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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:PTPRK-SMNDC1 (FusionGDB2 ID:70024) |
Fusion Gene Summary for PTPRK-SMNDC1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: PTPRK-SMNDC1 | Fusion gene ID: 70024 | Hgene | Tgene | Gene symbol | PTPRK | SMNDC1 | Gene ID | 5796 | 10285 |
Gene name | protein tyrosine phosphatase receptor type K | survival motor neuron domain containing 1 | |
Synonyms | R-PTP-kappa | SMNR|SPF30|TDRD16C | |
Cytomap | 6q22.33 | 10q25.2 | |
Type of gene | protein-coding | protein-coding | |
Description | receptor-type tyrosine-protein phosphatase kappadJ480J14.2.1 (protein tyrosine phosphatase, receptor type, K (R-PTP-KAPPA, protein tyrosine phosphatase kappa , protein tyrosine phosphatase kappaprotein-tyrosine phosphatase kappaprotein-tyrosine phospha | survival of motor neuron-related-splicing factor 3030 kDa splicing factor SMNrpSMN-related proteinsplicing factor 30, survival of motor neuron-relatedsurvival motor neuron domain-containing protein 1tudor domain containing 16C | |
Modification date | 20200322 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000368226, ENST00000368227, ENST00000532331, ENST00000368213, ENST00000368210, ENST00000368215, ENST00000368207, ENST00000524481, ENST00000525459, | ENST00000369603, ENST00000369592, ENST00000471297, | |
Fusion gene scores | * DoF score | 36 X 18 X 16=10368 | 4 X 5 X 2=40 |
# samples | 48 | 5 | |
** MAII score | log2(48/10368*10)=-4.43295940727611 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/40*10)=0.321928094887362 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: PTPRK [Title/Abstract] AND SMNDC1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | PTPRK(128561180)-SMNDC1(112058548), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | PTPRK | GO:0006470 | protein dephosphorylation | 16263724 |
Hgene | PTPRK | GO:0007165 | signal transduction | 16849327 |
Hgene | PTPRK | GO:0007179 | transforming growth factor beta receptor signaling pathway | 15899872 |
Hgene | PTPRK | GO:0008285 | negative regulation of cell proliferation | 15899872|18276111 |
Hgene | PTPRK | GO:0010839 | negative regulation of keratinocyte proliferation | 16263724 |
Hgene | PTPRK | GO:0030336 | negative regulation of cell migration | 18276111 |
Hgene | PTPRK | GO:0034394 | protein localization to cell surface | 18276111 |
Hgene | PTPRK | GO:0034614 | cellular response to reactive oxygen species | 16849327 |
Hgene | PTPRK | GO:0034644 | cellular response to UV | 16849327 |
Hgene | PTPRK | GO:0045786 | negative regulation of cell cycle | 15899872 |
Hgene | PTPRK | GO:0045892 | negative regulation of transcription, DNA-templated | 18276111 |
Fusion gene breakpoints across PTPRK (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across SMNDC1 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | CHOL | TCGA-ZH-A8Y1-01A | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
ChimerDB4 | CHOL | TCGA-ZH-A8Y1 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
ChimerDB4 | CHOL | TCGA-ZH-A8Y1-01A | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
ChimerDB4 | CHOL | TCGA-ZH-A8Y1-01A | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
ChimerDB4 | CHOL | TCGA-ZH-A8Y1-01A | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
Top |
Fusion Gene ORF analysis for PTPRK-SMNDC1 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000368226 | ENST00000369603 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368226 | ENST00000369592 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
5CDS-5UTR | ENST00000368226 | ENST00000471297 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368227 | ENST00000369603 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368227 | ENST00000369592 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
5CDS-5UTR | ENST00000368227 | ENST00000471297 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000532331 | ENST00000369603 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000532331 | ENST00000369592 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
5CDS-5UTR | ENST00000532331 | ENST00000471297 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368213 | ENST00000369603 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368213 | ENST00000369592 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
5CDS-5UTR | ENST00000368213 | ENST00000471297 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368210 | ENST00000369603 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368210 | ENST00000369592 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
5CDS-5UTR | ENST00000368210 | ENST00000471297 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368215 | ENST00000369603 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368215 | ENST00000369592 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
5CDS-5UTR | ENST00000368215 | ENST00000471297 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368207 | ENST00000369603 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368207 | ENST00000369592 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
5CDS-5UTR | ENST00000368207 | ENST00000471297 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
5UTR-3CDS | ENST00000524481 | ENST00000369603 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
5UTR-3CDS | ENST00000524481 | ENST00000369592 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
5UTR-5UTR | ENST00000524481 | ENST00000471297 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
intron-3CDS | ENST00000525459 | ENST00000369603 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
intron-3CDS | ENST00000525459 | ENST00000369592 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
intron-5UTR | ENST00000525459 | ENST00000471297 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368226 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368226 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
5CDS-5UTR | ENST00000368226 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368227 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368227 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
5CDS-5UTR | ENST00000368227 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000532331 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000532331 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
5CDS-5UTR | ENST00000532331 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368213 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368213 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
5CDS-5UTR | ENST00000368213 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368210 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368210 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
5CDS-5UTR | ENST00000368210 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368215 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368215 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
5CDS-5UTR | ENST00000368215 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368207 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368207 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
5CDS-5UTR | ENST00000368207 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
5UTR-3CDS | ENST00000524481 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
5UTR-3CDS | ENST00000524481 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
5UTR-5UTR | ENST00000524481 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
intron-3CDS | ENST00000525459 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
intron-3CDS | ENST00000525459 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
intron-5UTR | ENST00000525459 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - |
In-frame | ENST00000368226 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
In-frame | ENST00000368226 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
5CDS-5UTR | ENST00000368226 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
In-frame | ENST00000368227 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
In-frame | ENST00000368227 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
5CDS-5UTR | ENST00000368227 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
In-frame | ENST00000532331 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
In-frame | ENST00000532331 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
5CDS-5UTR | ENST00000532331 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
In-frame | ENST00000368213 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
In-frame | ENST00000368213 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
5CDS-5UTR | ENST00000368213 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
In-frame | ENST00000368210 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
In-frame | ENST00000368210 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
5CDS-5UTR | ENST00000368210 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
In-frame | ENST00000368215 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
In-frame | ENST00000368215 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
5CDS-5UTR | ENST00000368215 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
In-frame | ENST00000368207 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
In-frame | ENST00000368207 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
5CDS-5UTR | ENST00000368207 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
5UTR-3CDS | ENST00000524481 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
5UTR-3CDS | ENST00000524481 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
5UTR-5UTR | ENST00000524481 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
intron-3CDS | ENST00000525459 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
intron-3CDS | ENST00000525459 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
intron-5UTR | ENST00000525459 | ENST00000471297 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000368226 | PTPRK | chr6 | 128561180 | - | ENST00000369603 | SMNDC1 | chr10 | 112058548 | - | 5026 | 1009 | 109 | 1605 | 498 |
ENST00000368226 | PTPRK | chr6 | 128561180 | - | ENST00000369592 | SMNDC1 | chr10 | 112058548 | - | 1694 | 1009 | 109 | 1605 | 498 |
ENST00000368227 | PTPRK | chr6 | 128561180 | - | ENST00000369603 | SMNDC1 | chr10 | 112058548 | - | 5077 | 1060 | 160 | 1656 | 498 |
ENST00000368227 | PTPRK | chr6 | 128561180 | - | ENST00000369592 | SMNDC1 | chr10 | 112058548 | - | 1745 | 1060 | 160 | 1656 | 498 |
ENST00000532331 | PTPRK | chr6 | 128561180 | - | ENST00000369603 | SMNDC1 | chr10 | 112058548 | - | 4828 | 811 | 91 | 1407 | 438 |
ENST00000532331 | PTPRK | chr6 | 128561180 | - | ENST00000369592 | SMNDC1 | chr10 | 112058548 | - | 1496 | 811 | 91 | 1407 | 438 |
ENST00000368213 | PTPRK | chr6 | 128561180 | - | ENST00000369603 | SMNDC1 | chr10 | 112058548 | - | 4935 | 918 | 18 | 1514 | 498 |
ENST00000368213 | PTPRK | chr6 | 128561180 | - | ENST00000369592 | SMNDC1 | chr10 | 112058548 | - | 1603 | 918 | 18 | 1514 | 498 |
ENST00000368210 | PTPRK | chr6 | 128561180 | - | ENST00000369603 | SMNDC1 | chr10 | 112058548 | - | 4968 | 951 | 51 | 1547 | 498 |
ENST00000368210 | PTPRK | chr6 | 128561180 | - | ENST00000369592 | SMNDC1 | chr10 | 112058548 | - | 1636 | 951 | 51 | 1547 | 498 |
ENST00000368215 | PTPRK | chr6 | 128561180 | - | ENST00000369603 | SMNDC1 | chr10 | 112058548 | - | 4710 | 693 | 0 | 1289 | 429 |
ENST00000368215 | PTPRK | chr6 | 128561180 | - | ENST00000369592 | SMNDC1 | chr10 | 112058548 | - | 1378 | 693 | 0 | 1289 | 429 |
ENST00000368207 | PTPRK | chr6 | 128561180 | - | ENST00000369603 | SMNDC1 | chr10 | 112058548 | - | 4935 | 918 | 18 | 1514 | 498 |
ENST00000368207 | PTPRK | chr6 | 128561180 | - | ENST00000369592 | SMNDC1 | chr10 | 112058548 | - | 1603 | 918 | 18 | 1514 | 498 |
ENST00000368226 | PTPRK | chr6 | 128561179 | - | ENST00000369603 | SMNDC1 | chr10 | 112058548 | - | 5026 | 1009 | 109 | 1605 | 498 |
ENST00000368226 | PTPRK | chr6 | 128561179 | - | ENST00000369592 | SMNDC1 | chr10 | 112058548 | - | 1694 | 1009 | 109 | 1605 | 498 |
ENST00000368227 | PTPRK | chr6 | 128561179 | - | ENST00000369603 | SMNDC1 | chr10 | 112058548 | - | 5077 | 1060 | 160 | 1656 | 498 |
ENST00000368227 | PTPRK | chr6 | 128561179 | - | ENST00000369592 | SMNDC1 | chr10 | 112058548 | - | 1745 | 1060 | 160 | 1656 | 498 |
ENST00000532331 | PTPRK | chr6 | 128561179 | - | ENST00000369603 | SMNDC1 | chr10 | 112058548 | - | 4828 | 811 | 91 | 1407 | 438 |
ENST00000532331 | PTPRK | chr6 | 128561179 | - | ENST00000369592 | SMNDC1 | chr10 | 112058548 | - | 1496 | 811 | 91 | 1407 | 438 |
ENST00000368213 | PTPRK | chr6 | 128561179 | - | ENST00000369603 | SMNDC1 | chr10 | 112058548 | - | 4935 | 918 | 18 | 1514 | 498 |
ENST00000368213 | PTPRK | chr6 | 128561179 | - | ENST00000369592 | SMNDC1 | chr10 | 112058548 | - | 1603 | 918 | 18 | 1514 | 498 |
ENST00000368210 | PTPRK | chr6 | 128561179 | - | ENST00000369603 | SMNDC1 | chr10 | 112058548 | - | 4968 | 951 | 51 | 1547 | 498 |
ENST00000368210 | PTPRK | chr6 | 128561179 | - | ENST00000369592 | SMNDC1 | chr10 | 112058548 | - | 1636 | 951 | 51 | 1547 | 498 |
ENST00000368215 | PTPRK | chr6 | 128561179 | - | ENST00000369603 | SMNDC1 | chr10 | 112058548 | - | 4710 | 693 | 0 | 1289 | 429 |
ENST00000368215 | PTPRK | chr6 | 128561179 | - | ENST00000369592 | SMNDC1 | chr10 | 112058548 | - | 1378 | 693 | 0 | 1289 | 429 |
ENST00000368207 | PTPRK | chr6 | 128561179 | - | ENST00000369603 | SMNDC1 | chr10 | 112058548 | - | 4935 | 918 | 18 | 1514 | 498 |
ENST00000368207 | PTPRK | chr6 | 128561179 | - | ENST00000369592 | SMNDC1 | chr10 | 112058548 | - | 1603 | 918 | 18 | 1514 | 498 |
ENST00000368226 | PTPRK | chr6 | 128561179 | - | ENST00000369603 | SMNDC1 | chr10 | 112058547 | - | 5026 | 1009 | 109 | 1605 | 498 |
ENST00000368226 | PTPRK | chr6 | 128561179 | - | ENST00000369592 | SMNDC1 | chr10 | 112058547 | - | 1694 | 1009 | 109 | 1605 | 498 |
ENST00000368227 | PTPRK | chr6 | 128561179 | - | ENST00000369603 | SMNDC1 | chr10 | 112058547 | - | 5077 | 1060 | 160 | 1656 | 498 |
ENST00000368227 | PTPRK | chr6 | 128561179 | - | ENST00000369592 | SMNDC1 | chr10 | 112058547 | - | 1745 | 1060 | 160 | 1656 | 498 |
ENST00000532331 | PTPRK | chr6 | 128561179 | - | ENST00000369603 | SMNDC1 | chr10 | 112058547 | - | 4828 | 811 | 91 | 1407 | 438 |
ENST00000532331 | PTPRK | chr6 | 128561179 | - | ENST00000369592 | SMNDC1 | chr10 | 112058547 | - | 1496 | 811 | 91 | 1407 | 438 |
ENST00000368213 | PTPRK | chr6 | 128561179 | - | ENST00000369603 | SMNDC1 | chr10 | 112058547 | - | 4935 | 918 | 18 | 1514 | 498 |
ENST00000368213 | PTPRK | chr6 | 128561179 | - | ENST00000369592 | SMNDC1 | chr10 | 112058547 | - | 1603 | 918 | 18 | 1514 | 498 |
ENST00000368210 | PTPRK | chr6 | 128561179 | - | ENST00000369603 | SMNDC1 | chr10 | 112058547 | - | 4968 | 951 | 51 | 1547 | 498 |
ENST00000368210 | PTPRK | chr6 | 128561179 | - | ENST00000369592 | SMNDC1 | chr10 | 112058547 | - | 1636 | 951 | 51 | 1547 | 498 |
ENST00000368215 | PTPRK | chr6 | 128561179 | - | ENST00000369603 | SMNDC1 | chr10 | 112058547 | - | 4710 | 693 | 0 | 1289 | 429 |
ENST00000368215 | PTPRK | chr6 | 128561179 | - | ENST00000369592 | SMNDC1 | chr10 | 112058547 | - | 1378 | 693 | 0 | 1289 | 429 |
ENST00000368207 | PTPRK | chr6 | 128561179 | - | ENST00000369603 | SMNDC1 | chr10 | 112058547 | - | 4935 | 918 | 18 | 1514 | 498 |
ENST00000368207 | PTPRK | chr6 | 128561179 | - | ENST00000369592 | SMNDC1 | chr10 | 112058547 | - | 1603 | 918 | 18 | 1514 | 498 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000368226 | ENST00000369603 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - | 8.55E-05 | 0.9999145 |
ENST00000368226 | ENST00000369592 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - | 0.001153463 | 0.99884653 |
ENST00000368227 | ENST00000369603 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - | 8.85E-05 | 0.99991155 |
ENST00000368227 | ENST00000369592 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - | 0.001268524 | 0.99873143 |
ENST00000532331 | ENST00000369603 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - | 7.68E-05 | 0.9999232 |
ENST00000532331 | ENST00000369592 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - | 0.00087948 | 0.99912053 |
ENST00000368213 | ENST00000369603 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - | 8.10E-05 | 0.99991894 |
ENST00000368213 | ENST00000369592 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - | 0.000923823 | 0.9990761 |
ENST00000368210 | ENST00000369603 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - | 8.36E-05 | 0.9999163 |
ENST00000368210 | ENST00000369592 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - | 0.000976567 | 0.99902344 |
ENST00000368215 | ENST00000369603 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - | 7.08E-05 | 0.9999292 |
ENST00000368215 | ENST00000369592 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - | 0.000877168 | 0.9991228 |
ENST00000368207 | ENST00000369603 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - | 8.10E-05 | 0.99991894 |
ENST00000368207 | ENST00000369592 | PTPRK | chr6 | 128561180 | - | SMNDC1 | chr10 | 112058548 | - | 0.000923823 | 0.9990761 |
ENST00000368226 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - | 8.55E-05 | 0.9999145 |
ENST00000368226 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - | 0.001153463 | 0.99884653 |
ENST00000368227 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - | 8.85E-05 | 0.99991155 |
ENST00000368227 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - | 0.001268524 | 0.99873143 |
ENST00000532331 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - | 7.68E-05 | 0.9999232 |
ENST00000532331 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - | 0.00087948 | 0.99912053 |
ENST00000368213 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - | 8.10E-05 | 0.99991894 |
ENST00000368213 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - | 0.000923823 | 0.9990761 |
ENST00000368210 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - | 8.36E-05 | 0.9999163 |
ENST00000368210 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - | 0.000976567 | 0.99902344 |
ENST00000368215 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - | 7.08E-05 | 0.9999292 |
ENST00000368215 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - | 0.000877168 | 0.9991228 |
ENST00000368207 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - | 8.10E-05 | 0.99991894 |
ENST00000368207 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058548 | - | 0.000923823 | 0.9990761 |
ENST00000368226 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - | 8.55E-05 | 0.9999145 |
ENST00000368226 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - | 0.001153463 | 0.99884653 |
ENST00000368227 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - | 8.85E-05 | 0.99991155 |
ENST00000368227 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - | 0.001268524 | 0.99873143 |
ENST00000532331 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - | 7.68E-05 | 0.9999232 |
ENST00000532331 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - | 0.00087948 | 0.99912053 |
ENST00000368213 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - | 8.10E-05 | 0.99991894 |
ENST00000368213 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - | 0.000923823 | 0.9990761 |
ENST00000368210 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - | 8.36E-05 | 0.9999163 |
ENST00000368210 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - | 0.000976567 | 0.99902344 |
ENST00000368215 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - | 7.08E-05 | 0.9999292 |
ENST00000368215 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - | 0.000877168 | 0.9991228 |
ENST00000368207 | ENST00000369603 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - | 8.10E-05 | 0.99991894 |
ENST00000368207 | ENST00000369592 | PTPRK | chr6 | 128561179 | - | SMNDC1 | chr10 | 112058547 | - | 0.000923823 | 0.9990761 |
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Fusion Genomic Features for PTPRK-SMNDC1 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for PTPRK-SMNDC1 |
Go to FGviewer for the breakpoints of chr6:128561180-chr10:112058548 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368213 | - | 5 | 31 | 31_194 | 231.0 | 1447.0 | Domain | MAM |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368215 | - | 5 | 30 | 31_194 | 231.0 | 1440.0 | Domain | MAM |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368226 | - | 5 | 30 | 31_194 | 231.0 | 1441.0 | Domain | MAM |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 31_194 | 231.0 | 1447.0 | Domain | MAM |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 31_194 | 231.0 | 1440.0 | Domain | MAM |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 31_194 | 231.0 | 1441.0 | Domain | MAM |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 31_194 | 231.0 | 1447.0 | Domain | MAM |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 31_194 | 231.0 | 1440.0 | Domain | MAM |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 31_194 | 231.0 | 1441.0 | Domain | MAM |
Tgene | SMNDC1 | chr6:128561179 | chr10:112058547 | ENST00000369592 | 1 | 6 | 72_132 | 40.0 | 239.0 | Domain | Tudor | |
Tgene | SMNDC1 | chr6:128561179 | chr10:112058547 | ENST00000369603 | 1 | 6 | 72_132 | 40.0 | 239.0 | Domain | Tudor | |
Tgene | SMNDC1 | chr6:128561179 | chr10:112058548 | ENST00000369592 | 1 | 6 | 72_132 | 40.0 | 239.0 | Domain | Tudor | |
Tgene | SMNDC1 | chr6:128561179 | chr10:112058548 | ENST00000369603 | 1 | 6 | 72_132 | 40.0 | 239.0 | Domain | Tudor | |
Tgene | SMNDC1 | chr6:128561180 | chr10:112058548 | ENST00000369592 | 1 | 6 | 72_132 | 40.0 | 239.0 | Domain | Tudor | |
Tgene | SMNDC1 | chr6:128561180 | chr10:112058548 | ENST00000369603 | 1 | 6 | 72_132 | 40.0 | 239.0 | Domain | Tudor | |
Tgene | SMNDC1 | chr6:128561179 | chr10:112058547 | ENST00000369592 | 1 | 6 | 142_160 | 40.0 | 239.0 | Motif | Nuclear localization signal | |
Tgene | SMNDC1 | chr6:128561179 | chr10:112058547 | ENST00000369603 | 1 | 6 | 142_160 | 40.0 | 239.0 | Motif | Nuclear localization signal | |
Tgene | SMNDC1 | chr6:128561179 | chr10:112058548 | ENST00000369592 | 1 | 6 | 142_160 | 40.0 | 239.0 | Motif | Nuclear localization signal | |
Tgene | SMNDC1 | chr6:128561179 | chr10:112058548 | ENST00000369603 | 1 | 6 | 142_160 | 40.0 | 239.0 | Motif | Nuclear localization signal | |
Tgene | SMNDC1 | chr6:128561180 | chr10:112058548 | ENST00000369592 | 1 | 6 | 142_160 | 40.0 | 239.0 | Motif | Nuclear localization signal | |
Tgene | SMNDC1 | chr6:128561180 | chr10:112058548 | ENST00000369603 | 1 | 6 | 142_160 | 40.0 | 239.0 | Motif | Nuclear localization signal |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368213 | - | 5 | 31 | 1173_1435 | 231.0 | 1447.0 | Domain | Tyrosine-protein phosphatase 2 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368213 | - | 5 | 31 | 196_281 | 231.0 | 1447.0 | Domain | Note=Ig-like C2-type |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368213 | - | 5 | 31 | 294_389 | 231.0 | 1447.0 | Domain | Fibronectin type-III 1 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368213 | - | 5 | 31 | 392_488 | 231.0 | 1447.0 | Domain | Fibronectin type-III 2 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368213 | - | 5 | 31 | 491_595 | 231.0 | 1447.0 | Domain | Fibronectin type-III 3 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368213 | - | 5 | 31 | 597_680 | 231.0 | 1447.0 | Domain | Fibronectin type-III 4 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368213 | - | 5 | 31 | 887_1141 | 231.0 | 1447.0 | Domain | Tyrosine-protein phosphatase 1 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368215 | - | 5 | 30 | 1173_1435 | 231.0 | 1440.0 | Domain | Tyrosine-protein phosphatase 2 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368215 | - | 5 | 30 | 196_281 | 231.0 | 1440.0 | Domain | Note=Ig-like C2-type |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368215 | - | 5 | 30 | 294_389 | 231.0 | 1440.0 | Domain | Fibronectin type-III 1 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368215 | - | 5 | 30 | 392_488 | 231.0 | 1440.0 | Domain | Fibronectin type-III 2 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368215 | - | 5 | 30 | 491_595 | 231.0 | 1440.0 | Domain | Fibronectin type-III 3 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368215 | - | 5 | 30 | 597_680 | 231.0 | 1440.0 | Domain | Fibronectin type-III 4 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368215 | - | 5 | 30 | 887_1141 | 231.0 | 1440.0 | Domain | Tyrosine-protein phosphatase 1 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368226 | - | 5 | 30 | 1173_1435 | 231.0 | 1441.0 | Domain | Tyrosine-protein phosphatase 2 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368226 | - | 5 | 30 | 196_281 | 231.0 | 1441.0 | Domain | Note=Ig-like C2-type |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368226 | - | 5 | 30 | 294_389 | 231.0 | 1441.0 | Domain | Fibronectin type-III 1 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368226 | - | 5 | 30 | 392_488 | 231.0 | 1441.0 | Domain | Fibronectin type-III 2 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368226 | - | 5 | 30 | 491_595 | 231.0 | 1441.0 | Domain | Fibronectin type-III 3 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368226 | - | 5 | 30 | 597_680 | 231.0 | 1441.0 | Domain | Fibronectin type-III 4 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368226 | - | 5 | 30 | 887_1141 | 231.0 | 1441.0 | Domain | Tyrosine-protein phosphatase 1 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 1173_1435 | 231.0 | 1447.0 | Domain | Tyrosine-protein phosphatase 2 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 196_281 | 231.0 | 1447.0 | Domain | Note=Ig-like C2-type |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 294_389 | 231.0 | 1447.0 | Domain | Fibronectin type-III 1 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 392_488 | 231.0 | 1447.0 | Domain | Fibronectin type-III 2 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 491_595 | 231.0 | 1447.0 | Domain | Fibronectin type-III 3 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 597_680 | 231.0 | 1447.0 | Domain | Fibronectin type-III 4 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 887_1141 | 231.0 | 1447.0 | Domain | Tyrosine-protein phosphatase 1 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 1173_1435 | 231.0 | 1440.0 | Domain | Tyrosine-protein phosphatase 2 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 196_281 | 231.0 | 1440.0 | Domain | Note=Ig-like C2-type |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 294_389 | 231.0 | 1440.0 | Domain | Fibronectin type-III 1 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 392_488 | 231.0 | 1440.0 | Domain | Fibronectin type-III 2 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 491_595 | 231.0 | 1440.0 | Domain | Fibronectin type-III 3 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 597_680 | 231.0 | 1440.0 | Domain | Fibronectin type-III 4 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 887_1141 | 231.0 | 1440.0 | Domain | Tyrosine-protein phosphatase 1 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 1173_1435 | 231.0 | 1441.0 | Domain | Tyrosine-protein phosphatase 2 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 196_281 | 231.0 | 1441.0 | Domain | Note=Ig-like C2-type |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 294_389 | 231.0 | 1441.0 | Domain | Fibronectin type-III 1 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 392_488 | 231.0 | 1441.0 | Domain | Fibronectin type-III 2 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 491_595 | 231.0 | 1441.0 | Domain | Fibronectin type-III 3 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 597_680 | 231.0 | 1441.0 | Domain | Fibronectin type-III 4 |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 887_1141 | 231.0 | 1441.0 | Domain | Tyrosine-protein phosphatase 1 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 1173_1435 | 231.0 | 1447.0 | Domain | Tyrosine-protein phosphatase 2 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 196_281 | 231.0 | 1447.0 | Domain | Note=Ig-like C2-type |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 294_389 | 231.0 | 1447.0 | Domain | Fibronectin type-III 1 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 392_488 | 231.0 | 1447.0 | Domain | Fibronectin type-III 2 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 491_595 | 231.0 | 1447.0 | Domain | Fibronectin type-III 3 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 597_680 | 231.0 | 1447.0 | Domain | Fibronectin type-III 4 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 887_1141 | 231.0 | 1447.0 | Domain | Tyrosine-protein phosphatase 1 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 1173_1435 | 231.0 | 1440.0 | Domain | Tyrosine-protein phosphatase 2 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 196_281 | 231.0 | 1440.0 | Domain | Note=Ig-like C2-type |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 294_389 | 231.0 | 1440.0 | Domain | Fibronectin type-III 1 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 392_488 | 231.0 | 1440.0 | Domain | Fibronectin type-III 2 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 491_595 | 231.0 | 1440.0 | Domain | Fibronectin type-III 3 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 597_680 | 231.0 | 1440.0 | Domain | Fibronectin type-III 4 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 887_1141 | 231.0 | 1440.0 | Domain | Tyrosine-protein phosphatase 1 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 1173_1435 | 231.0 | 1441.0 | Domain | Tyrosine-protein phosphatase 2 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 196_281 | 231.0 | 1441.0 | Domain | Note=Ig-like C2-type |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 294_389 | 231.0 | 1441.0 | Domain | Fibronectin type-III 1 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 392_488 | 231.0 | 1441.0 | Domain | Fibronectin type-III 2 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 491_595 | 231.0 | 1441.0 | Domain | Fibronectin type-III 3 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 597_680 | 231.0 | 1441.0 | Domain | Fibronectin type-III 4 |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 887_1141 | 231.0 | 1441.0 | Domain | Tyrosine-protein phosphatase 1 |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368213 | - | 5 | 31 | 1082_1088 | 231.0 | 1447.0 | Region | Substrate binding |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368215 | - | 5 | 30 | 1082_1088 | 231.0 | 1440.0 | Region | Substrate binding |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368226 | - | 5 | 30 | 1082_1088 | 231.0 | 1441.0 | Region | Substrate binding |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 1082_1088 | 231.0 | 1447.0 | Region | Substrate binding |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 1082_1088 | 231.0 | 1440.0 | Region | Substrate binding |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 1082_1088 | 231.0 | 1441.0 | Region | Substrate binding |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 1082_1088 | 231.0 | 1447.0 | Region | Substrate binding |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 1082_1088 | 231.0 | 1440.0 | Region | Substrate binding |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 1082_1088 | 231.0 | 1441.0 | Region | Substrate binding |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368213 | - | 5 | 31 | 27_752 | 231.0 | 1447.0 | Topological domain | Extracellular |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368213 | - | 5 | 31 | 775_1439 | 231.0 | 1447.0 | Topological domain | Cytoplasmic |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368215 | - | 5 | 30 | 27_752 | 231.0 | 1440.0 | Topological domain | Extracellular |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368215 | - | 5 | 30 | 775_1439 | 231.0 | 1440.0 | Topological domain | Cytoplasmic |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368226 | - | 5 | 30 | 27_752 | 231.0 | 1441.0 | Topological domain | Extracellular |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368226 | - | 5 | 30 | 775_1439 | 231.0 | 1441.0 | Topological domain | Cytoplasmic |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 27_752 | 231.0 | 1447.0 | Topological domain | Extracellular |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 775_1439 | 231.0 | 1447.0 | Topological domain | Cytoplasmic |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 27_752 | 231.0 | 1440.0 | Topological domain | Extracellular |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 775_1439 | 231.0 | 1440.0 | Topological domain | Cytoplasmic |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 27_752 | 231.0 | 1441.0 | Topological domain | Extracellular |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 775_1439 | 231.0 | 1441.0 | Topological domain | Cytoplasmic |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 27_752 | 231.0 | 1447.0 | Topological domain | Extracellular |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 775_1439 | 231.0 | 1447.0 | Topological domain | Cytoplasmic |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 27_752 | 231.0 | 1440.0 | Topological domain | Extracellular |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 775_1439 | 231.0 | 1440.0 | Topological domain | Cytoplasmic |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 27_752 | 231.0 | 1441.0 | Topological domain | Extracellular |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 775_1439 | 231.0 | 1441.0 | Topological domain | Cytoplasmic |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368213 | - | 5 | 31 | 753_774 | 231.0 | 1447.0 | Transmembrane | Helical |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368215 | - | 5 | 30 | 753_774 | 231.0 | 1440.0 | Transmembrane | Helical |
Hgene | PTPRK | chr6:128561179 | chr10:112058547 | ENST00000368226 | - | 5 | 30 | 753_774 | 231.0 | 1441.0 | Transmembrane | Helical |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 753_774 | 231.0 | 1447.0 | Transmembrane | Helical |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 753_774 | 231.0 | 1440.0 | Transmembrane | Helical |
Hgene | PTPRK | chr6:128561179 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 753_774 | 231.0 | 1441.0 | Transmembrane | Helical |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368213 | - | 5 | 31 | 753_774 | 231.0 | 1447.0 | Transmembrane | Helical |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368215 | - | 5 | 30 | 753_774 | 231.0 | 1440.0 | Transmembrane | Helical |
Hgene | PTPRK | chr6:128561180 | chr10:112058548 | ENST00000368226 | - | 5 | 30 | 753_774 | 231.0 | 1441.0 | Transmembrane | Helical |
Top |
Fusion Gene Sequence for PTPRK-SMNDC1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000368226_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(transcript)=5026nt_BP=1009nt AGAAGCGCCCGGAGCCCGCGGGGCGACGTCACCCCCGGCTCCGCCCCCGTCCCTCCCCGAGCAAAGTAACTCTTGACTAACAGGAGCAGC CTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAG GAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCC CCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCT CTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTG TGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGG TTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTG CATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGC CAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCA GGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATC TCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCA TAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTT TGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGAT TGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCC TGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAA GAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAG AGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTG TGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTT GGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATAC CATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTGAAGAAATTGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGT ACCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTTTGTAGATGCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATA TCAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAAGTTGTAACTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAA TTCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAAAGAGATCTTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTC AGTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAGTTTGTTTTGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCA TCTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTCTTAGTTTTATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTT TGTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTTTTCCATTTACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGG AGAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAGATACTATTTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAA TATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATTAATCTGACGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATT TTTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTAAGTGAACATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCA TAGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTTTAGGATGTGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGT GTTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAAGTCTTTAGCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACAC GGCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTTCAGTAAATGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGG CAAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAATGGGTGTTTGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGA ATTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGGTAGGTAGAATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGG AGGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGTAGGACACAAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTG AAGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTGTAACATCTTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAA GAGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTGGTGTCATTGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTAT TAGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACTGTTAACAGTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGA GGACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGACCTTAAAAAAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCT TTGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCTAGTGTCAGGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGG AGACTACCTGTCACAGTGTGATACTGAATTTGAGAAGATGCTCAATGAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAA GCTCTCTATATTCTGAAACAAAATATAAACCTTGACCTTAAAAAGCTTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGA GACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAAATATTGAGTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAA GCTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAACAGTCCTAACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGG TAACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACAGAGCATACTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTA TTACCATTTATTACCTGTGTATTCCCATTTATTACCTGTGTATTCCTCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCA GTTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGAGTATCCGGCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGC AGTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATAGCAATCCACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCA TCCAATTATAACTGTATTATTGAAGTGTTATCAAATTACCAAGGCTGTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTT GTATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAGGTTATAATAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTG TGGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGTATGTTGTTTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAG AACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAAAAATTACCTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGA TGCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAATTGCTTGTTGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTA ATGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCATCAGGTTAACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGAT TGTAATTTTATAATTACAATTTTTATAAGATAAAAAACTACCAGTTGTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTT >In-frame_ENST00000368226_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=109_stop in transcript=1605 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368226_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(transcript)=1694nt_BP=1009nt AGAAGCGCCCGGAGCCCGCGGGGCGACGTCACCCCCGGCTCCGCCCCCGTCCCTCCCCGAGCAAAGTAACTCTTGACTAACAGGAGCAGC CTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAG GAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCC CCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCT CTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTG TGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGG TTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTG CATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGC CAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCA GGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATC TCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCA TAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTT TGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGAT TGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCC TGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAA GAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAG AGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTG TGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTT >In-frame_ENST00000368226_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=109_stop in transcript=1605 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368227_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(transcript)=5077nt_BP=1060nt GTCTCTCCGGCAGGAGGCGGTGGCGGCGCCGCGCCCGAGCCCGCATTCCTCAGAAGCGCCCGGAGCCCGCGGGGCGACGTCACCCCCGGC TCCGCCCCCGTCCCTCCCCGAGCAAAGTAACTCTTGACTAACAGGAGCAGCCTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGG CGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGGAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTC ACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAA ACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCA AGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGT GCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGG AGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACT GAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGA TTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGG TTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGC AGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAA AGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGA CAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCAC CTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAA CAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACT TGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAG TATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATAC CTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTAT CCTTATATTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATACCATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTG AAGAAATTGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGTACCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTT TGTAGATGCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATATCAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAA GTTGTAACTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAATTCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAA AGAGATCTTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTCAGTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAG TTTGTTTTGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCATCTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTC TTAGTTTTATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTTGTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTT TTCCATTTACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGGAGAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAG ATACTATTTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAATATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATT AATCTGACGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATTTTTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTA AGTGAACATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCATAGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTT TAGGATGTGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGTGTTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAA GTCTTTAGCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACACGGCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTT CAGTAAATGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGGCAAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAAT GGGTGTTTGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGAATTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGG TAGGTAGAATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGGAGGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGT AGGACACAAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTGAAGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTG TAACATCTTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAAGAGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTG GTGTCATTGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTATTAGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACT GTTAACAGTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAGGACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGAC CTTAAAAAAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCTTTGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCT AGTGTCAGGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGGAGACTACCTGTCACAGTGTGATACTGAATTTGAGAAGAT GCTCAATGAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAAGCTCTCTATATTCTGAAACAAAATATAAACCTTGACCTT AAAAAGCTTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGAGACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAA ATATTGAGTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAAGCTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAA CAGTCCTAACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGGTAACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACA GAGCATACTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTATTACCATTTATTACCTGTGTATTCCCATTTATTACCTGT GTATTCCTCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCAGTTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGA GTATCCGGCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGCAGTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATA GCAATCCACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCATCCAATTATAACTGTATTATTGAAGTGTTATCAAATTAC CAAGGCTGTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTTGTATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAG GTTATAATAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTGTGGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGT ATGTTGTTTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAGAACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAA AAATTACCTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGATGCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAAT TGCTTGTTGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTAATGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCAT CAGGTTAACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGATTGTAATTTTATAATTACAATTTTTATAAGATAAAAAACT ACCAGTTGTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTTGCTTTAACTTGGGTAGTAACTGAAATATAAAGGAAGAAA >In-frame_ENST00000368227_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=160_stop in transcript=1656 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368227_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(transcript)=1745nt_BP=1060nt GTCTCTCCGGCAGGAGGCGGTGGCGGCGCCGCGCCCGAGCCCGCATTCCTCAGAAGCGCCCGGAGCCCGCGGGGCGACGTCACCCCCGGC TCCGCCCCCGTCCCTCCCCGAGCAAAGTAACTCTTGACTAACAGGAGCAGCCTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGG CGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGGAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTC ACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAA ACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCA AGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGT GCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGG AGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACT GAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGA TTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGG TTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGC AGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAA AGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGA CAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCAC CTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAA CAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACT TGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAG TATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATAC CTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTAT >In-frame_ENST00000368227_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=160_stop in transcript=1656 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000532331_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(transcript)=4828nt_BP=811nt GGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAA GCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTG GCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCT GTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGA CTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCT ATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGT GACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGA AGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCT AGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCA GGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTAC TCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGA AAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAA GGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAA AGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAA AAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACC TATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGG GCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATACCATTGTCGTCATTGGTTG GCTTCAGTAGAATGAAACGTGAAGAAATTGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGTACCACGGTTCCCTCAAAG TTTGTTGAATAAAGCAACTTTTGTAGATGCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATATCAGGCGCCTACTTAACC TATGGTGTGTACTTTTTGTAAGTTGTAACTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAATTCATTGGAACACCAAGG CAAAAACACCAACCTGCTAAAAGAGATCTTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTCAGTTAAGCTTAAAGATAG GTTAATTTGTAAATGGCAAAGTTTGTTTTGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCATCTCTAAAATTGATCTAG CTGTTTTATTTTTATGTACTCTTAGTTTTATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTTGTTTTTTGTATGTTTGC TTTTTTCCTGTTTTTTGTTTTTTCCATTTACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGGAGAACAAAAAGCTGATGT ATAGCCCTGTATACAGTGTAGATACTATTTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAATATTTCATCATTAAAAAT TTCTTGTATTTCTTGTGCATTAATCTGACGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATTTTTGTTAATTAGATCAGG TTGTCTGCATTTGTTGGTGTAAGTGAACATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCATAGAAAAGGGTCTTCCTA TTAATGGAAGAAGGTAATTTTTAGGATGTGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGTGTTTTTAAAATCTCCAGG GTGTGTTAACAAAAGGGTAAAGTCTTTAGCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACACGGCATTCATGCAAGAGAA TACTGAGTGTGTGAGAGGTTTCAGTAAATGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGGCAAACCAGGCCTGTGTTT ATAGGATGTCCTCATTTTAATGGGTGTTTGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGAATTTTAATTTTTTTTATA AATTGAAACTTAGGACAGTGGTAGGTAGAATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGGAGGGTCACTTTTTCTTCA TATAATTCGTGGCCACAGGGTAGGACACAAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTGAAGCCTGTAAACTTCTAA ATAAAATATACTTTGTTATTGTAACATCTTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAAGAGAATCCTTTGAATTAA AAAGCACTGGGAAGAAATTTGGTGTCATTGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTATTAGAATAGTAATTCACTT GATGTTTGTGTAGGCAGGACTGTTAACAGTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAGGACTTTGCAGTAGGAGA GAGAAAAAGAATAAAAGTGACCTTAAAAAAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCTTTGTGTCAAAGATCTAGA TGTGGCCCTTTGGAAAATCCTAGTGTCAGGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGGAGACTACCTGTCACAGTG TGATACTGAATTTGAGAAGATGCTCAATGAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAAGCTCTCTATATTCTGAAA CAAAATATAAACCTTGACCTTAAAAAGCTTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGAGACTTGAAGCTTTGAAAC TGTGACAGACTGAAATGTTAAATATTGAGTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAAGCTTGACGTTTGACTGTT GTTACCATTTCAAGGAAAGAACAGTCCTAACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGGTAACAAGTGCTATTTTAA TTAACATGTAGGGAGGCCACAGAGCATACTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTATTACCATTTATTACCTGT GTATTCCCATTTATTACCTGTGTATTCCTCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCAGTTTTAAGGATTGAATTC AAATGTGTAAATAGCTTAAGAGTATCCGGCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGCAGTGGTGAATTATCTGAT ATTTTTTCCTTAACTTGAATAGCAATCCACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCATCCAATTATAACTGTATT ATTGAAGTGTTATCAAATTACCAAGGCTGTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTTGTATACTAGGGCATGTTT CTTAATGGGAAGGGGGTGAAGGTTATAATAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTGTGGGCCTGGGACCAACCT TAGACTTATCCAGGCCAAGGTATGTTGTTTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAGAACTGTTAACTATAAAAG TTTGACTTTGGAAATGAAGAAAAATTACCTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGATGCATCAGTTACTGTAGC AACACATTTTTTTTAAAAAATTGCTTGTTGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTAATGCCAAATGTCTGCCTT AAAAATAGCAAAGGAGACCATCAGGTTAACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGATTGTAATTTTATAATTACA ATTTTTATAAGATAAAAAACTACCAGTTGTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTTGCTTTAACTTGGGTAGTA >In-frame_ENST00000532331_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(amino acids)=438AA_start in transcript=91_stop in transcript=1407 MLETSPKLGMDTTAAAALPAFVALLLLSPWPLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVD SSDHDPGEKARLQLPTMKENDTHCIDFSYLLYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAE VSGGRSGYIAIDDIQVLSYPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPT HSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKK -------------------------------------------------------------- >In-frame_ENST00000532331_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(transcript)=1496nt_BP=811nt GGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAA GCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTG GCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCT GTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGA CTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCT ATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGT GACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGA AGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCT AGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCA GGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTAC TCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGA AAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAA GGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAA AGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAA AAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACC TATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGG >In-frame_ENST00000532331_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(amino acids)=438AA_start in transcript=91_stop in transcript=1407 MLETSPKLGMDTTAAAALPAFVALLLLSPWPLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVD SSDHDPGEKARLQLPTMKENDTHCIDFSYLLYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAE VSGGRSGYIAIDDIQVLSYPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPT HSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKK -------------------------------------------------------------- >In-frame_ENST00000368213_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(transcript)=4935nt_BP=918nt TCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGG AAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCC CGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTC TTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGT GATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGT TCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGC ATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCC AATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAG GTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCT CCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCAT AACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTT GCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATT GAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCT GTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAG AAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGA GCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGT GGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTG GATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATACC ATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTGAAGAAATTGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGTA CCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTTTGTAGATGCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATAT CAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAAGTTGTAACTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAAT TCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAAAGAGATCTTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTCA GTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAGTTTGTTTTGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCAT CTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTCTTAGTTTTATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTT GTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTTTTCCATTTACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGGA GAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAGATACTATTTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAAT ATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATTAATCTGACGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATTT TTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTAAGTGAACATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCAT AGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTTTAGGATGTGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGTG TTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAAGTCTTTAGCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACACG GCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTTCAGTAAATGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGGC AAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAATGGGTGTTTGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGAA TTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGGTAGGTAGAATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGGA GGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGTAGGACACAAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTGA AGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTGTAACATCTTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAAG AGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTGGTGTCATTGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTATT AGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACTGTTAACAGTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAG GACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGACCTTAAAAAAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCTT TGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCTAGTGTCAGGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGGA GACTACCTGTCACAGTGTGATACTGAATTTGAGAAGATGCTCAATGAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAAG CTCTCTATATTCTGAAACAAAATATAAACCTTGACCTTAAAAAGCTTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGAG ACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAAATATTGAGTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAAG CTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAACAGTCCTAACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGGT AACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACAGAGCATACTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTAT TACCATTTATTACCTGTGTATTCCCATTTATTACCTGTGTATTCCTCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCAG TTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGAGTATCCGGCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGCA GTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATAGCAATCCACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCAT CCAATTATAACTGTATTATTGAAGTGTTATCAAATTACCAAGGCTGTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTTG TATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAGGTTATAATAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTGT GGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGTATGTTGTTTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAGA ACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAAAAATTACCTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGAT GCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAATTGCTTGTTGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTAA TGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCATCAGGTTAACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGATT GTAATTTTATAATTACAATTTTTATAAGATAAAAAACTACCAGTTGTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTTG >In-frame_ENST00000368213_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=18_stop in transcript=1514 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368213_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(transcript)=1603nt_BP=918nt TCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGG AAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCC CGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTC TTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGT GATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGT TCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGC ATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCC AATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAG GTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCT CCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCAT AACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTT GCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATT GAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCT GTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAG AAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGA GCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGT GGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTG >In-frame_ENST00000368213_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=18_stop in transcript=1514 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368210_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(transcript)=4968nt_BP=951nt GAGCAAAGTAACTCTTGACTAACAGGAGCAGCCTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTC GCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGGAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCC GCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACT GCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGT GGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAG CCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAG CTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAAC ATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTA GCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGAC ATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTT CAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAA CCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGG AGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAAT GCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAA GAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGAC CAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAG AGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGG CATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGG TAAATTATTTGTTAGATGAGTAAGCAAGATACCATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTGAAGAAATTGCATTTGATAA CTGCTATTCATTTAACTTTTCTCATTATCAGTACCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTTTGTAGATGCTGTTTCATAC AGCACTTAGATGAATTATTGATCTTCCTAATATCAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAAGTTGTAACTTGAAATTTTC AGATGCTTTGAACTTGACACATACTCTAGCAATTCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAAAGAGATCTTTTCATTTTTC TTATTTTCAGCTTTAAAACTTAGCTGTCGTTCAGTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAGTTTGTTTTGAGGTTTTTCC TCAATAACTTGTTTCCCAGGCCTATTAGGCCATCTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTCTTAGTTTTATGTAAGAAAC CTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTTGTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTTTTCCATTTACGGCAGTGGT ACCATGTTTTGGATGTGTGATGTTTATATGGGAGAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAGATACTATTTTTGTAAAAAC ACAAGGCTAAATTAATGAACAAGAATACTGAATATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATTAATCTGACGATAATTTCCC TGTATATTATGTTCATTTAGCTGTTTGTAATTTTTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTAAGTGAACATCATCACAGTT ATCCTGAGTTGAGTTTAAGCCAAATACATGCATAGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTTTAGGATGTGTATTATTTCA GTTTTGTATGTTTAACTTTTATTAAATAAAGTGTTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAAGTCTTTAGCTGTCAGCACT TAAAGCAATTAAACCTCCAAGTACTTGCACACGGCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTTCAGTAAATGCTTAAGTATT CCTTCCATTAGAAGAAATTGGATCTTAAAGGGCAAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAATGGGTGTTTGTAGATTTTTG GTGGAAGGGGAAAATAAGTTTTTATTTCATGAATTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGGTAGGTAGAATTCTTCATCT CTCCCTTCCACACCCACCCCTCTCAACCCAGGAGGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGTAGGACACAAAGGACAGAAA GGCACAAACTGCAGTAGAAAAAGGGTTTGTTGAAGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTGTAACATCTTAAGAGCTTAT CAATAATCAAGAGTAGCCTTGATGGATTGCAAGAGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTGGTGTCATTGTGTGACCCCA GAAAATGGTTGTTGAGATTACCTTGGTGGTATTAGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACTGTTAACAGTCTTGTCCCTC TTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAGGACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGACCTTAAAAAAAAATGTTTTG AAAATAGACCTTTAGAATGAAATCAGCAACCTTTGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCTAGTGTCAGGATGATGTTTG TGTCTCTGAACTAAGAGGCAGGACTCCTGGGGAGACTACCTGTCACAGTGTGATACTGAATTTGAGAAGATGCTCAATGAGAAGCATGAT ACCCACAGTATTTTACAGTTGAAGGTGGTTAAGCTCTCTATATTCTGAAACAAAATATAAACCTTGACCTTAAAAAGCTTTGTTAGAAAA TTTAATGTAGAGTTTTCCCCATTAAGAAAGGAGACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAAATATTGAGTTATGGGCCCC TAAGTAGAAATGGTTGCATGTAACTTACCAAAGCTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAACAGTCCTAACCTCCCGAAA ATAAAATGTTGAGTTTTAGTGGTAATCACAGGTAACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACAGAGCATACTGGAAAACAGC AAGGACTCTAGAGCCAGACTAGTGTTTGTTTATTACCATTTATTACCTGTGTATTCCCATTTATTACCTGTGTATTCCTCTGATTCATTT TTCTCAGCTGTAGAATGGAAAAATCTGTTTCAGTTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGAGTATCCGGCATAAGCACTA TAGAAGCGTCTGCTATTACTCTGCAGAGTGGCAGTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATAGCAATCCACATTACAATGG ATAACAATACCCATTGTTTATGATTTGAGGCATCCAATTATAACTGTATTATTGAAGTGTTATCAAATTACCAAGGCTGTAGGGTATATT TAGTATTCCTAGTTAAAGGTTTGAACTAATTTGTATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAGGTTATAATAAAAGTCACCC CTAATGCTTGTTTAAAATTAAAGAGGAATTTGTGGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGTATGTTGTTTGACGAACACC GCAGGTGATCCTGATGTGCATCCCCGTCTGAGAACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAAAAATTACCTTTTAGCCTAA TCATGAAGACTAGGCGTCAAACCAAAACAAGATGCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAATTGCTTGTTGTCACAATGAA GGGTGTGTGTCTGTTTCCAGTATGCAATTCTAATGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCATCAGGTTAACATAAAGGAAA ACTGTAGTTGTGTGACTCATGTGTCTGTAGATTGTAATTTTATAATTACAATTTTTATAAGATAAAAAACTACCAGTTGTAAATTCAACC AAAAAAAATTTAAAGCTTTGATTTAGCTTTTTGCTTTAACTTGGGTAGTAACTGAAATATAAAGGAAGAAAATCTATTAAAACCAATGAG >In-frame_ENST00000368210_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=51_stop in transcript=1547 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368210_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(transcript)=1636nt_BP=951nt GAGCAAAGTAACTCTTGACTAACAGGAGCAGCCTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTC GCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGGAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCC GCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACT GCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGT GGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAG CCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAG CTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAAC ATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTA GCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGAC ATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTT CAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAA CCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGG AGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAAT GCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAA GAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGAC CAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAG AGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGG CATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGG >In-frame_ENST00000368210_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=51_stop in transcript=1547 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368215_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(transcript)=4710nt_BP=693nt ATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAG TTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTT AGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAA GCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCT GGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTT CGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATT GCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAA AACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTT CTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGT ATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCT GGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCC ATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAG GAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTT GCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAA TACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATA TTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATACCATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTGAAGAAAT TGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGTACCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTTTGTAGAT GCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATATCAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAAGTTGTAA CTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAATTCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAAAGAGATC TTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTCAGTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAGTTTGTTT TGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCATCTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTCTTAGTTT TATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTTGTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTTTTCCATT TACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGGAGAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAGATACTAT TTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAATATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATTAATCTGA CGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATTTTTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTAAGTGAAC ATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCATAGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTTTAGGATG TGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGTGTTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAAGTCTTTA GCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACACGGCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTTCAGTAAA TGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGGCAAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAATGGGTGTT TGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGAATTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGGTAGGTAG AATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGGAGGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGTAGGACAC AAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTGAAGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTGTAACATC TTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAAGAGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTGGTGTCAT TGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTATTAGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACTGTTAACA GTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAGGACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGACCTTAAAA AAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCTTTGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCTAGTGTCA GGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGGAGACTACCTGTCACAGTGTGATACTGAATTTGAGAAGATGCTCAAT GAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAAGCTCTCTATATTCTGAAACAAAATATAAACCTTGACCTTAAAAAGC TTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGAGACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAAATATTGA GTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAAGCTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAACAGTCCT AACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGGTAACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACAGAGCATA CTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTATTACCATTTATTACCTGTGTATTCCCATTTATTACCTGTGTATTCC TCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCAGTTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGAGTATCCG GCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGCAGTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATAGCAATCC ACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCATCCAATTATAACTGTATTATTGAAGTGTTATCAAATTACCAAGGCT GTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTTGTATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAGGTTATAA TAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTGTGGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGTATGTTGT TTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAGAACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAAAAATTAC CTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGATGCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAATTGCTTGT TGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTAATGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCATCAGGTTA ACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGATTGTAATTTTATAATTACAATTTTTATAAGATAAAAAACTACCAGTT GTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTTGCTTTAACTTGGGTAGTAACTGAAATATAAAGGAAGAAAATCTATT >In-frame_ENST00000368215_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(amino acids)=429AA_start in transcript=0_stop in transcript=1289 MDTTAAAALPAFVALLLLSPWPLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEK ARLQLPTMKENDTHCIDFSYLLYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYI AIDDIQVLSYPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKC MAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQ -------------------------------------------------------------- >In-frame_ENST00000368215_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(transcript)=1378nt_BP=693nt ATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAG TTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTT AGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAA GCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCT GGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTT CGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATT GCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAA AACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTT CTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGT ATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCT GGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCC ATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAG GAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTT GCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAA TACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATA >In-frame_ENST00000368215_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(amino acids)=429AA_start in transcript=0_stop in transcript=1289 MDTTAAAALPAFVALLLLSPWPLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEK ARLQLPTMKENDTHCIDFSYLLYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYI AIDDIQVLSYPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKC MAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQ -------------------------------------------------------------- >In-frame_ENST00000368207_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(transcript)=4935nt_BP=918nt TCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGG AAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCC CGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTC TTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGT GATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGT TCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGC ATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCC AATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAG GTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCT CCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCAT AACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTT GCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATT GAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCT GTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAG AAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGA GCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGT GGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTG GATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATACC ATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTGAAGAAATTGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGTA CCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTTTGTAGATGCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATAT CAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAAGTTGTAACTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAAT TCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAAAGAGATCTTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTCA GTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAGTTTGTTTTGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCAT CTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTCTTAGTTTTATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTT GTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTTTTCCATTTACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGGA GAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAGATACTATTTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAAT ATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATTAATCTGACGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATTT TTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTAAGTGAACATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCAT AGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTTTAGGATGTGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGTG TTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAAGTCTTTAGCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACACG GCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTTCAGTAAATGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGGC AAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAATGGGTGTTTGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGAA TTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGGTAGGTAGAATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGGA GGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGTAGGACACAAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTGA AGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTGTAACATCTTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAAG AGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTGGTGTCATTGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTATT AGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACTGTTAACAGTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAG GACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGACCTTAAAAAAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCTT TGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCTAGTGTCAGGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGGA GACTACCTGTCACAGTGTGATACTGAATTTGAGAAGATGCTCAATGAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAAG CTCTCTATATTCTGAAACAAAATATAAACCTTGACCTTAAAAAGCTTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGAG ACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAAATATTGAGTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAAG CTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAACAGTCCTAACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGGT AACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACAGAGCATACTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTAT TACCATTTATTACCTGTGTATTCCCATTTATTACCTGTGTATTCCTCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCAG TTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGAGTATCCGGCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGCA GTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATAGCAATCCACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCAT CCAATTATAACTGTATTATTGAAGTGTTATCAAATTACCAAGGCTGTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTTG TATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAGGTTATAATAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTGT GGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGTATGTTGTTTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAGA ACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAAAAATTACCTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGAT GCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAATTGCTTGTTGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTAA TGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCATCAGGTTAACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGATT GTAATTTTATAATTACAATTTTTATAAGATAAAAAACTACCAGTTGTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTTG >In-frame_ENST00000368207_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=18_stop in transcript=1514 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368207_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(transcript)=1603nt_BP=918nt TCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGG AAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCC CGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTC TTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGT GATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGT TCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGC ATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCC AATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAG GTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCT CCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCAT AACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTT GCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATT GAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCT GTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAG AAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGA GCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGT GGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTG >In-frame_ENST00000368207_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561180_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=18_stop in transcript=1514 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368226_ENST00000369603_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(transcript)=5026nt_BP=1009nt AGAAGCGCCCGGAGCCCGCGGGGCGACGTCACCCCCGGCTCCGCCCCCGTCCCTCCCCGAGCAAAGTAACTCTTGACTAACAGGAGCAGC CTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAG GAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCC CCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCT CTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTG TGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGG TTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTG CATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGC CAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCA GGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATC TCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCA TAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTT TGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGAT TGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCC TGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAA GAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAG AGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTG TGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTT GGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATAC CATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTGAAGAAATTGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGT ACCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTTTGTAGATGCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATA TCAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAAGTTGTAACTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAA TTCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAAAGAGATCTTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTC AGTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAGTTTGTTTTGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCA TCTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTCTTAGTTTTATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTT TGTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTTTTCCATTTACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGG AGAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAGATACTATTTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAA TATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATTAATCTGACGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATT TTTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTAAGTGAACATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCA TAGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTTTAGGATGTGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGT GTTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAAGTCTTTAGCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACAC GGCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTTCAGTAAATGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGG CAAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAATGGGTGTTTGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGA ATTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGGTAGGTAGAATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGG AGGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGTAGGACACAAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTG AAGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTGTAACATCTTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAA GAGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTGGTGTCATTGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTAT TAGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACTGTTAACAGTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGA GGACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGACCTTAAAAAAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCT TTGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCTAGTGTCAGGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGG AGACTACCTGTCACAGTGTGATACTGAATTTGAGAAGATGCTCAATGAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAA GCTCTCTATATTCTGAAACAAAATATAAACCTTGACCTTAAAAAGCTTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGA GACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAAATATTGAGTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAA GCTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAACAGTCCTAACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGG TAACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACAGAGCATACTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTA TTACCATTTATTACCTGTGTATTCCCATTTATTACCTGTGTATTCCTCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCA GTTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGAGTATCCGGCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGC AGTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATAGCAATCCACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCA TCCAATTATAACTGTATTATTGAAGTGTTATCAAATTACCAAGGCTGTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTT GTATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAGGTTATAATAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTG TGGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGTATGTTGTTTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAG AACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAAAAATTACCTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGA TGCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAATTGCTTGTTGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTA ATGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCATCAGGTTAACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGAT TGTAATTTTATAATTACAATTTTTATAAGATAAAAAACTACCAGTTGTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTT >In-frame_ENST00000368226_ENST00000369603_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=109_stop in transcript=1605 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368226_ENST00000369592_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(transcript)=1694nt_BP=1009nt AGAAGCGCCCGGAGCCCGCGGGGCGACGTCACCCCCGGCTCCGCCCCCGTCCCTCCCCGAGCAAAGTAACTCTTGACTAACAGGAGCAGC CTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAG GAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCC CCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCT CTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTG TGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGG TTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTG CATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGC CAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCA GGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATC TCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCA TAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTT TGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGAT TGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCC TGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAA GAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAG AGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTG TGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTT >In-frame_ENST00000368226_ENST00000369592_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=109_stop in transcript=1605 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368227_ENST00000369603_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(transcript)=5077nt_BP=1060nt GTCTCTCCGGCAGGAGGCGGTGGCGGCGCCGCGCCCGAGCCCGCATTCCTCAGAAGCGCCCGGAGCCCGCGGGGCGACGTCACCCCCGGC TCCGCCCCCGTCCCTCCCCGAGCAAAGTAACTCTTGACTAACAGGAGCAGCCTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGG CGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGGAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTC ACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAA ACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCA AGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGT GCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGG AGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACT GAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGA TTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGG TTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGC AGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAA AGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGA CAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCAC CTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAA CAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACT TGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAG TATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATAC CTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTAT CCTTATATTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATACCATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTG AAGAAATTGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGTACCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTT TGTAGATGCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATATCAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAA GTTGTAACTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAATTCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAA AGAGATCTTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTCAGTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAG TTTGTTTTGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCATCTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTC TTAGTTTTATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTTGTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTT TTCCATTTACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGGAGAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAG ATACTATTTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAATATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATT AATCTGACGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATTTTTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTA AGTGAACATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCATAGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTT TAGGATGTGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGTGTTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAA GTCTTTAGCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACACGGCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTT CAGTAAATGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGGCAAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAAT GGGTGTTTGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGAATTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGG TAGGTAGAATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGGAGGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGT AGGACACAAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTGAAGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTG TAACATCTTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAAGAGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTG GTGTCATTGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTATTAGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACT GTTAACAGTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAGGACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGAC CTTAAAAAAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCTTTGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCT AGTGTCAGGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGGAGACTACCTGTCACAGTGTGATACTGAATTTGAGAAGAT GCTCAATGAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAAGCTCTCTATATTCTGAAACAAAATATAAACCTTGACCTT AAAAAGCTTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGAGACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAA ATATTGAGTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAAGCTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAA CAGTCCTAACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGGTAACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACA GAGCATACTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTATTACCATTTATTACCTGTGTATTCCCATTTATTACCTGT GTATTCCTCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCAGTTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGA GTATCCGGCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGCAGTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATA GCAATCCACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCATCCAATTATAACTGTATTATTGAAGTGTTATCAAATTAC CAAGGCTGTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTTGTATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAG GTTATAATAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTGTGGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGT ATGTTGTTTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAGAACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAA AAATTACCTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGATGCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAAT TGCTTGTTGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTAATGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCAT CAGGTTAACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGATTGTAATTTTATAATTACAATTTTTATAAGATAAAAAACT ACCAGTTGTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTTGCTTTAACTTGGGTAGTAACTGAAATATAAAGGAAGAAA >In-frame_ENST00000368227_ENST00000369603_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=160_stop in transcript=1656 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368227_ENST00000369592_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(transcript)=1745nt_BP=1060nt GTCTCTCCGGCAGGAGGCGGTGGCGGCGCCGCGCCCGAGCCCGCATTCCTCAGAAGCGCCCGGAGCCCGCGGGGCGACGTCACCCCCGGC TCCGCCCCCGTCCCTCCCCGAGCAAAGTAACTCTTGACTAACAGGAGCAGCCTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGG CGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGGAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTC ACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAA ACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCA AGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGT GCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGG AGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACT GAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGA TTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGG TTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGC AGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAA AGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGA CAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCAC CTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAA CAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACT TGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAG TATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATAC CTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTAT >In-frame_ENST00000368227_ENST00000369592_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=160_stop in transcript=1656 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000532331_ENST00000369603_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(transcript)=4828nt_BP=811nt GGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAA GCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTG GCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCT GTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGA CTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCT ATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGT GACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGA AGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCT AGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCA GGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTAC TCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGA AAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAA GGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAA AGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAA AAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACC TATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGG GCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATACCATTGTCGTCATTGGTTG GCTTCAGTAGAATGAAACGTGAAGAAATTGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGTACCACGGTTCCCTCAAAG TTTGTTGAATAAAGCAACTTTTGTAGATGCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATATCAGGCGCCTACTTAACC TATGGTGTGTACTTTTTGTAAGTTGTAACTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAATTCATTGGAACACCAAGG CAAAAACACCAACCTGCTAAAAGAGATCTTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTCAGTTAAGCTTAAAGATAG GTTAATTTGTAAATGGCAAAGTTTGTTTTGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCATCTCTAAAATTGATCTAG CTGTTTTATTTTTATGTACTCTTAGTTTTATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTTGTTTTTTGTATGTTTGC TTTTTTCCTGTTTTTTGTTTTTTCCATTTACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGGAGAACAAAAAGCTGATGT ATAGCCCTGTATACAGTGTAGATACTATTTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAATATTTCATCATTAAAAAT TTCTTGTATTTCTTGTGCATTAATCTGACGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATTTTTGTTAATTAGATCAGG TTGTCTGCATTTGTTGGTGTAAGTGAACATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCATAGAAAAGGGTCTTCCTA TTAATGGAAGAAGGTAATTTTTAGGATGTGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGTGTTTTTAAAATCTCCAGG GTGTGTTAACAAAAGGGTAAAGTCTTTAGCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACACGGCATTCATGCAAGAGAA TACTGAGTGTGTGAGAGGTTTCAGTAAATGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGGCAAACCAGGCCTGTGTTT ATAGGATGTCCTCATTTTAATGGGTGTTTGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGAATTTTAATTTTTTTTATA AATTGAAACTTAGGACAGTGGTAGGTAGAATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGGAGGGTCACTTTTTCTTCA TATAATTCGTGGCCACAGGGTAGGACACAAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTGAAGCCTGTAAACTTCTAA ATAAAATATACTTTGTTATTGTAACATCTTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAAGAGAATCCTTTGAATTAA AAAGCACTGGGAAGAAATTTGGTGTCATTGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTATTAGAATAGTAATTCACTT GATGTTTGTGTAGGCAGGACTGTTAACAGTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAGGACTTTGCAGTAGGAGA GAGAAAAAGAATAAAAGTGACCTTAAAAAAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCTTTGTGTCAAAGATCTAGA TGTGGCCCTTTGGAAAATCCTAGTGTCAGGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGGAGACTACCTGTCACAGTG TGATACTGAATTTGAGAAGATGCTCAATGAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAAGCTCTCTATATTCTGAAA CAAAATATAAACCTTGACCTTAAAAAGCTTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGAGACTTGAAGCTTTGAAAC TGTGACAGACTGAAATGTTAAATATTGAGTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAAGCTTGACGTTTGACTGTT GTTACCATTTCAAGGAAAGAACAGTCCTAACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGGTAACAAGTGCTATTTTAA TTAACATGTAGGGAGGCCACAGAGCATACTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTATTACCATTTATTACCTGT GTATTCCCATTTATTACCTGTGTATTCCTCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCAGTTTTAAGGATTGAATTC AAATGTGTAAATAGCTTAAGAGTATCCGGCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGCAGTGGTGAATTATCTGAT ATTTTTTCCTTAACTTGAATAGCAATCCACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCATCCAATTATAACTGTATT ATTGAAGTGTTATCAAATTACCAAGGCTGTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTTGTATACTAGGGCATGTTT CTTAATGGGAAGGGGGTGAAGGTTATAATAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTGTGGGCCTGGGACCAACCT TAGACTTATCCAGGCCAAGGTATGTTGTTTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAGAACTGTTAACTATAAAAG TTTGACTTTGGAAATGAAGAAAAATTACCTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGATGCATCAGTTACTGTAGC AACACATTTTTTTTAAAAAATTGCTTGTTGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTAATGCCAAATGTCTGCCTT AAAAATAGCAAAGGAGACCATCAGGTTAACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGATTGTAATTTTATAATTACA ATTTTTATAAGATAAAAAACTACCAGTTGTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTTGCTTTAACTTGGGTAGTA >In-frame_ENST00000532331_ENST00000369603_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(amino acids)=438AA_start in transcript=91_stop in transcript=1407 MLETSPKLGMDTTAAAALPAFVALLLLSPWPLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVD SSDHDPGEKARLQLPTMKENDTHCIDFSYLLYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAE VSGGRSGYIAIDDIQVLSYPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPT HSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKK -------------------------------------------------------------- >In-frame_ENST00000532331_ENST00000369592_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(transcript)=1496nt_BP=811nt GGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAA GCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTG GCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCT GTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGA CTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCT ATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGT GACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGA AGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCT AGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCA GGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTAC TCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGA AAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAA GGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAA AGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAA AAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACC TATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGG >In-frame_ENST00000532331_ENST00000369592_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(amino acids)=438AA_start in transcript=91_stop in transcript=1407 MLETSPKLGMDTTAAAALPAFVALLLLSPWPLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVD SSDHDPGEKARLQLPTMKENDTHCIDFSYLLYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAE VSGGRSGYIAIDDIQVLSYPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPT HSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKK -------------------------------------------------------------- >In-frame_ENST00000368213_ENST00000369603_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(transcript)=4935nt_BP=918nt TCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGG AAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCC CGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTC TTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGT GATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGT TCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGC ATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCC AATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAG GTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCT CCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCAT AACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTT GCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATT GAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCT GTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAG AAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGA GCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGT GGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTG GATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATACC ATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTGAAGAAATTGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGTA CCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTTTGTAGATGCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATAT CAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAAGTTGTAACTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAAT TCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAAAGAGATCTTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTCA GTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAGTTTGTTTTGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCAT CTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTCTTAGTTTTATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTT GTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTTTTCCATTTACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGGA GAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAGATACTATTTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAAT ATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATTAATCTGACGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATTT TTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTAAGTGAACATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCAT AGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTTTAGGATGTGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGTG TTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAAGTCTTTAGCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACACG GCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTTCAGTAAATGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGGC AAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAATGGGTGTTTGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGAA TTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGGTAGGTAGAATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGGA GGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGTAGGACACAAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTGA AGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTGTAACATCTTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAAG AGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTGGTGTCATTGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTATT AGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACTGTTAACAGTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAG GACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGACCTTAAAAAAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCTT TGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCTAGTGTCAGGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGGA GACTACCTGTCACAGTGTGATACTGAATTTGAGAAGATGCTCAATGAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAAG CTCTCTATATTCTGAAACAAAATATAAACCTTGACCTTAAAAAGCTTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGAG ACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAAATATTGAGTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAAG CTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAACAGTCCTAACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGGT AACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACAGAGCATACTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTAT TACCATTTATTACCTGTGTATTCCCATTTATTACCTGTGTATTCCTCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCAG TTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGAGTATCCGGCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGCA GTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATAGCAATCCACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCAT CCAATTATAACTGTATTATTGAAGTGTTATCAAATTACCAAGGCTGTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTTG TATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAGGTTATAATAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTGT GGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGTATGTTGTTTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAGA ACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAAAAATTACCTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGAT GCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAATTGCTTGTTGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTAA TGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCATCAGGTTAACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGATT GTAATTTTATAATTACAATTTTTATAAGATAAAAAACTACCAGTTGTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTTG >In-frame_ENST00000368213_ENST00000369603_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=18_stop in transcript=1514 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368213_ENST00000369592_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(transcript)=1603nt_BP=918nt TCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGG AAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCC CGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTC TTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGT GATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGT TCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGC ATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCC AATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAG GTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCT CCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCAT AACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTT GCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATT GAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCT GTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAG AAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGA GCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGT GGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTG >In-frame_ENST00000368213_ENST00000369592_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=18_stop in transcript=1514 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368210_ENST00000369603_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(transcript)=4968nt_BP=951nt GAGCAAAGTAACTCTTGACTAACAGGAGCAGCCTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTC GCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGGAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCC GCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACT GCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGT GGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAG CCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAG CTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAAC ATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTA GCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGAC ATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTT CAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAA CCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGG AGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAAT GCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAA GAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGAC CAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAG AGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGG CATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGG TAAATTATTTGTTAGATGAGTAAGCAAGATACCATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTGAAGAAATTGCATTTGATAA CTGCTATTCATTTAACTTTTCTCATTATCAGTACCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTTTGTAGATGCTGTTTCATAC AGCACTTAGATGAATTATTGATCTTCCTAATATCAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAAGTTGTAACTTGAAATTTTC AGATGCTTTGAACTTGACACATACTCTAGCAATTCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAAAGAGATCTTTTCATTTTTC TTATTTTCAGCTTTAAAACTTAGCTGTCGTTCAGTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAGTTTGTTTTGAGGTTTTTCC TCAATAACTTGTTTCCCAGGCCTATTAGGCCATCTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTCTTAGTTTTATGTAAGAAAC CTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTTGTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTTTTCCATTTACGGCAGTGGT ACCATGTTTTGGATGTGTGATGTTTATATGGGAGAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAGATACTATTTTTGTAAAAAC ACAAGGCTAAATTAATGAACAAGAATACTGAATATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATTAATCTGACGATAATTTCCC TGTATATTATGTTCATTTAGCTGTTTGTAATTTTTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTAAGTGAACATCATCACAGTT ATCCTGAGTTGAGTTTAAGCCAAATACATGCATAGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTTTAGGATGTGTATTATTTCA GTTTTGTATGTTTAACTTTTATTAAATAAAGTGTTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAAGTCTTTAGCTGTCAGCACT TAAAGCAATTAAACCTCCAAGTACTTGCACACGGCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTTCAGTAAATGCTTAAGTATT CCTTCCATTAGAAGAAATTGGATCTTAAAGGGCAAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAATGGGTGTTTGTAGATTTTTG GTGGAAGGGGAAAATAAGTTTTTATTTCATGAATTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGGTAGGTAGAATTCTTCATCT CTCCCTTCCACACCCACCCCTCTCAACCCAGGAGGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGTAGGACACAAAGGACAGAAA GGCACAAACTGCAGTAGAAAAAGGGTTTGTTGAAGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTGTAACATCTTAAGAGCTTAT CAATAATCAAGAGTAGCCTTGATGGATTGCAAGAGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTGGTGTCATTGTGTGACCCCA GAAAATGGTTGTTGAGATTACCTTGGTGGTATTAGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACTGTTAACAGTCTTGTCCCTC TTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAGGACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGACCTTAAAAAAAAATGTTTTG AAAATAGACCTTTAGAATGAAATCAGCAACCTTTGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCTAGTGTCAGGATGATGTTTG TGTCTCTGAACTAAGAGGCAGGACTCCTGGGGAGACTACCTGTCACAGTGTGATACTGAATTTGAGAAGATGCTCAATGAGAAGCATGAT ACCCACAGTATTTTACAGTTGAAGGTGGTTAAGCTCTCTATATTCTGAAACAAAATATAAACCTTGACCTTAAAAAGCTTTGTTAGAAAA TTTAATGTAGAGTTTTCCCCATTAAGAAAGGAGACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAAATATTGAGTTATGGGCCCC TAAGTAGAAATGGTTGCATGTAACTTACCAAAGCTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAACAGTCCTAACCTCCCGAAA ATAAAATGTTGAGTTTTAGTGGTAATCACAGGTAACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACAGAGCATACTGGAAAACAGC AAGGACTCTAGAGCCAGACTAGTGTTTGTTTATTACCATTTATTACCTGTGTATTCCCATTTATTACCTGTGTATTCCTCTGATTCATTT TTCTCAGCTGTAGAATGGAAAAATCTGTTTCAGTTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGAGTATCCGGCATAAGCACTA TAGAAGCGTCTGCTATTACTCTGCAGAGTGGCAGTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATAGCAATCCACATTACAATGG ATAACAATACCCATTGTTTATGATTTGAGGCATCCAATTATAACTGTATTATTGAAGTGTTATCAAATTACCAAGGCTGTAGGGTATATT TAGTATTCCTAGTTAAAGGTTTGAACTAATTTGTATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAGGTTATAATAAAAGTCACCC CTAATGCTTGTTTAAAATTAAAGAGGAATTTGTGGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGTATGTTGTTTGACGAACACC GCAGGTGATCCTGATGTGCATCCCCGTCTGAGAACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAAAAATTACCTTTTAGCCTAA TCATGAAGACTAGGCGTCAAACCAAAACAAGATGCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAATTGCTTGTTGTCACAATGAA GGGTGTGTGTCTGTTTCCAGTATGCAATTCTAATGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCATCAGGTTAACATAAAGGAAA ACTGTAGTTGTGTGACTCATGTGTCTGTAGATTGTAATTTTATAATTACAATTTTTATAAGATAAAAAACTACCAGTTGTAAATTCAACC AAAAAAAATTTAAAGCTTTGATTTAGCTTTTTGCTTTAACTTGGGTAGTAACTGAAATATAAAGGAAGAAAATCTATTAAAACCAATGAG >In-frame_ENST00000368210_ENST00000369603_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=51_stop in transcript=1547 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368210_ENST00000369592_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(transcript)=1636nt_BP=951nt GAGCAAAGTAACTCTTGACTAACAGGAGCAGCCTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTC GCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGGAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCC GCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACT GCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGT GGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAG CCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAG CTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAAC ATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTA GCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGAC ATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTT CAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAA CCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGG AGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAAT GCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAA GAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGAC CAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAG AGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGG CATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGG >In-frame_ENST00000368210_ENST00000369592_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=51_stop in transcript=1547 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368215_ENST00000369603_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(transcript)=4710nt_BP=693nt ATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAG TTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTT AGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAA GCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCT GGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTT CGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATT GCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAA AACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTT CTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGT ATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCT GGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCC ATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAG GAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTT GCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAA TACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATA TTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATACCATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTGAAGAAAT TGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGTACCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTTTGTAGAT GCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATATCAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAAGTTGTAA CTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAATTCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAAAGAGATC TTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTCAGTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAGTTTGTTT TGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCATCTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTCTTAGTTT TATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTTGTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTTTTCCATT TACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGGAGAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAGATACTAT TTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAATATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATTAATCTGA CGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATTTTTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTAAGTGAAC ATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCATAGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTTTAGGATG TGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGTGTTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAAGTCTTTA GCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACACGGCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTTCAGTAAA TGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGGCAAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAATGGGTGTT TGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGAATTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGGTAGGTAG AATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGGAGGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGTAGGACAC AAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTGAAGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTGTAACATC TTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAAGAGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTGGTGTCAT TGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTATTAGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACTGTTAACA GTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAGGACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGACCTTAAAA AAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCTTTGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCTAGTGTCA GGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGGAGACTACCTGTCACAGTGTGATACTGAATTTGAGAAGATGCTCAAT GAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAAGCTCTCTATATTCTGAAACAAAATATAAACCTTGACCTTAAAAAGC TTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGAGACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAAATATTGA GTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAAGCTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAACAGTCCT AACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGGTAACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACAGAGCATA CTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTATTACCATTTATTACCTGTGTATTCCCATTTATTACCTGTGTATTCC TCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCAGTTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGAGTATCCG GCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGCAGTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATAGCAATCC ACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCATCCAATTATAACTGTATTATTGAAGTGTTATCAAATTACCAAGGCT GTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTTGTATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAGGTTATAA TAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTGTGGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGTATGTTGT TTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAGAACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAAAAATTAC CTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGATGCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAATTGCTTGT TGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTAATGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCATCAGGTTA ACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGATTGTAATTTTATAATTACAATTTTTATAAGATAAAAAACTACCAGTT GTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTTGCTTTAACTTGGGTAGTAACTGAAATATAAAGGAAGAAAATCTATT >In-frame_ENST00000368215_ENST00000369603_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(amino acids)=429AA_start in transcript=0_stop in transcript=1289 MDTTAAAALPAFVALLLLSPWPLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEK ARLQLPTMKENDTHCIDFSYLLYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYI AIDDIQVLSYPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKC MAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQ -------------------------------------------------------------- >In-frame_ENST00000368215_ENST00000369592_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(transcript)=1378nt_BP=693nt ATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAG TTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTT AGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAA GCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCT GGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTT CGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATT GCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAA AACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTT CTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGT ATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCT GGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCC ATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAG GAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTT GCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAA TACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATA >In-frame_ENST00000368215_ENST00000369592_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(amino acids)=429AA_start in transcript=0_stop in transcript=1289 MDTTAAAALPAFVALLLLSPWPLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEK ARLQLPTMKENDTHCIDFSYLLYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYI AIDDIQVLSYPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKC MAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQ -------------------------------------------------------------- >In-frame_ENST00000368207_ENST00000369603_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(transcript)=4935nt_BP=918nt TCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGG AAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCC CGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTC TTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGT GATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGT TCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGC ATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCC AATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAG GTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCT CCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCAT AACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTT GCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATT GAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCT GTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAG AAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGA GCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGT GGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTG GATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATACC ATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTGAAGAAATTGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGTA CCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTTTGTAGATGCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATAT CAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAAGTTGTAACTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAAT TCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAAAGAGATCTTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTCA GTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAGTTTGTTTTGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCAT CTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTCTTAGTTTTATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTT GTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTTTTCCATTTACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGGA GAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAGATACTATTTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAAT ATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATTAATCTGACGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATTT TTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTAAGTGAACATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCAT AGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTTTAGGATGTGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGTG TTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAAGTCTTTAGCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACACG GCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTTCAGTAAATGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGGC AAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAATGGGTGTTTGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGAA TTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGGTAGGTAGAATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGGA GGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGTAGGACACAAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTGA AGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTGTAACATCTTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAAG AGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTGGTGTCATTGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTATT AGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACTGTTAACAGTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAG GACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGACCTTAAAAAAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCTT TGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCTAGTGTCAGGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGGA GACTACCTGTCACAGTGTGATACTGAATTTGAGAAGATGCTCAATGAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAAG CTCTCTATATTCTGAAACAAAATATAAACCTTGACCTTAAAAAGCTTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGAG ACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAAATATTGAGTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAAG CTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAACAGTCCTAACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGGT AACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACAGAGCATACTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTAT TACCATTTATTACCTGTGTATTCCCATTTATTACCTGTGTATTCCTCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCAG TTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGAGTATCCGGCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGCA GTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATAGCAATCCACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCAT CCAATTATAACTGTATTATTGAAGTGTTATCAAATTACCAAGGCTGTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTTG TATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAGGTTATAATAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTGT GGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGTATGTTGTTTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAGA ACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAAAAATTACCTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGAT GCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAATTGCTTGTTGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTAA TGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCATCAGGTTAACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGATT GTAATTTTATAATTACAATTTTTATAAGATAAAAAACTACCAGTTGTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTTG >In-frame_ENST00000368207_ENST00000369603_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=18_stop in transcript=1514 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368207_ENST00000369592_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(transcript)=1603nt_BP=918nt TCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGG AAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCC CGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTC TTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGT GATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGT TCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGC ATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCC AATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAG GTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCT CCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCAT AACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTT GCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATT GAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCT GTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAG AAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGA GCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGT GGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTG >In-frame_ENST00000368207_ENST00000369592_TCGA-ZH-A8Y1_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058548_length(amino acids)=498AA_start in transcript=18_stop in transcript=1514 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368226_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(transcript)=5026nt_BP=1009nt AGAAGCGCCCGGAGCCCGCGGGGCGACGTCACCCCCGGCTCCGCCCCCGTCCCTCCCCGAGCAAAGTAACTCTTGACTAACAGGAGCAGC CTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAG GAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCC CCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCT CTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTG TGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGG TTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTG CATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGC CAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCA GGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATC TCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCA TAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTT TGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGAT TGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCC TGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAA GAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAG AGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTG TGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTT GGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATAC CATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTGAAGAAATTGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGT ACCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTTTGTAGATGCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATA TCAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAAGTTGTAACTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAA TTCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAAAGAGATCTTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTC AGTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAGTTTGTTTTGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCA TCTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTCTTAGTTTTATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTT TGTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTTTTCCATTTACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGG AGAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAGATACTATTTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAA TATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATTAATCTGACGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATT TTTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTAAGTGAACATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCA TAGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTTTAGGATGTGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGT GTTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAAGTCTTTAGCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACAC GGCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTTCAGTAAATGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGG CAAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAATGGGTGTTTGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGA ATTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGGTAGGTAGAATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGG AGGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGTAGGACACAAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTG AAGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTGTAACATCTTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAA GAGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTGGTGTCATTGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTAT TAGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACTGTTAACAGTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGA GGACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGACCTTAAAAAAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCT TTGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCTAGTGTCAGGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGG AGACTACCTGTCACAGTGTGATACTGAATTTGAGAAGATGCTCAATGAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAA GCTCTCTATATTCTGAAACAAAATATAAACCTTGACCTTAAAAAGCTTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGA GACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAAATATTGAGTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAA GCTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAACAGTCCTAACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGG TAACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACAGAGCATACTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTA TTACCATTTATTACCTGTGTATTCCCATTTATTACCTGTGTATTCCTCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCA GTTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGAGTATCCGGCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGC AGTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATAGCAATCCACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCA TCCAATTATAACTGTATTATTGAAGTGTTATCAAATTACCAAGGCTGTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTT GTATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAGGTTATAATAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTG TGGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGTATGTTGTTTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAG AACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAAAAATTACCTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGA TGCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAATTGCTTGTTGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTA ATGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCATCAGGTTAACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGAT TGTAATTTTATAATTACAATTTTTATAAGATAAAAAACTACCAGTTGTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTT >In-frame_ENST00000368226_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(amino acids)=498AA_start in transcript=109_stop in transcript=1605 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368226_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(transcript)=1694nt_BP=1009nt AGAAGCGCCCGGAGCCCGCGGGGCGACGTCACCCCCGGCTCCGCCCCCGTCCCTCCCCGAGCAAAGTAACTCTTGACTAACAGGAGCAGC CTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAG GAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCC CCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCT CTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTG TGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGG TTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTG CATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGC CAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCA GGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATC TCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCA TAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTT TGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGAT TGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCC TGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAA GAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAG AGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTG TGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTT >In-frame_ENST00000368226_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(amino acids)=498AA_start in transcript=109_stop in transcript=1605 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368227_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(transcript)=5077nt_BP=1060nt GTCTCTCCGGCAGGAGGCGGTGGCGGCGCCGCGCCCGAGCCCGCATTCCTCAGAAGCGCCCGGAGCCCGCGGGGCGACGTCACCCCCGGC TCCGCCCCCGTCCCTCCCCGAGCAAAGTAACTCTTGACTAACAGGAGCAGCCTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGG CGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGGAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTC ACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAA ACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCA AGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGT GCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGG AGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACT GAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGA TTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGG TTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGC AGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAA AGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGA CAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCAC CTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAA CAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACT TGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAG TATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATAC CTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTAT CCTTATATTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATACCATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTG AAGAAATTGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGTACCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTT TGTAGATGCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATATCAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAA GTTGTAACTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAATTCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAA AGAGATCTTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTCAGTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAG TTTGTTTTGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCATCTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTC TTAGTTTTATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTTGTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTT TTCCATTTACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGGAGAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAG ATACTATTTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAATATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATT AATCTGACGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATTTTTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTA AGTGAACATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCATAGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTT TAGGATGTGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGTGTTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAA GTCTTTAGCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACACGGCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTT CAGTAAATGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGGCAAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAAT GGGTGTTTGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGAATTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGG TAGGTAGAATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGGAGGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGT AGGACACAAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTGAAGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTG TAACATCTTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAAGAGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTG GTGTCATTGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTATTAGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACT GTTAACAGTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAGGACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGAC CTTAAAAAAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCTTTGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCT AGTGTCAGGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGGAGACTACCTGTCACAGTGTGATACTGAATTTGAGAAGAT GCTCAATGAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAAGCTCTCTATATTCTGAAACAAAATATAAACCTTGACCTT AAAAAGCTTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGAGACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAA ATATTGAGTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAAGCTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAA CAGTCCTAACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGGTAACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACA GAGCATACTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTATTACCATTTATTACCTGTGTATTCCCATTTATTACCTGT GTATTCCTCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCAGTTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGA GTATCCGGCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGCAGTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATA GCAATCCACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCATCCAATTATAACTGTATTATTGAAGTGTTATCAAATTAC CAAGGCTGTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTTGTATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAG GTTATAATAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTGTGGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGT ATGTTGTTTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAGAACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAA AAATTACCTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGATGCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAAT TGCTTGTTGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTAATGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCAT CAGGTTAACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGATTGTAATTTTATAATTACAATTTTTATAAGATAAAAAACT ACCAGTTGTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTTGCTTTAACTTGGGTAGTAACTGAAATATAAAGGAAGAAA >In-frame_ENST00000368227_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(amino acids)=498AA_start in transcript=160_stop in transcript=1656 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368227_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(transcript)=1745nt_BP=1060nt GTCTCTCCGGCAGGAGGCGGTGGCGGCGCCGCGCCCGAGCCCGCATTCCTCAGAAGCGCCCGGAGCCCGCGGGGCGACGTCACCCCCGGC TCCGCCCCCGTCCCTCCCCGAGCAAAGTAACTCTTGACTAACAGGAGCAGCCTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGG CGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGGAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTC ACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAA ACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCA AGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGT GCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGG AGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACT GAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGA TTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGG TTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGC AGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAA AGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGA CAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCAC CTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAA CAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACT TGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAG TATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATAC CTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTAT >In-frame_ENST00000368227_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(amino acids)=498AA_start in transcript=160_stop in transcript=1656 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000532331_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(transcript)=4828nt_BP=811nt GGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAA GCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTG GCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCT GTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGA CTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCT ATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGT GACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGA AGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCT AGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCA GGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTAC TCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGA AAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAA GGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAA AGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAA AAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACC TATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGG GCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATACCATTGTCGTCATTGGTTG GCTTCAGTAGAATGAAACGTGAAGAAATTGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGTACCACGGTTCCCTCAAAG TTTGTTGAATAAAGCAACTTTTGTAGATGCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATATCAGGCGCCTACTTAACC TATGGTGTGTACTTTTTGTAAGTTGTAACTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAATTCATTGGAACACCAAGG CAAAAACACCAACCTGCTAAAAGAGATCTTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTCAGTTAAGCTTAAAGATAG GTTAATTTGTAAATGGCAAAGTTTGTTTTGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCATCTCTAAAATTGATCTAG CTGTTTTATTTTTATGTACTCTTAGTTTTATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTTGTTTTTTGTATGTTTGC TTTTTTCCTGTTTTTTGTTTTTTCCATTTACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGGAGAACAAAAAGCTGATGT ATAGCCCTGTATACAGTGTAGATACTATTTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAATATTTCATCATTAAAAAT TTCTTGTATTTCTTGTGCATTAATCTGACGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATTTTTGTTAATTAGATCAGG TTGTCTGCATTTGTTGGTGTAAGTGAACATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCATAGAAAAGGGTCTTCCTA TTAATGGAAGAAGGTAATTTTTAGGATGTGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGTGTTTTTAAAATCTCCAGG GTGTGTTAACAAAAGGGTAAAGTCTTTAGCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACACGGCATTCATGCAAGAGAA TACTGAGTGTGTGAGAGGTTTCAGTAAATGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGGCAAACCAGGCCTGTGTTT ATAGGATGTCCTCATTTTAATGGGTGTTTGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGAATTTTAATTTTTTTTATA AATTGAAACTTAGGACAGTGGTAGGTAGAATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGGAGGGTCACTTTTTCTTCA TATAATTCGTGGCCACAGGGTAGGACACAAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTGAAGCCTGTAAACTTCTAA ATAAAATATACTTTGTTATTGTAACATCTTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAAGAGAATCCTTTGAATTAA AAAGCACTGGGAAGAAATTTGGTGTCATTGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTATTAGAATAGTAATTCACTT GATGTTTGTGTAGGCAGGACTGTTAACAGTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAGGACTTTGCAGTAGGAGA GAGAAAAAGAATAAAAGTGACCTTAAAAAAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCTTTGTGTCAAAGATCTAGA TGTGGCCCTTTGGAAAATCCTAGTGTCAGGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGGAGACTACCTGTCACAGTG TGATACTGAATTTGAGAAGATGCTCAATGAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAAGCTCTCTATATTCTGAAA CAAAATATAAACCTTGACCTTAAAAAGCTTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGAGACTTGAAGCTTTGAAAC TGTGACAGACTGAAATGTTAAATATTGAGTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAAGCTTGACGTTTGACTGTT GTTACCATTTCAAGGAAAGAACAGTCCTAACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGGTAACAAGTGCTATTTTAA TTAACATGTAGGGAGGCCACAGAGCATACTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTATTACCATTTATTACCTGT GTATTCCCATTTATTACCTGTGTATTCCTCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCAGTTTTAAGGATTGAATTC AAATGTGTAAATAGCTTAAGAGTATCCGGCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGCAGTGGTGAATTATCTGAT ATTTTTTCCTTAACTTGAATAGCAATCCACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCATCCAATTATAACTGTATT ATTGAAGTGTTATCAAATTACCAAGGCTGTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTTGTATACTAGGGCATGTTT CTTAATGGGAAGGGGGTGAAGGTTATAATAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTGTGGGCCTGGGACCAACCT TAGACTTATCCAGGCCAAGGTATGTTGTTTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAGAACTGTTAACTATAAAAG TTTGACTTTGGAAATGAAGAAAAATTACCTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGATGCATCAGTTACTGTAGC AACACATTTTTTTTAAAAAATTGCTTGTTGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTAATGCCAAATGTCTGCCTT AAAAATAGCAAAGGAGACCATCAGGTTAACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGATTGTAATTTTATAATTACA ATTTTTATAAGATAAAAAACTACCAGTTGTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTTGCTTTAACTTGGGTAGTA >In-frame_ENST00000532331_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(amino acids)=438AA_start in transcript=91_stop in transcript=1407 MLETSPKLGMDTTAAAALPAFVALLLLSPWPLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVD SSDHDPGEKARLQLPTMKENDTHCIDFSYLLYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAE VSGGRSGYIAIDDIQVLSYPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPT HSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKK -------------------------------------------------------------- >In-frame_ENST00000532331_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(transcript)=1496nt_BP=811nt GGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAA GCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTG GCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCT GTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGA CTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCT ATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGT GACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGA AGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCT AGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCA GGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTAC TCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGA AAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAA GGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAA AGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAA AAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACC TATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGG >In-frame_ENST00000532331_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(amino acids)=438AA_start in transcript=91_stop in transcript=1407 MLETSPKLGMDTTAAAALPAFVALLLLSPWPLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVD SSDHDPGEKARLQLPTMKENDTHCIDFSYLLYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAE VSGGRSGYIAIDDIQVLSYPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPT HSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKK -------------------------------------------------------------- >In-frame_ENST00000368213_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(transcript)=4935nt_BP=918nt TCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGG AAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCC CGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTC TTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGT GATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGT TCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGC ATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCC AATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAG GTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCT CCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCAT AACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTT GCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATT GAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCT GTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAG AAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGA GCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGT GGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTG GATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATACC ATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTGAAGAAATTGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGTA CCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTTTGTAGATGCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATAT CAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAAGTTGTAACTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAAT TCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAAAGAGATCTTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTCA GTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAGTTTGTTTTGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCAT CTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTCTTAGTTTTATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTT GTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTTTTCCATTTACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGGA GAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAGATACTATTTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAAT ATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATTAATCTGACGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATTT TTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTAAGTGAACATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCAT AGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTTTAGGATGTGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGTG TTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAAGTCTTTAGCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACACG GCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTTCAGTAAATGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGGC AAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAATGGGTGTTTGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGAA TTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGGTAGGTAGAATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGGA GGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGTAGGACACAAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTGA AGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTGTAACATCTTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAAG AGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTGGTGTCATTGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTATT AGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACTGTTAACAGTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAG GACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGACCTTAAAAAAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCTT TGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCTAGTGTCAGGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGGA GACTACCTGTCACAGTGTGATACTGAATTTGAGAAGATGCTCAATGAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAAG CTCTCTATATTCTGAAACAAAATATAAACCTTGACCTTAAAAAGCTTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGAG ACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAAATATTGAGTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAAG CTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAACAGTCCTAACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGGT AACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACAGAGCATACTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTAT TACCATTTATTACCTGTGTATTCCCATTTATTACCTGTGTATTCCTCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCAG TTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGAGTATCCGGCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGCA GTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATAGCAATCCACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCAT CCAATTATAACTGTATTATTGAAGTGTTATCAAATTACCAAGGCTGTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTTG TATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAGGTTATAATAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTGT GGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGTATGTTGTTTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAGA ACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAAAAATTACCTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGAT GCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAATTGCTTGTTGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTAA TGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCATCAGGTTAACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGATT GTAATTTTATAATTACAATTTTTATAAGATAAAAAACTACCAGTTGTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTTG >In-frame_ENST00000368213_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(amino acids)=498AA_start in transcript=18_stop in transcript=1514 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368213_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(transcript)=1603nt_BP=918nt TCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGG AAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCC CGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTC TTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGT GATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGT TCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGC ATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCC AATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAG GTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCT CCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCAT AACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTT GCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATT GAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCT GTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAG AAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGA GCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGT GGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTG >In-frame_ENST00000368213_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(amino acids)=498AA_start in transcript=18_stop in transcript=1514 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368210_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(transcript)=4968nt_BP=951nt GAGCAAAGTAACTCTTGACTAACAGGAGCAGCCTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTC GCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGGAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCC GCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACT GCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGT GGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAG CCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAG CTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAAC ATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTA GCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGAC ATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTT CAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAA CCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGG AGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAAT GCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAA GAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGAC CAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAG AGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGG CATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGG TAAATTATTTGTTAGATGAGTAAGCAAGATACCATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTGAAGAAATTGCATTTGATAA CTGCTATTCATTTAACTTTTCTCATTATCAGTACCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTTTGTAGATGCTGTTTCATAC AGCACTTAGATGAATTATTGATCTTCCTAATATCAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAAGTTGTAACTTGAAATTTTC AGATGCTTTGAACTTGACACATACTCTAGCAATTCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAAAGAGATCTTTTCATTTTTC TTATTTTCAGCTTTAAAACTTAGCTGTCGTTCAGTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAGTTTGTTTTGAGGTTTTTCC TCAATAACTTGTTTCCCAGGCCTATTAGGCCATCTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTCTTAGTTTTATGTAAGAAAC CTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTTGTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTTTTCCATTTACGGCAGTGGT ACCATGTTTTGGATGTGTGATGTTTATATGGGAGAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAGATACTATTTTTGTAAAAAC ACAAGGCTAAATTAATGAACAAGAATACTGAATATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATTAATCTGACGATAATTTCCC TGTATATTATGTTCATTTAGCTGTTTGTAATTTTTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTAAGTGAACATCATCACAGTT ATCCTGAGTTGAGTTTAAGCCAAATACATGCATAGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTTTAGGATGTGTATTATTTCA GTTTTGTATGTTTAACTTTTATTAAATAAAGTGTTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAAGTCTTTAGCTGTCAGCACT TAAAGCAATTAAACCTCCAAGTACTTGCACACGGCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTTCAGTAAATGCTTAAGTATT CCTTCCATTAGAAGAAATTGGATCTTAAAGGGCAAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAATGGGTGTTTGTAGATTTTTG GTGGAAGGGGAAAATAAGTTTTTATTTCATGAATTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGGTAGGTAGAATTCTTCATCT CTCCCTTCCACACCCACCCCTCTCAACCCAGGAGGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGTAGGACACAAAGGACAGAAA GGCACAAACTGCAGTAGAAAAAGGGTTTGTTGAAGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTGTAACATCTTAAGAGCTTAT CAATAATCAAGAGTAGCCTTGATGGATTGCAAGAGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTGGTGTCATTGTGTGACCCCA GAAAATGGTTGTTGAGATTACCTTGGTGGTATTAGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACTGTTAACAGTCTTGTCCCTC TTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAGGACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGACCTTAAAAAAAAATGTTTTG AAAATAGACCTTTAGAATGAAATCAGCAACCTTTGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCTAGTGTCAGGATGATGTTTG TGTCTCTGAACTAAGAGGCAGGACTCCTGGGGAGACTACCTGTCACAGTGTGATACTGAATTTGAGAAGATGCTCAATGAGAAGCATGAT ACCCACAGTATTTTACAGTTGAAGGTGGTTAAGCTCTCTATATTCTGAAACAAAATATAAACCTTGACCTTAAAAAGCTTTGTTAGAAAA TTTAATGTAGAGTTTTCCCCATTAAGAAAGGAGACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAAATATTGAGTTATGGGCCCC TAAGTAGAAATGGTTGCATGTAACTTACCAAAGCTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAACAGTCCTAACCTCCCGAAA ATAAAATGTTGAGTTTTAGTGGTAATCACAGGTAACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACAGAGCATACTGGAAAACAGC AAGGACTCTAGAGCCAGACTAGTGTTTGTTTATTACCATTTATTACCTGTGTATTCCCATTTATTACCTGTGTATTCCTCTGATTCATTT TTCTCAGCTGTAGAATGGAAAAATCTGTTTCAGTTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGAGTATCCGGCATAAGCACTA TAGAAGCGTCTGCTATTACTCTGCAGAGTGGCAGTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATAGCAATCCACATTACAATGG ATAACAATACCCATTGTTTATGATTTGAGGCATCCAATTATAACTGTATTATTGAAGTGTTATCAAATTACCAAGGCTGTAGGGTATATT TAGTATTCCTAGTTAAAGGTTTGAACTAATTTGTATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAGGTTATAATAAAAGTCACCC CTAATGCTTGTTTAAAATTAAAGAGGAATTTGTGGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGTATGTTGTTTGACGAACACC GCAGGTGATCCTGATGTGCATCCCCGTCTGAGAACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAAAAATTACCTTTTAGCCTAA TCATGAAGACTAGGCGTCAAACCAAAACAAGATGCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAATTGCTTGTTGTCACAATGAA GGGTGTGTGTCTGTTTCCAGTATGCAATTCTAATGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCATCAGGTTAACATAAAGGAAA ACTGTAGTTGTGTGACTCATGTGTCTGTAGATTGTAATTTTATAATTACAATTTTTATAAGATAAAAAACTACCAGTTGTAAATTCAACC AAAAAAAATTTAAAGCTTTGATTTAGCTTTTTGCTTTAACTTGGGTAGTAACTGAAATATAAAGGAAGAAAATCTATTAAAACCAATGAG >In-frame_ENST00000368210_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(amino acids)=498AA_start in transcript=51_stop in transcript=1547 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368210_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(transcript)=1636nt_BP=951nt GAGCAAAGTAACTCTTGACTAACAGGAGCAGCCTCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTC GCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGGAAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCC GCTCCTCCGTCGTGGATTTCGCGGCGATCCCCCCGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACT GCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGT GGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAG CCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAG CTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAAC ATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTA GCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGAC ATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTT CAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAA CCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGG AGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAAT GCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAA GAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGAC CAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAG AGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGG CATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGG >In-frame_ENST00000368210_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(amino acids)=498AA_start in transcript=51_stop in transcript=1547 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368215_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(transcript)=4710nt_BP=693nt ATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAG TTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTT AGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAA GCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCT GGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTT CGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATT GCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAA AACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTT CTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGT ATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCT GGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCC ATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAG GAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTT GCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAA TACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATA TTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATACCATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTGAAGAAAT TGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGTACCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTTTGTAGAT GCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATATCAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAAGTTGTAA CTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAATTCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAAAGAGATC TTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTCAGTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAGTTTGTTT TGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCATCTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTCTTAGTTT TATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTTGTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTTTTCCATT TACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGGAGAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAGATACTAT TTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAATATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATTAATCTGA CGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATTTTTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTAAGTGAAC ATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCATAGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTTTAGGATG TGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGTGTTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAAGTCTTTA GCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACACGGCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTTCAGTAAA TGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGGCAAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAATGGGTGTT TGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGAATTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGGTAGGTAG AATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGGAGGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGTAGGACAC AAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTGAAGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTGTAACATC TTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAAGAGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTGGTGTCAT TGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTATTAGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACTGTTAACA GTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAGGACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGACCTTAAAA AAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCTTTGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCTAGTGTCA GGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGGAGACTACCTGTCACAGTGTGATACTGAATTTGAGAAGATGCTCAAT GAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAAGCTCTCTATATTCTGAAACAAAATATAAACCTTGACCTTAAAAAGC TTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGAGACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAAATATTGA GTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAAGCTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAACAGTCCT AACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGGTAACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACAGAGCATA CTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTATTACCATTTATTACCTGTGTATTCCCATTTATTACCTGTGTATTCC TCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCAGTTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGAGTATCCG GCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGCAGTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATAGCAATCC ACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCATCCAATTATAACTGTATTATTGAAGTGTTATCAAATTACCAAGGCT GTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTTGTATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAGGTTATAA TAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTGTGGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGTATGTTGT TTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAGAACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAAAAATTAC CTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGATGCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAATTGCTTGT TGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTAATGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCATCAGGTTA ACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGATTGTAATTTTATAATTACAATTTTTATAAGATAAAAAACTACCAGTT GTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTTGCTTTAACTTGGGTAGTAACTGAAATATAAAGGAAGAAAATCTATT >In-frame_ENST00000368215_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(amino acids)=429AA_start in transcript=0_stop in transcript=1289 MDTTAAAALPAFVALLLLSPWPLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEK ARLQLPTMKENDTHCIDFSYLLYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYI AIDDIQVLSYPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKC MAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQ -------------------------------------------------------------- >In-frame_ENST00000368215_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(transcript)=1378nt_BP=693nt ATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTCTTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAG TTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGTGATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTT AGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGTTCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAA GCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGCATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCT GGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCCAATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTT CGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATT GCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCTCCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAA AACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCATAACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTT CTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTTGCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGT ATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATTGAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCT GGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCTGTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCC ATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAGAAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAG GAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGAGCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTT GCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGTGGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAA TACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTGGATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATA >In-frame_ENST00000368215_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(amino acids)=429AA_start in transcript=0_stop in transcript=1289 MDTTAAAALPAFVALLLLSPWPLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEK ARLQLPTMKENDTHCIDFSYLLYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYI AIDDIQVLSYPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKC MAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQ -------------------------------------------------------------- >In-frame_ENST00000368207_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(transcript)=4935nt_BP=918nt TCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGG AAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCC CGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTC TTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGT GATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGT TCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGC ATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCC AATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAG GTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCT CCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCAT AACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTT GCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATT GAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCT GTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAG AAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGA GCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGT GGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTG GATTTCATCTCTGCAGGGCTTTACATTTACCTTTTTATCCTTATATTTTTCTAAAGGTAAATTATTTGTTAGATGAGTAAGCAAGATACC ATTGTCGTCATTGGTTGGCTTCAGTAGAATGAAACGTGAAGAAATTGCATTTGATAACTGCTATTCATTTAACTTTTCTCATTATCAGTA CCACGGTTCCCTCAAAGTTTGTTGAATAAAGCAACTTTTGTAGATGCTGTTTCATACAGCACTTAGATGAATTATTGATCTTCCTAATAT CAGGCGCCTACTTAACCTATGGTGTGTACTTTTTGTAAGTTGTAACTTGAAATTTTCAGATGCTTTGAACTTGACACATACTCTAGCAAT TCATTGGAACACCAAGGCAAAAACACCAACCTGCTAAAAGAGATCTTTTCATTTTTCTTATTTTCAGCTTTAAAACTTAGCTGTCGTTCA GTTAAGCTTAAAGATAGGTTAATTTGTAAATGGCAAAGTTTGTTTTGAGGTTTTTCCTCAATAACTTGTTTCCCAGGCCTATTAGGCCAT CTCTAAAATTGATCTAGCTGTTTTATTTTTATGTACTCTTAGTTTTATGTAAGAAACCTTAGGATGAGCTCCCTTTTCTAAGGTGTTTTT GTTTTTTGTATGTTTGCTTTTTTCCTGTTTTTTGTTTTTTCCATTTACGGCAGTGGTACCATGTTTTGGATGTGTGATGTTTATATGGGA GAACAAAAAGCTGATGTATAGCCCTGTATACAGTGTAGATACTATTTTTGTAAAAACACAAGGCTAAATTAATGAACAAGAATACTGAAT ATTTCATCATTAAAAATTTCTTGTATTTCTTGTGCATTAATCTGACGATAATTTCCCTGTATATTATGTTCATTTAGCTGTTTGTAATTT TTGTTAATTAGATCAGGTTGTCTGCATTTGTTGGTGTAAGTGAACATCATCACAGTTATCCTGAGTTGAGTTTAAGCCAAATACATGCAT AGAAAAGGGTCTTCCTATTAATGGAAGAAGGTAATTTTTAGGATGTGTATTATTTCAGTTTTGTATGTTTAACTTTTATTAAATAAAGTG TTTTTAAAATCTCCAGGGTGTGTTAACAAAAGGGTAAAGTCTTTAGCTGTCAGCACTTAAAGCAATTAAACCTCCAAGTACTTGCACACG GCATTCATGCAAGAGAATACTGAGTGTGTGAGAGGTTTCAGTAAATGCTTAAGTATTCCTTCCATTAGAAGAAATTGGATCTTAAAGGGC AAACCAGGCCTGTGTTTATAGGATGTCCTCATTTTAATGGGTGTTTGTAGATTTTTGGTGGAAGGGGAAAATAAGTTTTTATTTCATGAA TTTTAATTTTTTTTATAAATTGAAACTTAGGACAGTGGTAGGTAGAATTCTTCATCTCTCCCTTCCACACCCACCCCTCTCAACCCAGGA GGGTCACTTTTTCTTCATATAATTCGTGGCCACAGGGTAGGACACAAAGGACAGAAAGGCACAAACTGCAGTAGAAAAAGGGTTTGTTGA AGCCTGTAAACTTCTAAATAAAATATACTTTGTTATTGTAACATCTTAAGAGCTTATCAATAATCAAGAGTAGCCTTGATGGATTGCAAG AGAATCCTTTGAATTAAAAAGCACTGGGAAGAAATTTGGTGTCATTGTGTGACCCCAGAAAATGGTTGTTGAGATTACCTTGGTGGTATT AGAATAGTAATTCACTTGATGTTTGTGTAGGCAGGACTGTTAACAGTCTTGTCCCTCTTTTGACCCTGGGGGGCCTTAGTTTTCCCAGAG GACTTTGCAGTAGGAGAGAGAAAAAGAATAAAAGTGACCTTAAAAAAAAATGTTTTGAAAATAGACCTTTAGAATGAAATCAGCAACCTT TGTGTCAAAGATCTAGATGTGGCCCTTTGGAAAATCCTAGTGTCAGGATGATGTTTGTGTCTCTGAACTAAGAGGCAGGACTCCTGGGGA GACTACCTGTCACAGTGTGATACTGAATTTGAGAAGATGCTCAATGAGAAGCATGATACCCACAGTATTTTACAGTTGAAGGTGGTTAAG CTCTCTATATTCTGAAACAAAATATAAACCTTGACCTTAAAAAGCTTTGTTAGAAAATTTAATGTAGAGTTTTCCCCATTAAGAAAGGAG ACTTGAAGCTTTGAAACTGTGACAGACTGAAATGTTAAATATTGAGTTATGGGCCCCTAAGTAGAAATGGTTGCATGTAACTTACCAAAG CTTGACGTTTGACTGTTGTTACCATTTCAAGGAAAGAACAGTCCTAACCTCCCGAAAATAAAATGTTGAGTTTTAGTGGTAATCACAGGT AACAAGTGCTATTTTAATTAACATGTAGGGAGGCCACAGAGCATACTGGAAAACAGCAAGGACTCTAGAGCCAGACTAGTGTTTGTTTAT TACCATTTATTACCTGTGTATTCCCATTTATTACCTGTGTATTCCTCTGATTCATTTTTCTCAGCTGTAGAATGGAAAAATCTGTTTCAG TTTTAAGGATTGAATTCAAATGTGTAAATAGCTTAAGAGTATCCGGCATAAGCACTATAGAAGCGTCTGCTATTACTCTGCAGAGTGGCA GTGGTGAATTATCTGATATTTTTTCCTTAACTTGAATAGCAATCCACATTACAATGGATAACAATACCCATTGTTTATGATTTGAGGCAT CCAATTATAACTGTATTATTGAAGTGTTATCAAATTACCAAGGCTGTAGGGTATATTTAGTATTCCTAGTTAAAGGTTTGAACTAATTTG TATACTAGGGCATGTTTCTTAATGGGAAGGGGGTGAAGGTTATAATAAAAGTCACCCCTAATGCTTGTTTAAAATTAAAGAGGAATTTGT GGGCCTGGGACCAACCTTAGACTTATCCAGGCCAAGGTATGTTGTTTGACGAACACCGCAGGTGATCCTGATGTGCATCCCCGTCTGAGA ACTGTTAACTATAAAAGTTTGACTTTGGAAATGAAGAAAAATTACCTTTTAGCCTAATCATGAAGACTAGGCGTCAAACCAAAACAAGAT GCATCAGTTACTGTAGCAACACATTTTTTTTAAAAAATTGCTTGTTGTCACAATGAAGGGTGTGTGTCTGTTTCCAGTATGCAATTCTAA TGCCAAATGTCTGCCTTAAAAATAGCAAAGGAGACCATCAGGTTAACATAAAGGAAAACTGTAGTTGTGTGACTCATGTGTCTGTAGATT GTAATTTTATAATTACAATTTTTATAAGATAAAAAACTACCAGTTGTAAATTCAACCAAAAAAAATTTAAAGCTTTGATTTAGCTTTTTG >In-frame_ENST00000368207_ENST00000369603_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(amino acids)=498AA_start in transcript=18_stop in transcript=1514 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- >In-frame_ENST00000368207_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(transcript)=1603nt_BP=918nt TCCGCCGAGCATGGAGAGCTGCCGCCGCGGCCGGCCGGCGACGCTGGCGACGCTTTCGCCCCTGAGGTAGTTTGGCGACCGCGAAGAAGG AAAAAGGGCGGGCGGGCGGCTGTCCTCTCACCGTCCTCACCCCGCGAGGCCCGGCCCGCTCCTCCGTCGTGGATTTCGCGGCGATCCCCC CGGCAGCTCTTTGCAAAGCTGCTTGAAACTTCTCCCAAACTCGGCATGGATACGACTGCGGCGGCGGCGCTGCCTGCTTTTGTGGCGCTC TTGCTCCTCTCTCCTTGGCCTCTCCTGGGATCGGCCCAAGGCCAGTTCTCCGCAGGTGGCTGTACTTTTGATGATGGTCCAGGGGCCTGT GATTACCACCAGGATCTGTATGATGACTTTGAATGGGTGCATGTTAGTGCTCAAGAGCCTCATTATCTACCACCCGAGATGCCCCAAGGT TCCTATATGATAGTGGACTCTTCAGATCACGACCCTGGAGAAAAAGCCAGACTTCAGCTGCCTACAATGAAGGAGAACGACACTCACTGC ATTGATTTCAGTTACCTATTATATAGCCAGAAAGGACTGAATCCTGGCACTTTGAACATATTAGTTAGGGTGAATAAAGGACCTCTTGCC AATCCAATTTGGAATGTGACTGGATTCACGGGTAGAGATTGGCTTCGGGCTGAGCTAGCAGTGAGCACCTTTTGGCCCAATGAATATCAG GTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTACTGAGTTATCCTTGTGATAAATCT CCTCATTTCCTCCGTCTAGGGGATGTAGAGGTGAATGCAGGGCAAAACGCTACATTTCAGTGCATTGCCACAGGGAGAGATGCTGTGCAT AACAAGTTATGGCTCCAGGAAGTTATAGAACTAACCAAAGACCTTCTGTCAACTCAACCTTCTGAGACGCTTGCAAGTTCAGACAGTTTT GCTTCTACTCAACCTACTCATTCATGGAAAGTAGGAGACAAGTGTATGGCAGTCTGGAGTGAAGATGGACAGTGTTATGAAGCGGAGATT GAGGAGATAGATGAAGAAAATGGCACCGCTGCAATCACCTTTGCTGGTTATGGCAATGCTGAAGTGACTCCACTGTTGAACCTCAAGCCT GTAGAAGAAGGAAGGAAGGCAAAGGAGGACAGTGGCAACAAACCCATGTCAAAAAAAGAAATGATTGCCCAGCAGCGTGAATATAAAAAG AAGAAAGCTTTGAAAAAAGCTCAGAGAATAAAAGAACTTGAGCAGGAAAGAGAGGACCAGAAAGTGAAATGGCAACAATTCAACAACAGA GCCTATTCTAAAAACAAAAAAGGCCAGGTAAAGAGGAGTATTTTTGCTTCACCTGAGAGTGTGACTGGTAAAGTTGGAGTAGGAACCTGT GGAATTGCTGATAAACCTATGACACAATATCAAGATACCTCTAAATACAATGTCAGGCATTTGATGCCTCAATAATCAGAAAAACTGTTG >In-frame_ENST00000368207_ENST00000369592_TCGA-ZH-A8Y1-01A_PTPRK_chr6_128561179_-_SMNDC1_chr10_112058547_length(amino acids)=498AA_start in transcript=18_stop in transcript=1514 MPPRPAGDAGDAFAPEVVWRPRRRKKGGRAAVLSPSSPREARPAPPSWISRRSPRQLFAKLLETSPKLGMDTTAAAALPAFVALLLLSPW PLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKENDTHCIDFSYL LYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEAEVSGGRSGYIAIDDIQVLSYPCDKSPHFLRL GDVEVNAGQNATFQCIATGRDAVHNKLWLQEVIELTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEE NGTAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQFNNRAYSKNK -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for PTPRK-SMNDC1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for PTPRK-SMNDC1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for PTPRK-SMNDC1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | PTPRK | C0025202 | melanoma | 2 | CTD_human |
Hgene | PTPRK | C0033578 | Prostatic Neoplasms | 1 | CTD_human |
Hgene | PTPRK | C0376358 | Malignant neoplasm of prostate | 1 | CTD_human |