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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:PTPRN2-LRRC37B (FusionGDB2 ID:70060)

Fusion Gene Summary for PTPRN2-LRRC37B

check button Fusion gene summary
Fusion gene informationFusion gene name: PTPRN2-LRRC37B
Fusion gene ID: 70060
HgeneTgene
Gene symbol

PTPRN2

LRRC37B

Gene ID

5799

114659

Gene nameprotein tyrosine phosphatase receptor type N2leucine rich repeat containing 37B
SynonymsIA-2beta|IAR|ICAAR|PTPRP|R-PTP-N2LRRC37
Cytomap

7q36.3

17q11.2

Type of geneprotein-codingprotein-coding
Descriptionreceptor-type tyrosine-protein phosphatase N2IAR/receptor-like protein-tyrosine phosphataseislet cell autoantigen-related proteinphogrinprotein tyrosine phosphatase receptor piprotein tyrosine phosphatase, receptor type, N polypeptide 2tyrosine phosleucine-rich repeat-containing protein 37BC66 SLIT-like testicular protein
Modification date2020031320200313
UniProtAcc.

Q96QE4

Ensembl transtripts involved in fusion geneENST00000389413, ENST00000409483, 
ENST00000389416, ENST00000389418, 
ENST00000404321, 		ENST00000543378, 
ENST00000327564, ENST00000394713, 
ENST00000584368, ENST00000341671, 
ENST00000581786, 
Fusion gene scores* DoF score20 X 17 X 7=238013 X 14 X 8=1456
# samples 2315
** MAII scorelog2(23/2380*10)=-3.37125580725093
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(15/1456*10)=-3.27897594970282
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: PTPRN2 [Title/Abstract] AND LRRC37B [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointPTPRN2(157903521)-LRRC37B(30357675), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across PTPRN2 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across LRRC37B (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4UCECTCGA-BK-A139-02APTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+


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Fusion Gene ORF analysis for PTPRN2-LRRC37B

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
intron-3CDSENST00000389413ENST00000543378PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
intron-3CDSENST00000389413ENST00000327564PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
intron-intronENST00000389413ENST00000394713PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
intron-intronENST00000389413ENST00000584368PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
intron-intronENST00000389413ENST00000341671PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
intron-intronENST00000389413ENST00000581786PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
In-frameENST00000409483ENST00000543378PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
In-frameENST00000409483ENST00000327564PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
5CDS-intronENST00000409483ENST00000394713PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
5CDS-intronENST00000409483ENST00000584368PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
5CDS-intronENST00000409483ENST00000341671PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
5CDS-intronENST00000409483ENST00000581786PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
In-frameENST00000389416ENST00000543378PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
In-frameENST00000389416ENST00000327564PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
5CDS-intronENST00000389416ENST00000394713PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
5CDS-intronENST00000389416ENST00000584368PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
5CDS-intronENST00000389416ENST00000341671PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
5CDS-intronENST00000389416ENST00000581786PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
In-frameENST00000389418ENST00000543378PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
In-frameENST00000389418ENST00000327564PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
5CDS-intronENST00000389418ENST00000394713PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
5CDS-intronENST00000389418ENST00000584368PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
5CDS-intronENST00000389418ENST00000341671PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
5CDS-intronENST00000389418ENST00000581786PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
In-frameENST00000404321ENST00000543378PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
In-frameENST00000404321ENST00000327564PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
5CDS-intronENST00000404321ENST00000394713PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
5CDS-intronENST00000404321ENST00000584368PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
5CDS-intronENST00000404321ENST00000341671PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+
5CDS-intronENST00000404321ENST00000581786PTPRN2chr7

157903521

-LRRC37Bchr17

30357675

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000409483PTPRN2chr7157903521-ENST00000543378LRRC37Bchr1730357675+28271648442668874
ENST00000409483PTPRN2chr7157903521-ENST00000327564LRRC37Bchr1730357675+28451648442668874
ENST00000389416PTPRN2chr7157903521-ENST00000543378LRRC37Bchr1730357675+28131634152654879
ENST00000389416PTPRN2chr7157903521-ENST00000327564LRRC37Bchr1730357675+28311634152654879
ENST00000389418PTPRN2chr7157903521-ENST00000543378LRRC37Bchr1730357675+28321653102673887
ENST00000389418PTPRN2chr7157903521-ENST00000327564LRRC37Bchr1730357675+28501653102673887
ENST00000404321PTPRN2chr7157903521-ENST00000543378LRRC37Bchr1730357675+2891171202732910
ENST00000404321PTPRN2chr7157903521-ENST00000327564LRRC37Bchr1730357675+2909171202732910

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000409483ENST00000543378PTPRN2chr7157903521-LRRC37Bchr1730357675+0.0075243130.9924757
ENST00000409483ENST00000327564PTPRN2chr7157903521-LRRC37Bchr1730357675+0.0067624180.9932375
ENST00000389416ENST00000543378PTPRN2chr7157903521-LRRC37Bchr1730357675+0.0058397810.9941603
ENST00000389416ENST00000327564PTPRN2chr7157903521-LRRC37Bchr1730357675+0.0052915020.99470854
ENST00000389418ENST00000543378PTPRN2chr7157903521-LRRC37Bchr1730357675+0.0073369930.992663
ENST00000389418ENST00000327564PTPRN2chr7157903521-LRRC37Bchr1730357675+0.0066746130.99332535
ENST00000404321ENST00000543378PTPRN2chr7157903521-LRRC37Bchr1730357675+0.0029842510.9970157
ENST00000404321ENST00000327564PTPRN2chr7157903521-LRRC37Bchr1730357675+0.0026822420.99731773

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Fusion Genomic Features for PTPRN2-LRRC37B


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
PTPRN2chr7157903520-LRRC37Bchr1730357674+3.60E-050.999964
PTPRN2chr7157903520-LRRC37Bchr1730357674+3.60E-050.999964

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for PTPRN2-LRRC37B


check button Go to

FGviewer for the breakpoints of chr7:157903521-chr17:30357675

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.LRRC37B

Q96QE4

FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneLRRC37Bchr7:157903521chr17:30357675ENST00000341671212867_897607.6666666666666948.0Coiled coilOntology_term=ECO:0000255
TgeneLRRC37Bchr7:157903521chr17:30357675ENST00000341671212628_649607.6666666666666948.0RepeatNote=LRR 4
TgeneLRRC37Bchr7:157903521chr17:30357675ENST00000341671212655_676607.6666666666666948.0RepeatNote=LRR 5
TgeneLRRC37Bchr7:157903521chr17:30357675ENST00000341671212679_699607.6666666666666948.0RepeatNote=LRR 6
TgeneLRRC37Bchr7:157903521chr17:30357675ENST00000341671212927_947607.6666666666666948.0Topological domainCytoplasmic
TgeneLRRC37Bchr7:157903521chr17:30357675ENST00000341671212906_926607.6666666666666948.0TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389413-122745_10050987.0DomainTyrosine-protein phosphatase
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389416-922745_1005530.6666666666666999.0DomainTyrosine-protein phosphatase
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389418-1023745_1005547.66666666666661016.0DomainTyrosine-protein phosphatase
HgenePTPRN2chr7:157903521chr17:30357675ENST00000404321-1023745_1005570.66666666666661039.0DomainTyrosine-protein phosphatase
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389413-1221004_10100987.0MotifLeucine-based sorting signal
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389413-122666_6750987.0MotifTyrosine-based internalization motif
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389416-9221004_1010530.6666666666666999.0MotifLeucine-based sorting signal
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389416-922666_675530.6666666666666999.0MotifTyrosine-based internalization motif
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389418-10231004_1010547.66666666666661016.0MotifLeucine-based sorting signal
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389418-1023666_675547.66666666666661016.0MotifTyrosine-based internalization motif
HgenePTPRN2chr7:157903521chr17:30357675ENST00000404321-10231004_1010570.66666666666661039.0MotifLeucine-based sorting signal
HgenePTPRN2chr7:157903521chr17:30357675ENST00000404321-1023666_675570.66666666666661039.0MotifTyrosine-based internalization motif
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389413-122945_9510987.0RegionSubstrate binding
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389416-922945_951530.6666666666666999.0RegionSubstrate binding
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389418-1023945_951547.66666666666661016.0RegionSubstrate binding
HgenePTPRN2chr7:157903521chr17:30357675ENST00000404321-1023945_951570.66666666666661039.0RegionSubstrate binding
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389413-12222_6150987.0Topological domainExtracellular
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389413-122637_10150987.0Topological domainCytoplasmic
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389416-92222_615530.6666666666666999.0Topological domainExtracellular
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389416-922637_1015530.6666666666666999.0Topological domainCytoplasmic
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389418-102322_615547.66666666666661016.0Topological domainExtracellular
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389418-1023637_1015547.66666666666661016.0Topological domainCytoplasmic
HgenePTPRN2chr7:157903521chr17:30357675ENST00000404321-102322_615570.66666666666661039.0Topological domainExtracellular
HgenePTPRN2chr7:157903521chr17:30357675ENST00000404321-1023637_1015570.66666666666661039.0Topological domainCytoplasmic
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389413-122616_6360987.0TransmembraneHelical
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389416-922616_636530.6666666666666999.0TransmembraneHelical
HgenePTPRN2chr7:157903521chr17:30357675ENST00000389418-1023616_636547.66666666666661016.0TransmembraneHelical
HgenePTPRN2chr7:157903521chr17:30357675ENST00000404321-1023616_636570.66666666666661039.0TransmembraneHelical
TgeneLRRC37Bchr7:157903521chr17:30357675ENST00000341671212556_577607.6666666666666948.0RepeatNote=LRR 1
TgeneLRRC37Bchr7:157903521chr17:30357675ENST00000341671212580_601607.6666666666666948.0RepeatNote=LRR 2
TgeneLRRC37Bchr7:157903521chr17:30357675ENST00000341671212604_625607.6666666666666948.0RepeatNote=LRR 3
TgeneLRRC37Bchr7:157903521chr17:30357675ENST0000034167121228_905607.6666666666666948.0Topological domainExtracellular


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Fusion Gene Sequence for PTPRN2-LRRC37B


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000409483_ENST00000543378_TCGA-BK-A139-02A_PTPRN2_chr7_157903521_-_LRRC37B_chr17_30357675_length(transcript)=2827nt_BP=1648nt
GAGCGCGAGAGGCGCGGCGGGAGGAGCCGGCGGCGCGCGCCTCCCTGGGCCCGGACTCGGCCGCCTCCCGCCGCCTCCCGCGCGGCCATG
GACTGAGCGCCGCCGGCCAGGCCGCGGGGATGGGGCCGCCGCTCCCGCTGCTGCTGCTGCTACTGCTGCTGCTGCCGCCACGCGTCCTGC
CTGCCGCCCCTTCGTCCGTCCCCCGCGGCCGGCAGCTCCCGGGGCGTCTGGGCTGCCTGCTCGAGGAGGGCCTCTGCGGAGCGTCCGAGG
CCTGTGTGAACGGTTTCACGTGGCAGGATGACTATACTCAGTATGTGATGGACCAGGAACTTGCAGACCTCCCGAAAACCTACCTGAGGC
GTCCTGAAGCATCCAGCCCAGCCAGGCCCTCAAAACACAGCGTTGGCAGCGAGAGGAGGTACAGTCGGGAGGGCGGTGCTGCCCTGGCCA
ACGCCCTCCGACGCCACCTGCCCTTCCTGGAGGCCCTGTCCCAGGCCCCAGCCTCAGACGTGCTCGCCAGGACCCATACGGCGCAGGACA
GACCCCCCGCTGAGGGTGATGACCGCTTCTCCGAGAGCATCCTGACCTATGTGGCCCACACGTCTGCGCTGACCTACCCTCCCGGGTCCC
GGACCCAGCTCCGCGAGGACCTCCTGCCGCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAGCCCTAAGGTGGACAGTGGTGTGGACA
GACACCATCTGATGGCGGCCCTCAGTGCCTATGCTGCCCAGAGGCCCCCAGCTCCCCCCGGGGAGGGCAGCCTGGAGCCACAGTACCTTC
TGCGTGCACCCTCAAGAATGCCCAGGCCTTTGCTGGCACCAGCCGCCCCCCAGAAGTGGCCTTCACCTCTGGGAGATTCCGAAGACCCCT
CCAGCACAGGCGATGGAGCACGGATTCATACCCTCCTGAAGGACCTGCAGAGGCAGCCGGCTGAGGTGAGGGGCCTGAGTGGCCTGGAGC
TGGACGGCATGGCTGAGCTGATGGCTGGCCTGATGCAAGGCGTGGACCATGGAGTAGCTCGAGGCAGCCCTGGGAGAGCGGCCCTGGGAG
AGTCTGGAGAACAGGCGGATGGCCCCAAGGCCACCCTCCGTGGAGACAGCTTTCCAGATGACGGAGTGCAGGACGACGATGATAGACTTT
ACCAAGAGGTCCATCGTCTGAGTGCCACACTCGGGGGCCTCCTGCAGGACCACGGGTCTCGACTCTTACCTGGAGCCCTCCCCTTTGCAA
GGCCCCTCGACATGGAGAGGAAGAAGTCCGAGCACCCTGAGTCTTCCCTGTCTTCAGAAGAGGAGACTGCCGGAGTGGAGAACGTCAAGA
GCCAGACGTATTCCAAAGATCTGCTGGGGCAGCAGCCGCATTCGGAGCCCGGGGCCGCTGCGTTTGGGGAGCTCCAAAACCAGATGCCTG
GGCCCTCGAAGGAGGAGCAGAGCCTTCCAGCGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCCTTCCGAGGAAG
AGGCGCGGGGCTACATCGTGACAGACAGAGACCCCCTGCGCCCCGAGGAAGGAAGGCGGCTGGTGGAGGACGTCGCCCGCCTCCTGCAGG
TGCCCAGCAGTGCGTTCGCTGACGTGGAAGATTTATCCTGCAATAAAATACGATATATTGAAAGACAAACATTTGAATCACTACCATTTT
TGCAGTATATAAATCTGGGCTGCAATTTAATTACAAAACTGAGCCTTGGAACATTTCAGGCCTGGCACGGAATGCAGTTTTTACACAACT
TAATTCTCAATCGCAATCCTCTGACTACTGTCGAAGATCCATATCTCTTTGAACTGCCGGCATTAAAATATCTAGACATGGGAACAACAC
ACATCACACTTACAACACTTAAGAACATTCTCACGATGACTGTTGAACTGGAAAAACTGATCTTACCTAGCCATATGGCCTGCTGCCTCT
GCCAATTTAAAAATAGCATTGAGGCTGTCTGCAAGACAGTCAAGCTGCATTGCAACACTGCATGTCTGACTAACAGCATACATTGTCCTG
AAGAAGCATCTGTAGGGAATCCAGAAGGAGCGTTCATGAAGATGTTACAAGCCCGGAAGCAGCACATGAGCACTCAGCTGACTATTGAGT
CGGAGGCGCCCTCAGACAGCAGTGGCATCAACTTGTCAGGCTTTGGGGGTGATCAGCTTGAAATTCAGCTAACCGAGCAGCTACGGTCCC
TCATCCCCAACGAGGATGTGAGAAAGTTCATGTCTCATGTTATCCGGACCTTGAAAATGGAATGTTCAGAAACACATGTGCAAGGGAGCT
GTGCCAAGCTCATGTTGCGAACAGGCCTCCTGATGAAGCTTCTCAGCGAGCAGCAGGAAGCAAAGGCATTGAATGTAGAATGGGATACGG
ACCAACAAAAAACAAATTATATTAATGAGAACATGGAACAGAATGAACAGAAAGAGCAGAAGTCAAGTGAGCTCATGAAAGAAGTTCCAG
GAGATGACTATAAGAACAAACTCATCTTCGCAATATCTGTGACTGTAATACTAATAATTTTGATTATAATTTTTTGTCTTATAGAGGTGA
ATTCACATAAAAGGGCATCAGAAAAATACAAAGACAACCCATCAATATCAGGAGCCTGAGCATGAGTTAAAGCATGTGGATGGCCTGGAG
CTATGTTTTTAAAATTGTTATTAAATATTGGTTTTTTACTTAAATCAATGAAAACTTTCTTTACTTTGTGGTTGTGTTCCTCAAAATGAG

>In-frame_ENST00000409483_ENST00000543378_TCGA-BK-A139-02A_PTPRN2_chr7_157903521_-_LRRC37B_chr17_30357675_length(amino acids)=874AA_start in transcript=44_stop in transcript=2668
MGPDSAASRRLPRGHGLSAAGQAAGMGPPLPLLLLLLLLLPPRVLPAAPSSVPRGRQLPGRLGCLLEEGLCGASEACVNGFTWQDDYTQY
VMDQELADLPKTYLRRPEASSPARPSKHSVGSERRYSREGGAALANALRRHLPFLEALSQAPASDVLARTHTAQDRPPAEGDDRFSESIL
TYVAHTSALTYPPGSRTQLREDLLPRTLGQLQPDELSPKVDSGVDRHHLMAALSAYAAQRPPAPPGEGSLEPQYLLRAPSRMPRPLLAPA
APQKWPSPLGDSEDPSSTGDGARIHTLLKDLQRQPAEVRGLSGLELDGMAELMAGLMQGVDHGVARGSPGRAALGESGEQADGPKATLRG
DSFPDDGVQDDDDRLYQEVHRLSATLGGLLQDHGSRLLPGALPFARPLDMERKKSEHPESSLSSEEETAGVENVKSQTYSKDLLGQQPHS
EPGAAAFGELQNQMPGPSKEEQSLPAGAQEALSDGLQLEVQPSEEEARGYIVTDRDPLRPEEGRRLVEDVARLLQVPSSAFADVEDLSCN
KIRYIERQTFESLPFLQYINLGCNLITKLSLGTFQAWHGMQFLHNLILNRNPLTTVEDPYLFELPALKYLDMGTTHITLTTLKNILTMTV
ELEKLILPSHMACCLCQFKNSIEAVCKTVKLHCNTACLTNSIHCPEEASVGNPEGAFMKMLQARKQHMSTQLTIESEAPSDSSGINLSGF
GGDQLEIQLTEQLRSLIPNEDVRKFMSHVIRTLKMECSETHVQGSCAKLMLRTGLLMKLLSEQQEAKALNVEWDTDQQKTNYINENMEQN

--------------------------------------------------------------
>In-frame_ENST00000409483_ENST00000327564_TCGA-BK-A139-02A_PTPRN2_chr7_157903521_-_LRRC37B_chr17_30357675_length(transcript)=2845nt_BP=1648nt
GAGCGCGAGAGGCGCGGCGGGAGGAGCCGGCGGCGCGCGCCTCCCTGGGCCCGGACTCGGCCGCCTCCCGCCGCCTCCCGCGCGGCCATG
GACTGAGCGCCGCCGGCCAGGCCGCGGGGATGGGGCCGCCGCTCCCGCTGCTGCTGCTGCTACTGCTGCTGCTGCCGCCACGCGTCCTGC
CTGCCGCCCCTTCGTCCGTCCCCCGCGGCCGGCAGCTCCCGGGGCGTCTGGGCTGCCTGCTCGAGGAGGGCCTCTGCGGAGCGTCCGAGG
CCTGTGTGAACGGTTTCACGTGGCAGGATGACTATACTCAGTATGTGATGGACCAGGAACTTGCAGACCTCCCGAAAACCTACCTGAGGC
GTCCTGAAGCATCCAGCCCAGCCAGGCCCTCAAAACACAGCGTTGGCAGCGAGAGGAGGTACAGTCGGGAGGGCGGTGCTGCCCTGGCCA
ACGCCCTCCGACGCCACCTGCCCTTCCTGGAGGCCCTGTCCCAGGCCCCAGCCTCAGACGTGCTCGCCAGGACCCATACGGCGCAGGACA
GACCCCCCGCTGAGGGTGATGACCGCTTCTCCGAGAGCATCCTGACCTATGTGGCCCACACGTCTGCGCTGACCTACCCTCCCGGGTCCC
GGACCCAGCTCCGCGAGGACCTCCTGCCGCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAGCCCTAAGGTGGACAGTGGTGTGGACA
GACACCATCTGATGGCGGCCCTCAGTGCCTATGCTGCCCAGAGGCCCCCAGCTCCCCCCGGGGAGGGCAGCCTGGAGCCACAGTACCTTC
TGCGTGCACCCTCAAGAATGCCCAGGCCTTTGCTGGCACCAGCCGCCCCCCAGAAGTGGCCTTCACCTCTGGGAGATTCCGAAGACCCCT
CCAGCACAGGCGATGGAGCACGGATTCATACCCTCCTGAAGGACCTGCAGAGGCAGCCGGCTGAGGTGAGGGGCCTGAGTGGCCTGGAGC
TGGACGGCATGGCTGAGCTGATGGCTGGCCTGATGCAAGGCGTGGACCATGGAGTAGCTCGAGGCAGCCCTGGGAGAGCGGCCCTGGGAG
AGTCTGGAGAACAGGCGGATGGCCCCAAGGCCACCCTCCGTGGAGACAGCTTTCCAGATGACGGAGTGCAGGACGACGATGATAGACTTT
ACCAAGAGGTCCATCGTCTGAGTGCCACACTCGGGGGCCTCCTGCAGGACCACGGGTCTCGACTCTTACCTGGAGCCCTCCCCTTTGCAA
GGCCCCTCGACATGGAGAGGAAGAAGTCCGAGCACCCTGAGTCTTCCCTGTCTTCAGAAGAGGAGACTGCCGGAGTGGAGAACGTCAAGA
GCCAGACGTATTCCAAAGATCTGCTGGGGCAGCAGCCGCATTCGGAGCCCGGGGCCGCTGCGTTTGGGGAGCTCCAAAACCAGATGCCTG
GGCCCTCGAAGGAGGAGCAGAGCCTTCCAGCGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCCTTCCGAGGAAG
AGGCGCGGGGCTACATCGTGACAGACAGAGACCCCCTGCGCCCCGAGGAAGGAAGGCGGCTGGTGGAGGACGTCGCCCGCCTCCTGCAGG
TGCCCAGCAGTGCGTTCGCTGACGTGGAAGATTTATCCTGCAATAAAATACGATATATTGAAAGACAAACATTTGAATCACTACCATTTT
TGCAGTATATAAATCTGGGCTGCAATTTAATTACAAAACTGAGCCTTGGAACATTTCAGGCCTGGCACGGAATGCAGTTTTTACACAACT
TAATTCTCAATCGCAATCCTCTGACTACTGTCGAAGATCCATATCTCTTTGAACTGCCGGCATTAAAATATCTAGACATGGGAACAACAC
ACATCACACTTACAACACTTAAGAACATTCTCACGATGACTGTTGAACTGGAAAAACTGATCTTACCTAGCCATATGGCCTGCTGCCTCT
GCCAATTTAAAAATAGCATTGAGGCTGTCTGCAAGACAGTCAAGCTGCATTGCAACACTGCATGTCTGACTAACAGCATACATTGTCCTG
AAGAAGCATCTGTAGGGAATCCAGAAGGAGCGTTCATGAAGATGTTACAAGCCCGGAAGCAGCACATGAGCACTCAGCTGACTATTGAGT
CGGAGGCGCCCTCAGACAGCAGTGGCATCAACTTGTCAGGCTTTGGGGGTGATCAGCTTGAAATTCAGCTAACCGAGCAGCTACGGTCCC
TCATCCCCAACGAGGATGTGAGAAAGTTCATGTCTCATGTTATCCGGACCTTGAAAATGGAATGTTCAGAAACACATGTGCAAGGGAGCT
GTGCCAAGCTCATGTTGCGAACAGGCCTCCTGATGAAGCTTCTCAGCGAGCAGCAGGAAGCAAAGGCATTGAATGTAGAATGGGATACGG
ACCAACAAAAAACAAATTATATTAATGAGAACATGGAACAGAATGAACAGAAAGAGCAGAAGTCAAGTGAGCTCATGAAAGAAGTTCCAG
GAGATGACTATAAGAACAAACTCATCTTCGCAATATCTGTGACTGTAATACTAATAATTTTGATTATAATTTTTTGTCTTATAGAGGTGA
ATTCACATAAAAGGGCATCAGAAAAATACAAAGACAACCCATCAATATCAGGAGCCTGAGCATGAGTTAAAGCATGTGGATGGCCTGGAG
CTATGTTTTTAAAATTGTTATTAAATATTGGTTTTTTACTTAAATCAATGAAAACTTTCTTTACTTTGTGGTTGTGTTCCTCAAAATGAG

>In-frame_ENST00000409483_ENST00000327564_TCGA-BK-A139-02A_PTPRN2_chr7_157903521_-_LRRC37B_chr17_30357675_length(amino acids)=874AA_start in transcript=44_stop in transcript=2668
MGPDSAASRRLPRGHGLSAAGQAAGMGPPLPLLLLLLLLLPPRVLPAAPSSVPRGRQLPGRLGCLLEEGLCGASEACVNGFTWQDDYTQY
VMDQELADLPKTYLRRPEASSPARPSKHSVGSERRYSREGGAALANALRRHLPFLEALSQAPASDVLARTHTAQDRPPAEGDDRFSESIL
TYVAHTSALTYPPGSRTQLREDLLPRTLGQLQPDELSPKVDSGVDRHHLMAALSAYAAQRPPAPPGEGSLEPQYLLRAPSRMPRPLLAPA
APQKWPSPLGDSEDPSSTGDGARIHTLLKDLQRQPAEVRGLSGLELDGMAELMAGLMQGVDHGVARGSPGRAALGESGEQADGPKATLRG
DSFPDDGVQDDDDRLYQEVHRLSATLGGLLQDHGSRLLPGALPFARPLDMERKKSEHPESSLSSEEETAGVENVKSQTYSKDLLGQQPHS
EPGAAAFGELQNQMPGPSKEEQSLPAGAQEALSDGLQLEVQPSEEEARGYIVTDRDPLRPEEGRRLVEDVARLLQVPSSAFADVEDLSCN
KIRYIERQTFESLPFLQYINLGCNLITKLSLGTFQAWHGMQFLHNLILNRNPLTTVEDPYLFELPALKYLDMGTTHITLTTLKNILTMTV
ELEKLILPSHMACCLCQFKNSIEAVCKTVKLHCNTACLTNSIHCPEEASVGNPEGAFMKMLQARKQHMSTQLTIESEAPSDSSGINLSGF
GGDQLEIQLTEQLRSLIPNEDVRKFMSHVIRTLKMECSETHVQGSCAKLMLRTGLLMKLLSEQQEAKALNVEWDTDQQKTNYINENMEQN

--------------------------------------------------------------
>In-frame_ENST00000389416_ENST00000543378_TCGA-BK-A139-02A_PTPRN2_chr7_157903521_-_LRRC37B_chr17_30357675_length(transcript)=2813nt_BP=1634nt
CCGCGCGGCCATGGACTGAGCGCCGCCGGCCAGGCCGCGGGGATGGGGCCGCCGCTCCCGCTGCTGCTGCTGCTACTGCTGCTGCTGCCG
CCACGCGTCCTGCCTGCCGCCCCTTCGTCCGTCCCCCGCGGCCGGCAGCTCCCGGGGCGTCTGGATGGAGTGTTTGGAAGGTGCCAGAAG
GTTCCGGCAATGGACTTTTACCGCTACGAGGTGTCGCCCGTGGCCCTGCAGCGCCTGCGCGTGGCGTTGCAGAAGCTTTCCGGCACAGGT
TTCACGTGGCAGGATGACTATACTCAGTATGTGATGGACCAGGAACTTGCAGACCTCCCGAAAACCTACCTGAGGCGTCCTGAAGCATCC
AGCCCAGCCAGGCCCTCAAAACACAGCGTTGGCAGCGAGAGGAGGTACAGTCGGGAGGGCGGTGCTGCCCTGGCCAACGCCCTCCGACGC
CACCTGCCCTTCCTGGAGGCCCTGTCCCAGGCCCCAGCCTCAGACGTGCTCGCCAGGACCCATACGGCGCAGGACAGACCCCCCGCTGAG
GGTGATGACCGCTTCTCCGAGAGCATCCTGACCTATGTGGCCCACACGTCTGCGCTGACCTACCCTCCCGGGTCCCGGACCCAGCTCCGC
GAGGACCTCCTGCCGCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAGCCCTAAGGTGGACAGTGGTGTGGACAGACACCATCTGATG
GCGGCCCTCAGTGCCTATGCTGCCCAGAGGCCCCCAGCTCCCCCCGGGGAGGGCAGCCTGGAGCCACAGTACCTTCTGCGTGCACCCTCA
AGAATGCCCAGGCCTTTGCTGGCACCAGCCGCCCCCCAGAAGTGGCCTTCACCTCTGGGAGATTCCGAAGACCCCTCCAGCACAGGCGAT
GGAGCACGGATTCATACCCTCCTGAAGGACCTGCAGAGGCAGCCGGCTGAGGTGAGGGGCCTGAGTGGCCTGGAGCTGGACGGCATGGCT
GAGCTGATGGCTGGCCTGATGCAAGGCGTGGACCATGGAGTAGCTCGAGGCAGCCCTGGGAGAGCGGCCCTGGGAGAGTCTGGAGAACAG
GCGGATGGCCCCAAGGCCACCCTCCGTGGAGACAGCTTTCCAGATGACGGAGTGCAGGACGACGATGATAGACTTTACCAAGAGGTCCAT
CGTCTGAGTGCCACACTCGGGGGCCTCCTGCAGGACCACGGGTCTCGACTCTTACCTGGAGCCCTCCCCTTTGCAAGGCCCCTCGACATG
GAGAGGAAGAAGTCCGAGCACCCTGAGTCTTCCCTGTCTTCAGAAGAGGAGACTGCCGGAGTGGAGAACGTCAAGAGCCAGACGTATTCC
AAAGATCTGCTGGGGCAGCAGCCGCATTCGGAGCCCGGGGCCGCTGCGTTTGGGGAGCTCCAAAACCAGATGCCTGGGCCCTCGAAGGAG
GAGCAGAGCCTTCCAGCGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCCTTCCGAGGAAGAGGCGCGGGGCTAC
ATCGTGACAGACAGAGACCCCCTGCGCCCCGAGGAAGGAAGGCGGCTGGTGGAGGACGTCGCCCGCCTCCTGCAGGTGCCCAGCAGTGCG
TTCGCTGACGTGGAAGATTTATCCTGCAATAAAATACGATATATTGAAAGACAAACATTTGAATCACTACCATTTTTGCAGTATATAAAT
CTGGGCTGCAATTTAATTACAAAACTGAGCCTTGGAACATTTCAGGCCTGGCACGGAATGCAGTTTTTACACAACTTAATTCTCAATCGC
AATCCTCTGACTACTGTCGAAGATCCATATCTCTTTGAACTGCCGGCATTAAAATATCTAGACATGGGAACAACACACATCACACTTACA
ACACTTAAGAACATTCTCACGATGACTGTTGAACTGGAAAAACTGATCTTACCTAGCCATATGGCCTGCTGCCTCTGCCAATTTAAAAAT
AGCATTGAGGCTGTCTGCAAGACAGTCAAGCTGCATTGCAACACTGCATGTCTGACTAACAGCATACATTGTCCTGAAGAAGCATCTGTA
GGGAATCCAGAAGGAGCGTTCATGAAGATGTTACAAGCCCGGAAGCAGCACATGAGCACTCAGCTGACTATTGAGTCGGAGGCGCCCTCA
GACAGCAGTGGCATCAACTTGTCAGGCTTTGGGGGTGATCAGCTTGAAATTCAGCTAACCGAGCAGCTACGGTCCCTCATCCCCAACGAG
GATGTGAGAAAGTTCATGTCTCATGTTATCCGGACCTTGAAAATGGAATGTTCAGAAACACATGTGCAAGGGAGCTGTGCCAAGCTCATG
TTGCGAACAGGCCTCCTGATGAAGCTTCTCAGCGAGCAGCAGGAAGCAAAGGCATTGAATGTAGAATGGGATACGGACCAACAAAAAACA
AATTATATTAATGAGAACATGGAACAGAATGAACAGAAAGAGCAGAAGTCAAGTGAGCTCATGAAAGAAGTTCCAGGAGATGACTATAAG
AACAAACTCATCTTCGCAATATCTGTGACTGTAATACTAATAATTTTGATTATAATTTTTTGTCTTATAGAGGTGAATTCACATAAAAGG
GCATCAGAAAAATACAAAGACAACCCATCAATATCAGGAGCCTGAGCATGAGTTAAAGCATGTGGATGGCCTGGAGCTATGTTTTTAAAA
TTGTTATTAAATATTGGTTTTTTACTTAAATCAATGAAAACTTTCTTTACTTTGTGGTTGTGTTCCTCAAAATGAGAATTTTTAACAATA

>In-frame_ENST00000389416_ENST00000543378_TCGA-BK-A139-02A_PTPRN2_chr7_157903521_-_LRRC37B_chr17_30357675_length(amino acids)=879AA_start in transcript=15_stop in transcript=2654
MSAAGQAAGMGPPLPLLLLLLLLLPPRVLPAAPSSVPRGRQLPGRLDGVFGRCQKVPAMDFYRYEVSPVALQRLRVALQKLSGTGFTWQD
DYTQYVMDQELADLPKTYLRRPEASSPARPSKHSVGSERRYSREGGAALANALRRHLPFLEALSQAPASDVLARTHTAQDRPPAEGDDRF
SESILTYVAHTSALTYPPGSRTQLREDLLPRTLGQLQPDELSPKVDSGVDRHHLMAALSAYAAQRPPAPPGEGSLEPQYLLRAPSRMPRP
LLAPAAPQKWPSPLGDSEDPSSTGDGARIHTLLKDLQRQPAEVRGLSGLELDGMAELMAGLMQGVDHGVARGSPGRAALGESGEQADGPK
ATLRGDSFPDDGVQDDDDRLYQEVHRLSATLGGLLQDHGSRLLPGALPFARPLDMERKKSEHPESSLSSEEETAGVENVKSQTYSKDLLG
QQPHSEPGAAAFGELQNQMPGPSKEEQSLPAGAQEALSDGLQLEVQPSEEEARGYIVTDRDPLRPEEGRRLVEDVARLLQVPSSAFADVE
DLSCNKIRYIERQTFESLPFLQYINLGCNLITKLSLGTFQAWHGMQFLHNLILNRNPLTTVEDPYLFELPALKYLDMGTTHITLTTLKNI
LTMTVELEKLILPSHMACCLCQFKNSIEAVCKTVKLHCNTACLTNSIHCPEEASVGNPEGAFMKMLQARKQHMSTQLTIESEAPSDSSGI
NLSGFGGDQLEIQLTEQLRSLIPNEDVRKFMSHVIRTLKMECSETHVQGSCAKLMLRTGLLMKLLSEQQEAKALNVEWDTDQQKTNYINE

--------------------------------------------------------------
>In-frame_ENST00000389416_ENST00000327564_TCGA-BK-A139-02A_PTPRN2_chr7_157903521_-_LRRC37B_chr17_30357675_length(transcript)=2831nt_BP=1634nt
CCGCGCGGCCATGGACTGAGCGCCGCCGGCCAGGCCGCGGGGATGGGGCCGCCGCTCCCGCTGCTGCTGCTGCTACTGCTGCTGCTGCCG
CCACGCGTCCTGCCTGCCGCCCCTTCGTCCGTCCCCCGCGGCCGGCAGCTCCCGGGGCGTCTGGATGGAGTGTTTGGAAGGTGCCAGAAG
GTTCCGGCAATGGACTTTTACCGCTACGAGGTGTCGCCCGTGGCCCTGCAGCGCCTGCGCGTGGCGTTGCAGAAGCTTTCCGGCACAGGT
TTCACGTGGCAGGATGACTATACTCAGTATGTGATGGACCAGGAACTTGCAGACCTCCCGAAAACCTACCTGAGGCGTCCTGAAGCATCC
AGCCCAGCCAGGCCCTCAAAACACAGCGTTGGCAGCGAGAGGAGGTACAGTCGGGAGGGCGGTGCTGCCCTGGCCAACGCCCTCCGACGC
CACCTGCCCTTCCTGGAGGCCCTGTCCCAGGCCCCAGCCTCAGACGTGCTCGCCAGGACCCATACGGCGCAGGACAGACCCCCCGCTGAG
GGTGATGACCGCTTCTCCGAGAGCATCCTGACCTATGTGGCCCACACGTCTGCGCTGACCTACCCTCCCGGGTCCCGGACCCAGCTCCGC
GAGGACCTCCTGCCGCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAGCCCTAAGGTGGACAGTGGTGTGGACAGACACCATCTGATG
GCGGCCCTCAGTGCCTATGCTGCCCAGAGGCCCCCAGCTCCCCCCGGGGAGGGCAGCCTGGAGCCACAGTACCTTCTGCGTGCACCCTCA
AGAATGCCCAGGCCTTTGCTGGCACCAGCCGCCCCCCAGAAGTGGCCTTCACCTCTGGGAGATTCCGAAGACCCCTCCAGCACAGGCGAT
GGAGCACGGATTCATACCCTCCTGAAGGACCTGCAGAGGCAGCCGGCTGAGGTGAGGGGCCTGAGTGGCCTGGAGCTGGACGGCATGGCT
GAGCTGATGGCTGGCCTGATGCAAGGCGTGGACCATGGAGTAGCTCGAGGCAGCCCTGGGAGAGCGGCCCTGGGAGAGTCTGGAGAACAG
GCGGATGGCCCCAAGGCCACCCTCCGTGGAGACAGCTTTCCAGATGACGGAGTGCAGGACGACGATGATAGACTTTACCAAGAGGTCCAT
CGTCTGAGTGCCACACTCGGGGGCCTCCTGCAGGACCACGGGTCTCGACTCTTACCTGGAGCCCTCCCCTTTGCAAGGCCCCTCGACATG
GAGAGGAAGAAGTCCGAGCACCCTGAGTCTTCCCTGTCTTCAGAAGAGGAGACTGCCGGAGTGGAGAACGTCAAGAGCCAGACGTATTCC
AAAGATCTGCTGGGGCAGCAGCCGCATTCGGAGCCCGGGGCCGCTGCGTTTGGGGAGCTCCAAAACCAGATGCCTGGGCCCTCGAAGGAG
GAGCAGAGCCTTCCAGCGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCCTTCCGAGGAAGAGGCGCGGGGCTAC
ATCGTGACAGACAGAGACCCCCTGCGCCCCGAGGAAGGAAGGCGGCTGGTGGAGGACGTCGCCCGCCTCCTGCAGGTGCCCAGCAGTGCG
TTCGCTGACGTGGAAGATTTATCCTGCAATAAAATACGATATATTGAAAGACAAACATTTGAATCACTACCATTTTTGCAGTATATAAAT
CTGGGCTGCAATTTAATTACAAAACTGAGCCTTGGAACATTTCAGGCCTGGCACGGAATGCAGTTTTTACACAACTTAATTCTCAATCGC
AATCCTCTGACTACTGTCGAAGATCCATATCTCTTTGAACTGCCGGCATTAAAATATCTAGACATGGGAACAACACACATCACACTTACA
ACACTTAAGAACATTCTCACGATGACTGTTGAACTGGAAAAACTGATCTTACCTAGCCATATGGCCTGCTGCCTCTGCCAATTTAAAAAT
AGCATTGAGGCTGTCTGCAAGACAGTCAAGCTGCATTGCAACACTGCATGTCTGACTAACAGCATACATTGTCCTGAAGAAGCATCTGTA
GGGAATCCAGAAGGAGCGTTCATGAAGATGTTACAAGCCCGGAAGCAGCACATGAGCACTCAGCTGACTATTGAGTCGGAGGCGCCCTCA
GACAGCAGTGGCATCAACTTGTCAGGCTTTGGGGGTGATCAGCTTGAAATTCAGCTAACCGAGCAGCTACGGTCCCTCATCCCCAACGAG
GATGTGAGAAAGTTCATGTCTCATGTTATCCGGACCTTGAAAATGGAATGTTCAGAAACACATGTGCAAGGGAGCTGTGCCAAGCTCATG
TTGCGAACAGGCCTCCTGATGAAGCTTCTCAGCGAGCAGCAGGAAGCAAAGGCATTGAATGTAGAATGGGATACGGACCAACAAAAAACA
AATTATATTAATGAGAACATGGAACAGAATGAACAGAAAGAGCAGAAGTCAAGTGAGCTCATGAAAGAAGTTCCAGGAGATGACTATAAG
AACAAACTCATCTTCGCAATATCTGTGACTGTAATACTAATAATTTTGATTATAATTTTTTGTCTTATAGAGGTGAATTCACATAAAAGG
GCATCAGAAAAATACAAAGACAACCCATCAATATCAGGAGCCTGAGCATGAGTTAAAGCATGTGGATGGCCTGGAGCTATGTTTTTAAAA
TTGTTATTAAATATTGGTTTTTTACTTAAATCAATGAAAACTTTCTTTACTTTGTGGTTGTGTTCCTCAAAATGAGAATTTTTAACAATA

>In-frame_ENST00000389416_ENST00000327564_TCGA-BK-A139-02A_PTPRN2_chr7_157903521_-_LRRC37B_chr17_30357675_length(amino acids)=879AA_start in transcript=15_stop in transcript=2654
MSAAGQAAGMGPPLPLLLLLLLLLPPRVLPAAPSSVPRGRQLPGRLDGVFGRCQKVPAMDFYRYEVSPVALQRLRVALQKLSGTGFTWQD
DYTQYVMDQELADLPKTYLRRPEASSPARPSKHSVGSERRYSREGGAALANALRRHLPFLEALSQAPASDVLARTHTAQDRPPAEGDDRF
SESILTYVAHTSALTYPPGSRTQLREDLLPRTLGQLQPDELSPKVDSGVDRHHLMAALSAYAAQRPPAPPGEGSLEPQYLLRAPSRMPRP
LLAPAAPQKWPSPLGDSEDPSSTGDGARIHTLLKDLQRQPAEVRGLSGLELDGMAELMAGLMQGVDHGVARGSPGRAALGESGEQADGPK
ATLRGDSFPDDGVQDDDDRLYQEVHRLSATLGGLLQDHGSRLLPGALPFARPLDMERKKSEHPESSLSSEEETAGVENVKSQTYSKDLLG
QQPHSEPGAAAFGELQNQMPGPSKEEQSLPAGAQEALSDGLQLEVQPSEEEARGYIVTDRDPLRPEEGRRLVEDVARLLQVPSSAFADVE
DLSCNKIRYIERQTFESLPFLQYINLGCNLITKLSLGTFQAWHGMQFLHNLILNRNPLTTVEDPYLFELPALKYLDMGTTHITLTTLKNI
LTMTVELEKLILPSHMACCLCQFKNSIEAVCKTVKLHCNTACLTNSIHCPEEASVGNPEGAFMKMLQARKQHMSTQLTIESEAPSDSSGI
NLSGFGGDQLEIQLTEQLRSLIPNEDVRKFMSHVIRTLKMECSETHVQGSCAKLMLRTGLLMKLLSEQQEAKALNVEWDTDQQKTNYINE

--------------------------------------------------------------
>In-frame_ENST00000389418_ENST00000543378_TCGA-BK-A139-02A_PTPRN2_chr7_157903521_-_LRRC37B_chr17_30357675_length(transcript)=2832nt_BP=1653nt
GGCCGCGGGGATGGGGCCGCCGCTCCCGCTGCTGCTGCTGCTACTGCTGCTGCTGCCGCCACGCGTCCTGCCTGCCGCCCCTTCGTCCGT
CCCCCGCGGCCGGCAGCTCCCGGGGCGTCTGGGCTGCCTGCTCGAGGAGGGCCTCTGCGGAGCGTCCGAGGCCTGTGTGAACGATGGAGT
GTTTGGAAGGTGCCAGAAGGTTCCGGCAATGGACTTTTACCGCTACGAGGTGTCGCCCGTGGCCCTGCAGCGCCTGCGCGTGGCGTTGCA
GAAGCTTTCCGGCACAGGTTTCACGTGGCAGGATGACTATACTCAGTATGTGATGGACCAGGAACTTGCAGACCTCCCGAAAACCTACCT
GAGGCGTCCTGAAGCATCCAGCCCAGCCAGGCCCTCAAAACACAGCGTTGGCAGCGAGAGGAGGTACAGTCGGGAGGGCGGTGCTGCCCT
GGCCAACGCCCTCCGACGCCACCTGCCCTTCCTGGAGGCCCTGTCCCAGGCCCCAGCCTCAGACGTGCTCGCCAGGACCCATACGGCGCA
GGACAGACCCCCCGCTGAGGGTGATGACCGCTTCTCCGAGAGCATCCTGACCTATGTGGCCCACACGTCTGCGCTGACCTACCCTCCCGG
GTCCCGGACCCAGCTCCGCGAGGACCTCCTGCCGCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAGCCCTAAGGTGGACAGTGGTGT
GGACAGACACCATCTGATGGCGGCCCTCAGTGCCTATGCTGCCCAGAGGCCCCCAGCTCCCCCCGGGGAGGGCAGCCTGGAGCCACAGTA
CCTTCTGCGTGCACCCTCAAGAATGCCCAGGCCTTTGCTGGCACCAGCCGCCCCCCAGAAGTGGCCTTCACCTCTGGGAGATTCCGAAGA
CCCCTCCAGCACAGGCGATGGAGCACGGATTCATACCCTCCTGAAGGACCTGCAGAGGCAGCCGGCTGAGGTGAGGGGCCTGAGTGGCCT
GGAGCTGGACGGCATGGCTGAGCTGATGGCTGGCCTGATGCAAGGCGTGGACCATGGAGTAGCTCGAGGCAGCCCTGGGAGAGCGGCCCT
GGGAGAGTCTGGAGAACAGGCGGATGGCCCCAAGGCCACCCTCCGTGGAGACAGCTTTCCAGATGACGGAGTGCAGGACGACGATGATAG
ACTTTACCAAGAGGTCCATCGTCTGAGTGCCACACTCGGGGGCCTCCTGCAGGACCACGGGTCTCGACTCTTACCTGGAGCCCTCCCCTT
TGCAAGGCCCCTCGACATGGAGAGGAAGAAGTCCGAGCACCCTGAGTCTTCCCTGTCTTCAGAAGAGGAGACTGCCGGAGTGGAGAACGT
CAAGAGCCAGACGTATTCCAAAGATCTGCTGGGGCAGCAGCCGCATTCGGAGCCCGGGGCCGCTGCGTTTGGGGAGCTCCAAAACCAGAT
GCCTGGGCCCTCGAAGGAGGAGCAGAGCCTTCCAGCGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCCTTCCGA
GGAAGAGGCGCGGGGCTACATCGTGACAGACAGAGACCCCCTGCGCCCCGAGGAAGGAAGGCGGCTGGTGGAGGACGTCGCCCGCCTCCT
GCAGGTGCCCAGCAGTGCGTTCGCTGACGTGGAAGATTTATCCTGCAATAAAATACGATATATTGAAAGACAAACATTTGAATCACTACC
ATTTTTGCAGTATATAAATCTGGGCTGCAATTTAATTACAAAACTGAGCCTTGGAACATTTCAGGCCTGGCACGGAATGCAGTTTTTACA
CAACTTAATTCTCAATCGCAATCCTCTGACTACTGTCGAAGATCCATATCTCTTTGAACTGCCGGCATTAAAATATCTAGACATGGGAAC
AACACACATCACACTTACAACACTTAAGAACATTCTCACGATGACTGTTGAACTGGAAAAACTGATCTTACCTAGCCATATGGCCTGCTG
CCTCTGCCAATTTAAAAATAGCATTGAGGCTGTCTGCAAGACAGTCAAGCTGCATTGCAACACTGCATGTCTGACTAACAGCATACATTG
TCCTGAAGAAGCATCTGTAGGGAATCCAGAAGGAGCGTTCATGAAGATGTTACAAGCCCGGAAGCAGCACATGAGCACTCAGCTGACTAT
TGAGTCGGAGGCGCCCTCAGACAGCAGTGGCATCAACTTGTCAGGCTTTGGGGGTGATCAGCTTGAAATTCAGCTAACCGAGCAGCTACG
GTCCCTCATCCCCAACGAGGATGTGAGAAAGTTCATGTCTCATGTTATCCGGACCTTGAAAATGGAATGTTCAGAAACACATGTGCAAGG
GAGCTGTGCCAAGCTCATGTTGCGAACAGGCCTCCTGATGAAGCTTCTCAGCGAGCAGCAGGAAGCAAAGGCATTGAATGTAGAATGGGA
TACGGACCAACAAAAAACAAATTATATTAATGAGAACATGGAACAGAATGAACAGAAAGAGCAGAAGTCAAGTGAGCTCATGAAAGAAGT
TCCAGGAGATGACTATAAGAACAAACTCATCTTCGCAATATCTGTGACTGTAATACTAATAATTTTGATTATAATTTTTTGTCTTATAGA
GGTGAATTCACATAAAAGGGCATCAGAAAAATACAAAGACAACCCATCAATATCAGGAGCCTGAGCATGAGTTAAAGCATGTGGATGGCC
TGGAGCTATGTTTTTAAAATTGTTATTAAATATTGGTTTTTTACTTAAATCAATGAAAACTTTCTTTACTTTGTGGTTGTGTTCCTCAAA

>In-frame_ENST00000389418_ENST00000543378_TCGA-BK-A139-02A_PTPRN2_chr7_157903521_-_LRRC37B_chr17_30357675_length(amino acids)=887AA_start in transcript=10_stop in transcript=2673
MGPPLPLLLLLLLLLPPRVLPAAPSSVPRGRQLPGRLGCLLEEGLCGASEACVNDGVFGRCQKVPAMDFYRYEVSPVALQRLRVALQKLS
GTGFTWQDDYTQYVMDQELADLPKTYLRRPEASSPARPSKHSVGSERRYSREGGAALANALRRHLPFLEALSQAPASDVLARTHTAQDRP
PAEGDDRFSESILTYVAHTSALTYPPGSRTQLREDLLPRTLGQLQPDELSPKVDSGVDRHHLMAALSAYAAQRPPAPPGEGSLEPQYLLR
APSRMPRPLLAPAAPQKWPSPLGDSEDPSSTGDGARIHTLLKDLQRQPAEVRGLSGLELDGMAELMAGLMQGVDHGVARGSPGRAALGES
GEQADGPKATLRGDSFPDDGVQDDDDRLYQEVHRLSATLGGLLQDHGSRLLPGALPFARPLDMERKKSEHPESSLSSEEETAGVENVKSQ
TYSKDLLGQQPHSEPGAAAFGELQNQMPGPSKEEQSLPAGAQEALSDGLQLEVQPSEEEARGYIVTDRDPLRPEEGRRLVEDVARLLQVP
SSAFADVEDLSCNKIRYIERQTFESLPFLQYINLGCNLITKLSLGTFQAWHGMQFLHNLILNRNPLTTVEDPYLFELPALKYLDMGTTHI
TLTTLKNILTMTVELEKLILPSHMACCLCQFKNSIEAVCKTVKLHCNTACLTNSIHCPEEASVGNPEGAFMKMLQARKQHMSTQLTIESE
APSDSSGINLSGFGGDQLEIQLTEQLRSLIPNEDVRKFMSHVIRTLKMECSETHVQGSCAKLMLRTGLLMKLLSEQQEAKALNVEWDTDQ

--------------------------------------------------------------
>In-frame_ENST00000389418_ENST00000327564_TCGA-BK-A139-02A_PTPRN2_chr7_157903521_-_LRRC37B_chr17_30357675_length(transcript)=2850nt_BP=1653nt
GGCCGCGGGGATGGGGCCGCCGCTCCCGCTGCTGCTGCTGCTACTGCTGCTGCTGCCGCCACGCGTCCTGCCTGCCGCCCCTTCGTCCGT
CCCCCGCGGCCGGCAGCTCCCGGGGCGTCTGGGCTGCCTGCTCGAGGAGGGCCTCTGCGGAGCGTCCGAGGCCTGTGTGAACGATGGAGT
GTTTGGAAGGTGCCAGAAGGTTCCGGCAATGGACTTTTACCGCTACGAGGTGTCGCCCGTGGCCCTGCAGCGCCTGCGCGTGGCGTTGCA
GAAGCTTTCCGGCACAGGTTTCACGTGGCAGGATGACTATACTCAGTATGTGATGGACCAGGAACTTGCAGACCTCCCGAAAACCTACCT
GAGGCGTCCTGAAGCATCCAGCCCAGCCAGGCCCTCAAAACACAGCGTTGGCAGCGAGAGGAGGTACAGTCGGGAGGGCGGTGCTGCCCT
GGCCAACGCCCTCCGACGCCACCTGCCCTTCCTGGAGGCCCTGTCCCAGGCCCCAGCCTCAGACGTGCTCGCCAGGACCCATACGGCGCA
GGACAGACCCCCCGCTGAGGGTGATGACCGCTTCTCCGAGAGCATCCTGACCTATGTGGCCCACACGTCTGCGCTGACCTACCCTCCCGG
GTCCCGGACCCAGCTCCGCGAGGACCTCCTGCCGCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAGCCCTAAGGTGGACAGTGGTGT
GGACAGACACCATCTGATGGCGGCCCTCAGTGCCTATGCTGCCCAGAGGCCCCCAGCTCCCCCCGGGGAGGGCAGCCTGGAGCCACAGTA
CCTTCTGCGTGCACCCTCAAGAATGCCCAGGCCTTTGCTGGCACCAGCCGCCCCCCAGAAGTGGCCTTCACCTCTGGGAGATTCCGAAGA
CCCCTCCAGCACAGGCGATGGAGCACGGATTCATACCCTCCTGAAGGACCTGCAGAGGCAGCCGGCTGAGGTGAGGGGCCTGAGTGGCCT
GGAGCTGGACGGCATGGCTGAGCTGATGGCTGGCCTGATGCAAGGCGTGGACCATGGAGTAGCTCGAGGCAGCCCTGGGAGAGCGGCCCT
GGGAGAGTCTGGAGAACAGGCGGATGGCCCCAAGGCCACCCTCCGTGGAGACAGCTTTCCAGATGACGGAGTGCAGGACGACGATGATAG
ACTTTACCAAGAGGTCCATCGTCTGAGTGCCACACTCGGGGGCCTCCTGCAGGACCACGGGTCTCGACTCTTACCTGGAGCCCTCCCCTT
TGCAAGGCCCCTCGACATGGAGAGGAAGAAGTCCGAGCACCCTGAGTCTTCCCTGTCTTCAGAAGAGGAGACTGCCGGAGTGGAGAACGT
CAAGAGCCAGACGTATTCCAAAGATCTGCTGGGGCAGCAGCCGCATTCGGAGCCCGGGGCCGCTGCGTTTGGGGAGCTCCAAAACCAGAT
GCCTGGGCCCTCGAAGGAGGAGCAGAGCCTTCCAGCGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCCTTCCGA
GGAAGAGGCGCGGGGCTACATCGTGACAGACAGAGACCCCCTGCGCCCCGAGGAAGGAAGGCGGCTGGTGGAGGACGTCGCCCGCCTCCT
GCAGGTGCCCAGCAGTGCGTTCGCTGACGTGGAAGATTTATCCTGCAATAAAATACGATATATTGAAAGACAAACATTTGAATCACTACC
ATTTTTGCAGTATATAAATCTGGGCTGCAATTTAATTACAAAACTGAGCCTTGGAACATTTCAGGCCTGGCACGGAATGCAGTTTTTACA
CAACTTAATTCTCAATCGCAATCCTCTGACTACTGTCGAAGATCCATATCTCTTTGAACTGCCGGCATTAAAATATCTAGACATGGGAAC
AACACACATCACACTTACAACACTTAAGAACATTCTCACGATGACTGTTGAACTGGAAAAACTGATCTTACCTAGCCATATGGCCTGCTG
CCTCTGCCAATTTAAAAATAGCATTGAGGCTGTCTGCAAGACAGTCAAGCTGCATTGCAACACTGCATGTCTGACTAACAGCATACATTG
TCCTGAAGAAGCATCTGTAGGGAATCCAGAAGGAGCGTTCATGAAGATGTTACAAGCCCGGAAGCAGCACATGAGCACTCAGCTGACTAT
TGAGTCGGAGGCGCCCTCAGACAGCAGTGGCATCAACTTGTCAGGCTTTGGGGGTGATCAGCTTGAAATTCAGCTAACCGAGCAGCTACG
GTCCCTCATCCCCAACGAGGATGTGAGAAAGTTCATGTCTCATGTTATCCGGACCTTGAAAATGGAATGTTCAGAAACACATGTGCAAGG
GAGCTGTGCCAAGCTCATGTTGCGAACAGGCCTCCTGATGAAGCTTCTCAGCGAGCAGCAGGAAGCAAAGGCATTGAATGTAGAATGGGA
TACGGACCAACAAAAAACAAATTATATTAATGAGAACATGGAACAGAATGAACAGAAAGAGCAGAAGTCAAGTGAGCTCATGAAAGAAGT
TCCAGGAGATGACTATAAGAACAAACTCATCTTCGCAATATCTGTGACTGTAATACTAATAATTTTGATTATAATTTTTTGTCTTATAGA
GGTGAATTCACATAAAAGGGCATCAGAAAAATACAAAGACAACCCATCAATATCAGGAGCCTGAGCATGAGTTAAAGCATGTGGATGGCC
TGGAGCTATGTTTTTAAAATTGTTATTAAATATTGGTTTTTTACTTAAATCAATGAAAACTTTCTTTACTTTGTGGTTGTGTTCCTCAAA

>In-frame_ENST00000389418_ENST00000327564_TCGA-BK-A139-02A_PTPRN2_chr7_157903521_-_LRRC37B_chr17_30357675_length(amino acids)=887AA_start in transcript=10_stop in transcript=2673
MGPPLPLLLLLLLLLPPRVLPAAPSSVPRGRQLPGRLGCLLEEGLCGASEACVNDGVFGRCQKVPAMDFYRYEVSPVALQRLRVALQKLS
GTGFTWQDDYTQYVMDQELADLPKTYLRRPEASSPARPSKHSVGSERRYSREGGAALANALRRHLPFLEALSQAPASDVLARTHTAQDRP
PAEGDDRFSESILTYVAHTSALTYPPGSRTQLREDLLPRTLGQLQPDELSPKVDSGVDRHHLMAALSAYAAQRPPAPPGEGSLEPQYLLR
APSRMPRPLLAPAAPQKWPSPLGDSEDPSSTGDGARIHTLLKDLQRQPAEVRGLSGLELDGMAELMAGLMQGVDHGVARGSPGRAALGES
GEQADGPKATLRGDSFPDDGVQDDDDRLYQEVHRLSATLGGLLQDHGSRLLPGALPFARPLDMERKKSEHPESSLSSEEETAGVENVKSQ
TYSKDLLGQQPHSEPGAAAFGELQNQMPGPSKEEQSLPAGAQEALSDGLQLEVQPSEEEARGYIVTDRDPLRPEEGRRLVEDVARLLQVP
SSAFADVEDLSCNKIRYIERQTFESLPFLQYINLGCNLITKLSLGTFQAWHGMQFLHNLILNRNPLTTVEDPYLFELPALKYLDMGTTHI
TLTTLKNILTMTVELEKLILPSHMACCLCQFKNSIEAVCKTVKLHCNTACLTNSIHCPEEASVGNPEGAFMKMLQARKQHMSTQLTIESE
APSDSSGINLSGFGGDQLEIQLTEQLRSLIPNEDVRKFMSHVIRTLKMECSETHVQGSCAKLMLRTGLLMKLLSEQQEAKALNVEWDTDQ

--------------------------------------------------------------
>In-frame_ENST00000404321_ENST00000543378_TCGA-BK-A139-02A_PTPRN2_chr7_157903521_-_LRRC37B_chr17_30357675_length(transcript)=2891nt_BP=1712nt
ATGGCTGTGGAATCTGAATATTCACTGCTGAGAACCGAAGCCAGCTTTCCTACTATGAAGATGTTCTGTGTGAGCCACACCTTGCCCAGG
GTGGAAGTGATGTTTGTTTCAGGTCCACAGACGAGGGAGAGGACGGAGCCAGTGGACCCTCGGTGGCAGTGTCTGGTGCAGATGTGGGCA
GGCTGCCTGCTCGAGGAGGGCCTCTGCGGAGCGTCCGAGGCCTGTGTGAACGATGGAGTGTTTGGAAGGTGCCAGAAGGTTCCGGCAATG
GACTTTTACCGCTACGAGGTGTCGCCCGTGGCCCTGCAGCGCCTGCGCGTGGCGTTGCAGAAGCTTTCCGGCACAGGTTTCACGTGGCAG
GATGACTATACTCAGTATGTGATGGACCAGGAACTTGCAGACCTCCCGAAAACCTACCTGAGGCGTCCTGAAGCATCCAGCCCAGCCAGG
CCCTCAAAACACAGCGTTGGCAGCGAGAGGAGGTACAGTCGGGAGGGCGGTGCTGCCCTGGCCAACGCCCTCCGACGCCACCTGCCCTTC
CTGGAGGCCCTGTCCCAGGCCCCAGCCTCAGACGTGCTCGCCAGGACCCATACGGCGCAGGACAGACCCCCCGCTGAGGGTGATGACCGC
TTCTCCGAGAGCATCCTGACCTATGTGGCCCACACGTCTGCGCTGACCTACCCTCCCGGGTCCCGGACCCAGCTCCGCGAGGACCTCCTG
CCGCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAGCCCTAAGGTGGACAGTGGTGTGGACAGACACCATCTGATGGCGGCCCTCAGT
GCCTATGCTGCCCAGAGGCCCCCAGCTCCCCCCGGGGAGGGCAGCCTGGAGCCACAGTACCTTCTGCGTGCACCCTCAAGAATGCCCAGG
CCTTTGCTGGCACCAGCCGCCCCCCAGAAGTGGCCTTCACCTCTGGGAGATTCCGAAGACCCCTCCAGCACAGGCGATGGAGCACGGATT
CATACCCTCCTGAAGGACCTGCAGAGGCAGCCGGCTGAGGTGAGGGGCCTGAGTGGCCTGGAGCTGGACGGCATGGCTGAGCTGATGGCT
GGCCTGATGCAAGGCGTGGACCATGGAGTAGCTCGAGGCAGCCCTGGGAGAGCGGCCCTGGGAGAGTCTGGAGAACAGGCGGATGGCCCC
AAGGCCACCCTCCGTGGAGACAGCTTTCCAGATGACGGAGTGCAGGACGACGATGATAGACTTTACCAAGAGGTCCATCGTCTGAGTGCC
ACACTCGGGGGCCTCCTGCAGGACCACGGGTCTCGACTCTTACCTGGAGCCCTCCCCTTTGCAAGGCCCCTCGACATGGAGAGGAAGAAG
TCCGAGCACCCTGAGTCTTCCCTGTCTTCAGAAGAGGAGACTGCCGGAGTGGAGAACGTCAAGAGCCAGACGTATTCCAAAGATCTGCTG
GGGCAGCAGCCGCATTCGGAGCCCGGGGCCGCTGCGTTTGGGGAGCTCCAAAACCAGATGCCTGGGCCCTCGAAGGAGGAGCAGAGCCTT
CCAGCGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCCTTCCGAGGAAGAGGCGCGGGGCTACATCGTGACAGAC
AGAGACCCCCTGCGCCCCGAGGAAGGAAGGCGGCTGGTGGAGGACGTCGCCCGCCTCCTGCAGGTGCCCAGCAGTGCGTTCGCTGACGTG
GAAGATTTATCCTGCAATAAAATACGATATATTGAAAGACAAACATTTGAATCACTACCATTTTTGCAGTATATAAATCTGGGCTGCAAT
TTAATTACAAAACTGAGCCTTGGAACATTTCAGGCCTGGCACGGAATGCAGTTTTTACACAACTTAATTCTCAATCGCAATCCTCTGACT
ACTGTCGAAGATCCATATCTCTTTGAACTGCCGGCATTAAAATATCTAGACATGGGAACAACACACATCACACTTACAACACTTAAGAAC
ATTCTCACGATGACTGTTGAACTGGAAAAACTGATCTTACCTAGCCATATGGCCTGCTGCCTCTGCCAATTTAAAAATAGCATTGAGGCT
GTCTGCAAGACAGTCAAGCTGCATTGCAACACTGCATGTCTGACTAACAGCATACATTGTCCTGAAGAAGCATCTGTAGGGAATCCAGAA
GGAGCGTTCATGAAGATGTTACAAGCCCGGAAGCAGCACATGAGCACTCAGCTGACTATTGAGTCGGAGGCGCCCTCAGACAGCAGTGGC
ATCAACTTGTCAGGCTTTGGGGGTGATCAGCTTGAAATTCAGCTAACCGAGCAGCTACGGTCCCTCATCCCCAACGAGGATGTGAGAAAG
TTCATGTCTCATGTTATCCGGACCTTGAAAATGGAATGTTCAGAAACACATGTGCAAGGGAGCTGTGCCAAGCTCATGTTGCGAACAGGC
CTCCTGATGAAGCTTCTCAGCGAGCAGCAGGAAGCAAAGGCATTGAATGTAGAATGGGATACGGACCAACAAAAAACAAATTATATTAAT
GAGAACATGGAACAGAATGAACAGAAAGAGCAGAAGTCAAGTGAGCTCATGAAAGAAGTTCCAGGAGATGACTATAAGAACAAACTCATC
TTCGCAATATCTGTGACTGTAATACTAATAATTTTGATTATAATTTTTTGTCTTATAGAGGTGAATTCACATAAAAGGGCATCAGAAAAA
TACAAAGACAACCCATCAATATCAGGAGCCTGAGCATGAGTTAAAGCATGTGGATGGCCTGGAGCTATGTTTTTAAAATTGTTATTAAAT
ATTGGTTTTTTACTTAAATCAATGAAAACTTTCTTTACTTTGTGGTTGTGTTCCTCAAAATGAGAATTTTTAACAATAATAAAAATAAAG

>In-frame_ENST00000404321_ENST00000543378_TCGA-BK-A139-02A_PTPRN2_chr7_157903521_-_LRRC37B_chr17_30357675_length(amino acids)=910AA_start in transcript=0_stop in transcript=2732
MAVESEYSLLRTEASFPTMKMFCVSHTLPRVEVMFVSGPQTRERTEPVDPRWQCLVQMWAGCLLEEGLCGASEACVNDGVFGRCQKVPAM
DFYRYEVSPVALQRLRVALQKLSGTGFTWQDDYTQYVMDQELADLPKTYLRRPEASSPARPSKHSVGSERRYSREGGAALANALRRHLPF
LEALSQAPASDVLARTHTAQDRPPAEGDDRFSESILTYVAHTSALTYPPGSRTQLREDLLPRTLGQLQPDELSPKVDSGVDRHHLMAALS
AYAAQRPPAPPGEGSLEPQYLLRAPSRMPRPLLAPAAPQKWPSPLGDSEDPSSTGDGARIHTLLKDLQRQPAEVRGLSGLELDGMAELMA
GLMQGVDHGVARGSPGRAALGESGEQADGPKATLRGDSFPDDGVQDDDDRLYQEVHRLSATLGGLLQDHGSRLLPGALPFARPLDMERKK
SEHPESSLSSEEETAGVENVKSQTYSKDLLGQQPHSEPGAAAFGELQNQMPGPSKEEQSLPAGAQEALSDGLQLEVQPSEEEARGYIVTD
RDPLRPEEGRRLVEDVARLLQVPSSAFADVEDLSCNKIRYIERQTFESLPFLQYINLGCNLITKLSLGTFQAWHGMQFLHNLILNRNPLT
TVEDPYLFELPALKYLDMGTTHITLTTLKNILTMTVELEKLILPSHMACCLCQFKNSIEAVCKTVKLHCNTACLTNSIHCPEEASVGNPE
GAFMKMLQARKQHMSTQLTIESEAPSDSSGINLSGFGGDQLEIQLTEQLRSLIPNEDVRKFMSHVIRTLKMECSETHVQGSCAKLMLRTG
LLMKLLSEQQEAKALNVEWDTDQQKTNYINENMEQNEQKEQKSSELMKEVPGDDYKNKLIFAISVTVILIILIIIFCLIEVNSHKRASEK

--------------------------------------------------------------
>In-frame_ENST00000404321_ENST00000327564_TCGA-BK-A139-02A_PTPRN2_chr7_157903521_-_LRRC37B_chr17_30357675_length(transcript)=2909nt_BP=1712nt
ATGGCTGTGGAATCTGAATATTCACTGCTGAGAACCGAAGCCAGCTTTCCTACTATGAAGATGTTCTGTGTGAGCCACACCTTGCCCAGG
GTGGAAGTGATGTTTGTTTCAGGTCCACAGACGAGGGAGAGGACGGAGCCAGTGGACCCTCGGTGGCAGTGTCTGGTGCAGATGTGGGCA
GGCTGCCTGCTCGAGGAGGGCCTCTGCGGAGCGTCCGAGGCCTGTGTGAACGATGGAGTGTTTGGAAGGTGCCAGAAGGTTCCGGCAATG
GACTTTTACCGCTACGAGGTGTCGCCCGTGGCCCTGCAGCGCCTGCGCGTGGCGTTGCAGAAGCTTTCCGGCACAGGTTTCACGTGGCAG
GATGACTATACTCAGTATGTGATGGACCAGGAACTTGCAGACCTCCCGAAAACCTACCTGAGGCGTCCTGAAGCATCCAGCCCAGCCAGG
CCCTCAAAACACAGCGTTGGCAGCGAGAGGAGGTACAGTCGGGAGGGCGGTGCTGCCCTGGCCAACGCCCTCCGACGCCACCTGCCCTTC
CTGGAGGCCCTGTCCCAGGCCCCAGCCTCAGACGTGCTCGCCAGGACCCATACGGCGCAGGACAGACCCCCCGCTGAGGGTGATGACCGC
TTCTCCGAGAGCATCCTGACCTATGTGGCCCACACGTCTGCGCTGACCTACCCTCCCGGGTCCCGGACCCAGCTCCGCGAGGACCTCCTG
CCGCGGACCCTCGGCCAGCTCCAGCCAGATGAGCTCAGCCCTAAGGTGGACAGTGGTGTGGACAGACACCATCTGATGGCGGCCCTCAGT
GCCTATGCTGCCCAGAGGCCCCCAGCTCCCCCCGGGGAGGGCAGCCTGGAGCCACAGTACCTTCTGCGTGCACCCTCAAGAATGCCCAGG
CCTTTGCTGGCACCAGCCGCCCCCCAGAAGTGGCCTTCACCTCTGGGAGATTCCGAAGACCCCTCCAGCACAGGCGATGGAGCACGGATT
CATACCCTCCTGAAGGACCTGCAGAGGCAGCCGGCTGAGGTGAGGGGCCTGAGTGGCCTGGAGCTGGACGGCATGGCTGAGCTGATGGCT
GGCCTGATGCAAGGCGTGGACCATGGAGTAGCTCGAGGCAGCCCTGGGAGAGCGGCCCTGGGAGAGTCTGGAGAACAGGCGGATGGCCCC
AAGGCCACCCTCCGTGGAGACAGCTTTCCAGATGACGGAGTGCAGGACGACGATGATAGACTTTACCAAGAGGTCCATCGTCTGAGTGCC
ACACTCGGGGGCCTCCTGCAGGACCACGGGTCTCGACTCTTACCTGGAGCCCTCCCCTTTGCAAGGCCCCTCGACATGGAGAGGAAGAAG
TCCGAGCACCCTGAGTCTTCCCTGTCTTCAGAAGAGGAGACTGCCGGAGTGGAGAACGTCAAGAGCCAGACGTATTCCAAAGATCTGCTG
GGGCAGCAGCCGCATTCGGAGCCCGGGGCCGCTGCGTTTGGGGAGCTCCAAAACCAGATGCCTGGGCCCTCGAAGGAGGAGCAGAGCCTT
CCAGCGGGTGCTCAGGAGGCCCTCAGCGACGGCCTGCAATTGGAGGTCCAGCCTTCCGAGGAAGAGGCGCGGGGCTACATCGTGACAGAC
AGAGACCCCCTGCGCCCCGAGGAAGGAAGGCGGCTGGTGGAGGACGTCGCCCGCCTCCTGCAGGTGCCCAGCAGTGCGTTCGCTGACGTG
GAAGATTTATCCTGCAATAAAATACGATATATTGAAAGACAAACATTTGAATCACTACCATTTTTGCAGTATATAAATCTGGGCTGCAAT
TTAATTACAAAACTGAGCCTTGGAACATTTCAGGCCTGGCACGGAATGCAGTTTTTACACAACTTAATTCTCAATCGCAATCCTCTGACT
ACTGTCGAAGATCCATATCTCTTTGAACTGCCGGCATTAAAATATCTAGACATGGGAACAACACACATCACACTTACAACACTTAAGAAC
ATTCTCACGATGACTGTTGAACTGGAAAAACTGATCTTACCTAGCCATATGGCCTGCTGCCTCTGCCAATTTAAAAATAGCATTGAGGCT
GTCTGCAAGACAGTCAAGCTGCATTGCAACACTGCATGTCTGACTAACAGCATACATTGTCCTGAAGAAGCATCTGTAGGGAATCCAGAA
GGAGCGTTCATGAAGATGTTACAAGCCCGGAAGCAGCACATGAGCACTCAGCTGACTATTGAGTCGGAGGCGCCCTCAGACAGCAGTGGC
ATCAACTTGTCAGGCTTTGGGGGTGATCAGCTTGAAATTCAGCTAACCGAGCAGCTACGGTCCCTCATCCCCAACGAGGATGTGAGAAAG
TTCATGTCTCATGTTATCCGGACCTTGAAAATGGAATGTTCAGAAACACATGTGCAAGGGAGCTGTGCCAAGCTCATGTTGCGAACAGGC
CTCCTGATGAAGCTTCTCAGCGAGCAGCAGGAAGCAAAGGCATTGAATGTAGAATGGGATACGGACCAACAAAAAACAAATTATATTAAT
GAGAACATGGAACAGAATGAACAGAAAGAGCAGAAGTCAAGTGAGCTCATGAAAGAAGTTCCAGGAGATGACTATAAGAACAAACTCATC
TTCGCAATATCTGTGACTGTAATACTAATAATTTTGATTATAATTTTTTGTCTTATAGAGGTGAATTCACATAAAAGGGCATCAGAAAAA
TACAAAGACAACCCATCAATATCAGGAGCCTGAGCATGAGTTAAAGCATGTGGATGGCCTGGAGCTATGTTTTTAAAATTGTTATTAAAT
ATTGGTTTTTTACTTAAATCAATGAAAACTTTCTTTACTTTGTGGTTGTGTTCCTCAAAATGAGAATTTTTAACAATAATAAAAATAAAG

>In-frame_ENST00000404321_ENST00000327564_TCGA-BK-A139-02A_PTPRN2_chr7_157903521_-_LRRC37B_chr17_30357675_length(amino acids)=910AA_start in transcript=0_stop in transcript=2732
MAVESEYSLLRTEASFPTMKMFCVSHTLPRVEVMFVSGPQTRERTEPVDPRWQCLVQMWAGCLLEEGLCGASEACVNDGVFGRCQKVPAM
DFYRYEVSPVALQRLRVALQKLSGTGFTWQDDYTQYVMDQELADLPKTYLRRPEASSPARPSKHSVGSERRYSREGGAALANALRRHLPF
LEALSQAPASDVLARTHTAQDRPPAEGDDRFSESILTYVAHTSALTYPPGSRTQLREDLLPRTLGQLQPDELSPKVDSGVDRHHLMAALS
AYAAQRPPAPPGEGSLEPQYLLRAPSRMPRPLLAPAAPQKWPSPLGDSEDPSSTGDGARIHTLLKDLQRQPAEVRGLSGLELDGMAELMA
GLMQGVDHGVARGSPGRAALGESGEQADGPKATLRGDSFPDDGVQDDDDRLYQEVHRLSATLGGLLQDHGSRLLPGALPFARPLDMERKK
SEHPESSLSSEEETAGVENVKSQTYSKDLLGQQPHSEPGAAAFGELQNQMPGPSKEEQSLPAGAQEALSDGLQLEVQPSEEEARGYIVTD
RDPLRPEEGRRLVEDVARLLQVPSSAFADVEDLSCNKIRYIERQTFESLPFLQYINLGCNLITKLSLGTFQAWHGMQFLHNLILNRNPLT
TVEDPYLFELPALKYLDMGTTHITLTTLKNILTMTVELEKLILPSHMACCLCQFKNSIEAVCKTVKLHCNTACLTNSIHCPEEASVGNPE
GAFMKMLQARKQHMSTQLTIESEAPSDSSGINLSGFGGDQLEIQLTEQLRSLIPNEDVRKFMSHVIRTLKMECSETHVQGSCAKLMLRTG
LLMKLLSEQQEAKALNVEWDTDQQKTNYINENMEQNEQKEQKSSELMKEVPGDDYKNKLIFAISVTVILIILIIIFCLIEVNSHKRASEK

--------------------------------------------------------------

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Fusion Gene PPI Analysis for PTPRN2-LRRC37B


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for PTPRN2-LRRC37B


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for PTPRN2-LRRC37B


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource