTTCCTGCTCTGGGCTCCTGGAGGCCACACGATCGCCTGGGATGTCATCACCCTGATGGCTCACACTGCTGAGATAAC TCACGAGATCATTGGCTTTCTTGACCAGACCTTGTACAGATGGAATCGTCTTGGCATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGA GCTCCTTAAAGAGCTGCGAACTCAAGTCTAGAAGGCACGCAGGCCGTGTGGGTGCCCGGCGTGAGGGATCAGGCTCGCCAGGGCCACAGG ACAGGTGATGACCTGTGGCCACGCATTTGTGGAGTAAGTGCCCTCGCTGGGCTGTGAGAATGAGCTGTACACATCTTGGGACAATCTGCT AGTATCTATTTTACAAAATGCAGAGCCAGGTCCCTCAGCCCAGACTCAGTCAGACATGTTCACTAATGACTCAAGTGAGCCTTCGGTACT CCTGGTGCCCGCCCGGCCAGACCGTCAGCTTGATAATTACTAAAGCAAAGGCCTGGGTGGGAGAACAGGTTTCTAGTTTTTACCCAAGTC AAGCTGCACATCTATTATTTAAAAATTCAAAGTCTTAGAACCAAGAATTTGGTCATGAACCATTAAAGAATTTAGAGAGAACTTAGCTCT TTTTAGACTCTTTTTAGGAGTCAGGGATCTGGGATAAAGCCACACTGTCTTGCTGTATGGAGAAATTCTTCAAGGGGAGTCAGGGTCCCT CAGGCTTCCCTTGTGTCTCCCTGGACCTGCCTGACAGGCCACAGGAGCAGACAGCACACCCAAGCCCGGGCCTCCGGCACACTCTTTCCA CTCTGTATTTGCTAAATGATGCTAACTGCTACCAAAAGGCCCTTGGGACATCAGAGGAGCCGGCAGGCGAAGGTAGAGGATGTGTTCCAG AAACATTAGAAGGCAGGATTAATTCAGTTAGTTAGTTCTCTTGTTAAATGGAAATGGGAATTGGAAATTCCTGATAAAGAATTGGCCTGG CTGGGTGCAGTGGCTCACACCTGTGATCCCAGCACTTTGGGAGGCCAAGGCAGGGGGATTACTTCAGCCCAGGAGTTCCAGACTGCCTGG CTAACATGGCAATACCCTATCTCTACTAAAAATACAAAAATTATCGGGGTGCAATGGCATGCATCTGTAATCCCAGCTATTCAAGAGGCT GAGGCATGAGGATCTCTTGAACCCGGGAGGTGGGAGTTGTAGTGAGCCGAGATCATGACACTGCACTCCAGCCTGGGCAACAGAGCGAGA CCATCTCTTAAAAAAAGGCATTGTTAGTGTAATCTCAAGGTTAACATTTATTTCATGTCAGTACAGGGTGCTTTTTCCTTTCAGGGACAT TCTGGAATTGTATTGGTTGTACATTCTTTTGTGTCTATTCTGTTTGTCAAGTGAGTCAAGACTTGCTTTTGTCCATTTTGATTTGTGTGT ATTAGTCTGAGTCTTGGCTCCGTTTTGAGGTATGAGCAAAGTTTTGCTGGATTAGAAGTTAACCTTTAGGGAAATTCCTTATTTTGGTAT GTGGCAATGCTAATAGATCCACTGAAGATCTGGAAAATTCCAGGAACTTTTCACCTGAGCCTTTCTTCTGAGAAATGCTGCAGTCAGAAG GGTGTGCTGGTAAAGTATTTTGGTGGCAGCTGCCATCATGGTCATTGCCTTCATATAACATGCTTCGTGCTCATGGTCATTGCCTTCATA TAACATGCTTCGTGCCATCATGATCCTTGCCTTCATATAACAAACATGCTTCGTCAGAGGTGTTGGGGTTGAAAAAGGAGCTGCATGCTT CACTGGAGTTGAGGGCCTCTCTCCTGTTCTGACTTTAAGCCAGAACTTGTGGCTGGGCCATGGAAGCTGTGACTCCTCTGTGGACATGGT GGCAGCAGGGAACCCCTAGAGAGAGGGGCCACTGGGACCAGGCCTCCTGTTGTGGAGGGACTCCTGGGACAGTCCTCCACCCTGTCCTGT GGTCCTGTGTACAGGGTTGGCCTCTTCCTCCTCCCCTGCCAGGCCTCTGCCCATGCCCCTTCCTTCCTTCTCCTGGGACTGGTGAAGCTA GGCATCTGGAAGACTTCTTCCTAGCCTGGAAGCCCTGACCTCGGCCCATCTGCAGAATCTCCCAGTTCCTTCACAGCTGCCGAGTCCTCT CACGGGTGCGGTGGAGGCGGCCTTGCCGGTGGTGCTTTCTGGGCAGCCAGGGGTTCCTGGGTGGGAGGACTGTCCCTCTGGGGACGTGGC ACTGAAGTGCCTGCTGGCTTCATGTGGCCCTTTGCCCTTTCCCAGCCTGAGAGATGCTCAAAGGTGGGGAGCTGGGGGAGCCACCCCTCG GCCATTCCCTCCACCTCCAAGACAGGTGGCGGCCGGGCAGGCACTCTTAAGCCCACCTCCCCCTCTTGTTGCCTTCGATTTCGGCAAAGC CTGGGCAGGTGCCACCGGGAAGGAATGGCATCCGAGATGCTGGGCGGGGACGCGGCGTGGCCGAGGGGGCCTTGACGGCGTTGGCGGGGC CTGGGCACAGGGGCAGCCGCAGGGAGGCAGGGATGGCAAGGCGTGAAGCCACCCTGGAAGGAACTGGACCAAGGTCTTCAGAGGTGCGAC AGGGTCTGGAATCTGACCTTACTCTAGCAGGAGTTTTTGTAGACTCTCCCTGATAGTTTAGTTTTTGATAAAGCATGCTGGTAAAACCAC TACCCTCAGAGAGAGCCAAAAATACAGAAGAGGCGGAGAGCGCCCCTCCAACCAGGCTGTTATTCCCCTGGACTCCGTGACATCTGTGGA >In-frame_ENST00000375274_ENST00000375305_TCGA-D7-6822_PTCH1_chr9_98238315_-_FANCC_chr9_97879672_length(amino acids)=801AA_start in transcript=145_stop in transcript=2550 MELLNRNRLVIVSPRCTPPKASGGPARRGFYTFRSFCKDGGGGEEEEENGGEEKDDRGDKETRSDKGKATGRKAPLWLRAKFQRLLFKLG CYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDS ALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKI NYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQ TMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLA YACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECL KRTGASVALTSISNVTAFFMAALIPIPALRAFSLQLRFALKTYFPYTSPSLAMVLLQDPQDIPRGHWLQTLKHISELLREAVEDQTHGSC GGPFESWFLFIHFGGWAEMVAEQLLMSAAEPPTALLWLLAFYYGPRDGRQQRAQTMVQVKAVLGHLLAMSRSSSLSAQDLQTVAGQGTDT -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for PTCH1-FANCC |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for PTCH1-FANCC |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for PTCH1-FANCC |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | PTCH1 | C0004779 | Basal Cell Nevus Syndrome | 23 | CLINGEN;CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Hgene | PTCH1 | C1835820 | HOLOPROSENCEPHALY 7 | 5 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | PTCH1 | C0025149 | Medulloblastoma | 3 | CGI;CTD_human |
Hgene | PTCH1 | C0205833 | Medullomyoblastoma | 3 | CTD_human |
Hgene | PTCH1 | C0278510 | Childhood Medulloblastoma | 3 | CTD_human |
Hgene | PTCH1 | C0278876 | Adult Medulloblastoma | 3 | CTD_human |
Hgene | PTCH1 | C0751291 | Desmoplastic Medulloblastoma | 3 | CTD_human |
Hgene | PTCH1 | C1275668 | Melanotic medulloblastoma | 3 | CTD_human |
Hgene | PTCH1 | C1368275 | Pigmented Basal Cell Carcinoma | 3 | CTD_human |
Hgene | PTCH1 | C4721806 | Carcinoma, Basal Cell | 3 | CTD_human |
Hgene | PTCH1 | C0376634 | Craniofacial Abnormalities | 2 | CTD_human |
Hgene | PTCH1 | C2751544 | BASAL CELL CARCINOMA, SUSCEPTIBILITY TO, 1 | 2 | GENOMICS_ENGLAND;UNIPROT |
Hgene | PTCH1 | C0006118 | Brain Neoplasms | 1 | CTD_human |
Hgene | PTCH1 | C0007114 | Malignant neoplasm of skin | 1 | CTD_human |
Hgene | PTCH1 | C0008924 | Cleft upper lip | 1 | CTD_human |
Hgene | PTCH1 | C0008925 | Cleft Palate | 1 | CTD_human |
Hgene | PTCH1 | C0019693 | HIV Infections | 1 | CTD_human |
Hgene | PTCH1 | C0030297 | Pancreatic Neoplasm | 1 | CTD_human |
Hgene | PTCH1 | C0035412 | Rhabdomyosarcoma | 1 | CTD_human |
Hgene | PTCH1 | C0037286 | Skin Neoplasms | 1 | CTD_human |
Hgene | PTCH1 | C0153633 | Malignant neoplasm of brain | 1 | CTD_human |
Hgene | PTCH1 | C0206663 | Neuroectodermal Tumor, Primitive | 1 | CTD_human |
Hgene | PTCH1 | C0238198 | Gastrointestinal Stromal Tumors | 1 | CTD_human |
Hgene | PTCH1 | C0334584 | Spongioblastoma | 1 | CTD_human |
Hgene | PTCH1 | C0334596 | Medulloepithelioma | 1 | CTD_human |
Hgene | PTCH1 | C0346647 | Malignant neoplasm of pancreas | 1 | CTD_human |
Hgene | PTCH1 | C0496899 | Benign neoplasm of brain, unspecified | 1 | CTD_human |
Hgene | PTCH1 | C0700367 | Ependymoblastoma | 1 | CTD_human |
Hgene | PTCH1 | C0750974 | Brain Tumor, Primary | 1 | CTD_human |
Hgene | PTCH1 | C0750977 | Recurrent Brain Neoplasm | 1 | CTD_human |
Hgene | PTCH1 | C0750979 | Primary malignant neoplasm of brain | 1 | CTD_human |
Hgene | PTCH1 | C0751675 | Cerebral Primitive Neuroectodermal Tumor | 1 | CTD_human |
Hgene | PTCH1 | C0812437 | Oculo-dento-digital syndrome | 1 | ORPHANET |
Hgene | PTCH1 | C1527390 | Neoplasms, Intracranial | 1 | CTD_human |
Hgene | PTCH1 | C1834038 | Schilbach-Rott Syndrome | 1 | ORPHANET |
Hgene | PTCH1 | C1837218 | Cleft palate, isolated | 1 | CTD_human |
Hgene | PTCH1 | C3151617 | ANTERIOR SEGMENT DYSGENESIS 7 | 1 | GENOMICS_ENGLAND |
Hgene | PTCH1 | C3179349 | Gastrointestinal Stromal Sarcoma | 1 | CTD_human |
Hgene | PTCH1 | C3711390 | 9q22.3 Microdeletion | 1 | ORPHANET |
Hgene | PTCH1 | C4505456 | HIV Coinfection | 1 | CTD_human |
Tgene | FANCC | C3468041 | FANCONI ANEMIA, COMPLEMENTATION GROUP C | 19 | CLINGEN;CTD_human;GENOMICS_ENGLAND;UNIPROT |
Tgene | FANCC | C0015625 | Fanconi Anemia | 5 | CTD_human;GENOMICS_ENGLAND |
Tgene | FANCC | C0030312 | Pancytopenia | 3 | GENOMICS_ENGLAND |
Tgene | FANCC | C1855710 | Bone marrow hypocellularity | 3 | GENOMICS_ENGLAND |
Tgene | FANCC | C1384666 | hearing impairment | 2 | GENOMICS_ENGLAND |
Tgene | FANCC | C2750866 | Growth retardation, pre- and postnatal | 2 | GENOMICS_ENGLAND |
Tgene | FANCC | C0020459 | Hyperinsulinism | 1 | CTD_human |
Tgene | FANCC | C0023418 | leukemia | 1 | CGI;GENOMICS_ENGLAND |
Tgene | FANCC | C0023465 | Acute monocytic leukemia | 1 | GENOMICS_ENGLAND |
Tgene | FANCC | C0023467 | Leukemia, Myelocytic, Acute | 1 | CGI;GENOMICS_ENGLAND |
Tgene | FANCC | C0265219 | Miller Dieker syndrome | 1 | GENOMICS_ENGLAND |
Tgene | FANCC | C1257963 | Endogenous Hyperinsulinism | 1 | CTD_human |
Tgene | FANCC | C1257964 | Exogenous Hyperinsulinism | 1 | CTD_human |
Tgene | FANCC | C1257965 | Compensatory Hyperinsulinemia | 1 | CTD_human |
Tgene | FANCC | C3463824 | MYELODYSPLASTIC SYNDROME | 1 | GENOMICS_ENGLAND |
Tgene | FANCC | C4228778 | Abnormality of radial ray | 1 | GENOMICS_ENGLAND |