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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:PTPN3-EPB41L4B (FusionGDB2 ID:69836) |
Fusion Gene Summary for PTPN3-EPB41L4B |
Fusion gene summary |
Fusion gene information | Fusion gene name: PTPN3-EPB41L4B | Fusion gene ID: 69836 | Hgene | Tgene | Gene symbol | PTPN3 | EPB41L4B | Gene ID | 5774 | 54566 |
Gene name | protein tyrosine phosphatase non-receptor type 3 | erythrocyte membrane protein band 4.1 like 4B | |
Synonyms | PTP-H1|PTPH1 | CG1|EHM2|LULU2 | |
Cytomap | 9q31.3 | 9q31.3 | |
Type of gene | protein-coding | protein-coding | |
Description | tyrosine-protein phosphatase non-receptor type 3cytoskeletal-associated protein tyrosine phosphataseprotein-tyrosine phosphatase H1 | band 4.1-like protein 4BFERM-containing protein CG1 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | Q9H329 | |
Ensembl transtripts involved in fusion gene | ENST00000412145, ENST00000446349, ENST00000374541, ENST00000262539, ENST00000394827, ENST00000497739, | ENST00000374566, ENST00000374557, | |
Fusion gene scores | * DoF score | 7 X 7 X 6=294 | 10 X 10 X 4=400 |
# samples | 7 | 13 | |
** MAII score | log2(7/294*10)=-2.0703893278914 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(13/400*10)=-1.62148837674627 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PTPN3 [Title/Abstract] AND EPB41L4B [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | EPB41L4B(112042096)-PTPN3(112153841), # samples:2 EPB41L4B(112030671)-PTPN3(112172695), # samples:2 PTPN3(112143932)-EPB41L4B(112042201), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | EPB41L4B-PTPN3 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | PTPN3 | GO:0006470 | protein dephosphorylation | 10364224 |
Hgene | PTPN3 | GO:0045930 | negative regulation of mitotic cell cycle | 10364224 |
Hgene | PTPN3 | GO:0098902 | regulation of membrane depolarization during action potential | 16930557 |
Hgene | PTPN3 | GO:2000649 | regulation of sodium ion transmembrane transporter activity | 16930557 |
Tgene | EPB41L4B | GO:0031032 | actomyosin structure organization | 22006950 |
Tgene | EPB41L4B | GO:0042060 | wound healing | 23664528 |
Fusion gene breakpoints across PTPN3 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across EPB41L4B (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-4H-AAAK-01A | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - |
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Fusion Gene ORF analysis for PTPN3-EPB41L4B |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000412145 | ENST00000374566 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - |
In-frame | ENST00000412145 | ENST00000374557 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - |
In-frame | ENST00000446349 | ENST00000374566 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - |
In-frame | ENST00000446349 | ENST00000374557 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - |
In-frame | ENST00000374541 | ENST00000374566 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - |
In-frame | ENST00000374541 | ENST00000374557 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - |
In-frame | ENST00000262539 | ENST00000374566 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - |
In-frame | ENST00000262539 | ENST00000374557 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - |
In-frame | ENST00000394827 | ENST00000374566 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - |
In-frame | ENST00000394827 | ENST00000374557 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - |
intron-3CDS | ENST00000497739 | ENST00000374566 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - |
intron-3CDS | ENST00000497739 | ENST00000374557 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000412145 | PTPN3 | chr9 | 112143932 | - | ENST00000374566 | EPB41L4B | chr9 | 112042201 | - | 9801 | 4825 | 2518 | 7221 | 1567 |
ENST00000412145 | PTPN3 | chr9 | 112143932 | - | ENST00000374557 | EPB41L4B | chr9 | 112042201 | - | 8007 | 4825 | 2518 | 6075 | 1185 |
ENST00000446349 | PTPN3 | chr9 | 112143932 | - | ENST00000374566 | EPB41L4B | chr9 | 112042201 | - | 9666 | 4690 | 2518 | 7086 | 1522 |
ENST00000446349 | PTPN3 | chr9 | 112143932 | - | ENST00000374557 | EPB41L4B | chr9 | 112042201 | - | 7872 | 4690 | 2518 | 5940 | 1140 |
ENST00000374541 | PTPN3 | chr9 | 112143932 | - | ENST00000374566 | EPB41L4B | chr9 | 112042201 | - | 7745 | 2769 | 105 | 5165 | 1686 |
ENST00000374541 | PTPN3 | chr9 | 112143932 | - | ENST00000374557 | EPB41L4B | chr9 | 112042201 | - | 5951 | 2769 | 105 | 4019 | 1304 |
ENST00000262539 | PTPN3 | chr9 | 112143932 | - | ENST00000374566 | EPB41L4B | chr9 | 112042201 | - | 7535 | 2559 | 357 | 4955 | 1532 |
ENST00000262539 | PTPN3 | chr9 | 112143932 | - | ENST00000374557 | EPB41L4B | chr9 | 112042201 | - | 5741 | 2559 | 357 | 3809 | 1150 |
ENST00000394827 | PTPN3 | chr9 | 112143932 | - | ENST00000374566 | EPB41L4B | chr9 | 112042201 | - | 6522 | 1546 | 229 | 3942 | 1237 |
ENST00000394827 | PTPN3 | chr9 | 112143932 | - | ENST00000374557 | EPB41L4B | chr9 | 112042201 | - | 4728 | 1546 | 229 | 2796 | 855 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000412145 | ENST00000374566 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - | 0.001924817 | 0.9980751 |
ENST00000412145 | ENST00000374557 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - | 0.001093263 | 0.99890673 |
ENST00000446349 | ENST00000374566 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - | 0.00185327 | 0.9981468 |
ENST00000446349 | ENST00000374557 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - | 0.001355108 | 0.9986449 |
ENST00000374541 | ENST00000374566 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - | 0.000139753 | 0.9998603 |
ENST00000374541 | ENST00000374557 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - | 0.000116587 | 0.9998834 |
ENST00000262539 | ENST00000374566 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - | 0.000186129 | 0.99981385 |
ENST00000262539 | ENST00000374557 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - | 0.000171844 | 0.9998281 |
ENST00000394827 | ENST00000374566 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - | 0.000195816 | 0.9998042 |
ENST00000394827 | ENST00000374557 | PTPN3 | chr9 | 112143932 | - | EPB41L4B | chr9 | 112042201 | - | 0.000796881 | 0.99920315 |
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Fusion Genomic Features for PTPN3-EPB41L4B |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for PTPN3-EPB41L4B |
Go to FGviewer for the breakpoints of chr9:112143932-chr9:112042201 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | EPB41L4B |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Up-regulates the activity of the Rho guanine nucleotide exchange factor ARHGEF18 (By similarity). Involved in the regulation of the circumferential actomyosin belt in epithelial cells (PubMed:22006950). Promotes cellular adhesion, migration and motility in vitro and may play a role in wound healing (PubMed:23664528). May have a role in mediating cytoskeletal changes associated with steroid-induced cell differentiation (PubMed:14521927). {ECO:0000250|UniProtKB:Q9JMC8, ECO:0000269|PubMed:14521927, ECO:0000269|PubMed:22006950, ECO:0000269|PubMed:23664528}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PTPN3 | chr9:112143932 | chr9:112042201 | ENST00000374541 | - | 25 | 26 | 29_312 | 888.0 | 914.0 | Domain | FERM |
Hgene | PTPN3 | chr9:112143932 | chr9:112042201 | ENST00000374541 | - | 25 | 26 | 510_582 | 888.0 | 914.0 | Domain | PDZ |
Hgene | PTPN3 | chr9:112143932 | chr9:112042201 | ENST00000412145 | - | 20 | 21 | 29_312 | 757.0 | 783.0 | Domain | FERM |
Hgene | PTPN3 | chr9:112143932 | chr9:112042201 | ENST00000412145 | - | 20 | 21 | 510_582 | 757.0 | 783.0 | Domain | PDZ |
Hgene | PTPN3 | chr9:112143932 | chr9:112042201 | ENST00000446349 | - | 19 | 20 | 29_312 | 712.0 | 738.0 | Domain | FERM |
Hgene | PTPN3 | chr9:112143932 | chr9:112042201 | ENST00000446349 | - | 19 | 20 | 510_582 | 712.0 | 738.0 | Domain | PDZ |
Hgene | PTPN3 | chr9:112143932 | chr9:112042201 | ENST00000374541 | - | 25 | 26 | 842_848 | 888.0 | 914.0 | Region | Substrate binding |
Tgene | EPB41L4B | chr9:112143932 | chr9:112042201 | ENST00000374557 | 0 | 16 | 504_517 | 102.0 | 519.0 | Compositional bias | Note=His-rich | |
Tgene | EPB41L4B | chr9:112143932 | chr9:112042201 | ENST00000374566 | 0 | 26 | 504_517 | 102.0 | 901.0 | Compositional bias | Note=His-rich |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PTPN3 | chr9:112143932 | chr9:112042201 | ENST00000374541 | - | 25 | 26 | 646_901 | 888.0 | 914.0 | Domain | Tyrosine-protein phosphatase |
Hgene | PTPN3 | chr9:112143932 | chr9:112042201 | ENST00000412145 | - | 20 | 21 | 646_901 | 757.0 | 783.0 | Domain | Tyrosine-protein phosphatase |
Hgene | PTPN3 | chr9:112143932 | chr9:112042201 | ENST00000446349 | - | 19 | 20 | 646_901 | 712.0 | 738.0 | Domain | Tyrosine-protein phosphatase |
Hgene | PTPN3 | chr9:112143932 | chr9:112042201 | ENST00000412145 | - | 20 | 21 | 842_848 | 757.0 | 783.0 | Region | Substrate binding |
Hgene | PTPN3 | chr9:112143932 | chr9:112042201 | ENST00000446349 | - | 19 | 20 | 842_848 | 712.0 | 738.0 | Region | Substrate binding |
Tgene | EPB41L4B | chr9:112143932 | chr9:112042201 | ENST00000374557 | 0 | 16 | 85_369 | 102.0 | 519.0 | Domain | FERM | |
Tgene | EPB41L4B | chr9:112143932 | chr9:112042201 | ENST00000374566 | 0 | 26 | 85_369 | 102.0 | 901.0 | Domain | FERM |
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Fusion Gene Sequence for PTPN3-EPB41L4B |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000412145_ENST00000374566_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(transcript)=9801nt_BP=4825nt GAAGGGTGGTATCCCGTTGTGGAGTAGAATGTAACTATGACCTTCTGGGATTTGGGCACCAGATTTATCTTACTGCAACAGGAGCCATGG TGGGAGCCACCCCCATAACTCTTATAGAGCTGGTGGGCCACCAGGACTGCCAGATATATATATATATTTTTTGAAACAGGGTCTTGCTAT GTTGCCCAGACTGGCCTCAAACTCCTGGACTCAAAGGATCCTCCCTCAGCCTCCTGAGTAGCTGGGATTATAGGCACATACCACCACGAC TAGCTGCCAGATCATCTTATCTTGGACCAGGCTTCTACCATTAATTCACATGCTTTAAAAAAATTAAAAATTAAAAAAATGAAAAATAAA AAAACTTAAAAGATTTTACCTATATTCCTGGAACATAGTTATCTTACCCCAGCTTTGTAGTTCCTGTTTAAGGAAATTCCCTCTGAAGGA AATTTTAGCTCTCAAGAGTCAAAGAAGATGTATAGAGGTGGTATCTGTTAGTTTTTGTTTGTTTGTTAAGGATCTAGGCAGAGAGGTCAT TACATTTTTCTGAAGTTGAGGTCACAGGTGGGGTACCCACAAGAGAGGTCATTACATTTCTGAAGTTAGGCATCCCAGGCATCTCTTCTA AAGAACTATCCTGTATTCTAATTGTTAAATAAATATCTTCTTCATTGTGAGCCTCCACAACTGCTGTTTCTGATAAATTTAGATCATTCT TTGCAGAATTTTATATACTGGCAATCTCAAAACTAGGCTCCTTCAAGATTCCTAGGAAGTCTCCCAAGCTCGGGTTGGGTTCCACTATTC TAGTTTCTTTGTGTATGATGCCATGGGGTTGACTCAGAAACTTTGCTCAATATATGACAAGGCAGCATTTGGTGAGTGGTGATCTCCACG TTTATCTTCTCATTTATATCCCTAGGAAGACATACTGATTAGCTGAGCTTGTCAATGAAAGCCCGGGTTCACCATTGGATTATCTATAAC TCTCCTTTCTCTTTTTTTCTCTCAGTAGCATTGTAGGAGGAGAGAACACTTAATTCTGGTTGAATGTCAGCTTGGATAAACATAGAAACA AACTAGAAAGAACTGATGATGTTCTCCTAGGTGGAAAAGATGGAGATTCCAATACCAAATAGGTGTGAATCAGCAAATGTATGTTATACT GTCTCTCAAGGCCAGGTGTTCAATACATTGTGGGTAGTTAATTATAATCAAAGTAATAATATTAGAGTTACGACATGGATCCTAAGCTTT TTAGCCATTAAACATATAAGAAATTTGTAGCATAGTGAGTTTTTTTATAACATGATCATCCAGGTTAAAATAAGACACAATTGACCTCAC ATATCCTATCTGAGCTCCGATTTTGTCATCTGTAAAAATGGAGATAGTGGTACCTACCTTACAGAGTTATGAGGCTGAGATAAGAGGGAA AGTTACAAAGTAGTACCATGTACAAAGCCCGGAACTGTGCAAATAGGAGGTTGTAATACTGTTTGAAGCATTCCCATCTCAAAAAGCCAG TTCCTTGGCCTTTATAAATTTGAAGGAATAATGAAACTGATTTGTTTCAATTGTGAAAATTATTTCTCTCCTGCCCCTGTGCACTTCTGC CCTGTCTATATTAGATTTCAAGAGGTTTCCCTTTTGTCATCTTGGCCAGACAATGGAATGTCTATCCCGTTTGAATCTGGGTTTAAAAAA GCATGGGAGCTAGTGGCCAAGTGTCACATGTATGCCGCATCCCTAAATAGAAGTCTCCCCAGGGCGCTTCCTGACCTGCGCAATGCTGCC GAAGGCCTCCTTTCCCCGCTCCCCAGGCAGAGGAGCAAAGTCACAGGCTGAGGGGCCTGCCACGACTTGCCCACAAAACAGGTCTGGAGT TTGGAAGTTACATTTGCTGGTTGCCCAGAGATGAGTGCAGAATTCAGCTTGGAGGTCCTGGAAACTTCTAGTTTACTGATGTTTATGCTT TTGCTCATGCACCCACAGTTCCTGGGACACAGAATGCTCACCTGGGGGTTTGTACCCCAGCCAAGAAGGTGTCTTCACAGACTCCCCTCC TTTTAGCAACTTCATGCAGATGGAGCTTGGGTGGATGGATCCTGGCACAGTGTTCAGAACAGTGGCCCTGCCAGTGTGTGGGCGCCGCTT GTGCAGAGCCCCTGTGGGTTCTGGTCCTCAAGGGCAGGGGCGCTCACTGACAGCGGAACCCATAGTACCAGCCCATCTTTGGTGGGCTGT TTCCACCCCATTCATCCCTGCTCAGCTCTTCATAGGACAGCCTGTGCTGGCAGAAAATTGCCCCCACCAGTCAAGACGTAGGGCATCAAC ATGAGCCATCAGTAATGACAGGGCAGCTTTGCAGAGCGTAAGGTAGCACCTGATACCTTGGACCAAAACCGTATTTTTATGTATCTTTCA CATGTACAGCTCTTGTCTTTGACTCATCAAACTTTCTTTTTTTTTTTTTTTTGCTTATTTCAGTTTGAGTATGAATTAATGAAAACAATT GTTTCATAGGCACTTGTATTTCTTACAACTGAAGATGGATATTTGCGAAGGAAGGTTAACCTGCCCTCTTAACTCAGCAGTGGTTCTAGC GTCCTATGCCGTACAATCTCATTTTGGAGACTATAATTCTTCCATACATCATCCAGGCTATCTTTCCGATAGTCACTTTATACCCGATCA AAATGAGGACTTTTTAACAAAAGTCGAATCTCTGCATGAGCAGCACAGTGGGCTAAAACAATCAGAAGCAGAATCCTGCTATATCAACAT AGCGCGGACCCTCGACTTCTATGGAGTAGAACTGCACAGTGGTAGGGATCTGCACAATTTAGACCTAATGATTGGAATTGCTTCCGCGGG TGTTGCTGTGTACCGAAAATACATTTGCACAAGTTTCTATCCTTGGGTGAACATTCTCAAAATTTCTTTCAAAAGGAAAAAGTTCTTCAT ACATCAGCGACAGAAACAGGCTGAATCCAGGGAACATATTGTGGCCTTCAACATGCTGAATTACCGATCTTGCAAAAACTTGTGGAAATC CTGTGTTGAGCACCATACGTTCTTTCAGGCAAAGAAGCTACTACCTCAGGAAAAGAATGTTCTGTCTCAGTACTGGACTATGGGCTCTCG GAACACCAAAAAGTCGGTAAATAACCAATATTGCAAAAAGGTGATTGGCGGGATGGTGTGGAACCCAGCCATGCGGAGATCCTTATCAGT GGAGCACTTAGAAACCAAGAGTCTGCCTTCTCGTTCCCCTCCCATTACTCCCAACTGGCGAAGTCCTCGGCTCCGGCACGAAATCCGAAA GCCACGCCACTCTTCTGCAGATAACCTTGCAAATGAAATGACCTACATCACGGAAACGGAAGATGTATTTTACACGTACAAGGGCTCTCT GGCCCCTCAAGACAGCGATTCTGAAGTTTCTCAGAACCGAAGCCCGCACCAAGAGAGTTTATCCGAGAACAATCCGGCACAAAGCTACCT GACCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCCTGCTCACCTGACGGCGTTGATCAGCAGCTCTTAGATGA CTTCCACAGGGTGACCAAAGGGGGCTCCACCGAGGACGCCAGCCAGTACTACTGTGACAAGAATGATAATGGTGACAGCTACTTAGTCTT GATCCGTATCACACCAGATGAAGATGGAAAATTTGGATTTAATCTTAAGGGAGGAGTGGATCAAAAGATGCCTCTTGTGGTATCAAGGAT AAACCCAGAGTCACCTGCGGACACCTGCATTCCTAAGCTGAACGAAGGGGATCAAATCGTGTTAATCAATGGCCGGGACATCTCAGAACA CACGCATGACCAAGTGGTGATGTTCATCAAAGCCAGCCGGGAGTCCCACTCACGGGAGCTGGCCCTGGTGATCAGGAGGAGAGCTGTCCG CTCATTTGCTGACTTCAAGTCTGAAGATGAACTGAACCAGCTTTTCCCCGAAGCCATTTTCCCCATGTGTCCGGAGGGTGGGGACACTTT GGAGGGATCCATGGCACAGCTAAAGAAGGGCCTCGAAAGCGGGACGGTGCTGATCCAGTTTGAGCAACTCTACAGAAAAAAGCCAGGTTT GGCCATCACGTTTGCAAAGCTGCCTCAAAATTTGGACAAAAACCGATATAAAGATGTGCTGCCTTATGACACCACCCGGGTATTATTGCA GGGAAATGAAGATTATATTAATGCAAGTTACGTGAACATGGAAATTCCTGCTGCTAACCTTGTGAACAAGTACATCGCCACTCAGGGGCC CCTGCCGCATACCTGTGCACAGTTTTGGCAGGTTGTCTGGGATCAGAAGTTGTCACTCATTGTCATGTTGACGACTCTCACAGAACGAGG GCGGACCAAATGTCACCAGTACTGGCCAGATCCCCCCGACGTCATGAACCACGGCGGCTTTCACATCCAGTGTCAGTCAGAGGACTGCAC CATCGCCTATGTGTCCCGAGAAATGCTGGTCACAAACACCCAGACCGGGGAAGAACACACAGTGACACATCTCCAGTACGTCGCATGGCC TGACCACGGTGTGCCCGATGACTCCTCCGACTTTCTGGAATTTGTAAACTATGTGAGGTCTCTGAGAGTGGACAGCGAGCCCGTCCTAGT TCACTGCAGTGCTGGAATAGGTCGAACCGGTGTGTTGGTCACTATGGAAACAGCCATGTGCCTAACTGAGAGGAACCTGCCCATTTACCC ACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGTGCAGACATCAAAACATGCCAAAGGCCAGGATTTGTTTGATCAGAT TGTGTACCACTTGGACCTTGTGGAAACAGATTACTTTGGCCTCCAGTTCCTCGACTCTGCCCAGGTTGCGCACTGGCTGGATCATGCCAA ACCCATAAAAAAGCAGATGAAAATTGGACCTGCTTATGCTTTACACTTTCGAGTTAAATACTATTCTTCAGAACCAAACAACCTTCGTGA GGAGTTTACAAGGTACCTGTTTGTTTTACAACTCAGGCATGACATTCTTTCTGGAAAATTGAAATGCCCTTATGAAACAGCTGTGGAATT AGCTGCTCTCTGTCTACAAGCGGAGCTTGGGGAGTGCGAGCTTCCAGAACACACACCAGAGCTTGTGTCTGAGTTTCGGTTCATTCCAAA TCAGACAGAAGCAATGGAATTTGATATCTTCCAGAGATGGAAAGAGTGCAGGGGAAAGAGCCCTGCCCAGGCGGAACTCTCCTATCTGAA TAAAGCGAAGTGGCTGGAAATGTATGGGGTAGACATGCACGTTGTCAGGGGAAGAGATGGCTGTGAATATTCTCTTGGACTGACCCCGAC AGGCATATTAATCTTTGAAGGAGCTAACAAAATAGGCTTATTCTTTTGGCCTAAAATTACCAAAATGGATTTTAAAAAGAGCAAATTGAC ACTCGTGGTGGTCGAGGATGATGATCAGGGACGTGAGCAAGAGCACACGTTTGTGTTCCGGTTAGACAGTGCCAGGACCTGCAAACACCT TTGGAAGTGTGCAGTTGAGCACCACGCATTCTTCCGACTGCGGACGCCAGGAAACAGCAAATCCAATAGATCCGACTTTATCAGGCTGGG CTCTCGCTTCAGATTCAGTGGGCGGACAGAATATCAAGCTACACATGGCTCCAGGTTACGAAGAACCAGCACCTTTGAGAGGAAGCCTAG TAAACGTTATCCATCCCGGAGACATTCAACGTTCAAAGCAAGCAACCCAGTGATAGCAGCCCAGCTCTGCTCTAAAACAAATCCAGAAGT CCATAATTACCAGCCTCAATATCATCCTAATATCCATCCCAGCCAGCCCCGGTGGCATCCTCACTCTCCAAATGTCAGCTACCCGCTCCC TTCCCCAGTGCTTAGCAGCTCGGACCGGTTGCCTTTTGGCATTGAGGAGAATGGGGGCACACCGTTCCTCACCGCAGCTTCAGGAAGGCA TCACCACCAGCACCAGCATCAGCATCAGCACCAGCACCACTCAAACTACAGCCTCTCACTGACCCTGGAGAACAAAGAGGGGCCTCTGAG GTCCCCAAACTCCAGCAGCAAGTCCCTTACAAAACTGAGTCCAGGAACACCTGCCTTGTTCAGTGAAGCCGCTGCCCATCTAAAGAAGCT GGAACTGGAAACTGTGAAGGCTGCTGGACCCTGGCCTCCTCTGCACATCAACATAAACAAGGCTGAAGAAAAGAAAGTCTCGGAGAAAAC TCTTCAGACTCCACTTTTGCCTTCCCCTGTTGCGGATCATGTGAAGTGTAACATTCTGAAAGCCCAGTTGGAAAATGCTTCCCGAGTGAA CATCCAGGGTGGAAAGGAGGAATCACCGTTTGTAAATATCAATAAGAAATCCAGTCTTCAGGACGCTAGTGTAAGAAGTCCTATTCCTAT TCGTGTGGAAACTGCCCAGCCAGCTGTGGAAAAGCCGGAAATCAAGCCTCCCCGAGTGAGGAAGTTAACAAGACAGTATAGTTTTGATGA AGACGACCTCCCTCCAGACCTGGCCGAGGCAGTGGGAGTGACCACATCTACAACCACAAACACCACAACGGCCGCCACACAAGTCTCCGT GCCGCTGCCGTCCCCCAAGGTCCAGAATGTCAGCTCGCCTCACAAGTCAGAAGGCAAAGGCCTGCTGTCCCCTGGGGCCAAGAGCCCCTC TGACCGAGGAGGTGCCTTTACCCTGGAGCCGGGTGATCTTCTGATGGATTTCACAGAAGCCACTCCTCTGGCAGAGCCCGCCAGCAACCC CCACTGTGCCCACTCTCGCTGTTCTCCTCCACTCTCTCTCCCCATGAAGGAAGAGACCACTGGAGTTTGCATGTACCCTCCAATCAAAAC GAGGCTGATAAAAACATTCCCGGTTGATACAATGAACCCGTTTCCTGATACTTTCACCACAGGGCCACAGTTTACTGCAGACTTCAGAGA CAGTAAATTACAGTGCTGTCCTGGCCCGACTTCCCCGCTGATCCCAGCAGCGACCCTGAGGCCTTTGACAGAGACCGTCTCCACAGTGCA GACCATTTACACCACCCGGAAACCTGTTTCTCTGGCAGCCAGTGCAGAGACACTCCGGCAGGAACTGGAGAGAGAGAAGATGATGAAAAG ACTGTTGATGACCGAACTGTGAAATTCTCCCCTTGTCACCTGGAAGATGGCATGGTGCCTTCTGTCCGTCTTCTTTCTTCGGGCTTTGTG TGCTCACTCTAGCACAGCATACAAGTGTGTGCTCTGTTCGCCCAGGTCTCCATGGTTAGTTGAAGCCAATTTCTGGCTTGACTTTTATGG GAAAAGTTATTTTATGTCTCCTAAGCATTAGAGTTTTTCTATTACTCTATGTAGTTGAGACAGGATTTGATAAGTCTAGGAAAAGAAAGA TGGGAAAACGGGATTCCTTTTCAGAAGTACCTGTGTGTATCTGTTAATAACCACAGGGGTTAATATGATGTAGGATCTTTTACTATCAAT TTCAACCATTTGATTTTGTATGATTGAAACTTGCACCGAGCTTTGACTGTTTGTTAAAGAGTCATTTTTAATGAAAGAATAATTCTTTAT TGCTGGTTTTTCATTTACACTGATAAATACACAGATCTTATAAAGTCTTTAACATTCATTTGTATTCAGATGTGAGTAGAAGAACTAAAA AAAGAAAGTTACATATCACTATGACTGAAGGTACTTCAGCTTAATCTGAAATATAATTTAACTTGTGAACTCCTTGGATATGATATTATT TGGAATAAACAGAATTTATCATTGAACCCAAAGTAGGAAATGATAGCTTACATTGTCTAAAAATCCTTACAAGGTTAAGATGATTCAATA TCAAGAAGATTCAGAAAATTATTTCTAAAGTTGATCGATTCATGTCGTATTGATAGAATCTTGACCAGAAGAAATTTTGCTCTTTTTATA TAGTTTCAAGAAATGTGTTTTTAAATTTTTATTAATGCACTTGAACAACTTTGCAGGAATAAAGCAACCCCCTAACCACAAAATATCCCT CTAAATTAGTTCCCTAGCTTTCTCAATGAATACACACATATTTTTACATAGCTATGATCGTTGTGTACATTCTCCTTTGTTTTACTTCTC GGCCTAACACTTGTCTCCTCTTGTCAACACAGATTCTACTCTCACCAATTTAAATGTCTTTATATCCATGTAACATGGGTAACCTCACTT CACCCCATTATTAGATATTTGAGTTATATCTAATTTTTCACTCTTATAAATAGTGCTGCTATGAATGTCTGTAAAAAAAAAAAACTGCTC CTTCTTTTGGATTATTCCCTTAGGAATATCTCCAAAGAGGGATTACAAGGTCAAAGAGCATGAAGTATTTTATAGCTCTTGTTTTATATT GCCAGATTGCTTTCTAGAAAGATCCAATCTTTGGGTTGGAAGGACCTTAAAGGTCATCTAGTTTAGCCTCCCCACCCCCTCTGAATGCTT GAATCCCCTCGACAATTTATGATGCCACCAGCAATGTATAAGCATTTCTGTTTACCAATAGCTCTGCCAGTATTGGGTTTTGCCATTTTT ATTTATTTTTGCTAGTTTAATAGGTATGTATAGTTGTTCTTGAAGAGTTGTTTTATTTCATTAATTGCTAGCAAGGCTGAGCACTTTTCC ATGTGATGATTTACTAGTTGTATTTCCTTGTGTGTAAAATGTTCATTCATTTCTTATGACCACTTGTTAAGAGGAACTGATCTCATATAT TTGTATCAGAACTGTATTTTTATGTTATATTGTATAGTTTGCTCTCCTGCCCCTCTCCTTAAAACTGAATGGTGCCAATAATTTGATACT AATGACTACAAAAAAAGGTAATGCCTCATTTACTAGTATTGTTGTAAAATGAGGAATGTATGTGAATATTCAGATAACCGAGGATTAACC CTTTAAGTGCTGAATCTTTAAAATTTTAATATATTTTTTTTTGAGGGAAATCTTTCTAAAATGTATTACGCACTTCCCTGCCTTAGTAAA CAGAGTATACTGGAGAGTATTTAACCTTTTCTTGATGAGTCATGGTCATGATTATAAACATCAGCCCCTTTTATACCTTGGTACGGTGCA GTGATATCATTAAGAGCTATCAATATGTGTAGGGCTTGGCTTGGCCTTTTATAGGATATTATGCTGTTCTCACTGATGGTTTTTTACTGC TCTCTGCTCTGTCAGTGGAGCTATCCGGGGCAATTGTAGCGTTTGGGTCCTTTTACCCCTATGTCCCCCGGCTATACTTTTAAAACAGCT TTAGCTGTTCTTTATCTTGTGCACATGATACAAAATATGTTCCCGTACAATATGGGGCTGTCACTTCTTGCCAACCCAGCACCCTCTTCC TCTTCTAACCTGCTTTCTGAGGCTTCTGCTCTTCACCTCCTGCTCGCTGATGGAAACCTCCAGGGCAAAGCTGAAGGTTTCTTGGGGAAG CCAGGAAAGCCAGTATTTCCTATGTGTCAGATCTGCTTGGCTTCCAAGAAGGGATGCATGGGCTTTTTGGCCAGTGTTTCCAGGAGGCTC TGGGCTTCCTGCTTCTTCCCCGCTTCCCCCAGAGTTCACAGATGTTGAAGTTTCTGAAGGTTGACGTCACTGGAAGTCTGACCACAAACA >In-frame_ENST00000412145_ENST00000374566_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(amino acids)=1567AA_start in transcript=2518_stop in transcript=7221 MFHRHLYFLQLKMDICEGRLTCPLNSAVVLASYAVQSHFGDYNSSIHHPGYLSDSHFIPDQNEDFLTKVESLHEQHSGLKQSEAESCYIN IARTLDFYGVELHSGRDLHNLDLMIGIASAGVAVYRKYICTSFYPWVNILKISFKRKKFFIHQRQKQAESREHIVAFNMLNYRSCKNLWK SCVEHHTFFQAKKLLPQEKNVLSQYWTMGSRNTKKSVNNQYCKKVIGGMVWNPAMRRSLSVEHLETKSLPSRSPPITPNWRSPRLRHEIR KPRHSSADNLANEMTYITETEDVFYTYKGSLAPQDSDSEVSQNRSPHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCSPDGVDQQLLD DFHRVTKGGSTEDASQYYCDKNDNGDSYLVLIRITPDEDGKFGFNLKGGVDQKMPLVVSRINPESPADTCIPKLNEGDQIVLINGRDISE HTHDQVVMFIKASRESHSRELALVIRRRAVRSFADFKSEDELNQLFPEAIFPMCPEGGDTLEGSMAQLKKGLESGTVLIQFEQLYRKKPG LAITFAKLPQNLDKNRYKDVLPYDTTRVLLQGNEDYINASYVNMEIPAANLVNKYIATQGPLPHTCAQFWQVVWDQKLSLIVMLTTLTER GRTKCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVL VHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMRDQRAMMVQTSKHAKGQDLFDQIVYHLDLVETDYFGLQFLDSAQVAHWLDHA KPIKKQMKIGPAYALHFRVKYYSSEPNNLREEFTRYLFVLQLRHDILSGKLKCPYETAVELAALCLQAELGECELPEHTPELVSEFRFIP NQTEAMEFDIFQRWKECRGKSPAQAELSYLNKAKWLEMYGVDMHVVRGRDGCEYSLGLTPTGILIFEGANKIGLFFWPKITKMDFKKSKL TLVVVEDDDQGREQEHTFVFRLDSARTCKHLWKCAVEHHAFFRLRTPGNSKSNRSDFIRLGSRFRFSGRTEYQATHGSRLRRTSTFERKP SKRYPSRRHSTFKASNPVIAAQLCSKTNPEVHNYQPQYHPNIHPSQPRWHPHSPNVSYPLPSPVLSSSDRLPFGIEENGGTPFLTAASGR HHHQHQHQHQHQHHSNYSLSLTLENKEGPLRSPNSSSKSLTKLSPGTPALFSEAAAHLKKLELETVKAAGPWPPLHININKAEEKKVSEK TLQTPLLPSPVADHVKCNILKAQLENASRVNIQGGKEESPFVNINKKSSLQDASVRSPIPIRVETAQPAVEKPEIKPPRVRKLTRQYSFD EDDLPPDLAEAVGVTTSTTTNTTTAATQVSVPLPSPKVQNVSSPHKSEGKGLLSPGAKSPSDRGGAFTLEPGDLLMDFTEATPLAEPASN PHCAHSRCSPPLSLPMKEETTGVCMYPPIKTRLIKTFPVDTMNPFPDTFTTGPQFTADFRDSKLQCCPGPTSPLIPAATLRPLTETVSTV -------------------------------------------------------------- >In-frame_ENST00000412145_ENST00000374557_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(transcript)=8007nt_BP=4825nt GAAGGGTGGTATCCCGTTGTGGAGTAGAATGTAACTATGACCTTCTGGGATTTGGGCACCAGATTTATCTTACTGCAACAGGAGCCATGG TGGGAGCCACCCCCATAACTCTTATAGAGCTGGTGGGCCACCAGGACTGCCAGATATATATATATATTTTTTGAAACAGGGTCTTGCTAT GTTGCCCAGACTGGCCTCAAACTCCTGGACTCAAAGGATCCTCCCTCAGCCTCCTGAGTAGCTGGGATTATAGGCACATACCACCACGAC TAGCTGCCAGATCATCTTATCTTGGACCAGGCTTCTACCATTAATTCACATGCTTTAAAAAAATTAAAAATTAAAAAAATGAAAAATAAA AAAACTTAAAAGATTTTACCTATATTCCTGGAACATAGTTATCTTACCCCAGCTTTGTAGTTCCTGTTTAAGGAAATTCCCTCTGAAGGA AATTTTAGCTCTCAAGAGTCAAAGAAGATGTATAGAGGTGGTATCTGTTAGTTTTTGTTTGTTTGTTAAGGATCTAGGCAGAGAGGTCAT TACATTTTTCTGAAGTTGAGGTCACAGGTGGGGTACCCACAAGAGAGGTCATTACATTTCTGAAGTTAGGCATCCCAGGCATCTCTTCTA AAGAACTATCCTGTATTCTAATTGTTAAATAAATATCTTCTTCATTGTGAGCCTCCACAACTGCTGTTTCTGATAAATTTAGATCATTCT TTGCAGAATTTTATATACTGGCAATCTCAAAACTAGGCTCCTTCAAGATTCCTAGGAAGTCTCCCAAGCTCGGGTTGGGTTCCACTATTC TAGTTTCTTTGTGTATGATGCCATGGGGTTGACTCAGAAACTTTGCTCAATATATGACAAGGCAGCATTTGGTGAGTGGTGATCTCCACG TTTATCTTCTCATTTATATCCCTAGGAAGACATACTGATTAGCTGAGCTTGTCAATGAAAGCCCGGGTTCACCATTGGATTATCTATAAC TCTCCTTTCTCTTTTTTTCTCTCAGTAGCATTGTAGGAGGAGAGAACACTTAATTCTGGTTGAATGTCAGCTTGGATAAACATAGAAACA AACTAGAAAGAACTGATGATGTTCTCCTAGGTGGAAAAGATGGAGATTCCAATACCAAATAGGTGTGAATCAGCAAATGTATGTTATACT GTCTCTCAAGGCCAGGTGTTCAATACATTGTGGGTAGTTAATTATAATCAAAGTAATAATATTAGAGTTACGACATGGATCCTAAGCTTT TTAGCCATTAAACATATAAGAAATTTGTAGCATAGTGAGTTTTTTTATAACATGATCATCCAGGTTAAAATAAGACACAATTGACCTCAC ATATCCTATCTGAGCTCCGATTTTGTCATCTGTAAAAATGGAGATAGTGGTACCTACCTTACAGAGTTATGAGGCTGAGATAAGAGGGAA AGTTACAAAGTAGTACCATGTACAAAGCCCGGAACTGTGCAAATAGGAGGTTGTAATACTGTTTGAAGCATTCCCATCTCAAAAAGCCAG TTCCTTGGCCTTTATAAATTTGAAGGAATAATGAAACTGATTTGTTTCAATTGTGAAAATTATTTCTCTCCTGCCCCTGTGCACTTCTGC CCTGTCTATATTAGATTTCAAGAGGTTTCCCTTTTGTCATCTTGGCCAGACAATGGAATGTCTATCCCGTTTGAATCTGGGTTTAAAAAA GCATGGGAGCTAGTGGCCAAGTGTCACATGTATGCCGCATCCCTAAATAGAAGTCTCCCCAGGGCGCTTCCTGACCTGCGCAATGCTGCC GAAGGCCTCCTTTCCCCGCTCCCCAGGCAGAGGAGCAAAGTCACAGGCTGAGGGGCCTGCCACGACTTGCCCACAAAACAGGTCTGGAGT TTGGAAGTTACATTTGCTGGTTGCCCAGAGATGAGTGCAGAATTCAGCTTGGAGGTCCTGGAAACTTCTAGTTTACTGATGTTTATGCTT TTGCTCATGCACCCACAGTTCCTGGGACACAGAATGCTCACCTGGGGGTTTGTACCCCAGCCAAGAAGGTGTCTTCACAGACTCCCCTCC TTTTAGCAACTTCATGCAGATGGAGCTTGGGTGGATGGATCCTGGCACAGTGTTCAGAACAGTGGCCCTGCCAGTGTGTGGGCGCCGCTT GTGCAGAGCCCCTGTGGGTTCTGGTCCTCAAGGGCAGGGGCGCTCACTGACAGCGGAACCCATAGTACCAGCCCATCTTTGGTGGGCTGT TTCCACCCCATTCATCCCTGCTCAGCTCTTCATAGGACAGCCTGTGCTGGCAGAAAATTGCCCCCACCAGTCAAGACGTAGGGCATCAAC ATGAGCCATCAGTAATGACAGGGCAGCTTTGCAGAGCGTAAGGTAGCACCTGATACCTTGGACCAAAACCGTATTTTTATGTATCTTTCA CATGTACAGCTCTTGTCTTTGACTCATCAAACTTTCTTTTTTTTTTTTTTTTGCTTATTTCAGTTTGAGTATGAATTAATGAAAACAATT GTTTCATAGGCACTTGTATTTCTTACAACTGAAGATGGATATTTGCGAAGGAAGGTTAACCTGCCCTCTTAACTCAGCAGTGGTTCTAGC GTCCTATGCCGTACAATCTCATTTTGGAGACTATAATTCTTCCATACATCATCCAGGCTATCTTTCCGATAGTCACTTTATACCCGATCA AAATGAGGACTTTTTAACAAAAGTCGAATCTCTGCATGAGCAGCACAGTGGGCTAAAACAATCAGAAGCAGAATCCTGCTATATCAACAT AGCGCGGACCCTCGACTTCTATGGAGTAGAACTGCACAGTGGTAGGGATCTGCACAATTTAGACCTAATGATTGGAATTGCTTCCGCGGG TGTTGCTGTGTACCGAAAATACATTTGCACAAGTTTCTATCCTTGGGTGAACATTCTCAAAATTTCTTTCAAAAGGAAAAAGTTCTTCAT ACATCAGCGACAGAAACAGGCTGAATCCAGGGAACATATTGTGGCCTTCAACATGCTGAATTACCGATCTTGCAAAAACTTGTGGAAATC CTGTGTTGAGCACCATACGTTCTTTCAGGCAAAGAAGCTACTACCTCAGGAAAAGAATGTTCTGTCTCAGTACTGGACTATGGGCTCTCG GAACACCAAAAAGTCGGTAAATAACCAATATTGCAAAAAGGTGATTGGCGGGATGGTGTGGAACCCAGCCATGCGGAGATCCTTATCAGT GGAGCACTTAGAAACCAAGAGTCTGCCTTCTCGTTCCCCTCCCATTACTCCCAACTGGCGAAGTCCTCGGCTCCGGCACGAAATCCGAAA GCCACGCCACTCTTCTGCAGATAACCTTGCAAATGAAATGACCTACATCACGGAAACGGAAGATGTATTTTACACGTACAAGGGCTCTCT GGCCCCTCAAGACAGCGATTCTGAAGTTTCTCAGAACCGAAGCCCGCACCAAGAGAGTTTATCCGAGAACAATCCGGCACAAAGCTACCT GACCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCCTGCTCACCTGACGGCGTTGATCAGCAGCTCTTAGATGA CTTCCACAGGGTGACCAAAGGGGGCTCCACCGAGGACGCCAGCCAGTACTACTGTGACAAGAATGATAATGGTGACAGCTACTTAGTCTT GATCCGTATCACACCAGATGAAGATGGAAAATTTGGATTTAATCTTAAGGGAGGAGTGGATCAAAAGATGCCTCTTGTGGTATCAAGGAT AAACCCAGAGTCACCTGCGGACACCTGCATTCCTAAGCTGAACGAAGGGGATCAAATCGTGTTAATCAATGGCCGGGACATCTCAGAACA CACGCATGACCAAGTGGTGATGTTCATCAAAGCCAGCCGGGAGTCCCACTCACGGGAGCTGGCCCTGGTGATCAGGAGGAGAGCTGTCCG CTCATTTGCTGACTTCAAGTCTGAAGATGAACTGAACCAGCTTTTCCCCGAAGCCATTTTCCCCATGTGTCCGGAGGGTGGGGACACTTT GGAGGGATCCATGGCACAGCTAAAGAAGGGCCTCGAAAGCGGGACGGTGCTGATCCAGTTTGAGCAACTCTACAGAAAAAAGCCAGGTTT GGCCATCACGTTTGCAAAGCTGCCTCAAAATTTGGACAAAAACCGATATAAAGATGTGCTGCCTTATGACACCACCCGGGTATTATTGCA GGGAAATGAAGATTATATTAATGCAAGTTACGTGAACATGGAAATTCCTGCTGCTAACCTTGTGAACAAGTACATCGCCACTCAGGGGCC CCTGCCGCATACCTGTGCACAGTTTTGGCAGGTTGTCTGGGATCAGAAGTTGTCACTCATTGTCATGTTGACGACTCTCACAGAACGAGG GCGGACCAAATGTCACCAGTACTGGCCAGATCCCCCCGACGTCATGAACCACGGCGGCTTTCACATCCAGTGTCAGTCAGAGGACTGCAC CATCGCCTATGTGTCCCGAGAAATGCTGGTCACAAACACCCAGACCGGGGAAGAACACACAGTGACACATCTCCAGTACGTCGCATGGCC TGACCACGGTGTGCCCGATGACTCCTCCGACTTTCTGGAATTTGTAAACTATGTGAGGTCTCTGAGAGTGGACAGCGAGCCCGTCCTAGT TCACTGCAGTGCTGGAATAGGTCGAACCGGTGTGTTGGTCACTATGGAAACAGCCATGTGCCTAACTGAGAGGAACCTGCCCATTTACCC ACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGTGCAGACATCAAAACATGCCAAAGGCCAGGATTTGTTTGATCAGAT TGTGTACCACTTGGACCTTGTGGAAACAGATTACTTTGGCCTCCAGTTCCTCGACTCTGCCCAGGTTGCGCACTGGCTGGATCATGCCAA ACCCATAAAAAAGCAGATGAAAATTGGACCTGCTTATGCTTTACACTTTCGAGTTAAATACTATTCTTCAGAACCAAACAACCTTCGTGA GGAGTTTACAAGGTACCTGTTTGTTTTACAACTCAGGCATGACATTCTTTCTGGAAAATTGAAATGCCCTTATGAAACAGCTGTGGAATT AGCTGCTCTCTGTCTACAAGCGGAGCTTGGGGAGTGCGAGCTTCCAGAACACACACCAGAGCTTGTGTCTGAGTTTCGGTTCATTCCAAA TCAGACAGAAGCAATGGAATTTGATATCTTCCAGAGATGGAAAGAGTGCAGGGGAAAGAGCCCTGCCCAGGCGGAACTCTCCTATCTGAA TAAAGCGAAGTGGCTGGAAATGTATGGGGTAGACATGCACGTTGTCAGGGGAAGAGATGGCTGTGAATATTCTCTTGGACTGACCCCGAC AGGCATATTAATCTTTGAAGGAGCTAACAAAATAGGCTTATTCTTTTGGCCTAAAATTACCAAAATGGATTTTAAAAAGAGCAAATTGAC ACTCGTGGTGGTCGAGGATGATGATCAGGGACGTGAGCAAGAGCACACGTTTGTGTTCCGGTTAGACAGTGCCAGGACCTGCAAACACCT TTGGAAGTGTGCAGTTGAGCACCACGCATTCTTCCGACTGCGGACGCCAGGAAACAGCAAATCCAATAGATCCGACTTTATCAGGCTGGG CTCTCGCTTCAGATTCAGTGGGCGGACAGAATATCAAGCTACACATGGCTCCAGGTTACGAAGAACCAGCACCTTTGAGAGGAAGCCTAG TAAACGTTATCCATCCCGGAGACATTCAACGTTCAAAGCAAGCAACCCAGTGATAGCAGCCCAGCTCTGCTCTAAAACAAATCCAGAAGT CCATAATTACCAGCCTCAATATCATCCTAATATCCATCCCAGCCAGCCCCGGTGGCATCCTCACTCTCCAAATGTCAGGCCATCCTTTCA GGATGACAGGTCGCATTGGAAAGCATCGGCCAGTGGAGATGACAGCCATTTTGATTATGTCCACGACCAGAACCAGAAGAACTTAGGAGG GATGCAAAGTATGATGTATCGAGATAAACTCATGACTGCACTTTGAGAGACTGAAGCATCTCTCTTCCATTCACCTTCATAGTTTCATTG CATTCCATGAAAAGTGTCTTGGCCTCAGATGGATGGATGTGTTTGGACGAGTGTCTTTAAGGAGTAGTCCTGAAAGGTGTTTTTGGTGTC CATGTAAATATTTGAAGATAAAACCACTATAGCTTGTCATAATTTACTGTTGACTGCATTCTCATTAAAATGAAGGTAAAGGCTCAGGAA TCATATTGATGTTCTGATTTTAAAATTGGAGTCAAAGTCTATGTTTATCATTTTACTATGTTCCTGATGTTCTTTGTTATTTAATTAATG GGAGCAAATAAAACCAGAAGAGCTTGGGAAGATTGCTCAGCATATATTCCTGTCGTAGAAGTTGAGATTGCTAGGGTCCAGTTTCCCTAG TGTGGCCTGGACGAGTCATTTCCCCTTCATTGACCTCATTTTCCCCATCTGAAAAGAGAGGGTTGGACTAAGTGATCTCCAAGGTCCTTT CCAACTCTAAAATTCTGCAATTTGTTAACATTTCATTTTGTTTAGGTTGAGGACATACATTCAAACTAATTTTATCACAAGGAAAACTGC AATACCCACTTCCTTGACAGAGTTACTCCTTTCAGAAGCTAAATAAAGTATATAACTTATTAGATGTTATATAGATACAGGGGGACTTTG AATTTCACATCTTAAAGCAGTTGAGCTACTTTGAATTTAAGCAGTCGTACTAATCTTAAATTGCATAGCATTTGTTTTGATCGAATTTGC TGCTCAAGTATGGGAATAATTTTTAATGTCTTAATGATTGGTGCTGCTAACTTGCGTGATTTCAGAAGACATAATTGTGAATACACACTG TCAGAATTGGGGGATTGGTTTTTACCCTAGACTTCACTCTTAAAAAGCAACGTGCAATCAAGATCATTTATGGCTCAAATGAAAGCATAT AAGGTTTTCTTGAAGTTGTGCCAAAGCATTCTGTAGAGTAGGATGAGATGGTTGTTGCCCTAGTCTGTTGGTAGAACCAGAAATCAATAT GTTGTCTTTTAGGTTAAAGCTTGTACCAAAATATTTATTTCCCCCATTTCAAGCCCTGAGTCAAACATTTTTTTCTCTTAATAATAGACC TGAAATGTTTTATTAGTATTTCTGTGAAATCAGTTGATTCTTGTGCCATTTTTGTATATGTAATTGTAATTTTGCCCATGTTAGGCCCTC TAAAAAATGTTTGACATCCTTTGAGATATTTTATTACTAAAATCTGATCTTTTTTGGCTACTGCAAAAATCTATTCAGCAAGAAGGTATC AGCTGCATACCTTGCACAGTGGAGCTGACTACCTATAAACTCTCCCTAAGGCATTTGTTTACAGGTGTATTCCATTTTAGCAGACGTTCT GATGCTCAGTGTATGTGCTGCATACAAATAAATGTGTTCTGAATCTTTTCATCTTATTGATAGCATTTTTACAAATGTGTTTCCAAGGAA TAAAGATTATTCTTGCTTTTTTTTTGACTCCATCTTCATTTTTTTTAAATTGATTCTTGTTGCTATGCAGAAGTCTCATTTGTGAATGAC CTTGGTAACAGAACAGTTGGCTTTTGGAAGTCTGAAGGTGAGCATTCAGTTAGGTGGGTGGAGCAAGATCATCCTAGAATGAGGCTGCTC TTGGCAAGAGTGGATCTTATAGGCACAGCAGCTGATGCCTTTCTTCATCTGGGGCAACTCTGGTGAAGGTTGTCCTGCCTGTCACAGGTG CTGAGTAGAGAGAAGTGGTGGCAGTGGGATTTCCTCAGTAATAGTCCTGTAAAGGTACGTGTTTGTCCTGGCTACTTGTGCTCTTCCTGG >In-frame_ENST00000412145_ENST00000374557_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(amino acids)=1185AA_start in transcript=2518_stop in transcript=6075 MFHRHLYFLQLKMDICEGRLTCPLNSAVVLASYAVQSHFGDYNSSIHHPGYLSDSHFIPDQNEDFLTKVESLHEQHSGLKQSEAESCYIN IARTLDFYGVELHSGRDLHNLDLMIGIASAGVAVYRKYICTSFYPWVNILKISFKRKKFFIHQRQKQAESREHIVAFNMLNYRSCKNLWK SCVEHHTFFQAKKLLPQEKNVLSQYWTMGSRNTKKSVNNQYCKKVIGGMVWNPAMRRSLSVEHLETKSLPSRSPPITPNWRSPRLRHEIR KPRHSSADNLANEMTYITETEDVFYTYKGSLAPQDSDSEVSQNRSPHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCSPDGVDQQLLD DFHRVTKGGSTEDASQYYCDKNDNGDSYLVLIRITPDEDGKFGFNLKGGVDQKMPLVVSRINPESPADTCIPKLNEGDQIVLINGRDISE HTHDQVVMFIKASRESHSRELALVIRRRAVRSFADFKSEDELNQLFPEAIFPMCPEGGDTLEGSMAQLKKGLESGTVLIQFEQLYRKKPG LAITFAKLPQNLDKNRYKDVLPYDTTRVLLQGNEDYINASYVNMEIPAANLVNKYIATQGPLPHTCAQFWQVVWDQKLSLIVMLTTLTER GRTKCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVL VHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMRDQRAMMVQTSKHAKGQDLFDQIVYHLDLVETDYFGLQFLDSAQVAHWLDHA KPIKKQMKIGPAYALHFRVKYYSSEPNNLREEFTRYLFVLQLRHDILSGKLKCPYETAVELAALCLQAELGECELPEHTPELVSEFRFIP NQTEAMEFDIFQRWKECRGKSPAQAELSYLNKAKWLEMYGVDMHVVRGRDGCEYSLGLTPTGILIFEGANKIGLFFWPKITKMDFKKSKL TLVVVEDDDQGREQEHTFVFRLDSARTCKHLWKCAVEHHAFFRLRTPGNSKSNRSDFIRLGSRFRFSGRTEYQATHGSRLRRTSTFERKP SKRYPSRRHSTFKASNPVIAAQLCSKTNPEVHNYQPQYHPNIHPSQPRWHPHSPNVRPSFQDDRSHWKASASGDDSHFDYVHDQNQKNLG -------------------------------------------------------------- >In-frame_ENST00000446349_ENST00000374566_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(transcript)=9666nt_BP=4690nt GAAGGGTGGTATCCCGTTGTGGAGTAGAATGTAACTATGACCTTCTGGGATTTGGGCACCAGATTTATCTTACTGCAACAGGAGCCATGG TGGGAGCCACCCCCATAACTCTTATAGAGCTGGTGGGCCACCAGGACTGCCAGATATATATATATATTTTTTGAAACAGGGTCTTGCTAT GTTGCCCAGACTGGCCTCAAACTCCTGGACTCAAAGGATCCTCCCTCAGCCTCCTGAGTAGCTGGGATTATAGGCACATACCACCACGAC TAGCTGCCAGATCATCTTATCTTGGACCAGGCTTCTACCATTAATTCACATGCTTTAAAAAAATTAAAAATTAAAAAAATGAAAAATAAA AAAACTTAAAAGATTTTACCTATATTCCTGGAACATAGTTATCTTACCCCAGCTTTGTAGTTCCTGTTTAAGGAAATTCCCTCTGAAGGA AATTTTAGCTCTCAAGAGTCAAAGAAGATGTATAGAGGTGGTATCTGTTAGTTTTTGTTTGTTTGTTAAGGATCTAGGCAGAGAGGTCAT TACATTTTTCTGAAGTTGAGGTCACAGGTGGGGTACCCACAAGAGAGGTCATTACATTTCTGAAGTTAGGCATCCCAGGCATCTCTTCTA AAGAACTATCCTGTATTCTAATTGTTAAATAAATATCTTCTTCATTGTGAGCCTCCACAACTGCTGTTTCTGATAAATTTAGATCATTCT TTGCAGAATTTTATATACTGGCAATCTCAAAACTAGGCTCCTTCAAGATTCCTAGGAAGTCTCCCAAGCTCGGGTTGGGTTCCACTATTC TAGTTTCTTTGTGTATGATGCCATGGGGTTGACTCAGAAACTTTGCTCAATATATGACAAGGCAGCATTTGGTGAGTGGTGATCTCCACG TTTATCTTCTCATTTATATCCCTAGGAAGACATACTGATTAGCTGAGCTTGTCAATGAAAGCCCGGGTTCACCATTGGATTATCTATAAC TCTCCTTTCTCTTTTTTTCTCTCAGTAGCATTGTAGGAGGAGAGAACACTTAATTCTGGTTGAATGTCAGCTTGGATAAACATAGAAACA AACTAGAAAGAACTGATGATGTTCTCCTAGGTGGAAAAGATGGAGATTCCAATACCAAATAGGTGTGAATCAGCAAATGTATGTTATACT GTCTCTCAAGGCCAGGTGTTCAATACATTGTGGGTAGTTAATTATAATCAAAGTAATAATATTAGAGTTACGACATGGATCCTAAGCTTT TTAGCCATTAAACATATAAGAAATTTGTAGCATAGTGAGTTTTTTTATAACATGATCATCCAGGTTAAAATAAGACACAATTGACCTCAC ATATCCTATCTGAGCTCCGATTTTGTCATCTGTAAAAATGGAGATAGTGGTACCTACCTTACAGAGTTATGAGGCTGAGATAAGAGGGAA AGTTACAAAGTAGTACCATGTACAAAGCCCGGAACTGTGCAAATAGGAGGTTGTAATACTGTTTGAAGCATTCCCATCTCAAAAAGCCAG TTCCTTGGCCTTTATAAATTTGAAGGAATAATGAAACTGATTTGTTTCAATTGTGAAAATTATTTCTCTCCTGCCCCTGTGCACTTCTGC CCTGTCTATATTAGATTTCAAGAGGTTTCCCTTTTGTCATCTTGGCCAGACAATGGAATGTCTATCCCGTTTGAATCTGGGTTTAAAAAA GCATGGGAGCTAGTGGCCAAGTGTCACATGTATGCCGCATCCCTAAATAGAAGTCTCCCCAGGGCGCTTCCTGACCTGCGCAATGCTGCC GAAGGCCTCCTTTCCCCGCTCCCCAGGCAGAGGAGCAAAGTCACAGGCTGAGGGGCCTGCCACGACTTGCCCACAAAACAGGTCTGGAGT TTGGAAGTTACATTTGCTGGTTGCCCAGAGATGAGTGCAGAATTCAGCTTGGAGGTCCTGGAAACTTCTAGTTTACTGATGTTTATGCTT TTGCTCATGCACCCACAGTTCCTGGGACACAGAATGCTCACCTGGGGGTTTGTACCCCAGCCAAGAAGGTGTCTTCACAGACTCCCCTCC TTTTAGCAACTTCATGCAGATGGAGCTTGGGTGGATGGATCCTGGCACAGTGTTCAGAACAGTGGCCCTGCCAGTGTGTGGGCGCCGCTT GTGCAGAGCCCCTGTGGGTTCTGGTCCTCAAGGGCAGGGGCGCTCACTGACAGCGGAACCCATAGTACCAGCCCATCTTTGGTGGGCTGT TTCCACCCCATTCATCCCTGCTCAGCTCTTCATAGGACAGCCTGTGCTGGCAGAAAATTGCCCCCACCAGTCAAGACGTAGGGCATCAAC ATGAGCCATCAGTAATGACAGGGCAGCTTTGCAGAGCGTAAGGTAGCACCTGATACCTTGGACCAAAACCGTATTTTTATGTATCTTTCA CATGTACAGCTCTTGTCTTTGACTCATCAAACTTTCTTTTTTTTTTTTTTTTGCTTATTTCAGTTTGAGTATGAATTAATGAAAACAATT GTTTCATAGGCACTTGTATTTCTTACAACTGAAGATGGATATTTGCGAAGGAAGGTTAACCTGCCCTCTTAACTCAGCAGTGGTTCTAGC GTCCTATGCCGTACAATCTCATTTTGGAGACTATAATTCTTCCATACATCATCCAGGCTATCTTTCCGATAGTCACTTTATACCCGATCA AAATGAGGACTTTTTAACAAAAGTCGAATCTCTGCATGAGCAGCACAGTGGGCTAAAACAATCAGAAGCAGAATCCTGCTATATCAACAT AGCGCGGACCCTCGACTTCTATGGAGTAGAACTGCACAGTGGTAGGGATCTGCACAATTTAGACCTAATGATTGGAATTGCTTCCGCGGG TGTTGCTGTGTACCGAAAATACATTTGCACAAGTTTCTATCCTTGGGTGAACATTCTCAAAATTTCTTTCAAAAGGAAAAAGTTCTTCAT ACATCAGCGACAGAAACAGGCTGAATCCAGGGAACATATTGTGGCCTTCAACATGCTGAATTACCGATCTTGCAAAAACTTGTGGAAATC CTGTGTTGAGCACCATACGTTCTTTCAGGCAAAGAAGCTACTACCTCAGGAAAAGAATGTTCTGTCTCAGTACTGGACTATGGGCTCTCG GAACACCAAAAAGCGAAGTCCTCGGCTCCGGCACGAAATCCGAAAGCCACGCCACTCTTCTGCAGATAACCTTGCAAATGAAATGACCTA CATCACGGAAACGGAAGATGTATTTTACACGTACAAGGGCTCTCTGGCCCCTCAAGACAGCGATTCTGAAGTTTCTCAGAACCGAAGCCC GCACCAAGAGAGTTTATCCGAGAACAATCCGGCACAAAGCTACCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTCAAATGCTCC AGGCTCCTGCTCACCTGACGGCGTTGATCAGCAGCTCTTAGATGACTTCCACAGGGTGACCAAAGGGGGCTCCACCGAGGACGCCAGCCA GTACTACTGTGACAAGAATGATAATGGTGACAGCTACTTAGTCTTGATCCGTATCACACCAGATGAAGATGGAAAATTTGGATTTAATCT TAAGGGAGGAGTGGATCAAAAGATGCCTCTTGTGGTATCAAGGATAAACCCAGAGTCACCTGCGGACACCTGCATTCCTAAGCTGAACGA AGGGGATCAAATCGTGTTAATCAATGGCCGGGACATCTCAGAACACACGCATGACCAAGTGGTGATGTTCATCAAAGCCAGCCGGGAGTC CCACTCACGGGAGCTGGCCCTGGTGATCAGGAGGAGAGCTGTCCGCTCATTTGCTGACTTCAAGTCTGAAGATGAACTGAACCAGCTTTT CCCCGAAGCCATTTTCCCCATGTGTCCGGAGGGTGGGGACACTTTGGAGGGATCCATGGCACAGCTAAAGAAGGGCCTCGAAAGCGGGAC GGTGCTGATCCAGTTTGAGCAACTCTACAGAAAAAAGCCAGGTTTGGCCATCACGTTTGCAAAGCTGCCTCAAAATTTGGACAAAAACCG ATATAAAGATGTGCTGCCTTATGACACCACCCGGGTATTATTGCAGGGAAATGAAGATTATATTAATGCAAGTTACGTGAACATGGAAAT TCCTGCTGCTAACCTTGTGAACAAGTACATCGCCACTCAGGGGCCCCTGCCGCATACCTGTGCACAGTTTTGGCAGGTTGTCTGGGATCA GAAGTTGTCACTCATTGTCATGTTGACGACTCTCACAGAACGAGGGCGGACCAAATGTCACCAGTACTGGCCAGATCCCCCCGACGTCAT GAACCACGGCGGCTTTCACATCCAGTGTCAGTCAGAGGACTGCACCATCGCCTATGTGTCCCGAGAAATGCTGGTCACAAACACCCAGAC CGGGGAAGAACACACAGTGACACATCTCCAGTACGTCGCATGGCCTGACCACGGTGTGCCCGATGACTCCTCCGACTTTCTGGAATTTGT AAACTATGTGAGGTCTCTGAGAGTGGACAGCGAGCCCGTCCTAGTTCACTGCAGTGCTGGAATAGGTCGAACCGGTGTGTTGGTCACTAT GGAAACAGCCATGTGCCTAACTGAGAGGAACCTGCCCATTTACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGT GCAGACATCAAAACATGCCAAAGGCCAGGATTTGTTTGATCAGATTGTGTACCACTTGGACCTTGTGGAAACAGATTACTTTGGCCTCCA GTTCCTCGACTCTGCCCAGGTTGCGCACTGGCTGGATCATGCCAAACCCATAAAAAAGCAGATGAAAATTGGACCTGCTTATGCTTTACA CTTTCGAGTTAAATACTATTCTTCAGAACCAAACAACCTTCGTGAGGAGTTTACAAGGTACCTGTTTGTTTTACAACTCAGGCATGACAT TCTTTCTGGAAAATTGAAATGCCCTTATGAAACAGCTGTGGAATTAGCTGCTCTCTGTCTACAAGCGGAGCTTGGGGAGTGCGAGCTTCC AGAACACACACCAGAGCTTGTGTCTGAGTTTCGGTTCATTCCAAATCAGACAGAAGCAATGGAATTTGATATCTTCCAGAGATGGAAAGA GTGCAGGGGAAAGAGCCCTGCCCAGGCGGAACTCTCCTATCTGAATAAAGCGAAGTGGCTGGAAATGTATGGGGTAGACATGCACGTTGT CAGGGGAAGAGATGGCTGTGAATATTCTCTTGGACTGACCCCGACAGGCATATTAATCTTTGAAGGAGCTAACAAAATAGGCTTATTCTT TTGGCCTAAAATTACCAAAATGGATTTTAAAAAGAGCAAATTGACACTCGTGGTGGTCGAGGATGATGATCAGGGACGTGAGCAAGAGCA CACGTTTGTGTTCCGGTTAGACAGTGCCAGGACCTGCAAACACCTTTGGAAGTGTGCAGTTGAGCACCACGCATTCTTCCGACTGCGGAC GCCAGGAAACAGCAAATCCAATAGATCCGACTTTATCAGGCTGGGCTCTCGCTTCAGATTCAGTGGGCGGACAGAATATCAAGCTACACA TGGCTCCAGGTTACGAAGAACCAGCACCTTTGAGAGGAAGCCTAGTAAACGTTATCCATCCCGGAGACATTCAACGTTCAAAGCAAGCAA CCCAGTGATAGCAGCCCAGCTCTGCTCTAAAACAAATCCAGAAGTCCATAATTACCAGCCTCAATATCATCCTAATATCCATCCCAGCCA GCCCCGGTGGCATCCTCACTCTCCAAATGTCAGCTACCCGCTCCCTTCCCCAGTGCTTAGCAGCTCGGACCGGTTGCCTTTTGGCATTGA GGAGAATGGGGGCACACCGTTCCTCACCGCAGCTTCAGGAAGGCATCACCACCAGCACCAGCATCAGCATCAGCACCAGCACCACTCAAA CTACAGCCTCTCACTGACCCTGGAGAACAAAGAGGGGCCTCTGAGGTCCCCAAACTCCAGCAGCAAGTCCCTTACAAAACTGAGTCCAGG AACACCTGCCTTGTTCAGTGAAGCCGCTGCCCATCTAAAGAAGCTGGAACTGGAAACTGTGAAGGCTGCTGGACCCTGGCCTCCTCTGCA CATCAACATAAACAAGGCTGAAGAAAAGAAAGTCTCGGAGAAAACTCTTCAGACTCCACTTTTGCCTTCCCCTGTTGCGGATCATGTGAA GTGTAACATTCTGAAAGCCCAGTTGGAAAATGCTTCCCGAGTGAACATCCAGGGTGGAAAGGAGGAATCACCGTTTGTAAATATCAATAA GAAATCCAGTCTTCAGGACGCTAGTGTAAGAAGTCCTATTCCTATTCGTGTGGAAACTGCCCAGCCAGCTGTGGAAAAGCCGGAAATCAA GCCTCCCCGAGTGAGGAAGTTAACAAGACAGTATAGTTTTGATGAAGACGACCTCCCTCCAGACCTGGCCGAGGCAGTGGGAGTGACCAC ATCTACAACCACAAACACCACAACGGCCGCCACACAAGTCTCCGTGCCGCTGCCGTCCCCCAAGGTCCAGAATGTCAGCTCGCCTCACAA GTCAGAAGGCAAAGGCCTGCTGTCCCCTGGGGCCAAGAGCCCCTCTGACCGAGGAGGTGCCTTTACCCTGGAGCCGGGTGATCTTCTGAT GGATTTCACAGAAGCCACTCCTCTGGCAGAGCCCGCCAGCAACCCCCACTGTGCCCACTCTCGCTGTTCTCCTCCACTCTCTCTCCCCAT GAAGGAAGAGACCACTGGAGTTTGCATGTACCCTCCAATCAAAACGAGGCTGATAAAAACATTCCCGGTTGATACAATGAACCCGTTTCC TGATACTTTCACCACAGGGCCACAGTTTACTGCAGACTTCAGAGACAGTAAATTACAGTGCTGTCCTGGCCCGACTTCCCCGCTGATCCC AGCAGCGACCCTGAGGCCTTTGACAGAGACCGTCTCCACAGTGCAGACCATTTACACCACCCGGAAACCTGTTTCTCTGGCAGCCAGTGC AGAGACACTCCGGCAGGAACTGGAGAGAGAGAAGATGATGAAAAGACTGTTGATGACCGAACTGTGAAATTCTCCCCTTGTCACCTGGAA GATGGCATGGTGCCTTCTGTCCGTCTTCTTTCTTCGGGCTTTGTGTGCTCACTCTAGCACAGCATACAAGTGTGTGCTCTGTTCGCCCAG GTCTCCATGGTTAGTTGAAGCCAATTTCTGGCTTGACTTTTATGGGAAAAGTTATTTTATGTCTCCTAAGCATTAGAGTTTTTCTATTAC TCTATGTAGTTGAGACAGGATTTGATAAGTCTAGGAAAAGAAAGATGGGAAAACGGGATTCCTTTTCAGAAGTACCTGTGTGTATCTGTT AATAACCACAGGGGTTAATATGATGTAGGATCTTTTACTATCAATTTCAACCATTTGATTTTGTATGATTGAAACTTGCACCGAGCTTTG ACTGTTTGTTAAAGAGTCATTTTTAATGAAAGAATAATTCTTTATTGCTGGTTTTTCATTTACACTGATAAATACACAGATCTTATAAAG TCTTTAACATTCATTTGTATTCAGATGTGAGTAGAAGAACTAAAAAAAGAAAGTTACATATCACTATGACTGAAGGTACTTCAGCTTAAT CTGAAATATAATTTAACTTGTGAACTCCTTGGATATGATATTATTTGGAATAAACAGAATTTATCATTGAACCCAAAGTAGGAAATGATA GCTTACATTGTCTAAAAATCCTTACAAGGTTAAGATGATTCAATATCAAGAAGATTCAGAAAATTATTTCTAAAGTTGATCGATTCATGT CGTATTGATAGAATCTTGACCAGAAGAAATTTTGCTCTTTTTATATAGTTTCAAGAAATGTGTTTTTAAATTTTTATTAATGCACTTGAA CAACTTTGCAGGAATAAAGCAACCCCCTAACCACAAAATATCCCTCTAAATTAGTTCCCTAGCTTTCTCAATGAATACACACATATTTTT ACATAGCTATGATCGTTGTGTACATTCTCCTTTGTTTTACTTCTCGGCCTAACACTTGTCTCCTCTTGTCAACACAGATTCTACTCTCAC CAATTTAAATGTCTTTATATCCATGTAACATGGGTAACCTCACTTCACCCCATTATTAGATATTTGAGTTATATCTAATTTTTCACTCTT ATAAATAGTGCTGCTATGAATGTCTGTAAAAAAAAAAAACTGCTCCTTCTTTTGGATTATTCCCTTAGGAATATCTCCAAAGAGGGATTA CAAGGTCAAAGAGCATGAAGTATTTTATAGCTCTTGTTTTATATTGCCAGATTGCTTTCTAGAAAGATCCAATCTTTGGGTTGGAAGGAC CTTAAAGGTCATCTAGTTTAGCCTCCCCACCCCCTCTGAATGCTTGAATCCCCTCGACAATTTATGATGCCACCAGCAATGTATAAGCAT TTCTGTTTACCAATAGCTCTGCCAGTATTGGGTTTTGCCATTTTTATTTATTTTTGCTAGTTTAATAGGTATGTATAGTTGTTCTTGAAG AGTTGTTTTATTTCATTAATTGCTAGCAAGGCTGAGCACTTTTCCATGTGATGATTTACTAGTTGTATTTCCTTGTGTGTAAAATGTTCA TTCATTTCTTATGACCACTTGTTAAGAGGAACTGATCTCATATATTTGTATCAGAACTGTATTTTTATGTTATATTGTATAGTTTGCTCT CCTGCCCCTCTCCTTAAAACTGAATGGTGCCAATAATTTGATACTAATGACTACAAAAAAAGGTAATGCCTCATTTACTAGTATTGTTGT AAAATGAGGAATGTATGTGAATATTCAGATAACCGAGGATTAACCCTTTAAGTGCTGAATCTTTAAAATTTTAATATATTTTTTTTTGAG GGAAATCTTTCTAAAATGTATTACGCACTTCCCTGCCTTAGTAAACAGAGTATACTGGAGAGTATTTAACCTTTTCTTGATGAGTCATGG TCATGATTATAAACATCAGCCCCTTTTATACCTTGGTACGGTGCAGTGATATCATTAAGAGCTATCAATATGTGTAGGGCTTGGCTTGGC CTTTTATAGGATATTATGCTGTTCTCACTGATGGTTTTTTACTGCTCTCTGCTCTGTCAGTGGAGCTATCCGGGGCAATTGTAGCGTTTG GGTCCTTTTACCCCTATGTCCCCCGGCTATACTTTTAAAACAGCTTTAGCTGTTCTTTATCTTGTGCACATGATACAAAATATGTTCCCG TACAATATGGGGCTGTCACTTCTTGCCAACCCAGCACCCTCTTCCTCTTCTAACCTGCTTTCTGAGGCTTCTGCTCTTCACCTCCTGCTC GCTGATGGAAACCTCCAGGGCAAAGCTGAAGGTTTCTTGGGGAAGCCAGGAAAGCCAGTATTTCCTATGTGTCAGATCTGCTTGGCTTCC AAGAAGGGATGCATGGGCTTTTTGGCCAGTGTTTCCAGGAGGCTCTGGGCTTCCTGCTTCTTCCCCGCTTCCCCCAGAGTTCACAGATGT TGAAGTTTCTGAAGGTTGACGTCACTGGAAGTCTGACCACAAACAAGTTGGCTGTTACTGTATTTGAAACCCAGTACCTTTGGCAGCTCA >In-frame_ENST00000446349_ENST00000374566_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(amino acids)=1522AA_start in transcript=2518_stop in transcript=7086 MFHRHLYFLQLKMDICEGRLTCPLNSAVVLASYAVQSHFGDYNSSIHHPGYLSDSHFIPDQNEDFLTKVESLHEQHSGLKQSEAESCYIN IARTLDFYGVELHSGRDLHNLDLMIGIASAGVAVYRKYICTSFYPWVNILKISFKRKKFFIHQRQKQAESREHIVAFNMLNYRSCKNLWK SCVEHHTFFQAKKLLPQEKNVLSQYWTMGSRNTKKRSPRLRHEIRKPRHSSADNLANEMTYITETEDVFYTYKGSLAPQDSDSEVSQNRS PHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCSPDGVDQQLLDDFHRVTKGGSTEDASQYYCDKNDNGDSYLVLIRITPDEDGKFGFN LKGGVDQKMPLVVSRINPESPADTCIPKLNEGDQIVLINGRDISEHTHDQVVMFIKASRESHSRELALVIRRRAVRSFADFKSEDELNQL FPEAIFPMCPEGGDTLEGSMAQLKKGLESGTVLIQFEQLYRKKPGLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQGNEDYINASYVNME IPAANLVNKYIATQGPLPHTCAQFWQVVWDQKLSLIVMLTTLTERGRTKCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQ TGEEHTVTHLQYVAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMRDQRAMM VQTSKHAKGQDLFDQIVYHLDLVETDYFGLQFLDSAQVAHWLDHAKPIKKQMKIGPAYALHFRVKYYSSEPNNLREEFTRYLFVLQLRHD ILSGKLKCPYETAVELAALCLQAELGECELPEHTPELVSEFRFIPNQTEAMEFDIFQRWKECRGKSPAQAELSYLNKAKWLEMYGVDMHV VRGRDGCEYSLGLTPTGILIFEGANKIGLFFWPKITKMDFKKSKLTLVVVEDDDQGREQEHTFVFRLDSARTCKHLWKCAVEHHAFFRLR TPGNSKSNRSDFIRLGSRFRFSGRTEYQATHGSRLRRTSTFERKPSKRYPSRRHSTFKASNPVIAAQLCSKTNPEVHNYQPQYHPNIHPS QPRWHPHSPNVSYPLPSPVLSSSDRLPFGIEENGGTPFLTAASGRHHHQHQHQHQHQHHSNYSLSLTLENKEGPLRSPNSSSKSLTKLSP GTPALFSEAAAHLKKLELETVKAAGPWPPLHININKAEEKKVSEKTLQTPLLPSPVADHVKCNILKAQLENASRVNIQGGKEESPFVNIN KKSSLQDASVRSPIPIRVETAQPAVEKPEIKPPRVRKLTRQYSFDEDDLPPDLAEAVGVTTSTTTNTTTAATQVSVPLPSPKVQNVSSPH KSEGKGLLSPGAKSPSDRGGAFTLEPGDLLMDFTEATPLAEPASNPHCAHSRCSPPLSLPMKEETTGVCMYPPIKTRLIKTFPVDTMNPF -------------------------------------------------------------- >In-frame_ENST00000446349_ENST00000374557_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(transcript)=7872nt_BP=4690nt GAAGGGTGGTATCCCGTTGTGGAGTAGAATGTAACTATGACCTTCTGGGATTTGGGCACCAGATTTATCTTACTGCAACAGGAGCCATGG TGGGAGCCACCCCCATAACTCTTATAGAGCTGGTGGGCCACCAGGACTGCCAGATATATATATATATTTTTTGAAACAGGGTCTTGCTAT GTTGCCCAGACTGGCCTCAAACTCCTGGACTCAAAGGATCCTCCCTCAGCCTCCTGAGTAGCTGGGATTATAGGCACATACCACCACGAC TAGCTGCCAGATCATCTTATCTTGGACCAGGCTTCTACCATTAATTCACATGCTTTAAAAAAATTAAAAATTAAAAAAATGAAAAATAAA AAAACTTAAAAGATTTTACCTATATTCCTGGAACATAGTTATCTTACCCCAGCTTTGTAGTTCCTGTTTAAGGAAATTCCCTCTGAAGGA AATTTTAGCTCTCAAGAGTCAAAGAAGATGTATAGAGGTGGTATCTGTTAGTTTTTGTTTGTTTGTTAAGGATCTAGGCAGAGAGGTCAT TACATTTTTCTGAAGTTGAGGTCACAGGTGGGGTACCCACAAGAGAGGTCATTACATTTCTGAAGTTAGGCATCCCAGGCATCTCTTCTA AAGAACTATCCTGTATTCTAATTGTTAAATAAATATCTTCTTCATTGTGAGCCTCCACAACTGCTGTTTCTGATAAATTTAGATCATTCT TTGCAGAATTTTATATACTGGCAATCTCAAAACTAGGCTCCTTCAAGATTCCTAGGAAGTCTCCCAAGCTCGGGTTGGGTTCCACTATTC TAGTTTCTTTGTGTATGATGCCATGGGGTTGACTCAGAAACTTTGCTCAATATATGACAAGGCAGCATTTGGTGAGTGGTGATCTCCACG TTTATCTTCTCATTTATATCCCTAGGAAGACATACTGATTAGCTGAGCTTGTCAATGAAAGCCCGGGTTCACCATTGGATTATCTATAAC TCTCCTTTCTCTTTTTTTCTCTCAGTAGCATTGTAGGAGGAGAGAACACTTAATTCTGGTTGAATGTCAGCTTGGATAAACATAGAAACA AACTAGAAAGAACTGATGATGTTCTCCTAGGTGGAAAAGATGGAGATTCCAATACCAAATAGGTGTGAATCAGCAAATGTATGTTATACT GTCTCTCAAGGCCAGGTGTTCAATACATTGTGGGTAGTTAATTATAATCAAAGTAATAATATTAGAGTTACGACATGGATCCTAAGCTTT TTAGCCATTAAACATATAAGAAATTTGTAGCATAGTGAGTTTTTTTATAACATGATCATCCAGGTTAAAATAAGACACAATTGACCTCAC ATATCCTATCTGAGCTCCGATTTTGTCATCTGTAAAAATGGAGATAGTGGTACCTACCTTACAGAGTTATGAGGCTGAGATAAGAGGGAA AGTTACAAAGTAGTACCATGTACAAAGCCCGGAACTGTGCAAATAGGAGGTTGTAATACTGTTTGAAGCATTCCCATCTCAAAAAGCCAG TTCCTTGGCCTTTATAAATTTGAAGGAATAATGAAACTGATTTGTTTCAATTGTGAAAATTATTTCTCTCCTGCCCCTGTGCACTTCTGC CCTGTCTATATTAGATTTCAAGAGGTTTCCCTTTTGTCATCTTGGCCAGACAATGGAATGTCTATCCCGTTTGAATCTGGGTTTAAAAAA GCATGGGAGCTAGTGGCCAAGTGTCACATGTATGCCGCATCCCTAAATAGAAGTCTCCCCAGGGCGCTTCCTGACCTGCGCAATGCTGCC GAAGGCCTCCTTTCCCCGCTCCCCAGGCAGAGGAGCAAAGTCACAGGCTGAGGGGCCTGCCACGACTTGCCCACAAAACAGGTCTGGAGT TTGGAAGTTACATTTGCTGGTTGCCCAGAGATGAGTGCAGAATTCAGCTTGGAGGTCCTGGAAACTTCTAGTTTACTGATGTTTATGCTT TTGCTCATGCACCCACAGTTCCTGGGACACAGAATGCTCACCTGGGGGTTTGTACCCCAGCCAAGAAGGTGTCTTCACAGACTCCCCTCC TTTTAGCAACTTCATGCAGATGGAGCTTGGGTGGATGGATCCTGGCACAGTGTTCAGAACAGTGGCCCTGCCAGTGTGTGGGCGCCGCTT GTGCAGAGCCCCTGTGGGTTCTGGTCCTCAAGGGCAGGGGCGCTCACTGACAGCGGAACCCATAGTACCAGCCCATCTTTGGTGGGCTGT TTCCACCCCATTCATCCCTGCTCAGCTCTTCATAGGACAGCCTGTGCTGGCAGAAAATTGCCCCCACCAGTCAAGACGTAGGGCATCAAC ATGAGCCATCAGTAATGACAGGGCAGCTTTGCAGAGCGTAAGGTAGCACCTGATACCTTGGACCAAAACCGTATTTTTATGTATCTTTCA CATGTACAGCTCTTGTCTTTGACTCATCAAACTTTCTTTTTTTTTTTTTTTTGCTTATTTCAGTTTGAGTATGAATTAATGAAAACAATT GTTTCATAGGCACTTGTATTTCTTACAACTGAAGATGGATATTTGCGAAGGAAGGTTAACCTGCCCTCTTAACTCAGCAGTGGTTCTAGC GTCCTATGCCGTACAATCTCATTTTGGAGACTATAATTCTTCCATACATCATCCAGGCTATCTTTCCGATAGTCACTTTATACCCGATCA AAATGAGGACTTTTTAACAAAAGTCGAATCTCTGCATGAGCAGCACAGTGGGCTAAAACAATCAGAAGCAGAATCCTGCTATATCAACAT AGCGCGGACCCTCGACTTCTATGGAGTAGAACTGCACAGTGGTAGGGATCTGCACAATTTAGACCTAATGATTGGAATTGCTTCCGCGGG TGTTGCTGTGTACCGAAAATACATTTGCACAAGTTTCTATCCTTGGGTGAACATTCTCAAAATTTCTTTCAAAAGGAAAAAGTTCTTCAT ACATCAGCGACAGAAACAGGCTGAATCCAGGGAACATATTGTGGCCTTCAACATGCTGAATTACCGATCTTGCAAAAACTTGTGGAAATC CTGTGTTGAGCACCATACGTTCTTTCAGGCAAAGAAGCTACTACCTCAGGAAAAGAATGTTCTGTCTCAGTACTGGACTATGGGCTCTCG GAACACCAAAAAGCGAAGTCCTCGGCTCCGGCACGAAATCCGAAAGCCACGCCACTCTTCTGCAGATAACCTTGCAAATGAAATGACCTA CATCACGGAAACGGAAGATGTATTTTACACGTACAAGGGCTCTCTGGCCCCTCAAGACAGCGATTCTGAAGTTTCTCAGAACCGAAGCCC GCACCAAGAGAGTTTATCCGAGAACAATCCGGCACAAAGCTACCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTCAAATGCTCC AGGCTCCTGCTCACCTGACGGCGTTGATCAGCAGCTCTTAGATGACTTCCACAGGGTGACCAAAGGGGGCTCCACCGAGGACGCCAGCCA GTACTACTGTGACAAGAATGATAATGGTGACAGCTACTTAGTCTTGATCCGTATCACACCAGATGAAGATGGAAAATTTGGATTTAATCT TAAGGGAGGAGTGGATCAAAAGATGCCTCTTGTGGTATCAAGGATAAACCCAGAGTCACCTGCGGACACCTGCATTCCTAAGCTGAACGA AGGGGATCAAATCGTGTTAATCAATGGCCGGGACATCTCAGAACACACGCATGACCAAGTGGTGATGTTCATCAAAGCCAGCCGGGAGTC CCACTCACGGGAGCTGGCCCTGGTGATCAGGAGGAGAGCTGTCCGCTCATTTGCTGACTTCAAGTCTGAAGATGAACTGAACCAGCTTTT CCCCGAAGCCATTTTCCCCATGTGTCCGGAGGGTGGGGACACTTTGGAGGGATCCATGGCACAGCTAAAGAAGGGCCTCGAAAGCGGGAC GGTGCTGATCCAGTTTGAGCAACTCTACAGAAAAAAGCCAGGTTTGGCCATCACGTTTGCAAAGCTGCCTCAAAATTTGGACAAAAACCG ATATAAAGATGTGCTGCCTTATGACACCACCCGGGTATTATTGCAGGGAAATGAAGATTATATTAATGCAAGTTACGTGAACATGGAAAT TCCTGCTGCTAACCTTGTGAACAAGTACATCGCCACTCAGGGGCCCCTGCCGCATACCTGTGCACAGTTTTGGCAGGTTGTCTGGGATCA GAAGTTGTCACTCATTGTCATGTTGACGACTCTCACAGAACGAGGGCGGACCAAATGTCACCAGTACTGGCCAGATCCCCCCGACGTCAT GAACCACGGCGGCTTTCACATCCAGTGTCAGTCAGAGGACTGCACCATCGCCTATGTGTCCCGAGAAATGCTGGTCACAAACACCCAGAC CGGGGAAGAACACACAGTGACACATCTCCAGTACGTCGCATGGCCTGACCACGGTGTGCCCGATGACTCCTCCGACTTTCTGGAATTTGT AAACTATGTGAGGTCTCTGAGAGTGGACAGCGAGCCCGTCCTAGTTCACTGCAGTGCTGGAATAGGTCGAACCGGTGTGTTGGTCACTAT GGAAACAGCCATGTGCCTAACTGAGAGGAACCTGCCCATTTACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGT GCAGACATCAAAACATGCCAAAGGCCAGGATTTGTTTGATCAGATTGTGTACCACTTGGACCTTGTGGAAACAGATTACTTTGGCCTCCA GTTCCTCGACTCTGCCCAGGTTGCGCACTGGCTGGATCATGCCAAACCCATAAAAAAGCAGATGAAAATTGGACCTGCTTATGCTTTACA CTTTCGAGTTAAATACTATTCTTCAGAACCAAACAACCTTCGTGAGGAGTTTACAAGGTACCTGTTTGTTTTACAACTCAGGCATGACAT TCTTTCTGGAAAATTGAAATGCCCTTATGAAACAGCTGTGGAATTAGCTGCTCTCTGTCTACAAGCGGAGCTTGGGGAGTGCGAGCTTCC AGAACACACACCAGAGCTTGTGTCTGAGTTTCGGTTCATTCCAAATCAGACAGAAGCAATGGAATTTGATATCTTCCAGAGATGGAAAGA GTGCAGGGGAAAGAGCCCTGCCCAGGCGGAACTCTCCTATCTGAATAAAGCGAAGTGGCTGGAAATGTATGGGGTAGACATGCACGTTGT CAGGGGAAGAGATGGCTGTGAATATTCTCTTGGACTGACCCCGACAGGCATATTAATCTTTGAAGGAGCTAACAAAATAGGCTTATTCTT TTGGCCTAAAATTACCAAAATGGATTTTAAAAAGAGCAAATTGACACTCGTGGTGGTCGAGGATGATGATCAGGGACGTGAGCAAGAGCA CACGTTTGTGTTCCGGTTAGACAGTGCCAGGACCTGCAAACACCTTTGGAAGTGTGCAGTTGAGCACCACGCATTCTTCCGACTGCGGAC GCCAGGAAACAGCAAATCCAATAGATCCGACTTTATCAGGCTGGGCTCTCGCTTCAGATTCAGTGGGCGGACAGAATATCAAGCTACACA TGGCTCCAGGTTACGAAGAACCAGCACCTTTGAGAGGAAGCCTAGTAAACGTTATCCATCCCGGAGACATTCAACGTTCAAAGCAAGCAA CCCAGTGATAGCAGCCCAGCTCTGCTCTAAAACAAATCCAGAAGTCCATAATTACCAGCCTCAATATCATCCTAATATCCATCCCAGCCA GCCCCGGTGGCATCCTCACTCTCCAAATGTCAGGCCATCCTTTCAGGATGACAGGTCGCATTGGAAAGCATCGGCCAGTGGAGATGACAG CCATTTTGATTATGTCCACGACCAGAACCAGAAGAACTTAGGAGGGATGCAAAGTATGATGTATCGAGATAAACTCATGACTGCACTTTG AGAGACTGAAGCATCTCTCTTCCATTCACCTTCATAGTTTCATTGCATTCCATGAAAAGTGTCTTGGCCTCAGATGGATGGATGTGTTTG GACGAGTGTCTTTAAGGAGTAGTCCTGAAAGGTGTTTTTGGTGTCCATGTAAATATTTGAAGATAAAACCACTATAGCTTGTCATAATTT ACTGTTGACTGCATTCTCATTAAAATGAAGGTAAAGGCTCAGGAATCATATTGATGTTCTGATTTTAAAATTGGAGTCAAAGTCTATGTT TATCATTTTACTATGTTCCTGATGTTCTTTGTTATTTAATTAATGGGAGCAAATAAAACCAGAAGAGCTTGGGAAGATTGCTCAGCATAT ATTCCTGTCGTAGAAGTTGAGATTGCTAGGGTCCAGTTTCCCTAGTGTGGCCTGGACGAGTCATTTCCCCTTCATTGACCTCATTTTCCC CATCTGAAAAGAGAGGGTTGGACTAAGTGATCTCCAAGGTCCTTTCCAACTCTAAAATTCTGCAATTTGTTAACATTTCATTTTGTTTAG GTTGAGGACATACATTCAAACTAATTTTATCACAAGGAAAACTGCAATACCCACTTCCTTGACAGAGTTACTCCTTTCAGAAGCTAAATA AAGTATATAACTTATTAGATGTTATATAGATACAGGGGGACTTTGAATTTCACATCTTAAAGCAGTTGAGCTACTTTGAATTTAAGCAGT CGTACTAATCTTAAATTGCATAGCATTTGTTTTGATCGAATTTGCTGCTCAAGTATGGGAATAATTTTTAATGTCTTAATGATTGGTGCT GCTAACTTGCGTGATTTCAGAAGACATAATTGTGAATACACACTGTCAGAATTGGGGGATTGGTTTTTACCCTAGACTTCACTCTTAAAA AGCAACGTGCAATCAAGATCATTTATGGCTCAAATGAAAGCATATAAGGTTTTCTTGAAGTTGTGCCAAAGCATTCTGTAGAGTAGGATG AGATGGTTGTTGCCCTAGTCTGTTGGTAGAACCAGAAATCAATATGTTGTCTTTTAGGTTAAAGCTTGTACCAAAATATTTATTTCCCCC ATTTCAAGCCCTGAGTCAAACATTTTTTTCTCTTAATAATAGACCTGAAATGTTTTATTAGTATTTCTGTGAAATCAGTTGATTCTTGTG CCATTTTTGTATATGTAATTGTAATTTTGCCCATGTTAGGCCCTCTAAAAAATGTTTGACATCCTTTGAGATATTTTATTACTAAAATCT GATCTTTTTTGGCTACTGCAAAAATCTATTCAGCAAGAAGGTATCAGCTGCATACCTTGCACAGTGGAGCTGACTACCTATAAACTCTCC CTAAGGCATTTGTTTACAGGTGTATTCCATTTTAGCAGACGTTCTGATGCTCAGTGTATGTGCTGCATACAAATAAATGTGTTCTGAATC TTTTCATCTTATTGATAGCATTTTTACAAATGTGTTTCCAAGGAATAAAGATTATTCTTGCTTTTTTTTTGACTCCATCTTCATTTTTTT TAAATTGATTCTTGTTGCTATGCAGAAGTCTCATTTGTGAATGACCTTGGTAACAGAACAGTTGGCTTTTGGAAGTCTGAAGGTGAGCAT TCAGTTAGGTGGGTGGAGCAAGATCATCCTAGAATGAGGCTGCTCTTGGCAAGAGTGGATCTTATAGGCACAGCAGCTGATGCCTTTCTT CATCTGGGGCAACTCTGGTGAAGGTTGTCCTGCCTGTCACAGGTGCTGAGTAGAGAGAAGTGGTGGCAGTGGGATTTCCTCAGTAATAGT CCTGTAAAGGTACGTGTTTGTCCTGGCTACTTGTGCTCTTCCTGGCAGGAAGGCATCCAAACCCTTATCTGTGGGCTCCTGGAAATTGTG >In-frame_ENST00000446349_ENST00000374557_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(amino acids)=1140AA_start in transcript=2518_stop in transcript=5940 MFHRHLYFLQLKMDICEGRLTCPLNSAVVLASYAVQSHFGDYNSSIHHPGYLSDSHFIPDQNEDFLTKVESLHEQHSGLKQSEAESCYIN IARTLDFYGVELHSGRDLHNLDLMIGIASAGVAVYRKYICTSFYPWVNILKISFKRKKFFIHQRQKQAESREHIVAFNMLNYRSCKNLWK SCVEHHTFFQAKKLLPQEKNVLSQYWTMGSRNTKKRSPRLRHEIRKPRHSSADNLANEMTYITETEDVFYTYKGSLAPQDSDSEVSQNRS PHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCSPDGVDQQLLDDFHRVTKGGSTEDASQYYCDKNDNGDSYLVLIRITPDEDGKFGFN LKGGVDQKMPLVVSRINPESPADTCIPKLNEGDQIVLINGRDISEHTHDQVVMFIKASRESHSRELALVIRRRAVRSFADFKSEDELNQL FPEAIFPMCPEGGDTLEGSMAQLKKGLESGTVLIQFEQLYRKKPGLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQGNEDYINASYVNME IPAANLVNKYIATQGPLPHTCAQFWQVVWDQKLSLIVMLTTLTERGRTKCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQ TGEEHTVTHLQYVAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMRDQRAMM VQTSKHAKGQDLFDQIVYHLDLVETDYFGLQFLDSAQVAHWLDHAKPIKKQMKIGPAYALHFRVKYYSSEPNNLREEFTRYLFVLQLRHD ILSGKLKCPYETAVELAALCLQAELGECELPEHTPELVSEFRFIPNQTEAMEFDIFQRWKECRGKSPAQAELSYLNKAKWLEMYGVDMHV VRGRDGCEYSLGLTPTGILIFEGANKIGLFFWPKITKMDFKKSKLTLVVVEDDDQGREQEHTFVFRLDSARTCKHLWKCAVEHHAFFRLR TPGNSKSNRSDFIRLGSRFRFSGRTEYQATHGSRLRRTSTFERKPSKRYPSRRHSTFKASNPVIAAQLCSKTNPEVHNYQPQYHPNIHPS -------------------------------------------------------------- >In-frame_ENST00000374541_ENST00000374566_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(transcript)=7745nt_BP=2769nt GACGGCGGCCAGGTCGCGCCGCGAGCGAGCTTCCGCGCCGCCCGCACGCGCGACCTACCTGGGCGCTCCGCGCCCCCGGATGCTGCAGGT TATTCAGCGATAGTTATGACCTCCCGGTTACGTGCGTTGGGTGGAAGAATTAATAATATACGCACCTCGGAGTTACCCAAAGAGAAAACT CGATCAGAAGTCATTTGCAGCATCCACTTTTTAGATGGCGTGGTACAGACCTTTAAAGTTACTAAACAAGACACTGGCCAGGTTCTTCTG GATATGGTGCACAACCACCTGGGTGTGACTGAAAAGGAATATTTTGGTTTACAGCATGATGACGACTCCGTGGACTCTCCTAGATGGCTG GAAGCAAGCAAAGCCATCAGGAAGCAGTTAAAAGGAGGTTTCCCCTGTACCCTGCATTTTCGAGTAAGATTTTTTATACCTGATCCCAAC ACACTGCAGCAAGAACAAACCAGGCACTTGTATTTCTTACAACTGAAGATGGATATTTGCGAAGGAAGGTTAACCTGCCCTCTTAACTCA GCAGTGGTTCTAGCGTCCTATGCCGTACAATCTCATTTTGGAGACTATAATTCTTCCATACATCATCCAGGCTATCTTTCCGATAGTCAC TTTATACCCGATCAAAATGAGGACTTTTTAACAAAAGTCGAATCTCTGCATGAGCAGCACAGTGGGCTAAAACAATCAGAAGCAGAATCC TGCTATATCAACATAGCGCGGACCCTCGACTTCTATGGAGTAGAACTGCACAGTGGTAGGGATCTGCACAATTTAGACCTAATGATTGGA ATTGCTTCCGCGGGTGTTGCTGTGTACCGAAAATACATTTGCACAAGTTTCTATCCTTGGGTGAACATTCTCAAAATTTCTTTCAAAAGG AAAAAGTTCTTCATACATCAGCGACAGAAACAGGCTGAATCCAGGGAACATATTGTGGCCTTCAACATGCTGAATTACCGATCTTGCAAA AACTTGTGGAAATCCTGTGTTGAGCACCATACGTTCTTTCAGGCAAAGAAGCTACTACCTCAGGAAAAGAATGTTCTGTCTCAGTACTGG ACTATGGGCTCTCGGAACACCAAAAAGTCGGTAAATAACCAATATTGCAAAAAGGTGATTGGCGGGATGGTGTGGAACCCAGCCATGCGG AGATCCTTATCAGTGGAGCACTTAGAAACCAAGAGTCTGCCTTCTCGTTCCCCTCCCATTACTCCCAACTGGCGAAGTCCTCGGCTCCGG CACGAAATCCGAAAGCCACGCCACTCTTCTGCAGATAACCTTGCAAATGAAATGACCTACATCACGGAAACGGAAGATGTATTTTACACG TACAAGGGCTCTCTGGCCCCTCAAGACAGCGATTCTGAAGTTTCTCAGAACCGAAGCCCGCACCAAGAGAGTTTATCCGAGAACAATCCG GCACAAAGCTACCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCCTGCTCACCTGACGGCGTTGATCAG CAGCTCTTAGATGACTTCCACAGGGTGACCAAAGGGGGCTCCACCGAGGACGCCAGCCAGTACTACTGTGACAAGAATGATAATGGTGAC AGCTACTTAGTCTTGATCCGTATCACACCAGATGAAGATGGAAAATTTGGATTTAATCTTAAGGGAGGAGTGGATCAAAAGATGCCTCTT GTGGTATCAAGGATAAACCCAGAGTCACCTGCGGACACCTGCATTCCTAAGCTGAACGAAGGGGATCAAATCGTGTTAATCAATGGCCGG GACATCTCAGAACACACGCATGACCAAGTGGTGATGTTCATCAAAGCCAGCCGGGAGTCCCACTCACGGGAGCTGGCCCTGGTGATCAGG AGGAGAGCTGTCCGCTCATTTGCTGACTTCAAGTCTGAAGATGAACTGAACCAGCTTTTCCCCGAAGCCATTTTCCCCATGTGTCCGGAG GGTGGGGACACTTTGGAGGGATCCATGGCACAGCTAAAGAAGGGCCTCGAAAGCGGGACGGTGCTGATCCAGTTTGAGCAACTCTACAGA AAAAAGCCAGGTTTGGCCATCACGTTTGCAAAGCTGCCTCAAAATTTGGACAAAAACCGATATAAAGATGTGCTGCCTTATGACACCACC CGGGTATTATTGCAGGGAAATGAAGATTATATTAATGCAAGTTACGTGAACATGGAAATTCCTGCTGCTAACCTTGTGAACAAGTACATC GCCACTCAGGGGCCCCTGCCGCATACCTGTGCACAGTTTTGGCAGGTTGTCTGGGATCAGAAGTTGTCACTCATTGTCATGTTGACGACT CTCACAGAACGAGGGCGGACCAAATGTCACCAGTACTGGCCAGATCCCCCCGACGTCATGAACCACGGCGGCTTTCACATCCAGTGTCAG TCAGAGGACTGCACCATCGCCTATGTGTCCCGAGAAATGCTGGTCACAAACACCCAGACCGGGGAAGAACACACAGTGACACATCTCCAG TACGTCGCATGGCCTGACCACGGTGTGCCCGATGACTCCTCCGACTTTCTGGAATTTGTAAACTATGTGAGGTCTCTGAGAGTGGACAGC GAGCCCGTCCTAGTTCACTGCAGTGCTGGAATAGGTCGAACCGGTGTGTTGGTCACTATGGAAACAGCCATGTGCCTAACTGAGAGGAAC CTGCCCATTTACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGTGCAGACATCAAAACATGCCAAAGGCCAGGAT TTGTTTGATCAGATTGTGTACCACTTGGACCTTGTGGAAACAGATTACTTTGGCCTCCAGTTCCTCGACTCTGCCCAGGTTGCGCACTGG CTGGATCATGCCAAACCCATAAAAAAGCAGATGAAAATTGGACCTGCTTATGCTTTACACTTTCGAGTTAAATACTATTCTTCAGAACCA AACAACCTTCGTGAGGAGTTTACAAGGTACCTGTTTGTTTTACAACTCAGGCATGACATTCTTTCTGGAAAATTGAAATGCCCTTATGAA ACAGCTGTGGAATTAGCTGCTCTCTGTCTACAAGCGGAGCTTGGGGAGTGCGAGCTTCCAGAACACACACCAGAGCTTGTGTCTGAGTTT CGGTTCATTCCAAATCAGACAGAAGCAATGGAATTTGATATCTTCCAGAGATGGAAAGAGTGCAGGGGAAAGAGCCCTGCCCAGGCGGAA CTCTCCTATCTGAATAAAGCGAAGTGGCTGGAAATGTATGGGGTAGACATGCACGTTGTCAGGGGAAGAGATGGCTGTGAATATTCTCTT GGACTGACCCCGACAGGCATATTAATCTTTGAAGGAGCTAACAAAATAGGCTTATTCTTTTGGCCTAAAATTACCAAAATGGATTTTAAA AAGAGCAAATTGACACTCGTGGTGGTCGAGGATGATGATCAGGGACGTGAGCAAGAGCACACGTTTGTGTTCCGGTTAGACAGTGCCAGG ACCTGCAAACACCTTTGGAAGTGTGCAGTTGAGCACCACGCATTCTTCCGACTGCGGACGCCAGGAAACAGCAAATCCAATAGATCCGAC TTTATCAGGCTGGGCTCTCGCTTCAGATTCAGTGGGCGGACAGAATATCAAGCTACACATGGCTCCAGGTTACGAAGAACCAGCACCTTT GAGAGGAAGCCTAGTAAACGTTATCCATCCCGGAGACATTCAACGTTCAAAGCAAGCAACCCAGTGATAGCAGCCCAGCTCTGCTCTAAA ACAAATCCAGAAGTCCATAATTACCAGCCTCAATATCATCCTAATATCCATCCCAGCCAGCCCCGGTGGCATCCTCACTCTCCAAATGTC AGCTACCCGCTCCCTTCCCCAGTGCTTAGCAGCTCGGACCGGTTGCCTTTTGGCATTGAGGAGAATGGGGGCACACCGTTCCTCACCGCA GCTTCAGGAAGGCATCACCACCAGCACCAGCATCAGCATCAGCACCAGCACCACTCAAACTACAGCCTCTCACTGACCCTGGAGAACAAA GAGGGGCCTCTGAGGTCCCCAAACTCCAGCAGCAAGTCCCTTACAAAACTGAGTCCAGGAACACCTGCCTTGTTCAGTGAAGCCGCTGCC CATCTAAAGAAGCTGGAACTGGAAACTGTGAAGGCTGCTGGACCCTGGCCTCCTCTGCACATCAACATAAACAAGGCTGAAGAAAAGAAA GTCTCGGAGAAAACTCTTCAGACTCCACTTTTGCCTTCCCCTGTTGCGGATCATGTGAAGTGTAACATTCTGAAAGCCCAGTTGGAAAAT GCTTCCCGAGTGAACATCCAGGGTGGAAAGGAGGAATCACCGTTTGTAAATATCAATAAGAAATCCAGTCTTCAGGACGCTAGTGTAAGA AGTCCTATTCCTATTCGTGTGGAAACTGCCCAGCCAGCTGTGGAAAAGCCGGAAATCAAGCCTCCCCGAGTGAGGAAGTTAACAAGACAG TATAGTTTTGATGAAGACGACCTCCCTCCAGACCTGGCCGAGGCAGTGGGAGTGACCACATCTACAACCACAAACACCACAACGGCCGCC ACACAAGTCTCCGTGCCGCTGCCGTCCCCCAAGGTCCAGAATGTCAGCTCGCCTCACAAGTCAGAAGGCAAAGGCCTGCTGTCCCCTGGG GCCAAGAGCCCCTCTGACCGAGGAGGTGCCTTTACCCTGGAGCCGGGTGATCTTCTGATGGATTTCACAGAAGCCACTCCTCTGGCAGAG CCCGCCAGCAACCCCCACTGTGCCCACTCTCGCTGTTCTCCTCCACTCTCTCTCCCCATGAAGGAAGAGACCACTGGAGTTTGCATGTAC CCTCCAATCAAAACGAGGCTGATAAAAACATTCCCGGTTGATACAATGAACCCGTTTCCTGATACTTTCACCACAGGGCCACAGTTTACT GCAGACTTCAGAGACAGTAAATTACAGTGCTGTCCTGGCCCGACTTCCCCGCTGATCCCAGCAGCGACCCTGAGGCCTTTGACAGAGACC GTCTCCACAGTGCAGACCATTTACACCACCCGGAAACCTGTTTCTCTGGCAGCCAGTGCAGAGACACTCCGGCAGGAACTGGAGAGAGAG AAGATGATGAAAAGACTGTTGATGACCGAACTGTGAAATTCTCCCCTTGTCACCTGGAAGATGGCATGGTGCCTTCTGTCCGTCTTCTTT CTTCGGGCTTTGTGTGCTCACTCTAGCACAGCATACAAGTGTGTGCTCTGTTCGCCCAGGTCTCCATGGTTAGTTGAAGCCAATTTCTGG CTTGACTTTTATGGGAAAAGTTATTTTATGTCTCCTAAGCATTAGAGTTTTTCTATTACTCTATGTAGTTGAGACAGGATTTGATAAGTC TAGGAAAAGAAAGATGGGAAAACGGGATTCCTTTTCAGAAGTACCTGTGTGTATCTGTTAATAACCACAGGGGTTAATATGATGTAGGAT CTTTTACTATCAATTTCAACCATTTGATTTTGTATGATTGAAACTTGCACCGAGCTTTGACTGTTTGTTAAAGAGTCATTTTTAATGAAA GAATAATTCTTTATTGCTGGTTTTTCATTTACACTGATAAATACACAGATCTTATAAAGTCTTTAACATTCATTTGTATTCAGATGTGAG TAGAAGAACTAAAAAAAGAAAGTTACATATCACTATGACTGAAGGTACTTCAGCTTAATCTGAAATATAATTTAACTTGTGAACTCCTTG GATATGATATTATTTGGAATAAACAGAATTTATCATTGAACCCAAAGTAGGAAATGATAGCTTACATTGTCTAAAAATCCTTACAAGGTT AAGATGATTCAATATCAAGAAGATTCAGAAAATTATTTCTAAAGTTGATCGATTCATGTCGTATTGATAGAATCTTGACCAGAAGAAATT TTGCTCTTTTTATATAGTTTCAAGAAATGTGTTTTTAAATTTTTATTAATGCACTTGAACAACTTTGCAGGAATAAAGCAACCCCCTAAC CACAAAATATCCCTCTAAATTAGTTCCCTAGCTTTCTCAATGAATACACACATATTTTTACATAGCTATGATCGTTGTGTACATTCTCCT TTGTTTTACTTCTCGGCCTAACACTTGTCTCCTCTTGTCAACACAGATTCTACTCTCACCAATTTAAATGTCTTTATATCCATGTAACAT GGGTAACCTCACTTCACCCCATTATTAGATATTTGAGTTATATCTAATTTTTCACTCTTATAAATAGTGCTGCTATGAATGTCTGTAAAA AAAAAAAACTGCTCCTTCTTTTGGATTATTCCCTTAGGAATATCTCCAAAGAGGGATTACAAGGTCAAAGAGCATGAAGTATTTTATAGC TCTTGTTTTATATTGCCAGATTGCTTTCTAGAAAGATCCAATCTTTGGGTTGGAAGGACCTTAAAGGTCATCTAGTTTAGCCTCCCCACC CCCTCTGAATGCTTGAATCCCCTCGACAATTTATGATGCCACCAGCAATGTATAAGCATTTCTGTTTACCAATAGCTCTGCCAGTATTGG GTTTTGCCATTTTTATTTATTTTTGCTAGTTTAATAGGTATGTATAGTTGTTCTTGAAGAGTTGTTTTATTTCATTAATTGCTAGCAAGG CTGAGCACTTTTCCATGTGATGATTTACTAGTTGTATTTCCTTGTGTGTAAAATGTTCATTCATTTCTTATGACCACTTGTTAAGAGGAA CTGATCTCATATATTTGTATCAGAACTGTATTTTTATGTTATATTGTATAGTTTGCTCTCCTGCCCCTCTCCTTAAAACTGAATGGTGCC AATAATTTGATACTAATGACTACAAAAAAAGGTAATGCCTCATTTACTAGTATTGTTGTAAAATGAGGAATGTATGTGAATATTCAGATA ACCGAGGATTAACCCTTTAAGTGCTGAATCTTTAAAATTTTAATATATTTTTTTTTGAGGGAAATCTTTCTAAAATGTATTACGCACTTC CCTGCCTTAGTAAACAGAGTATACTGGAGAGTATTTAACCTTTTCTTGATGAGTCATGGTCATGATTATAAACATCAGCCCCTTTTATAC CTTGGTACGGTGCAGTGATATCATTAAGAGCTATCAATATGTGTAGGGCTTGGCTTGGCCTTTTATAGGATATTATGCTGTTCTCACTGA TGGTTTTTTACTGCTCTCTGCTCTGTCAGTGGAGCTATCCGGGGCAATTGTAGCGTTTGGGTCCTTTTACCCCTATGTCCCCCGGCTATA CTTTTAAAACAGCTTTAGCTGTTCTTTATCTTGTGCACATGATACAAAATATGTTCCCGTACAATATGGGGCTGTCACTTCTTGCCAACC CAGCACCCTCTTCCTCTTCTAACCTGCTTTCTGAGGCTTCTGCTCTTCACCTCCTGCTCGCTGATGGAAACCTCCAGGGCAAAGCTGAAG GTTTCTTGGGGAAGCCAGGAAAGCCAGTATTTCCTATGTGTCAGATCTGCTTGGCTTCCAAGAAGGGATGCATGGGCTTTTTGGCCAGTG TTTCCAGGAGGCTCTGGGCTTCCTGCTTCTTCCCCGCTTCCCCCAGAGTTCACAGATGTTGAAGTTTCTGAAGGTTGACGTCACTGGAAG TCTGACCACAAACAAGTTGGCTGTTACTGTATTTGAAACCCAGTACCTTTGGCAGCTCACCTCTAACCAGTAAAATAAGAGGATTCCATG >In-frame_ENST00000374541_ENST00000374566_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(amino acids)=1686AA_start in transcript=105_stop in transcript=5165 MTSRLRALGGRINNIRTSELPKEKTRSEVICSIHFLDGVVQTFKVTKQDTGQVLLDMVHNHLGVTEKEYFGLQHDDDSVDSPRWLEASKA IRKQLKGGFPCTLHFRVRFFIPDPNTLQQEQTRHLYFLQLKMDICEGRLTCPLNSAVVLASYAVQSHFGDYNSSIHHPGYLSDSHFIPDQ NEDFLTKVESLHEQHSGLKQSEAESCYINIARTLDFYGVELHSGRDLHNLDLMIGIASAGVAVYRKYICTSFYPWVNILKISFKRKKFFI HQRQKQAESREHIVAFNMLNYRSCKNLWKSCVEHHTFFQAKKLLPQEKNVLSQYWTMGSRNTKKSVNNQYCKKVIGGMVWNPAMRRSLSV EHLETKSLPSRSPPITPNWRSPRLRHEIRKPRHSSADNLANEMTYITETEDVFYTYKGSLAPQDSDSEVSQNRSPHQESLSENNPAQSYL TQKSSSSVSPSSNAPGSCSPDGVDQQLLDDFHRVTKGGSTEDASQYYCDKNDNGDSYLVLIRITPDEDGKFGFNLKGGVDQKMPLVVSRI NPESPADTCIPKLNEGDQIVLINGRDISEHTHDQVVMFIKASRESHSRELALVIRRRAVRSFADFKSEDELNQLFPEAIFPMCPEGGDTL EGSMAQLKKGLESGTVLIQFEQLYRKKPGLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQGNEDYINASYVNMEIPAANLVNKYIATQGP LPHTCAQFWQVVWDQKLSLIVMLTTLTERGRTKCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWP DHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMRDQRAMMVQTSKHAKGQDLFDQI VYHLDLVETDYFGLQFLDSAQVAHWLDHAKPIKKQMKIGPAYALHFRVKYYSSEPNNLREEFTRYLFVLQLRHDILSGKLKCPYETAVEL AALCLQAELGECELPEHTPELVSEFRFIPNQTEAMEFDIFQRWKECRGKSPAQAELSYLNKAKWLEMYGVDMHVVRGRDGCEYSLGLTPT GILIFEGANKIGLFFWPKITKMDFKKSKLTLVVVEDDDQGREQEHTFVFRLDSARTCKHLWKCAVEHHAFFRLRTPGNSKSNRSDFIRLG SRFRFSGRTEYQATHGSRLRRTSTFERKPSKRYPSRRHSTFKASNPVIAAQLCSKTNPEVHNYQPQYHPNIHPSQPRWHPHSPNVSYPLP SPVLSSSDRLPFGIEENGGTPFLTAASGRHHHQHQHQHQHQHHSNYSLSLTLENKEGPLRSPNSSSKSLTKLSPGTPALFSEAAAHLKKL ELETVKAAGPWPPLHININKAEEKKVSEKTLQTPLLPSPVADHVKCNILKAQLENASRVNIQGGKEESPFVNINKKSSLQDASVRSPIPI RVETAQPAVEKPEIKPPRVRKLTRQYSFDEDDLPPDLAEAVGVTTSTTTNTTTAATQVSVPLPSPKVQNVSSPHKSEGKGLLSPGAKSPS DRGGAFTLEPGDLLMDFTEATPLAEPASNPHCAHSRCSPPLSLPMKEETTGVCMYPPIKTRLIKTFPVDTMNPFPDTFTTGPQFTADFRD -------------------------------------------------------------- >In-frame_ENST00000374541_ENST00000374557_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(transcript)=5951nt_BP=2769nt GACGGCGGCCAGGTCGCGCCGCGAGCGAGCTTCCGCGCCGCCCGCACGCGCGACCTACCTGGGCGCTCCGCGCCCCCGGATGCTGCAGGT TATTCAGCGATAGTTATGACCTCCCGGTTACGTGCGTTGGGTGGAAGAATTAATAATATACGCACCTCGGAGTTACCCAAAGAGAAAACT CGATCAGAAGTCATTTGCAGCATCCACTTTTTAGATGGCGTGGTACAGACCTTTAAAGTTACTAAACAAGACACTGGCCAGGTTCTTCTG GATATGGTGCACAACCACCTGGGTGTGACTGAAAAGGAATATTTTGGTTTACAGCATGATGACGACTCCGTGGACTCTCCTAGATGGCTG GAAGCAAGCAAAGCCATCAGGAAGCAGTTAAAAGGAGGTTTCCCCTGTACCCTGCATTTTCGAGTAAGATTTTTTATACCTGATCCCAAC ACACTGCAGCAAGAACAAACCAGGCACTTGTATTTCTTACAACTGAAGATGGATATTTGCGAAGGAAGGTTAACCTGCCCTCTTAACTCA GCAGTGGTTCTAGCGTCCTATGCCGTACAATCTCATTTTGGAGACTATAATTCTTCCATACATCATCCAGGCTATCTTTCCGATAGTCAC TTTATACCCGATCAAAATGAGGACTTTTTAACAAAAGTCGAATCTCTGCATGAGCAGCACAGTGGGCTAAAACAATCAGAAGCAGAATCC TGCTATATCAACATAGCGCGGACCCTCGACTTCTATGGAGTAGAACTGCACAGTGGTAGGGATCTGCACAATTTAGACCTAATGATTGGA ATTGCTTCCGCGGGTGTTGCTGTGTACCGAAAATACATTTGCACAAGTTTCTATCCTTGGGTGAACATTCTCAAAATTTCTTTCAAAAGG AAAAAGTTCTTCATACATCAGCGACAGAAACAGGCTGAATCCAGGGAACATATTGTGGCCTTCAACATGCTGAATTACCGATCTTGCAAA AACTTGTGGAAATCCTGTGTTGAGCACCATACGTTCTTTCAGGCAAAGAAGCTACTACCTCAGGAAAAGAATGTTCTGTCTCAGTACTGG ACTATGGGCTCTCGGAACACCAAAAAGTCGGTAAATAACCAATATTGCAAAAAGGTGATTGGCGGGATGGTGTGGAACCCAGCCATGCGG AGATCCTTATCAGTGGAGCACTTAGAAACCAAGAGTCTGCCTTCTCGTTCCCCTCCCATTACTCCCAACTGGCGAAGTCCTCGGCTCCGG CACGAAATCCGAAAGCCACGCCACTCTTCTGCAGATAACCTTGCAAATGAAATGACCTACATCACGGAAACGGAAGATGTATTTTACACG TACAAGGGCTCTCTGGCCCCTCAAGACAGCGATTCTGAAGTTTCTCAGAACCGAAGCCCGCACCAAGAGAGTTTATCCGAGAACAATCCG GCACAAAGCTACCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCCTGCTCACCTGACGGCGTTGATCAG CAGCTCTTAGATGACTTCCACAGGGTGACCAAAGGGGGCTCCACCGAGGACGCCAGCCAGTACTACTGTGACAAGAATGATAATGGTGAC AGCTACTTAGTCTTGATCCGTATCACACCAGATGAAGATGGAAAATTTGGATTTAATCTTAAGGGAGGAGTGGATCAAAAGATGCCTCTT GTGGTATCAAGGATAAACCCAGAGTCACCTGCGGACACCTGCATTCCTAAGCTGAACGAAGGGGATCAAATCGTGTTAATCAATGGCCGG GACATCTCAGAACACACGCATGACCAAGTGGTGATGTTCATCAAAGCCAGCCGGGAGTCCCACTCACGGGAGCTGGCCCTGGTGATCAGG AGGAGAGCTGTCCGCTCATTTGCTGACTTCAAGTCTGAAGATGAACTGAACCAGCTTTTCCCCGAAGCCATTTTCCCCATGTGTCCGGAG GGTGGGGACACTTTGGAGGGATCCATGGCACAGCTAAAGAAGGGCCTCGAAAGCGGGACGGTGCTGATCCAGTTTGAGCAACTCTACAGA AAAAAGCCAGGTTTGGCCATCACGTTTGCAAAGCTGCCTCAAAATTTGGACAAAAACCGATATAAAGATGTGCTGCCTTATGACACCACC CGGGTATTATTGCAGGGAAATGAAGATTATATTAATGCAAGTTACGTGAACATGGAAATTCCTGCTGCTAACCTTGTGAACAAGTACATC GCCACTCAGGGGCCCCTGCCGCATACCTGTGCACAGTTTTGGCAGGTTGTCTGGGATCAGAAGTTGTCACTCATTGTCATGTTGACGACT CTCACAGAACGAGGGCGGACCAAATGTCACCAGTACTGGCCAGATCCCCCCGACGTCATGAACCACGGCGGCTTTCACATCCAGTGTCAG TCAGAGGACTGCACCATCGCCTATGTGTCCCGAGAAATGCTGGTCACAAACACCCAGACCGGGGAAGAACACACAGTGACACATCTCCAG TACGTCGCATGGCCTGACCACGGTGTGCCCGATGACTCCTCCGACTTTCTGGAATTTGTAAACTATGTGAGGTCTCTGAGAGTGGACAGC GAGCCCGTCCTAGTTCACTGCAGTGCTGGAATAGGTCGAACCGGTGTGTTGGTCACTATGGAAACAGCCATGTGCCTAACTGAGAGGAAC CTGCCCATTTACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCATGATGGTGCAGACATCAAAACATGCCAAAGGCCAGGAT TTGTTTGATCAGATTGTGTACCACTTGGACCTTGTGGAAACAGATTACTTTGGCCTCCAGTTCCTCGACTCTGCCCAGGTTGCGCACTGG CTGGATCATGCCAAACCCATAAAAAAGCAGATGAAAATTGGACCTGCTTATGCTTTACACTTTCGAGTTAAATACTATTCTTCAGAACCA AACAACCTTCGTGAGGAGTTTACAAGGTACCTGTTTGTTTTACAACTCAGGCATGACATTCTTTCTGGAAAATTGAAATGCCCTTATGAA ACAGCTGTGGAATTAGCTGCTCTCTGTCTACAAGCGGAGCTTGGGGAGTGCGAGCTTCCAGAACACACACCAGAGCTTGTGTCTGAGTTT CGGTTCATTCCAAATCAGACAGAAGCAATGGAATTTGATATCTTCCAGAGATGGAAAGAGTGCAGGGGAAAGAGCCCTGCCCAGGCGGAA CTCTCCTATCTGAATAAAGCGAAGTGGCTGGAAATGTATGGGGTAGACATGCACGTTGTCAGGGGAAGAGATGGCTGTGAATATTCTCTT GGACTGACCCCGACAGGCATATTAATCTTTGAAGGAGCTAACAAAATAGGCTTATTCTTTTGGCCTAAAATTACCAAAATGGATTTTAAA AAGAGCAAATTGACACTCGTGGTGGTCGAGGATGATGATCAGGGACGTGAGCAAGAGCACACGTTTGTGTTCCGGTTAGACAGTGCCAGG ACCTGCAAACACCTTTGGAAGTGTGCAGTTGAGCACCACGCATTCTTCCGACTGCGGACGCCAGGAAACAGCAAATCCAATAGATCCGAC TTTATCAGGCTGGGCTCTCGCTTCAGATTCAGTGGGCGGACAGAATATCAAGCTACACATGGCTCCAGGTTACGAAGAACCAGCACCTTT GAGAGGAAGCCTAGTAAACGTTATCCATCCCGGAGACATTCAACGTTCAAAGCAAGCAACCCAGTGATAGCAGCCCAGCTCTGCTCTAAA ACAAATCCAGAAGTCCATAATTACCAGCCTCAATATCATCCTAATATCCATCCCAGCCAGCCCCGGTGGCATCCTCACTCTCCAAATGTC AGGCCATCCTTTCAGGATGACAGGTCGCATTGGAAAGCATCGGCCAGTGGAGATGACAGCCATTTTGATTATGTCCACGACCAGAACCAG AAGAACTTAGGAGGGATGCAAAGTATGATGTATCGAGATAAACTCATGACTGCACTTTGAGAGACTGAAGCATCTCTCTTCCATTCACCT TCATAGTTTCATTGCATTCCATGAAAAGTGTCTTGGCCTCAGATGGATGGATGTGTTTGGACGAGTGTCTTTAAGGAGTAGTCCTGAAAG GTGTTTTTGGTGTCCATGTAAATATTTGAAGATAAAACCACTATAGCTTGTCATAATTTACTGTTGACTGCATTCTCATTAAAATGAAGG TAAAGGCTCAGGAATCATATTGATGTTCTGATTTTAAAATTGGAGTCAAAGTCTATGTTTATCATTTTACTATGTTCCTGATGTTCTTTG TTATTTAATTAATGGGAGCAAATAAAACCAGAAGAGCTTGGGAAGATTGCTCAGCATATATTCCTGTCGTAGAAGTTGAGATTGCTAGGG TCCAGTTTCCCTAGTGTGGCCTGGACGAGTCATTTCCCCTTCATTGACCTCATTTTCCCCATCTGAAAAGAGAGGGTTGGACTAAGTGAT CTCCAAGGTCCTTTCCAACTCTAAAATTCTGCAATTTGTTAACATTTCATTTTGTTTAGGTTGAGGACATACATTCAAACTAATTTTATC ACAAGGAAAACTGCAATACCCACTTCCTTGACAGAGTTACTCCTTTCAGAAGCTAAATAAAGTATATAACTTATTAGATGTTATATAGAT ACAGGGGGACTTTGAATTTCACATCTTAAAGCAGTTGAGCTACTTTGAATTTAAGCAGTCGTACTAATCTTAAATTGCATAGCATTTGTT TTGATCGAATTTGCTGCTCAAGTATGGGAATAATTTTTAATGTCTTAATGATTGGTGCTGCTAACTTGCGTGATTTCAGAAGACATAATT GTGAATACACACTGTCAGAATTGGGGGATTGGTTTTTACCCTAGACTTCACTCTTAAAAAGCAACGTGCAATCAAGATCATTTATGGCTC AAATGAAAGCATATAAGGTTTTCTTGAAGTTGTGCCAAAGCATTCTGTAGAGTAGGATGAGATGGTTGTTGCCCTAGTCTGTTGGTAGAA CCAGAAATCAATATGTTGTCTTTTAGGTTAAAGCTTGTACCAAAATATTTATTTCCCCCATTTCAAGCCCTGAGTCAAACATTTTTTTCT CTTAATAATAGACCTGAAATGTTTTATTAGTATTTCTGTGAAATCAGTTGATTCTTGTGCCATTTTTGTATATGTAATTGTAATTTTGCC CATGTTAGGCCCTCTAAAAAATGTTTGACATCCTTTGAGATATTTTATTACTAAAATCTGATCTTTTTTGGCTACTGCAAAAATCTATTC AGCAAGAAGGTATCAGCTGCATACCTTGCACAGTGGAGCTGACTACCTATAAACTCTCCCTAAGGCATTTGTTTACAGGTGTATTCCATT TTAGCAGACGTTCTGATGCTCAGTGTATGTGCTGCATACAAATAAATGTGTTCTGAATCTTTTCATCTTATTGATAGCATTTTTACAAAT GTGTTTCCAAGGAATAAAGATTATTCTTGCTTTTTTTTTGACTCCATCTTCATTTTTTTTAAATTGATTCTTGTTGCTATGCAGAAGTCT CATTTGTGAATGACCTTGGTAACAGAACAGTTGGCTTTTGGAAGTCTGAAGGTGAGCATTCAGTTAGGTGGGTGGAGCAAGATCATCCTA GAATGAGGCTGCTCTTGGCAAGAGTGGATCTTATAGGCACAGCAGCTGATGCCTTTCTTCATCTGGGGCAACTCTGGTGAAGGTTGTCCT GCCTGTCACAGGTGCTGAGTAGAGAGAAGTGGTGGCAGTGGGATTTCCTCAGTAATAGTCCTGTAAAGGTACGTGTTTGTCCTGGCTACT TGTGCTCTTCCTGGCAGGAAGGCATCCAAACCCTTATCTGTGGGCTCCTGGAAATTGTGTATGCCATATAATACCCTCTAATAAATACCT >In-frame_ENST00000374541_ENST00000374557_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(amino acids)=1304AA_start in transcript=105_stop in transcript=4019 MTSRLRALGGRINNIRTSELPKEKTRSEVICSIHFLDGVVQTFKVTKQDTGQVLLDMVHNHLGVTEKEYFGLQHDDDSVDSPRWLEASKA IRKQLKGGFPCTLHFRVRFFIPDPNTLQQEQTRHLYFLQLKMDICEGRLTCPLNSAVVLASYAVQSHFGDYNSSIHHPGYLSDSHFIPDQ NEDFLTKVESLHEQHSGLKQSEAESCYINIARTLDFYGVELHSGRDLHNLDLMIGIASAGVAVYRKYICTSFYPWVNILKISFKRKKFFI HQRQKQAESREHIVAFNMLNYRSCKNLWKSCVEHHTFFQAKKLLPQEKNVLSQYWTMGSRNTKKSVNNQYCKKVIGGMVWNPAMRRSLSV EHLETKSLPSRSPPITPNWRSPRLRHEIRKPRHSSADNLANEMTYITETEDVFYTYKGSLAPQDSDSEVSQNRSPHQESLSENNPAQSYL TQKSSSSVSPSSNAPGSCSPDGVDQQLLDDFHRVTKGGSTEDASQYYCDKNDNGDSYLVLIRITPDEDGKFGFNLKGGVDQKMPLVVSRI NPESPADTCIPKLNEGDQIVLINGRDISEHTHDQVVMFIKASRESHSRELALVIRRRAVRSFADFKSEDELNQLFPEAIFPMCPEGGDTL EGSMAQLKKGLESGTVLIQFEQLYRKKPGLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQGNEDYINASYVNMEIPAANLVNKYIATQGP LPHTCAQFWQVVWDQKLSLIVMLTTLTERGRTKCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWP DHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMRDQRAMMVQTSKHAKGQDLFDQI VYHLDLVETDYFGLQFLDSAQVAHWLDHAKPIKKQMKIGPAYALHFRVKYYSSEPNNLREEFTRYLFVLQLRHDILSGKLKCPYETAVEL AALCLQAELGECELPEHTPELVSEFRFIPNQTEAMEFDIFQRWKECRGKSPAQAELSYLNKAKWLEMYGVDMHVVRGRDGCEYSLGLTPT GILIFEGANKIGLFFWPKITKMDFKKSKLTLVVVEDDDQGREQEHTFVFRLDSARTCKHLWKCAVEHHAFFRLRTPGNSKSNRSDFIRLG SRFRFSGRTEYQATHGSRLRRTSTFERKPSKRYPSRRHSTFKASNPVIAAQLCSKTNPEVHNYQPQYHPNIHPSQPRWHPHSPNVRPSFQ -------------------------------------------------------------- >In-frame_ENST00000262539_ENST00000374566_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(transcript)=7535nt_BP=2559nt CTCAGACGGCGGCCAGGTCGCGCCGCGAGCGAGCTTCCGCGCCGCCCGCACGCGCGACCTACCTGGGCGCTCCGCGCCCCCGGATGCTGC AGGTTATTCAGCGATAGTTATGACCTCCCGGTTACGTGCGTTGGGTGGAAGAATTAATAATATACGCACCTCGGAGTTACCCAAAGAGAA AACTCGATCAGAAGTCATTTGCAGCATCCACTTTTTAGATGGCGTGGTACAGACCTTTAAAGTTACTAAACAAGACACTGGCCAGGTTCT TCTGGATATGGTGCACAACCACCTGGGTGTGACTGAAAAGGAATATTTTGGTTTACAGCATGATGACGACTCCGTGGACTCTCCTAGATG GCTGGAAGCAAGCAAAGCCATCAGGAAGCAGTTAAAAGGCACTTGTATTTCTTACAACTGAAGATGGATATTTGCGAAGGAAGGTTAACC TGCCCTCTTAACTCAGCAGTGGTTCTAGCGTCCTATGCCGTACAATCTCATTTTGGAGACTATAATTCTTCCATACATCATCCAGGCTAT CTTTCCGATAGTCACTTTATACCCGATCAAAATGAGGACTTTTTAACAAAAGTCGAATCTCTGCATGAGCAGCACAGTGGGCTAAAACAA TCAGAAGCAGAATCCTGCTATATCAACATAGCGCGGACCCTCGACTTCTATGGAGTAGAACTGCACAGTGGTAGGGATCTGCACAATTTA GACCTAATGATTGGAATTGCTTCCGCGGGTGTTGCTGTGTACCGAAAATACATTTGCACAAGTTTCTATCCTTGGGTGAACATTCTCAAA ATTTCTTTCAAAAGGAAAAAGTTCTTCATACATCAGCGACAGAAACAGGCTGAATCCAGGGAACATATTGTGGCCTTCAACATGCTGAAT TACCGATCTTGCAAAAACTTGTGGAAATCCTGTGTTGAGCACCATACGTTCTTTCAGGCAAAGAAGCTACTACCTCAGGAAAAGAATGTT CTGTCTCAGTACTGGACTATGGGCTCTCGGAACACCAAAAAGCGAAGTCCTCGGCTCCGGCACGAAATCCGAAAGCCACGCCACTCTTCT GCAGATAACCTTGCAAATGAAATGACCTACATCACGGAAACGGAAGATGTATTTTACACGTACAAGGGCTCTCTGGCCCCTCAAGACAGC GATTCTGAAGTTTCTCAGAACCGAAGCCCGCACCAAGAGAGTTTATCCGAGAACAATCCGGCACAAAGCTACCTGACCCAGAAGTCATCC AGTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCCTGCTCACCTGACGGCGTTGATCAGCAGCTCTTAGATGACTTCCACAGGGTGACC AAAGGGGGCTCCACCGAGGACGCCAGCCAGTACTACTGTGACAAGAATGATAATGGTGACAGCTACTTAGTCTTGATCCGTATCACACCA GATGAAGATGGAAAATTTGGATTTAATCTTAAGGGAGGAGTGGATCAAAAGATGCCTCTTGTGGTATCAAGGATAAACCCAGAGTCACCT GCGGACACCTGCATTCCTAAGCTGAACGAAGGGGATCAAATCGTGTTAATCAATGGCCGGGACATCTCAGAACACACGCATGACCAAGTG GTGATGTTCATCAAAGCCAGCCGGGAGTCCCACTCACGGGAGCTGGCCCTGGTGATCAGGAGGAGAGCTGTCCGCTCATTTGCTGACTTC AAGTCTGAAGATGAACTGAACCAGCTTTTCCCCGAAGCCATTTTCCCCATGTGTCCGGAGGGTGGGGACACTTTGGAGGGATCCATGGCA CAGCTAAAGAAGGGCCTCGAAAGCGGGACGGTGCTGATCCAGTTTGAGCAACTCTACAGAAAAAAGCCAGGTTTGGCCATCACGTTTGCA AAGCTGCCTCAAAATTTGGACAAAAACCGATATAAAGATGTGCTGCCTTATGACACCACCCGGGTATTATTGCAGGGAAATGAAGATTAT ATTAATGCAAGTTACGTGAACATGGAAATTCCTGCTGCTAACCTTGTGAACAAGTACATCGCCACTCAGGGGCCCCTGCCGCATACCTGT GCACAGTTTTGGCAGGTTGTCTGGGATCAGAAGTTGTCACTCATTGTCATGTTGACGACTCTCACAGAACGAGGGCGGACCAAATGTCAC CAGTACTGGCCAGATCCCCCCGACGTCATGAACCACGGCGGCTTTCACATCCAGTGTCAGTCAGAGGACTGCACCATCGCCTATGTGTCC CGAGAAATGCTGGTCACAAACACCCAGACCGGGGAAGAACACACAGTGACACATCTCCAGTACGTCGCATGGCCTGACCACGGTGTGCCC GATGACTCCTCCGACTTTCTGGAATTTGTAAACTATGTGAGGTCTCTGAGAGTGGACAGCGAGCCCGTCCTAGTTCACTGCAGTGCTGGA ATAGGTCGAACCGGTGTGTTGGTCACTATGGAAACAGCCATGTGCCTAACTGAGAGGAACCTGCCCATTTACCCACTGGATATTGTCCGA AAAATGCGAGACCAGCGCGCCATGATGGTGCAGACATCAAAACATGCCAAAGGCCAGGATTTGTTTGATCAGATTGTGTACCACTTGGAC CTTGTGGAAACAGATTACTTTGGCCTCCAGTTCCTCGACTCTGCCCAGGTTGCGCACTGGCTGGATCATGCCAAACCCATAAAAAAGCAG ATGAAAATTGGACCTGCTTATGCTTTACACTTTCGAGTTAAATACTATTCTTCAGAACCAAACAACCTTCGTGAGGAGTTTACAAGGTAC CTGTTTGTTTTACAACTCAGGCATGACATTCTTTCTGGAAAATTGAAATGCCCTTATGAAACAGCTGTGGAATTAGCTGCTCTCTGTCTA CAAGCGGAGCTTGGGGAGTGCGAGCTTCCAGAACACACACCAGAGCTTGTGTCTGAGTTTCGGTTCATTCCAAATCAGACAGAAGCAATG GAATTTGATATCTTCCAGAGATGGAAAGAGTGCAGGGGAAAGAGCCCTGCCCAGGCGGAACTCTCCTATCTGAATAAAGCGAAGTGGCTG GAAATGTATGGGGTAGACATGCACGTTGTCAGGGGAAGAGATGGCTGTGAATATTCTCTTGGACTGACCCCGACAGGCATATTAATCTTT GAAGGAGCTAACAAAATAGGCTTATTCTTTTGGCCTAAAATTACCAAAATGGATTTTAAAAAGAGCAAATTGACACTCGTGGTGGTCGAG GATGATGATCAGGGACGTGAGCAAGAGCACACGTTTGTGTTCCGGTTAGACAGTGCCAGGACCTGCAAACACCTTTGGAAGTGTGCAGTT GAGCACCACGCATTCTTCCGACTGCGGACGCCAGGAAACAGCAAATCCAATAGATCCGACTTTATCAGGCTGGGCTCTCGCTTCAGATTC AGTGGGCGGACAGAATATCAAGCTACACATGGCTCCAGGTTACGAAGAACCAGCACCTTTGAGAGGAAGCCTAGTAAACGTTATCCATCC CGGAGACATTCAACGTTCAAAGCAAGCAACCCAGTGATAGCAGCCCAGCTCTGCTCTAAAACAAATCCAGAAGTCCATAATTACCAGCCT CAATATCATCCTAATATCCATCCCAGCCAGCCCCGGTGGCATCCTCACTCTCCAAATGTCAGCTACCCGCTCCCTTCCCCAGTGCTTAGC AGCTCGGACCGGTTGCCTTTTGGCATTGAGGAGAATGGGGGCACACCGTTCCTCACCGCAGCTTCAGGAAGGCATCACCACCAGCACCAG CATCAGCATCAGCACCAGCACCACTCAAACTACAGCCTCTCACTGACCCTGGAGAACAAAGAGGGGCCTCTGAGGTCCCCAAACTCCAGC AGCAAGTCCCTTACAAAACTGAGTCCAGGAACACCTGCCTTGTTCAGTGAAGCCGCTGCCCATCTAAAGAAGCTGGAACTGGAAACTGTG AAGGCTGCTGGACCCTGGCCTCCTCTGCACATCAACATAAACAAGGCTGAAGAAAAGAAAGTCTCGGAGAAAACTCTTCAGACTCCACTT TTGCCTTCCCCTGTTGCGGATCATGTGAAGTGTAACATTCTGAAAGCCCAGTTGGAAAATGCTTCCCGAGTGAACATCCAGGGTGGAAAG GAGGAATCACCGTTTGTAAATATCAATAAGAAATCCAGTCTTCAGGACGCTAGTGTAAGAAGTCCTATTCCTATTCGTGTGGAAACTGCC CAGCCAGCTGTGGAAAAGCCGGAAATCAAGCCTCCCCGAGTGAGGAAGTTAACAAGACAGTATAGTTTTGATGAAGACGACCTCCCTCCA GACCTGGCCGAGGCAGTGGGAGTGACCACATCTACAACCACAAACACCACAACGGCCGCCACACAAGTCTCCGTGCCGCTGCCGTCCCCC AAGGTCCAGAATGTCAGCTCGCCTCACAAGTCAGAAGGCAAAGGCCTGCTGTCCCCTGGGGCCAAGAGCCCCTCTGACCGAGGAGGTGCC TTTACCCTGGAGCCGGGTGATCTTCTGATGGATTTCACAGAAGCCACTCCTCTGGCAGAGCCCGCCAGCAACCCCCACTGTGCCCACTCT CGCTGTTCTCCTCCACTCTCTCTCCCCATGAAGGAAGAGACCACTGGAGTTTGCATGTACCCTCCAATCAAAACGAGGCTGATAAAAACA TTCCCGGTTGATACAATGAACCCGTTTCCTGATACTTTCACCACAGGGCCACAGTTTACTGCAGACTTCAGAGACAGTAAATTACAGTGC TGTCCTGGCCCGACTTCCCCGCTGATCCCAGCAGCGACCCTGAGGCCTTTGACAGAGACCGTCTCCACAGTGCAGACCATTTACACCACC CGGAAACCTGTTTCTCTGGCAGCCAGTGCAGAGACACTCCGGCAGGAACTGGAGAGAGAGAAGATGATGAAAAGACTGTTGATGACCGAA CTGTGAAATTCTCCCCTTGTCACCTGGAAGATGGCATGGTGCCTTCTGTCCGTCTTCTTTCTTCGGGCTTTGTGTGCTCACTCTAGCACA GCATACAAGTGTGTGCTCTGTTCGCCCAGGTCTCCATGGTTAGTTGAAGCCAATTTCTGGCTTGACTTTTATGGGAAAAGTTATTTTATG TCTCCTAAGCATTAGAGTTTTTCTATTACTCTATGTAGTTGAGACAGGATTTGATAAGTCTAGGAAAAGAAAGATGGGAAAACGGGATTC CTTTTCAGAAGTACCTGTGTGTATCTGTTAATAACCACAGGGGTTAATATGATGTAGGATCTTTTACTATCAATTTCAACCATTTGATTT TGTATGATTGAAACTTGCACCGAGCTTTGACTGTTTGTTAAAGAGTCATTTTTAATGAAAGAATAATTCTTTATTGCTGGTTTTTCATTT ACACTGATAAATACACAGATCTTATAAAGTCTTTAACATTCATTTGTATTCAGATGTGAGTAGAAGAACTAAAAAAAGAAAGTTACATAT CACTATGACTGAAGGTACTTCAGCTTAATCTGAAATATAATTTAACTTGTGAACTCCTTGGATATGATATTATTTGGAATAAACAGAATT TATCATTGAACCCAAAGTAGGAAATGATAGCTTACATTGTCTAAAAATCCTTACAAGGTTAAGATGATTCAATATCAAGAAGATTCAGAA AATTATTTCTAAAGTTGATCGATTCATGTCGTATTGATAGAATCTTGACCAGAAGAAATTTTGCTCTTTTTATATAGTTTCAAGAAATGT GTTTTTAAATTTTTATTAATGCACTTGAACAACTTTGCAGGAATAAAGCAACCCCCTAACCACAAAATATCCCTCTAAATTAGTTCCCTA GCTTTCTCAATGAATACACACATATTTTTACATAGCTATGATCGTTGTGTACATTCTCCTTTGTTTTACTTCTCGGCCTAACACTTGTCT CCTCTTGTCAACACAGATTCTACTCTCACCAATTTAAATGTCTTTATATCCATGTAACATGGGTAACCTCACTTCACCCCATTATTAGAT ATTTGAGTTATATCTAATTTTTCACTCTTATAAATAGTGCTGCTATGAATGTCTGTAAAAAAAAAAAACTGCTCCTTCTTTTGGATTATT CCCTTAGGAATATCTCCAAAGAGGGATTACAAGGTCAAAGAGCATGAAGTATTTTATAGCTCTTGTTTTATATTGCCAGATTGCTTTCTA GAAAGATCCAATCTTTGGGTTGGAAGGACCTTAAAGGTCATCTAGTTTAGCCTCCCCACCCCCTCTGAATGCTTGAATCCCCTCGACAAT TTATGATGCCACCAGCAATGTATAAGCATTTCTGTTTACCAATAGCTCTGCCAGTATTGGGTTTTGCCATTTTTATTTATTTTTGCTAGT TTAATAGGTATGTATAGTTGTTCTTGAAGAGTTGTTTTATTTCATTAATTGCTAGCAAGGCTGAGCACTTTTCCATGTGATGATTTACTA GTTGTATTTCCTTGTGTGTAAAATGTTCATTCATTTCTTATGACCACTTGTTAAGAGGAACTGATCTCATATATTTGTATCAGAACTGTA TTTTTATGTTATATTGTATAGTTTGCTCTCCTGCCCCTCTCCTTAAAACTGAATGGTGCCAATAATTTGATACTAATGACTACAAAAAAA GGTAATGCCTCATTTACTAGTATTGTTGTAAAATGAGGAATGTATGTGAATATTCAGATAACCGAGGATTAACCCTTTAAGTGCTGAATC TTTAAAATTTTAATATATTTTTTTTTGAGGGAAATCTTTCTAAAATGTATTACGCACTTCCCTGCCTTAGTAAACAGAGTATACTGGAGA GTATTTAACCTTTTCTTGATGAGTCATGGTCATGATTATAAACATCAGCCCCTTTTATACCTTGGTACGGTGCAGTGATATCATTAAGAG CTATCAATATGTGTAGGGCTTGGCTTGGCCTTTTATAGGATATTATGCTGTTCTCACTGATGGTTTTTTACTGCTCTCTGCTCTGTCAGT GGAGCTATCCGGGGCAATTGTAGCGTTTGGGTCCTTTTACCCCTATGTCCCCCGGCTATACTTTTAAAACAGCTTTAGCTGTTCTTTATC TTGTGCACATGATACAAAATATGTTCCCGTACAATATGGGGCTGTCACTTCTTGCCAACCCAGCACCCTCTTCCTCTTCTAACCTGCTTT CTGAGGCTTCTGCTCTTCACCTCCTGCTCGCTGATGGAAACCTCCAGGGCAAAGCTGAAGGTTTCTTGGGGAAGCCAGGAAAGCCAGTAT TTCCTATGTGTCAGATCTGCTTGGCTTCCAAGAAGGGATGCATGGGCTTTTTGGCCAGTGTTTCCAGGAGGCTCTGGGCTTCCTGCTTCT TCCCCGCTTCCCCCAGAGTTCACAGATGTTGAAGTTTCTGAAGGTTGACGTCACTGGAAGTCTGACCACAAACAAGTTGGCTGTTACTGT >In-frame_ENST00000262539_ENST00000374566_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(amino acids)=1532AA_start in transcript=357_stop in transcript=4955 MAGSKQSHQEAVKRHLYFLQLKMDICEGRLTCPLNSAVVLASYAVQSHFGDYNSSIHHPGYLSDSHFIPDQNEDFLTKVESLHEQHSGLK QSEAESCYINIARTLDFYGVELHSGRDLHNLDLMIGIASAGVAVYRKYICTSFYPWVNILKISFKRKKFFIHQRQKQAESREHIVAFNML NYRSCKNLWKSCVEHHTFFQAKKLLPQEKNVLSQYWTMGSRNTKKRSPRLRHEIRKPRHSSADNLANEMTYITETEDVFYTYKGSLAPQD SDSEVSQNRSPHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCSPDGVDQQLLDDFHRVTKGGSTEDASQYYCDKNDNGDSYLVLIRIT PDEDGKFGFNLKGGVDQKMPLVVSRINPESPADTCIPKLNEGDQIVLINGRDISEHTHDQVVMFIKASRESHSRELALVIRRRAVRSFAD FKSEDELNQLFPEAIFPMCPEGGDTLEGSMAQLKKGLESGTVLIQFEQLYRKKPGLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQGNED YINASYVNMEIPAANLVNKYIATQGPLPHTCAQFWQVVWDQKLSLIVMLTTLTERGRTKCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYV SREMLVTNTQTGEEHTVTHLQYVAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIV RKMRDQRAMMVQTSKHAKGQDLFDQIVYHLDLVETDYFGLQFLDSAQVAHWLDHAKPIKKQMKIGPAYALHFRVKYYSSEPNNLREEFTR YLFVLQLRHDILSGKLKCPYETAVELAALCLQAELGECELPEHTPELVSEFRFIPNQTEAMEFDIFQRWKECRGKSPAQAELSYLNKAKW LEMYGVDMHVVRGRDGCEYSLGLTPTGILIFEGANKIGLFFWPKITKMDFKKSKLTLVVVEDDDQGREQEHTFVFRLDSARTCKHLWKCA VEHHAFFRLRTPGNSKSNRSDFIRLGSRFRFSGRTEYQATHGSRLRRTSTFERKPSKRYPSRRHSTFKASNPVIAAQLCSKTNPEVHNYQ PQYHPNIHPSQPRWHPHSPNVSYPLPSPVLSSSDRLPFGIEENGGTPFLTAASGRHHHQHQHQHQHQHHSNYSLSLTLENKEGPLRSPNS SSKSLTKLSPGTPALFSEAAAHLKKLELETVKAAGPWPPLHININKAEEKKVSEKTLQTPLLPSPVADHVKCNILKAQLENASRVNIQGG KEESPFVNINKKSSLQDASVRSPIPIRVETAQPAVEKPEIKPPRVRKLTRQYSFDEDDLPPDLAEAVGVTTSTTTNTTTAATQVSVPLPS PKVQNVSSPHKSEGKGLLSPGAKSPSDRGGAFTLEPGDLLMDFTEATPLAEPASNPHCAHSRCSPPLSLPMKEETTGVCMYPPIKTRLIK TFPVDTMNPFPDTFTTGPQFTADFRDSKLQCCPGPTSPLIPAATLRPLTETVSTVQTIYTTRKPVSLAASAETLRQELEREKMMKRLLMT -------------------------------------------------------------- >In-frame_ENST00000262539_ENST00000374557_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(transcript)=5741nt_BP=2559nt CTCAGACGGCGGCCAGGTCGCGCCGCGAGCGAGCTTCCGCGCCGCCCGCACGCGCGACCTACCTGGGCGCTCCGCGCCCCCGGATGCTGC AGGTTATTCAGCGATAGTTATGACCTCCCGGTTACGTGCGTTGGGTGGAAGAATTAATAATATACGCACCTCGGAGTTACCCAAAGAGAA AACTCGATCAGAAGTCATTTGCAGCATCCACTTTTTAGATGGCGTGGTACAGACCTTTAAAGTTACTAAACAAGACACTGGCCAGGTTCT TCTGGATATGGTGCACAACCACCTGGGTGTGACTGAAAAGGAATATTTTGGTTTACAGCATGATGACGACTCCGTGGACTCTCCTAGATG GCTGGAAGCAAGCAAAGCCATCAGGAAGCAGTTAAAAGGCACTTGTATTTCTTACAACTGAAGATGGATATTTGCGAAGGAAGGTTAACC TGCCCTCTTAACTCAGCAGTGGTTCTAGCGTCCTATGCCGTACAATCTCATTTTGGAGACTATAATTCTTCCATACATCATCCAGGCTAT CTTTCCGATAGTCACTTTATACCCGATCAAAATGAGGACTTTTTAACAAAAGTCGAATCTCTGCATGAGCAGCACAGTGGGCTAAAACAA TCAGAAGCAGAATCCTGCTATATCAACATAGCGCGGACCCTCGACTTCTATGGAGTAGAACTGCACAGTGGTAGGGATCTGCACAATTTA GACCTAATGATTGGAATTGCTTCCGCGGGTGTTGCTGTGTACCGAAAATACATTTGCACAAGTTTCTATCCTTGGGTGAACATTCTCAAA ATTTCTTTCAAAAGGAAAAAGTTCTTCATACATCAGCGACAGAAACAGGCTGAATCCAGGGAACATATTGTGGCCTTCAACATGCTGAAT TACCGATCTTGCAAAAACTTGTGGAAATCCTGTGTTGAGCACCATACGTTCTTTCAGGCAAAGAAGCTACTACCTCAGGAAAAGAATGTT CTGTCTCAGTACTGGACTATGGGCTCTCGGAACACCAAAAAGCGAAGTCCTCGGCTCCGGCACGAAATCCGAAAGCCACGCCACTCTTCT GCAGATAACCTTGCAAATGAAATGACCTACATCACGGAAACGGAAGATGTATTTTACACGTACAAGGGCTCTCTGGCCCCTCAAGACAGC GATTCTGAAGTTTCTCAGAACCGAAGCCCGCACCAAGAGAGTTTATCCGAGAACAATCCGGCACAAAGCTACCTGACCCAGAAGTCATCC AGTTCTGTGTCTCCATCTTCAAATGCTCCAGGCTCCTGCTCACCTGACGGCGTTGATCAGCAGCTCTTAGATGACTTCCACAGGGTGACC AAAGGGGGCTCCACCGAGGACGCCAGCCAGTACTACTGTGACAAGAATGATAATGGTGACAGCTACTTAGTCTTGATCCGTATCACACCA GATGAAGATGGAAAATTTGGATTTAATCTTAAGGGAGGAGTGGATCAAAAGATGCCTCTTGTGGTATCAAGGATAAACCCAGAGTCACCT GCGGACACCTGCATTCCTAAGCTGAACGAAGGGGATCAAATCGTGTTAATCAATGGCCGGGACATCTCAGAACACACGCATGACCAAGTG GTGATGTTCATCAAAGCCAGCCGGGAGTCCCACTCACGGGAGCTGGCCCTGGTGATCAGGAGGAGAGCTGTCCGCTCATTTGCTGACTTC AAGTCTGAAGATGAACTGAACCAGCTTTTCCCCGAAGCCATTTTCCCCATGTGTCCGGAGGGTGGGGACACTTTGGAGGGATCCATGGCA CAGCTAAAGAAGGGCCTCGAAAGCGGGACGGTGCTGATCCAGTTTGAGCAACTCTACAGAAAAAAGCCAGGTTTGGCCATCACGTTTGCA AAGCTGCCTCAAAATTTGGACAAAAACCGATATAAAGATGTGCTGCCTTATGACACCACCCGGGTATTATTGCAGGGAAATGAAGATTAT ATTAATGCAAGTTACGTGAACATGGAAATTCCTGCTGCTAACCTTGTGAACAAGTACATCGCCACTCAGGGGCCCCTGCCGCATACCTGT GCACAGTTTTGGCAGGTTGTCTGGGATCAGAAGTTGTCACTCATTGTCATGTTGACGACTCTCACAGAACGAGGGCGGACCAAATGTCAC CAGTACTGGCCAGATCCCCCCGACGTCATGAACCACGGCGGCTTTCACATCCAGTGTCAGTCAGAGGACTGCACCATCGCCTATGTGTCC CGAGAAATGCTGGTCACAAACACCCAGACCGGGGAAGAACACACAGTGACACATCTCCAGTACGTCGCATGGCCTGACCACGGTGTGCCC GATGACTCCTCCGACTTTCTGGAATTTGTAAACTATGTGAGGTCTCTGAGAGTGGACAGCGAGCCCGTCCTAGTTCACTGCAGTGCTGGA ATAGGTCGAACCGGTGTGTTGGTCACTATGGAAACAGCCATGTGCCTAACTGAGAGGAACCTGCCCATTTACCCACTGGATATTGTCCGA AAAATGCGAGACCAGCGCGCCATGATGGTGCAGACATCAAAACATGCCAAAGGCCAGGATTTGTTTGATCAGATTGTGTACCACTTGGAC CTTGTGGAAACAGATTACTTTGGCCTCCAGTTCCTCGACTCTGCCCAGGTTGCGCACTGGCTGGATCATGCCAAACCCATAAAAAAGCAG ATGAAAATTGGACCTGCTTATGCTTTACACTTTCGAGTTAAATACTATTCTTCAGAACCAAACAACCTTCGTGAGGAGTTTACAAGGTAC CTGTTTGTTTTACAACTCAGGCATGACATTCTTTCTGGAAAATTGAAATGCCCTTATGAAACAGCTGTGGAATTAGCTGCTCTCTGTCTA CAAGCGGAGCTTGGGGAGTGCGAGCTTCCAGAACACACACCAGAGCTTGTGTCTGAGTTTCGGTTCATTCCAAATCAGACAGAAGCAATG GAATTTGATATCTTCCAGAGATGGAAAGAGTGCAGGGGAAAGAGCCCTGCCCAGGCGGAACTCTCCTATCTGAATAAAGCGAAGTGGCTG GAAATGTATGGGGTAGACATGCACGTTGTCAGGGGAAGAGATGGCTGTGAATATTCTCTTGGACTGACCCCGACAGGCATATTAATCTTT GAAGGAGCTAACAAAATAGGCTTATTCTTTTGGCCTAAAATTACCAAAATGGATTTTAAAAAGAGCAAATTGACACTCGTGGTGGTCGAG GATGATGATCAGGGACGTGAGCAAGAGCACACGTTTGTGTTCCGGTTAGACAGTGCCAGGACCTGCAAACACCTTTGGAAGTGTGCAGTT GAGCACCACGCATTCTTCCGACTGCGGACGCCAGGAAACAGCAAATCCAATAGATCCGACTTTATCAGGCTGGGCTCTCGCTTCAGATTC AGTGGGCGGACAGAATATCAAGCTACACATGGCTCCAGGTTACGAAGAACCAGCACCTTTGAGAGGAAGCCTAGTAAACGTTATCCATCC CGGAGACATTCAACGTTCAAAGCAAGCAACCCAGTGATAGCAGCCCAGCTCTGCTCTAAAACAAATCCAGAAGTCCATAATTACCAGCCT CAATATCATCCTAATATCCATCCCAGCCAGCCCCGGTGGCATCCTCACTCTCCAAATGTCAGGCCATCCTTTCAGGATGACAGGTCGCAT TGGAAAGCATCGGCCAGTGGAGATGACAGCCATTTTGATTATGTCCACGACCAGAACCAGAAGAACTTAGGAGGGATGCAAAGTATGATG TATCGAGATAAACTCATGACTGCACTTTGAGAGACTGAAGCATCTCTCTTCCATTCACCTTCATAGTTTCATTGCATTCCATGAAAAGTG TCTTGGCCTCAGATGGATGGATGTGTTTGGACGAGTGTCTTTAAGGAGTAGTCCTGAAAGGTGTTTTTGGTGTCCATGTAAATATTTGAA GATAAAACCACTATAGCTTGTCATAATTTACTGTTGACTGCATTCTCATTAAAATGAAGGTAAAGGCTCAGGAATCATATTGATGTTCTG ATTTTAAAATTGGAGTCAAAGTCTATGTTTATCATTTTACTATGTTCCTGATGTTCTTTGTTATTTAATTAATGGGAGCAAATAAAACCA GAAGAGCTTGGGAAGATTGCTCAGCATATATTCCTGTCGTAGAAGTTGAGATTGCTAGGGTCCAGTTTCCCTAGTGTGGCCTGGACGAGT CATTTCCCCTTCATTGACCTCATTTTCCCCATCTGAAAAGAGAGGGTTGGACTAAGTGATCTCCAAGGTCCTTTCCAACTCTAAAATTCT GCAATTTGTTAACATTTCATTTTGTTTAGGTTGAGGACATACATTCAAACTAATTTTATCACAAGGAAAACTGCAATACCCACTTCCTTG ACAGAGTTACTCCTTTCAGAAGCTAAATAAAGTATATAACTTATTAGATGTTATATAGATACAGGGGGACTTTGAATTTCACATCTTAAA GCAGTTGAGCTACTTTGAATTTAAGCAGTCGTACTAATCTTAAATTGCATAGCATTTGTTTTGATCGAATTTGCTGCTCAAGTATGGGAA TAATTTTTAATGTCTTAATGATTGGTGCTGCTAACTTGCGTGATTTCAGAAGACATAATTGTGAATACACACTGTCAGAATTGGGGGATT GGTTTTTACCCTAGACTTCACTCTTAAAAAGCAACGTGCAATCAAGATCATTTATGGCTCAAATGAAAGCATATAAGGTTTTCTTGAAGT TGTGCCAAAGCATTCTGTAGAGTAGGATGAGATGGTTGTTGCCCTAGTCTGTTGGTAGAACCAGAAATCAATATGTTGTCTTTTAGGTTA AAGCTTGTACCAAAATATTTATTTCCCCCATTTCAAGCCCTGAGTCAAACATTTTTTTCTCTTAATAATAGACCTGAAATGTTTTATTAG TATTTCTGTGAAATCAGTTGATTCTTGTGCCATTTTTGTATATGTAATTGTAATTTTGCCCATGTTAGGCCCTCTAAAAAATGTTTGACA TCCTTTGAGATATTTTATTACTAAAATCTGATCTTTTTTGGCTACTGCAAAAATCTATTCAGCAAGAAGGTATCAGCTGCATACCTTGCA CAGTGGAGCTGACTACCTATAAACTCTCCCTAAGGCATTTGTTTACAGGTGTATTCCATTTTAGCAGACGTTCTGATGCTCAGTGTATGT GCTGCATACAAATAAATGTGTTCTGAATCTTTTCATCTTATTGATAGCATTTTTACAAATGTGTTTCCAAGGAATAAAGATTATTCTTGC TTTTTTTTTGACTCCATCTTCATTTTTTTTAAATTGATTCTTGTTGCTATGCAGAAGTCTCATTTGTGAATGACCTTGGTAACAGAACAG TTGGCTTTTGGAAGTCTGAAGGTGAGCATTCAGTTAGGTGGGTGGAGCAAGATCATCCTAGAATGAGGCTGCTCTTGGCAAGAGTGGATC TTATAGGCACAGCAGCTGATGCCTTTCTTCATCTGGGGCAACTCTGGTGAAGGTTGTCCTGCCTGTCACAGGTGCTGAGTAGAGAGAAGT GGTGGCAGTGGGATTTCCTCAGTAATAGTCCTGTAAAGGTACGTGTTTGTCCTGGCTACTTGTGCTCTTCCTGGCAGGAAGGCATCCAAA >In-frame_ENST00000262539_ENST00000374557_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(amino acids)=1150AA_start in transcript=357_stop in transcript=3809 MAGSKQSHQEAVKRHLYFLQLKMDICEGRLTCPLNSAVVLASYAVQSHFGDYNSSIHHPGYLSDSHFIPDQNEDFLTKVESLHEQHSGLK QSEAESCYINIARTLDFYGVELHSGRDLHNLDLMIGIASAGVAVYRKYICTSFYPWVNILKISFKRKKFFIHQRQKQAESREHIVAFNML NYRSCKNLWKSCVEHHTFFQAKKLLPQEKNVLSQYWTMGSRNTKKRSPRLRHEIRKPRHSSADNLANEMTYITETEDVFYTYKGSLAPQD SDSEVSQNRSPHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCSPDGVDQQLLDDFHRVTKGGSTEDASQYYCDKNDNGDSYLVLIRIT PDEDGKFGFNLKGGVDQKMPLVVSRINPESPADTCIPKLNEGDQIVLINGRDISEHTHDQVVMFIKASRESHSRELALVIRRRAVRSFAD FKSEDELNQLFPEAIFPMCPEGGDTLEGSMAQLKKGLESGTVLIQFEQLYRKKPGLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQGNED YINASYVNMEIPAANLVNKYIATQGPLPHTCAQFWQVVWDQKLSLIVMLTTLTERGRTKCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYV SREMLVTNTQTGEEHTVTHLQYVAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIV RKMRDQRAMMVQTSKHAKGQDLFDQIVYHLDLVETDYFGLQFLDSAQVAHWLDHAKPIKKQMKIGPAYALHFRVKYYSSEPNNLREEFTR YLFVLQLRHDILSGKLKCPYETAVELAALCLQAELGECELPEHTPELVSEFRFIPNQTEAMEFDIFQRWKECRGKSPAQAELSYLNKAKW LEMYGVDMHVVRGRDGCEYSLGLTPTGILIFEGANKIGLFFWPKITKMDFKKSKLTLVVVEDDDQGREQEHTFVFRLDSARTCKHLWKCA VEHHAFFRLRTPGNSKSNRSDFIRLGSRFRFSGRTEYQATHGSRLRRTSTFERKPSKRYPSRRHSTFKASNPVIAAQLCSKTNPEVHNYQ -------------------------------------------------------------- >In-frame_ENST00000394827_ENST00000374566_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(transcript)=6522nt_BP=1546nt AGGTGCACTGACAATAGACATGTCAGGGGGTCAAGTTAGTGACTGTGCTCTGCAAGTGGGATGAACAGCCAGAAAAGCAGCCCCCACCAC CTCTGTTAGGTGGGAGACCTCTTCCTGCCGGTGGGAAGCCACTTTGTGCTGGGTCTTCAGAGGAGGCTGGCCCTCCTGAGGGTCTGGGAA CCCCCATTGCTCCAGGAGTTTATCCGAGAACAATCCGGCACAAAGCTACCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTCAAA TGCTCCAGGCTCCTGCTCACCTGACGGCGTTGATCAGCAGCTCTTAGATGACTTCCACAGGGTGACCAAAGGGGGCTCCACCGAGGACGC CAGCCAGTACTACTGTGACAAGAATGATAATGGTGACAGCTACTTAGTCTTGATCCGTATCACACCAGATGAAGATGGAAAATTTGGATT TAATCTTAAGGGAGGAGTGGATCAAAAGATGCCTCTTGTGGTATCAAGGATAAACCCAGAGTCACCTGCGGACACCTGCATTCCTAAGCT GAACGAAGGGGATCAAATCGTGTTAATCAATGGCCGGGACATCTCAGAACACACGCATGACCAAGTGGTGATGTTCATCAAAGCCAGCCG GGAGTCCCACTCACGGGAGCTGGCCCTGGTGATCAGGAGGAGAGCTGTCCGCTCATTTGCTGACTTCAAGTCTGAAGATGAACTGAACCA GCTTTTCCCCGAAGCCATTTTCCCCATGTGTCCGGAGGGTGGGGACACTTTGGAGGGATCCATGGCACAGCTAAAGAAGGGCCTCGAAAG CGGGACGGTGCTGATCCAGTTTGAGCAACTCTACAGAAAAAAGCCAGGTTTGGCCATCACGTTTGCAAAGCTGCCTCAAAATTTGGACAA AAACCGATATAAAGATGTGCTGCCTTATGACACCACCCGGGTATTATTGCAGGGAAATGAAGATTATATTAATGCAAGTTACGTGAACAT GGAAATTCCTGCTGCTAACCTTGTGAACAAGTACATCGCCACTCAGGGGCCCCTGCCGCATACCTGTGCACAGTTTTGGCAGGTTGTCTG GGATCAGAAGTTGTCACTCATTGTCATGTTGACGACTCTCACAGAACGAGGGCGGACCAAATGTCACCAGTACTGGCCAGATCCCCCCGA CGTCATGAACCACGGCGGCTTTCACATCCAGTGTCAGTCAGAGGACTGCACCATCGCCTATGTGTCCCGAGAAATGCTGGTCACAAACAC CCAGACCGGGGAAGAACACACAGTGACACATCTCCAGTACGTCGCATGGCCTGACCACGGTGTGCCCGATGACTCCTCCGACTTTCTGGA ATTTGTAAACTATGTGAGGTCTCTGAGAGTGGACAGCGAGCCCGTCCTAGTTCACTGCAGTGCTGGAATAGGTCGAACCGGTGTGTTGGT CACTATGGAAACAGCCATGTGCCTAACTGAGAGGAACCTGCCCATTTACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCAT GATGGTGCAGACATCAAAACATGCCAAAGGCCAGGATTTGTTTGATCAGATTGTGTACCACTTGGACCTTGTGGAAACAGATTACTTTGG CCTCCAGTTCCTCGACTCTGCCCAGGTTGCGCACTGGCTGGATCATGCCAAACCCATAAAAAAGCAGATGAAAATTGGACCTGCTTATGC TTTACACTTTCGAGTTAAATACTATTCTTCAGAACCAAACAACCTTCGTGAGGAGTTTACAAGGTACCTGTTTGTTTTACAACTCAGGCA TGACATTCTTTCTGGAAAATTGAAATGCCCTTATGAAACAGCTGTGGAATTAGCTGCTCTCTGTCTACAAGCGGAGCTTGGGGAGTGCGA GCTTCCAGAACACACACCAGAGCTTGTGTCTGAGTTTCGGTTCATTCCAAATCAGACAGAAGCAATGGAATTTGATATCTTCCAGAGATG GAAAGAGTGCAGGGGAAAGAGCCCTGCCCAGGCGGAACTCTCCTATCTGAATAAAGCGAAGTGGCTGGAAATGTATGGGGTAGACATGCA CGTTGTCAGGGGAAGAGATGGCTGTGAATATTCTCTTGGACTGACCCCGACAGGCATATTAATCTTTGAAGGAGCTAACAAAATAGGCTT ATTCTTTTGGCCTAAAATTACCAAAATGGATTTTAAAAAGAGCAAATTGACACTCGTGGTGGTCGAGGATGATGATCAGGGACGTGAGCA AGAGCACACGTTTGTGTTCCGGTTAGACAGTGCCAGGACCTGCAAACACCTTTGGAAGTGTGCAGTTGAGCACCACGCATTCTTCCGACT GCGGACGCCAGGAAACAGCAAATCCAATAGATCCGACTTTATCAGGCTGGGCTCTCGCTTCAGATTCAGTGGGCGGACAGAATATCAAGC TACACATGGCTCCAGGTTACGAAGAACCAGCACCTTTGAGAGGAAGCCTAGTAAACGTTATCCATCCCGGAGACATTCAACGTTCAAAGC AAGCAACCCAGTGATAGCAGCCCAGCTCTGCTCTAAAACAAATCCAGAAGTCCATAATTACCAGCCTCAATATCATCCTAATATCCATCC CAGCCAGCCCCGGTGGCATCCTCACTCTCCAAATGTCAGCTACCCGCTCCCTTCCCCAGTGCTTAGCAGCTCGGACCGGTTGCCTTTTGG CATTGAGGAGAATGGGGGCACACCGTTCCTCACCGCAGCTTCAGGAAGGCATCACCACCAGCACCAGCATCAGCATCAGCACCAGCACCA CTCAAACTACAGCCTCTCACTGACCCTGGAGAACAAAGAGGGGCCTCTGAGGTCCCCAAACTCCAGCAGCAAGTCCCTTACAAAACTGAG TCCAGGAACACCTGCCTTGTTCAGTGAAGCCGCTGCCCATCTAAAGAAGCTGGAACTGGAAACTGTGAAGGCTGCTGGACCCTGGCCTCC TCTGCACATCAACATAAACAAGGCTGAAGAAAAGAAAGTCTCGGAGAAAACTCTTCAGACTCCACTTTTGCCTTCCCCTGTTGCGGATCA TGTGAAGTGTAACATTCTGAAAGCCCAGTTGGAAAATGCTTCCCGAGTGAACATCCAGGGTGGAAAGGAGGAATCACCGTTTGTAAATAT CAATAAGAAATCCAGTCTTCAGGACGCTAGTGTAAGAAGTCCTATTCCTATTCGTGTGGAAACTGCCCAGCCAGCTGTGGAAAAGCCGGA AATCAAGCCTCCCCGAGTGAGGAAGTTAACAAGACAGTATAGTTTTGATGAAGACGACCTCCCTCCAGACCTGGCCGAGGCAGTGGGAGT GACCACATCTACAACCACAAACACCACAACGGCCGCCACACAAGTCTCCGTGCCGCTGCCGTCCCCCAAGGTCCAGAATGTCAGCTCGCC TCACAAGTCAGAAGGCAAAGGCCTGCTGTCCCCTGGGGCCAAGAGCCCCTCTGACCGAGGAGGTGCCTTTACCCTGGAGCCGGGTGATCT TCTGATGGATTTCACAGAAGCCACTCCTCTGGCAGAGCCCGCCAGCAACCCCCACTGTGCCCACTCTCGCTGTTCTCCTCCACTCTCTCT CCCCATGAAGGAAGAGACCACTGGAGTTTGCATGTACCCTCCAATCAAAACGAGGCTGATAAAAACATTCCCGGTTGATACAATGAACCC GTTTCCTGATACTTTCACCACAGGGCCACAGTTTACTGCAGACTTCAGAGACAGTAAATTACAGTGCTGTCCTGGCCCGACTTCCCCGCT GATCCCAGCAGCGACCCTGAGGCCTTTGACAGAGACCGTCTCCACAGTGCAGACCATTTACACCACCCGGAAACCTGTTTCTCTGGCAGC CAGTGCAGAGACACTCCGGCAGGAACTGGAGAGAGAGAAGATGATGAAAAGACTGTTGATGACCGAACTGTGAAATTCTCCCCTTGTCAC CTGGAAGATGGCATGGTGCCTTCTGTCCGTCTTCTTTCTTCGGGCTTTGTGTGCTCACTCTAGCACAGCATACAAGTGTGTGCTCTGTTC GCCCAGGTCTCCATGGTTAGTTGAAGCCAATTTCTGGCTTGACTTTTATGGGAAAAGTTATTTTATGTCTCCTAAGCATTAGAGTTTTTC TATTACTCTATGTAGTTGAGACAGGATTTGATAAGTCTAGGAAAAGAAAGATGGGAAAACGGGATTCCTTTTCAGAAGTACCTGTGTGTA TCTGTTAATAACCACAGGGGTTAATATGATGTAGGATCTTTTACTATCAATTTCAACCATTTGATTTTGTATGATTGAAACTTGCACCGA GCTTTGACTGTTTGTTAAAGAGTCATTTTTAATGAAAGAATAATTCTTTATTGCTGGTTTTTCATTTACACTGATAAATACACAGATCTT ATAAAGTCTTTAACATTCATTTGTATTCAGATGTGAGTAGAAGAACTAAAAAAAGAAAGTTACATATCACTATGACTGAAGGTACTTCAG CTTAATCTGAAATATAATTTAACTTGTGAACTCCTTGGATATGATATTATTTGGAATAAACAGAATTTATCATTGAACCCAAAGTAGGAA ATGATAGCTTACATTGTCTAAAAATCCTTACAAGGTTAAGATGATTCAATATCAAGAAGATTCAGAAAATTATTTCTAAAGTTGATCGAT TCATGTCGTATTGATAGAATCTTGACCAGAAGAAATTTTGCTCTTTTTATATAGTTTCAAGAAATGTGTTTTTAAATTTTTATTAATGCA CTTGAACAACTTTGCAGGAATAAAGCAACCCCCTAACCACAAAATATCCCTCTAAATTAGTTCCCTAGCTTTCTCAATGAATACACACAT ATTTTTACATAGCTATGATCGTTGTGTACATTCTCCTTTGTTTTACTTCTCGGCCTAACACTTGTCTCCTCTTGTCAACACAGATTCTAC TCTCACCAATTTAAATGTCTTTATATCCATGTAACATGGGTAACCTCACTTCACCCCATTATTAGATATTTGAGTTATATCTAATTTTTC ACTCTTATAAATAGTGCTGCTATGAATGTCTGTAAAAAAAAAAAACTGCTCCTTCTTTTGGATTATTCCCTTAGGAATATCTCCAAAGAG GGATTACAAGGTCAAAGAGCATGAAGTATTTTATAGCTCTTGTTTTATATTGCCAGATTGCTTTCTAGAAAGATCCAATCTTTGGGTTGG AAGGACCTTAAAGGTCATCTAGTTTAGCCTCCCCACCCCCTCTGAATGCTTGAATCCCCTCGACAATTTATGATGCCACCAGCAATGTAT AAGCATTTCTGTTTACCAATAGCTCTGCCAGTATTGGGTTTTGCCATTTTTATTTATTTTTGCTAGTTTAATAGGTATGTATAGTTGTTC TTGAAGAGTTGTTTTATTTCATTAATTGCTAGCAAGGCTGAGCACTTTTCCATGTGATGATTTACTAGTTGTATTTCCTTGTGTGTAAAA TGTTCATTCATTTCTTATGACCACTTGTTAAGAGGAACTGATCTCATATATTTGTATCAGAACTGTATTTTTATGTTATATTGTATAGTT TGCTCTCCTGCCCCTCTCCTTAAAACTGAATGGTGCCAATAATTTGATACTAATGACTACAAAAAAAGGTAATGCCTCATTTACTAGTAT TGTTGTAAAATGAGGAATGTATGTGAATATTCAGATAACCGAGGATTAACCCTTTAAGTGCTGAATCTTTAAAATTTTAATATATTTTTT TTTGAGGGAAATCTTTCTAAAATGTATTACGCACTTCCCTGCCTTAGTAAACAGAGTATACTGGAGAGTATTTAACCTTTTCTTGATGAG TCATGGTCATGATTATAAACATCAGCCCCTTTTATACCTTGGTACGGTGCAGTGATATCATTAAGAGCTATCAATATGTGTAGGGCTTGG CTTGGCCTTTTATAGGATATTATGCTGTTCTCACTGATGGTTTTTTACTGCTCTCTGCTCTGTCAGTGGAGCTATCCGGGGCAATTGTAG CGTTTGGGTCCTTTTACCCCTATGTCCCCCGGCTATACTTTTAAAACAGCTTTAGCTGTTCTTTATCTTGTGCACATGATACAAAATATG TTCCCGTACAATATGGGGCTGTCACTTCTTGCCAACCCAGCACCCTCTTCCTCTTCTAACCTGCTTTCTGAGGCTTCTGCTCTTCACCTC CTGCTCGCTGATGGAAACCTCCAGGGCAAAGCTGAAGGTTTCTTGGGGAAGCCAGGAAAGCCAGTATTTCCTATGTGTCAGATCTGCTTG GCTTCCAAGAAGGGATGCATGGGCTTTTTGGCCAGTGTTTCCAGGAGGCTCTGGGCTTCCTGCTTCTTCCCCGCTTCCCCCAGAGTTCAC AGATGTTGAAGTTTCTGAAGGTTGACGTCACTGGAAGTCTGACCACAAACAAGTTGGCTGTTACTGTATTTGAAACCCAGTACCTTTGGC >In-frame_ENST00000394827_ENST00000374566_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(amino acids)=1237AA_start in transcript=229_stop in transcript=3942 MTQKSSSSVSPSSNAPGSCSPDGVDQQLLDDFHRVTKGGSTEDASQYYCDKNDNGDSYLVLIRITPDEDGKFGFNLKGGVDQKMPLVVSR INPESPADTCIPKLNEGDQIVLINGRDISEHTHDQVVMFIKASRESHSRELALVIRRRAVRSFADFKSEDELNQLFPEAIFPMCPEGGDT LEGSMAQLKKGLESGTVLIQFEQLYRKKPGLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQGNEDYINASYVNMEIPAANLVNKYIATQG PLPHTCAQFWQVVWDQKLSLIVMLTTLTERGRTKCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAW PDHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMRDQRAMMVQTSKHAKGQDLFDQ IVYHLDLVETDYFGLQFLDSAQVAHWLDHAKPIKKQMKIGPAYALHFRVKYYSSEPNNLREEFTRYLFVLQLRHDILSGKLKCPYETAVE LAALCLQAELGECELPEHTPELVSEFRFIPNQTEAMEFDIFQRWKECRGKSPAQAELSYLNKAKWLEMYGVDMHVVRGRDGCEYSLGLTP TGILIFEGANKIGLFFWPKITKMDFKKSKLTLVVVEDDDQGREQEHTFVFRLDSARTCKHLWKCAVEHHAFFRLRTPGNSKSNRSDFIRL GSRFRFSGRTEYQATHGSRLRRTSTFERKPSKRYPSRRHSTFKASNPVIAAQLCSKTNPEVHNYQPQYHPNIHPSQPRWHPHSPNVSYPL PSPVLSSSDRLPFGIEENGGTPFLTAASGRHHHQHQHQHQHQHHSNYSLSLTLENKEGPLRSPNSSSKSLTKLSPGTPALFSEAAAHLKK LELETVKAAGPWPPLHININKAEEKKVSEKTLQTPLLPSPVADHVKCNILKAQLENASRVNIQGGKEESPFVNINKKSSLQDASVRSPIP IRVETAQPAVEKPEIKPPRVRKLTRQYSFDEDDLPPDLAEAVGVTTSTTTNTTTAATQVSVPLPSPKVQNVSSPHKSEGKGLLSPGAKSP SDRGGAFTLEPGDLLMDFTEATPLAEPASNPHCAHSRCSPPLSLPMKEETTGVCMYPPIKTRLIKTFPVDTMNPFPDTFTTGPQFTADFR -------------------------------------------------------------- >In-frame_ENST00000394827_ENST00000374557_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(transcript)=4728nt_BP=1546nt AGGTGCACTGACAATAGACATGTCAGGGGGTCAAGTTAGTGACTGTGCTCTGCAAGTGGGATGAACAGCCAGAAAAGCAGCCCCCACCAC CTCTGTTAGGTGGGAGACCTCTTCCTGCCGGTGGGAAGCCACTTTGTGCTGGGTCTTCAGAGGAGGCTGGCCCTCCTGAGGGTCTGGGAA CCCCCATTGCTCCAGGAGTTTATCCGAGAACAATCCGGCACAAAGCTACCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTCAAA TGCTCCAGGCTCCTGCTCACCTGACGGCGTTGATCAGCAGCTCTTAGATGACTTCCACAGGGTGACCAAAGGGGGCTCCACCGAGGACGC CAGCCAGTACTACTGTGACAAGAATGATAATGGTGACAGCTACTTAGTCTTGATCCGTATCACACCAGATGAAGATGGAAAATTTGGATT TAATCTTAAGGGAGGAGTGGATCAAAAGATGCCTCTTGTGGTATCAAGGATAAACCCAGAGTCACCTGCGGACACCTGCATTCCTAAGCT GAACGAAGGGGATCAAATCGTGTTAATCAATGGCCGGGACATCTCAGAACACACGCATGACCAAGTGGTGATGTTCATCAAAGCCAGCCG GGAGTCCCACTCACGGGAGCTGGCCCTGGTGATCAGGAGGAGAGCTGTCCGCTCATTTGCTGACTTCAAGTCTGAAGATGAACTGAACCA GCTTTTCCCCGAAGCCATTTTCCCCATGTGTCCGGAGGGTGGGGACACTTTGGAGGGATCCATGGCACAGCTAAAGAAGGGCCTCGAAAG CGGGACGGTGCTGATCCAGTTTGAGCAACTCTACAGAAAAAAGCCAGGTTTGGCCATCACGTTTGCAAAGCTGCCTCAAAATTTGGACAA AAACCGATATAAAGATGTGCTGCCTTATGACACCACCCGGGTATTATTGCAGGGAAATGAAGATTATATTAATGCAAGTTACGTGAACAT GGAAATTCCTGCTGCTAACCTTGTGAACAAGTACATCGCCACTCAGGGGCCCCTGCCGCATACCTGTGCACAGTTTTGGCAGGTTGTCTG GGATCAGAAGTTGTCACTCATTGTCATGTTGACGACTCTCACAGAACGAGGGCGGACCAAATGTCACCAGTACTGGCCAGATCCCCCCGA CGTCATGAACCACGGCGGCTTTCACATCCAGTGTCAGTCAGAGGACTGCACCATCGCCTATGTGTCCCGAGAAATGCTGGTCACAAACAC CCAGACCGGGGAAGAACACACAGTGACACATCTCCAGTACGTCGCATGGCCTGACCACGGTGTGCCCGATGACTCCTCCGACTTTCTGGA ATTTGTAAACTATGTGAGGTCTCTGAGAGTGGACAGCGAGCCCGTCCTAGTTCACTGCAGTGCTGGAATAGGTCGAACCGGTGTGTTGGT CACTATGGAAACAGCCATGTGCCTAACTGAGAGGAACCTGCCCATTTACCCACTGGATATTGTCCGAAAAATGCGAGACCAGCGCGCCAT GATGGTGCAGACATCAAAACATGCCAAAGGCCAGGATTTGTTTGATCAGATTGTGTACCACTTGGACCTTGTGGAAACAGATTACTTTGG CCTCCAGTTCCTCGACTCTGCCCAGGTTGCGCACTGGCTGGATCATGCCAAACCCATAAAAAAGCAGATGAAAATTGGACCTGCTTATGC TTTACACTTTCGAGTTAAATACTATTCTTCAGAACCAAACAACCTTCGTGAGGAGTTTACAAGGTACCTGTTTGTTTTACAACTCAGGCA TGACATTCTTTCTGGAAAATTGAAATGCCCTTATGAAACAGCTGTGGAATTAGCTGCTCTCTGTCTACAAGCGGAGCTTGGGGAGTGCGA GCTTCCAGAACACACACCAGAGCTTGTGTCTGAGTTTCGGTTCATTCCAAATCAGACAGAAGCAATGGAATTTGATATCTTCCAGAGATG GAAAGAGTGCAGGGGAAAGAGCCCTGCCCAGGCGGAACTCTCCTATCTGAATAAAGCGAAGTGGCTGGAAATGTATGGGGTAGACATGCA CGTTGTCAGGGGAAGAGATGGCTGTGAATATTCTCTTGGACTGACCCCGACAGGCATATTAATCTTTGAAGGAGCTAACAAAATAGGCTT ATTCTTTTGGCCTAAAATTACCAAAATGGATTTTAAAAAGAGCAAATTGACACTCGTGGTGGTCGAGGATGATGATCAGGGACGTGAGCA AGAGCACACGTTTGTGTTCCGGTTAGACAGTGCCAGGACCTGCAAACACCTTTGGAAGTGTGCAGTTGAGCACCACGCATTCTTCCGACT GCGGACGCCAGGAAACAGCAAATCCAATAGATCCGACTTTATCAGGCTGGGCTCTCGCTTCAGATTCAGTGGGCGGACAGAATATCAAGC TACACATGGCTCCAGGTTACGAAGAACCAGCACCTTTGAGAGGAAGCCTAGTAAACGTTATCCATCCCGGAGACATTCAACGTTCAAAGC AAGCAACCCAGTGATAGCAGCCCAGCTCTGCTCTAAAACAAATCCAGAAGTCCATAATTACCAGCCTCAATATCATCCTAATATCCATCC CAGCCAGCCCCGGTGGCATCCTCACTCTCCAAATGTCAGGCCATCCTTTCAGGATGACAGGTCGCATTGGAAAGCATCGGCCAGTGGAGA TGACAGCCATTTTGATTATGTCCACGACCAGAACCAGAAGAACTTAGGAGGGATGCAAAGTATGATGTATCGAGATAAACTCATGACTGC ACTTTGAGAGACTGAAGCATCTCTCTTCCATTCACCTTCATAGTTTCATTGCATTCCATGAAAAGTGTCTTGGCCTCAGATGGATGGATG TGTTTGGACGAGTGTCTTTAAGGAGTAGTCCTGAAAGGTGTTTTTGGTGTCCATGTAAATATTTGAAGATAAAACCACTATAGCTTGTCA TAATTTACTGTTGACTGCATTCTCATTAAAATGAAGGTAAAGGCTCAGGAATCATATTGATGTTCTGATTTTAAAATTGGAGTCAAAGTC TATGTTTATCATTTTACTATGTTCCTGATGTTCTTTGTTATTTAATTAATGGGAGCAAATAAAACCAGAAGAGCTTGGGAAGATTGCTCA GCATATATTCCTGTCGTAGAAGTTGAGATTGCTAGGGTCCAGTTTCCCTAGTGTGGCCTGGACGAGTCATTTCCCCTTCATTGACCTCAT TTTCCCCATCTGAAAAGAGAGGGTTGGACTAAGTGATCTCCAAGGTCCTTTCCAACTCTAAAATTCTGCAATTTGTTAACATTTCATTTT GTTTAGGTTGAGGACATACATTCAAACTAATTTTATCACAAGGAAAACTGCAATACCCACTTCCTTGACAGAGTTACTCCTTTCAGAAGC TAAATAAAGTATATAACTTATTAGATGTTATATAGATACAGGGGGACTTTGAATTTCACATCTTAAAGCAGTTGAGCTACTTTGAATTTA AGCAGTCGTACTAATCTTAAATTGCATAGCATTTGTTTTGATCGAATTTGCTGCTCAAGTATGGGAATAATTTTTAATGTCTTAATGATT GGTGCTGCTAACTTGCGTGATTTCAGAAGACATAATTGTGAATACACACTGTCAGAATTGGGGGATTGGTTTTTACCCTAGACTTCACTC TTAAAAAGCAACGTGCAATCAAGATCATTTATGGCTCAAATGAAAGCATATAAGGTTTTCTTGAAGTTGTGCCAAAGCATTCTGTAGAGT AGGATGAGATGGTTGTTGCCCTAGTCTGTTGGTAGAACCAGAAATCAATATGTTGTCTTTTAGGTTAAAGCTTGTACCAAAATATTTATT TCCCCCATTTCAAGCCCTGAGTCAAACATTTTTTTCTCTTAATAATAGACCTGAAATGTTTTATTAGTATTTCTGTGAAATCAGTTGATT CTTGTGCCATTTTTGTATATGTAATTGTAATTTTGCCCATGTTAGGCCCTCTAAAAAATGTTTGACATCCTTTGAGATATTTTATTACTA AAATCTGATCTTTTTTGGCTACTGCAAAAATCTATTCAGCAAGAAGGTATCAGCTGCATACCTTGCACAGTGGAGCTGACTACCTATAAA CTCTCCCTAAGGCATTTGTTTACAGGTGTATTCCATTTTAGCAGACGTTCTGATGCTCAGTGTATGTGCTGCATACAAATAAATGTGTTC TGAATCTTTTCATCTTATTGATAGCATTTTTACAAATGTGTTTCCAAGGAATAAAGATTATTCTTGCTTTTTTTTTGACTCCATCTTCAT TTTTTTTAAATTGATTCTTGTTGCTATGCAGAAGTCTCATTTGTGAATGACCTTGGTAACAGAACAGTTGGCTTTTGGAAGTCTGAAGGT GAGCATTCAGTTAGGTGGGTGGAGCAAGATCATCCTAGAATGAGGCTGCTCTTGGCAAGAGTGGATCTTATAGGCACAGCAGCTGATGCC TTTCTTCATCTGGGGCAACTCTGGTGAAGGTTGTCCTGCCTGTCACAGGTGCTGAGTAGAGAGAAGTGGTGGCAGTGGGATTTCCTCAGT AATAGTCCTGTAAAGGTACGTGTTTGTCCTGGCTACTTGTGCTCTTCCTGGCAGGAAGGCATCCAAACCCTTATCTGTGGGCTCCTGGAA >In-frame_ENST00000394827_ENST00000374557_TCGA-4H-AAAK-01A_PTPN3_chr9_112143932_-_EPB41L4B_chr9_112042201_length(amino acids)=855AA_start in transcript=229_stop in transcript=2796 MTQKSSSSVSPSSNAPGSCSPDGVDQQLLDDFHRVTKGGSTEDASQYYCDKNDNGDSYLVLIRITPDEDGKFGFNLKGGVDQKMPLVVSR INPESPADTCIPKLNEGDQIVLINGRDISEHTHDQVVMFIKASRESHSRELALVIRRRAVRSFADFKSEDELNQLFPEAIFPMCPEGGDT LEGSMAQLKKGLESGTVLIQFEQLYRKKPGLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQGNEDYINASYVNMEIPAANLVNKYIATQG PLPHTCAQFWQVVWDQKLSLIVMLTTLTERGRTKCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAW PDHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPLDIVRKMRDQRAMMVQTSKHAKGQDLFDQ IVYHLDLVETDYFGLQFLDSAQVAHWLDHAKPIKKQMKIGPAYALHFRVKYYSSEPNNLREEFTRYLFVLQLRHDILSGKLKCPYETAVE LAALCLQAELGECELPEHTPELVSEFRFIPNQTEAMEFDIFQRWKECRGKSPAQAELSYLNKAKWLEMYGVDMHVVRGRDGCEYSLGLTP TGILIFEGANKIGLFFWPKITKMDFKKSKLTLVVVEDDDQGREQEHTFVFRLDSARTCKHLWKCAVEHHAFFRLRTPGNSKSNRSDFIRL GSRFRFSGRTEYQATHGSRLRRTSTFERKPSKRYPSRRHSTFKASNPVIAAQLCSKTNPEVHNYQPQYHPNIHPSQPRWHPHSPNVRPSF -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for PTPN3-EPB41L4B |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for PTPN3-EPB41L4B |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for PTPN3-EPB41L4B |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | PTPN3 | C0206698 | Cholangiocarcinoma | 1 | ORPHANET |
Hgene | PTPN3 | C0740277 | Bile duct carcinoma | 1 | ORPHANET |
Hgene | PTPN3 | C1135196 | Heart Failure, Diastolic | 1 | CTD_human |