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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:PUM1-HS2ST1 (FusionGDB2 ID:70227) |
Fusion Gene Summary for PUM1-HS2ST1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: PUM1-HS2ST1 | Fusion gene ID: 70227 | Hgene | Tgene | Gene symbol | PUM1 | HS2ST1 | Gene ID | 9698 | 9653 |
Gene name | pumilio RNA binding family member 1 | heparan sulfate 2-O-sulfotransferase 1 | |
Synonyms | HSPUM|PUMH|PUMH1|PUML1|SCA47 | dJ604K5.2 | |
Cytomap | 1p35.2 | 1p22.3 | |
Type of gene | protein-coding | protein-coding | |
Description | pumilio homolog 1pumilio-1 | heparan sulfate 2-O-sulfotransferase 12-O-sulfotransferase2OST | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | Q7LGA3 | |
Ensembl transtripts involved in fusion gene | ENST00000424085, ENST00000257075, ENST00000373747, ENST00000426105, ENST00000440538, ENST00000373741, ENST00000423018, ENST00000373742, ENST00000490546, | ENST00000370551, ENST00000370550, ENST00000356813, | |
Fusion gene scores | * DoF score | 38 X 31 X 15=17670 | 7 X 7 X 4=196 |
# samples | 56 | 8 | |
** MAII score | log2(56/17670*10)=-4.97973140249401 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(8/196*10)=-1.29278174922785 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: PUM1 [Title/Abstract] AND HS2ST1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | PUM1(31532051)-HS2ST1(87538617), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. | PUM1-HS2ST1 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. PUM1-HS2ST1 seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | PUM1 | GO:0010608 | posttranscriptional regulation of gene expression | 25100735 |
Hgene | PUM1 | GO:0043488 | regulation of mRNA stability | 26724866 |
Hgene | PUM1 | GO:0051726 | regulation of cell cycle | 20818387 |
Hgene | PUM1 | GO:0051983 | regulation of chromosome segregation | 26724866 |
Hgene | PUM1 | GO:1900246 | positive regulation of RIG-I signaling pathway | 25340845 |
Hgene | PUM1 | GO:2000637 | positive regulation of gene silencing by miRNA | 20818387|22345517 |
Fusion gene breakpoints across PUM1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across HS2ST1 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | SKCM | TCGA-EB-A82C-01A | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
ChimerDB4 | SKCM | TCGA-EB-A82C-01A | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
ChimerDB4 | SKCM | TCGA-EB-A82C-01A | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
ChimerDB4 | SKCM | TCGA-EB-A82C-01A | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
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Fusion Gene ORF analysis for PUM1-HS2ST1 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000424085 | ENST00000370551 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000424085 | ENST00000370550 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000424085 | ENST00000356813 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000257075 | ENST00000370551 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000257075 | ENST00000370550 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000257075 | ENST00000356813 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000373747 | ENST00000370551 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000373747 | ENST00000370550 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000373747 | ENST00000356813 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000426105 | ENST00000370551 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000426105 | ENST00000370550 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000426105 | ENST00000356813 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000440538 | ENST00000370551 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000440538 | ENST00000370550 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000440538 | ENST00000356813 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
Frame-shift | ENST00000373741 | ENST00000370551 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
Frame-shift | ENST00000373741 | ENST00000370550 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
Frame-shift | ENST00000373741 | ENST00000356813 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000423018 | ENST00000370551 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000423018 | ENST00000370550 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
In-frame | ENST00000423018 | ENST00000356813 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
Frame-shift | ENST00000373742 | ENST00000370551 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
Frame-shift | ENST00000373742 | ENST00000370550 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
Frame-shift | ENST00000373742 | ENST00000356813 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000490546 | ENST00000370551 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000490546 | ENST00000370550 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000490546 | ENST00000356813 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000424085 | ENST00000370551 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000424085 | ENST00000370550 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000424085 | ENST00000356813 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000257075 | ENST00000370551 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000257075 | ENST00000370550 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000257075 | ENST00000356813 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000373747 | ENST00000370551 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000373747 | ENST00000370550 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000373747 | ENST00000356813 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000426105 | ENST00000370551 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000426105 | ENST00000370550 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000426105 | ENST00000356813 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000440538 | ENST00000370551 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000440538 | ENST00000370550 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000440538 | ENST00000356813 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000373741 | ENST00000370551 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000373741 | ENST00000370550 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000373741 | ENST00000356813 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000423018 | ENST00000370551 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000423018 | ENST00000370550 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000423018 | ENST00000356813 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000373742 | ENST00000370551 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000373742 | ENST00000370550 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000373742 | ENST00000356813 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000490546 | ENST00000370551 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000490546 | ENST00000370550 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
intron-3CDS | ENST00000490546 | ENST00000356813 | PUM1 | chr1 | 31532146 | - | HS2ST1 | chr1 | 87538617 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000424085 | PUM1 | chr1 | 31532051 | - | ENST00000370551 | HS2ST1 | chr1 | 87538617 | + | 1526 | 454 | 504 | 1019 | 171 |
ENST00000424085 | PUM1 | chr1 | 31532051 | - | ENST00000370550 | HS2ST1 | chr1 | 87538617 | + | 6703 | 454 | 504 | 1400 | 298 |
ENST00000424085 | PUM1 | chr1 | 31532051 | - | ENST00000356813 | HS2ST1 | chr1 | 87538617 | + | 3966 | 454 | 504 | 1376 | 290 |
ENST00000257075 | PUM1 | chr1 | 31532051 | - | ENST00000370551 | HS2ST1 | chr1 | 87538617 | + | 1529 | 457 | 507 | 1022 | 171 |
ENST00000257075 | PUM1 | chr1 | 31532051 | - | ENST00000370550 | HS2ST1 | chr1 | 87538617 | + | 6706 | 457 | 507 | 1403 | 298 |
ENST00000257075 | PUM1 | chr1 | 31532051 | - | ENST00000356813 | HS2ST1 | chr1 | 87538617 | + | 3969 | 457 | 507 | 1379 | 290 |
ENST00000373747 | PUM1 | chr1 | 31532051 | - | ENST00000370551 | HS2ST1 | chr1 | 87538617 | + | 1535 | 463 | 513 | 1028 | 171 |
ENST00000373747 | PUM1 | chr1 | 31532051 | - | ENST00000370550 | HS2ST1 | chr1 | 87538617 | + | 6712 | 463 | 513 | 1409 | 298 |
ENST00000373747 | PUM1 | chr1 | 31532051 | - | ENST00000356813 | HS2ST1 | chr1 | 87538617 | + | 3975 | 463 | 513 | 1385 | 290 |
ENST00000426105 | PUM1 | chr1 | 31532051 | - | ENST00000370551 | HS2ST1 | chr1 | 87538617 | + | 1526 | 454 | 504 | 1019 | 171 |
ENST00000426105 | PUM1 | chr1 | 31532051 | - | ENST00000370550 | HS2ST1 | chr1 | 87538617 | + | 6703 | 454 | 504 | 1400 | 298 |
ENST00000426105 | PUM1 | chr1 | 31532051 | - | ENST00000356813 | HS2ST1 | chr1 | 87538617 | + | 3966 | 454 | 504 | 1376 | 290 |
ENST00000440538 | PUM1 | chr1 | 31532051 | - | ENST00000370551 | HS2ST1 | chr1 | 87538617 | + | 1515 | 443 | 493 | 1008 | 171 |
ENST00000440538 | PUM1 | chr1 | 31532051 | - | ENST00000370550 | HS2ST1 | chr1 | 87538617 | + | 6692 | 443 | 493 | 1389 | 298 |
ENST00000440538 | PUM1 | chr1 | 31532051 | - | ENST00000356813 | HS2ST1 | chr1 | 87538617 | + | 3955 | 443 | 493 | 1365 | 290 |
ENST00000423018 | PUM1 | chr1 | 31532051 | - | ENST00000370551 | HS2ST1 | chr1 | 87538617 | + | 1524 | 452 | 502 | 1017 | 171 |
ENST00000423018 | PUM1 | chr1 | 31532051 | - | ENST00000370550 | HS2ST1 | chr1 | 87538617 | + | 6701 | 452 | 502 | 1398 | 298 |
ENST00000423018 | PUM1 | chr1 | 31532051 | - | ENST00000356813 | HS2ST1 | chr1 | 87538617 | + | 3964 | 452 | 502 | 1374 | 290 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000424085 | ENST00000370551 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.003296602 | 0.99670345 |
ENST00000424085 | ENST00000370550 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.000388946 | 0.9996111 |
ENST00000424085 | ENST00000356813 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.001863567 | 0.9981364 |
ENST00000257075 | ENST00000370551 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.003161662 | 0.99683833 |
ENST00000257075 | ENST00000370550 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.000389945 | 0.9996101 |
ENST00000257075 | ENST00000356813 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.00187755 | 0.9981224 |
ENST00000373747 | ENST00000370551 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.003246892 | 0.99675304 |
ENST00000373747 | ENST00000370550 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.000387737 | 0.9996123 |
ENST00000373747 | ENST00000356813 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.001844501 | 0.99815553 |
ENST00000426105 | ENST00000370551 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.003296602 | 0.99670345 |
ENST00000426105 | ENST00000370550 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.000388946 | 0.9996111 |
ENST00000426105 | ENST00000356813 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.001863567 | 0.9981364 |
ENST00000440538 | ENST00000370551 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.002851321 | 0.9971487 |
ENST00000440538 | ENST00000370550 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.000390968 | 0.99960905 |
ENST00000440538 | ENST00000356813 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.001916963 | 0.998083 |
ENST00000423018 | ENST00000370551 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.003670535 | 0.9963295 |
ENST00000423018 | ENST00000370550 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.00038928 | 0.9996107 |
ENST00000423018 | ENST00000356813 | PUM1 | chr1 | 31532051 | - | HS2ST1 | chr1 | 87538617 | + | 0.001869763 | 0.99813026 |
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Fusion Genomic Features for PUM1-HS2ST1 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
PUM1 | chr1 | 31532050 | - | HS2ST1 | chr1 | 87538616 | + | 7.46E-09 | 1 |
PUM1 | chr1 | 31532050 | - | HS2ST1 | chr1 | 87538616 | + | 7.46E-09 | 1 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for PUM1-HS2ST1 |
Go to FGviewer for the breakpoints of chr1:31532051-chr1:87538617 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | HS2ST1 |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Catalyzes the transfer of sulfate to the C2-position of selected hexuronic acid residues within the maturing heparan sulfate (HS). 2-O-sulfation within HS, particularly of iduronate residues, is essential for HS to participate in a variety of high-affinity ligand-binding interactions and signaling processes. Mediates 2-O-sulfation of both L-iduronyl and D-glucuronyl residues (By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000257075 | - | 2 | 22 | 393_613 | 121.0 | 1187.0 | Compositional bias | Note=Ala-rich |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000257075 | - | 2 | 22 | 475_523 | 121.0 | 1187.0 | Compositional bias | Note=Gln-rich |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000257075 | - | 2 | 22 | 642_815 | 121.0 | 1187.0 | Compositional bias | Note=Ser-rich |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000426105 | - | 2 | 22 | 393_613 | 121.0 | 1189.0 | Compositional bias | Note=Ala-rich |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000426105 | - | 2 | 22 | 475_523 | 121.0 | 1189.0 | Compositional bias | Note=Gln-rich |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000426105 | - | 2 | 22 | 642_815 | 121.0 | 1189.0 | Compositional bias | Note=Ser-rich |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000440538 | - | 2 | 22 | 393_613 | 121.0 | 1163.0 | Compositional bias | Note=Ala-rich |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000440538 | - | 2 | 22 | 475_523 | 121.0 | 1163.0 | Compositional bias | Note=Gln-rich |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000440538 | - | 2 | 22 | 642_815 | 121.0 | 1163.0 | Compositional bias | Note=Ser-rich |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000257075 | - | 2 | 22 | 828_1168 | 121.0 | 1187.0 | Domain | PUM-HD |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000426105 | - | 2 | 22 | 828_1168 | 121.0 | 1189.0 | Domain | PUM-HD |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000440538 | - | 2 | 22 | 828_1168 | 121.0 | 1163.0 | Domain | PUM-HD |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000257075 | - | 2 | 22 | 1028_1063 | 121.0 | 1187.0 | Repeat | Pumilio 6 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000257075 | - | 2 | 22 | 1064_1099 | 121.0 | 1187.0 | Repeat | Pumilio 7 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000257075 | - | 2 | 22 | 1103_1142 | 121.0 | 1187.0 | Repeat | Pumilio 8 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000257075 | - | 2 | 22 | 848_883 | 121.0 | 1187.0 | Repeat | Pumilio 1 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000257075 | - | 2 | 22 | 884_919 | 121.0 | 1187.0 | Repeat | Pumilio 2 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000257075 | - | 2 | 22 | 920_955 | 121.0 | 1187.0 | Repeat | Pumilio 3 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000257075 | - | 2 | 22 | 956_991 | 121.0 | 1187.0 | Repeat | Pumilio 4 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000257075 | - | 2 | 22 | 992_1027 | 121.0 | 1187.0 | Repeat | Pumilio 5 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000426105 | - | 2 | 22 | 1028_1063 | 121.0 | 1189.0 | Repeat | Pumilio 6 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000426105 | - | 2 | 22 | 1064_1099 | 121.0 | 1189.0 | Repeat | Pumilio 7 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000426105 | - | 2 | 22 | 1103_1142 | 121.0 | 1189.0 | Repeat | Pumilio 8 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000426105 | - | 2 | 22 | 848_883 | 121.0 | 1189.0 | Repeat | Pumilio 1 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000426105 | - | 2 | 22 | 884_919 | 121.0 | 1189.0 | Repeat | Pumilio 2 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000426105 | - | 2 | 22 | 920_955 | 121.0 | 1189.0 | Repeat | Pumilio 3 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000426105 | - | 2 | 22 | 956_991 | 121.0 | 1189.0 | Repeat | Pumilio 4 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000426105 | - | 2 | 22 | 992_1027 | 121.0 | 1189.0 | Repeat | Pumilio 5 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000440538 | - | 2 | 22 | 1028_1063 | 121.0 | 1163.0 | Repeat | Pumilio 6 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000440538 | - | 2 | 22 | 1064_1099 | 121.0 | 1163.0 | Repeat | Pumilio 7 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000440538 | - | 2 | 22 | 1103_1142 | 121.0 | 1163.0 | Repeat | Pumilio 8 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000440538 | - | 2 | 22 | 848_883 | 121.0 | 1163.0 | Repeat | Pumilio 1 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000440538 | - | 2 | 22 | 884_919 | 121.0 | 1163.0 | Repeat | Pumilio 2 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000440538 | - | 2 | 22 | 920_955 | 121.0 | 1163.0 | Repeat | Pumilio 3 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000440538 | - | 2 | 22 | 956_991 | 121.0 | 1163.0 | Repeat | Pumilio 4 |
Hgene | PUM1 | chr1:31532051 | chr1:87538617 | ENST00000440538 | - | 2 | 22 | 992_1027 | 121.0 | 1163.0 | Repeat | Pumilio 5 |
Tgene | HS2ST1 | chr1:31532051 | chr1:87538617 | ENST00000370550 | 0 | 7 | 1_11 | 41.333333333333336 | 357.0 | Topological domain | Cytoplasmic | |
Tgene | HS2ST1 | chr1:31532051 | chr1:87538617 | ENST00000370550 | 0 | 7 | 29_356 | 41.333333333333336 | 357.0 | Topological domain | Lumenal | |
Tgene | HS2ST1 | chr1:31532051 | chr1:87538617 | ENST00000370551 | 0 | 5 | 1_11 | 41.333333333333336 | 230.0 | Topological domain | Cytoplasmic | |
Tgene | HS2ST1 | chr1:31532051 | chr1:87538617 | ENST00000370551 | 0 | 5 | 29_356 | 41.333333333333336 | 230.0 | Topological domain | Lumenal | |
Tgene | HS2ST1 | chr1:31532051 | chr1:87538617 | ENST00000370550 | 0 | 7 | 12_28 | 41.333333333333336 | 357.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein | |
Tgene | HS2ST1 | chr1:31532051 | chr1:87538617 | ENST00000370551 | 0 | 5 | 12_28 | 41.333333333333336 | 230.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
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Fusion Gene Sequence for PUM1-HS2ST1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000424085_ENST00000370551_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=1526nt_BP=454nt GTGAAAGGTAAGGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCGTGTTGGTGG AATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGC TAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGAC TCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGG TGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACA TCAGAAAGGGCTATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACTTTAGATGAG GAAGAGGACATGGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGTGCAAAGAAT AAATACCATGTCCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAATATAACTTCC TGGAAAGAGATGAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCAATTTACATT AATGTCATAAGGGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTACGGAGACGA AAACAAGGAGACAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAAATCCCGTTC TTCTGTGGCCATAGCTCCGAATGCTGGTAGGGGAGATAAAGTTGGCTCAGATTGATTATCATCCTTATTATCTCTGTAATCTGTGTTTCA TTTCACAAGGGCTAGATATAGGGAAATCGGTGAAAGACTAGACTAAAAATAACATGTAATTCAGTAATATCTAGTTTTGCAGTTACTTTT AAATGCATTTAAAAGATTCCTCATGTAGAGTGATATCCTAATATCCTTGCATTGTTTTCTGAGATGCCGGTTTTTAGTATTTCTTATTTT TGGTGTTATGTTTTGCTGTATTCCAGCAGAGCTCTTAGAGACTGGGGGTGGGGGTGGGTGTCATAAATCTTATTTTGTCCAAAGCTTACT GTTTTAGCTATTCATGTTAAATTAAGAAAAGGCTTAGTGGGTTAAAATTCACCTGGTTTTACTGTTAAACTGATTTTGACTTTAAGAGAA >In-frame_ENST00000424085_ENST00000370551_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=171AA_start in transcript=504_stop in transcript=1019 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF -------------------------------------------------------------- >In-frame_ENST00000424085_ENST00000370550_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=6703nt_BP=454nt GTGAAAGGTAAGGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCGTGTTGGTGG AATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGC TAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGAC TCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGG TGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACA TCAGAAAGGGCTATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACTTTAGATGAG GAAGAGGACATGGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGTGCAAAGAAT AAATACCATGTCCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAATATAACTTCC TGGAAAGAGATGAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCAATTTACATT AATGTCATAAGGGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTACGGAGACGA AAACAAGGAGACAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAAATCCCGTTC TTCTGTGGCCATAGCTCCGAATGCTGGAATGTGGGAAGCAGGTGGGCTATGGATCAAGCCAAGTATAACCTAATTAATGAATATTTTCTG GTGGGAGTTACTGAAGAACTTGAAGATTTTATCATGTTATTGGAGGCAGCATTGCCCCGGTTTTTCAGGGGTGCTACTGAACTCTATCGC ACAGGAAAGAAATCTCATCTTAGGAAAACCACAGAGAAGAAACTCCCCACTAAACAAACCATTGCAAAACTACAGCAATCTGATATTTGG AAAATGGAGAATGAGTTCTATGAATTTGCACTAGAGCAGTTCCAATTCATCAGAGCCCATGCCGTTCGAGAAAAAGATGGAGACCTCTAC ATCCTCGCACAAAACTTTTTCTATGAAAAGATTTACCCTAAGTCGAACTGAGTATAAGGTGTGACTATTGGATTCTTGAACTAAAATTTG ACCCTGTCTTCACCTTTGTTCTCAGCTCCACAGTCTGGATTGCTGACAGTAGGTGTATATGACAATTTGTATTGAGCCAAATTAGGAAAC AGACAGTAACGTCAAGGAAGTAGATACTGGCTGGCATTGTCAGTGTTCTAAGTTTCAGGCATTTTTATTTTTCCTGGCTAAACGTTGGTG AAAGTTATAACCTCCTGCCTGGGAGAAAATATACATCACCTAAAATGAACTTATGGCAGGTCTAATCAAAAGGCTAAATACAATTTCAGA AAAGGTTCTGATACTCTTGTTTTTGATAAAGCATTTTTTCAACTAACCATGAATTAAGATGAGTCCATTTGCCTCTTCTGCCTTCACTGA GGGTTTGGGTTATACACCTCTACTGAATTGTGTTAATAACTGTTTGGCAGTGTGTACTTTGTTTTTGTGAGTCATGTCTCATGAAATTTA TTGGAATGTTTAATCATATTTGCTAAGAAATGTTTCTGCTGTAGTTGGATTTGCCCATATTTATGTAGGTGGTTTTAATTTTTTAAATGG TGATTAGTGTTAAAAATCAATTTAAATCATGACTAATATGGTAAAAAGATAAAGCATCAAAGCAGTATTTCTCATTCCTGCCTCCTCAAT ATCTAATACTGGGAAGATACTTCAAAGAATATTGAGATTGTCTGAAGTTTTAGTTAAGATTTTCACACATTAATATCAAAAAAGTAAGTT TAGTATTTGTTTCTCCATGGGTTATTTGTAAAGCTGTAAACTGAGATATCGGTGACTCCGTATTATGACTCCATTAGTGAGCTGTGGTAT GGGTAGGATTTTCCTACTTCTTCTGTACTTTTACCTGTAGACTATTTTTACTAAGGTGCTTTATAATGTGTTTTAAAGCATTGCATTTAC AAAACAAGGAAAATGCTGTAAATATTGCATATTTTATGTATTTGGACCAAAAGGTTACAAGTAATTAGACAAAAGTGGTTTTGCACCAAT TTTATGTCAAGTAAAACCATCAGACCTACTGTTCTTGTATTTCTCATTTAACTTTACTGTTAAGACATCACTGAAATGAACTTCAGTAAG CTTTCAATTTTGATACACAGTTCATTATTCATAACTTGAGGCAGTAATTACAGTGGAATGAGTACTGGACAAGGAGTCAAAAAACTTGAT TTCAGGTCCTAGCTCTAGCACTTACAGCTGTGTGATCTTGGGCAAGTCACTTAACCTCTCTTTGCCTCAATTTCCTCATCTTGAAATGAG GATAATAATACCTGCTGTACCTACCTCACAGGGCTGTTGTGAGGATTAAATGAGATGGCATGTGAAAGCACTTTGAAAATTGTAAAGCGC TATGTAAATGTAAGGTATTATAGAAACATCTTTAACATATAGTTTCATACCATTCATTTTTTAACAAAGAAAGGGAAAAGTCTGCTTGTA AGCTGGTTGAAAAAGTTAATCTTGATATAAATTTGTGTTTGATAAATATCCTCTCAGTGTTTTATCTTCCATGTTTCAACAACTATTGAA ATATGAAATGCCTGTGAACTCTTAAAGCTTCATGAGCAGCTGCTTGAGTTCAGGAAGTTCACTGTTAGAAATAGGCTTTGTTAGCTGACT AGGGTCAGGGAAACTTTTCTCTTCAAATTTGAAAGCTGTTTCTGTTTTCATTTTACATTATTATTCAGAAATGGTAGCTATTCTATACCT ATGGTTTAAGTAAATATTTCTGAATAAGGCTTCACCATACTGTAAGCATTTTAGGTAGATTGCCTTAAAGGTTATGGGAGGGCATGAGGG AACACTTCTTATGAGAAAACATTTATAAACAAAAGAAACATTTATAAACTAAAGAAAAACTAAAAGAATGACAGAACAATCATCTTAGCA CCCTTTCCTCACAATAATATAAAAATATTAAAAGAACATAGGCAGGCTTTTTTTAAATTTGGCTTTTTTCTTTCCTTTTTTCAAATTGAC TTTTATAGGTATTTCCTGAAAGTGTATACAAATTATTTCCTCGCCCAAAATAAAGCACCACTTCAAGGTGTGGTTTGACATTACATGCTA ATGAACAAACCCAGTATGCAAGTTATTCTTGCACCACATGCTCAAATCTTCTTGAGGTGCATTAACTCTTTTAGGTAACTAGAGCAGTAC TTGGTGAACTAGATCAGGAGGTCAGTAAACTTTCTGTGGAAGGGCCAGAGAGTAAATATTTTAGGCTTTGCAGCCCATACGGTCTCTGTC ACAGCTAGTCAACCCTGCCATTTTACCACAAAAGCAGCAATAGACATTATGTAAACAAATGAGCACAGTTATGTTCCAATAAAACTTTAT TTACAAAAACAGATGACATCCCAGATGCAGACCATGGGCAACCAACCATTGCACTGGCCAAATCATTATTTATGGAGAAATCCTCTTTGT GTCTCTACTCTAGATGCCTAAAAGAGTTTATATACTTCTAAAAGCTCCTAACTTATATCCAAAGAATTGCTTTCTGATTCGTGTAGTCTC TCCCACAGATTCATAAACTTTTATGACTTATATTGTTTCCAGGTGGGCATGGTTTATTTCCCAGTTTAACAGTTCAGAATAGGGGCATTT ATTTTATCATATTTTAGGGTGGGTTAGGAGTATCCTTTCTGGAGACTGAGAAAGGGGTGTATTTAATTCCATCAGGTCCAGTACAGTACT AGGAGTCATAATACTTTATAATCAATTAAATAAATAGAACCACTGAGACAATAATGTATTTTTTTAAAGTGGCAAATGTGGTTTTCTTTT TTCAGCCTTTGCGCTTTTTCAGTATTTTGACCATAGGGAGATAATTTTTTTATAATACAAAAGTAACCACTTGGAATTTTAAAGATAATG TTATGTGTGTATGTGAAATATATATACATATATATATATATGTTTATTTCCTAAAAGAAGAAAAGATACCTTTCTGTTCAACTTGTATCA ACTCCTCTTTTCTAATTGCTGTGAAATGGCAACTGTTGATAAATTATTGTGATTGTTTTAAAATCTAATGGGAAGTAAAATATATTTTGA TTTTACCCAGCTTAATCTGTAAAGTAGCACTTAAATATATCTGATAGCAACACTTAAGATATTGCATGGGGATTACTTTCCTATCATCCA TATGCATTTGTGCAACTTCAAACATATTGGGTGCTTCTGAATTCCTGATGATTGGATTTAAGCTATTGAAAATTGGATAATTTAAACTTA ATGATTTTTATAATTTTCTGATCTTAAAATTTGGTTAATGCCTATAATCTGTTGCTTTTTCTCAATATGTGTCCTATTGGAAATTCCTCA AATCGTTGGTGCCATCAGTGATTTACAAACAATATTTTGATATTGCAGATGACTTGCTTACTGTATTTGCATTGTTAGAAAACAGTTTGT AGACAATGATTCTTTTTTAATAAAATCAAATAATTCTAAAAGTGCTAGAGAATTTAACTAAAAGCTGGTTCCCAAATGCATAGCTGGCAT TTTAATTTAAATTCAAATCTACATAGAGAACATCTGTGTAAATCATCTAACTGGATTTTTCCATTGGTCATTCCCAAACACACCTATGGT CCTAGAATCCTTAAGAGAAGCACCCTGTAACCTTTTATGTGGTTTGCCTTTAAGAGGCCCAGGTGCTTCTCCTTTATGATTTGAGTTGGC CTCTTCATAAATTAGTGCTGTTTACTTTCAGAGGAAGCAGAGAAGTTGCTGTTATGTTTTTGCATCCGTTTACCCTATGCAAAGTTGCTG TATGATGCCAACTAAACTACTCTTTAGGCAGCCTTCTGAGGAGAAAAGCAACCCTGTTTCAAATCCACTGCCAATTCAGCTCCTCTGGAG TGGAGCTTTCTGATTTCTTGGAGCAGGAATTTTAGAGATTGAAATGAATGATCATTTAGTCAGATTTATCCTGTAATTTCATGCAGCTTT GTGGCCTTTGCAGTACTATTTATAAAATGGACCCTGATGGTGATGAACTCTTTAGAACGCATTACTGTTAAGCCTGTGTTGAGACATTGA TGCTGTCTATCTCATTTTTTAGACAGTTTTTGTAGCTTTCTATTGAGAGTCAGGTATGTGAGCATCTCTGAAGCAGTGTTGAATGTAATT TTCGGAAACATGGATTGTGTATTTTGACTTTTATTTTATAAATACACAGCTCAACAGTGCCTTTTTTTTCCCTCATAGTCCTGTTGGAAG ATGCTCACTACTTTCTCTCTTCTCTCTCCCTGCCCTCCCCCACTCCATTCAGTTGATTCATTTATGCAAATTCTGTTTCCAACTTGAAAC CATTTTGTCACATCTGTTGGAGAGATAATCACTCCTTTTCCTTAACATTCTGCCAGCTTTCTGATGTTGAAGTGTTTCAGTTGACTACCT GATGCAAAAGCTATAAAATAAACAGTGGGAAGGGGAAAAATTGGTGTCCTGTTTTAATATTTTCTTTTGTAGCCTTGACACTGATGGACA TTTTCCAAGCTGACTCAGTGTTCAGTGTCAACTTAACTCTCAGATAGTGTTGCCATCAAGAAAGCATGCAACATCATTGGTTTCTAATGA TTTTATGGCTTGTGACAATATTTTATCTGGACTGACATGCCTCTGCTGCTTTTGCTTTGTACTTCATTGCTGGTAATAAAATTTCAGATG GAAAACTTACAAAATATATACTTAATTAGAAGAAAAAAATAGAGAAAGGGCTATTAGAATTAAAAAAATTTGAAAGTAACTTAATCTAAC ATTTATGGCACAGTTTGGACATATCCATAATTTTTTTTGGGAACACACATTTCTGATTTTTTTTTTCCCCCTTAAAGAAGAAAGTCTCAA TTCCATTGATTTTCAATTCTTAGCCACTGGCTCATTGCTTTGAGCAATGCTTGATTGATTCTATTTATATTATATGATATTGGGTTGATA AAATACCAGTTCAATGATGAGTTTTCTTAACAGAATTTGGTTTGTACTTGCAGTGGCTGAACAAAGAGCATGGCTTGAGAATCAAAGGGA TCTGCATTTAGCAATGTGATGTCAGTAAATGGACATAACAGGATTGTTGTAAAGGTTGGGCATGATGTATGCAAAGTACTGGCCAGGGTA GACTAATAACTGATGGCATTTATATGCTGTGCTGGAATATTGTTACCAAGCTGATGTGCCGTTCTCACCCTGCAGAATACTGGTTTTGTC >In-frame_ENST00000424085_ENST00000370550_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=298AA_start in transcript=504_stop in transcript=1400 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF AKFGVKKKPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTFDECVAEGGSDCAPEKLWLQIPFFCGHSSECWNVGSRWAMD QAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATELYRTGKKSHLRKTTEKKLPTKQTIAKLQQSDIWKMENEFYEFALEQFQFIR -------------------------------------------------------------- >In-frame_ENST00000424085_ENST00000356813_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=3966nt_BP=454nt GTGAAAGGTAAGGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCGTGTTGGTGG AATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGC TAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGAC TCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGG TGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACA TCAGAAAGGGCTATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACTTTAGATGAG GAAGAGGACATGGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGTGCAAAGAAT AAATACCATGTCCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAATATAACTTCC TGGAAAGAGATGAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCAATTTACATT AATGTCATAAGGGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTACGGAGACGA AAACAAGGAGACAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAAATCCCGTTC TTCTGTGGCCATAGCTCCGAATGCTGGAATGTGGGAAGCAGGTGGGCTATGGATCAAGCCAAGTATAACCTAATTAATGAATATTTTCTG GTGGGAGTTACTGAAGAACTTGAAGATTTTATCATGTTATTGGAGGCAGCATTGCCCCGGTTTTTCAGGGGTGCTACTGAACTCTATCGC ACAGCACCAGATACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCCATCTCATCGCTTTTGGTGAAAGTCAGTCCA GTTTGTAAAGATTCTCATTGTCACTGTAGACGAGGAACTGGGACACCAAAAGGAGAAACTCTGGCCACGCTTGCACCCTGTTCCCAATCC TGGTCCAGTGTCACCCACAGATGGTAAGGAGCTCTAGAGACCTCACCAGCCCCTGGGATTGGTCACCTCACTCTTCTATGGACAGAGATT CCTGCTGGGATCCTTTGAGGGCAAGCAGACCCTTCTTCCAGCTCGGACTGTGAACTCCACTGCAGCCGTAAGGACTGTCTGTGACAGTGA GCCCGAGATGACTGGGCTCTGTGCTCCCTCCCGGCCCTCCAATCCTTGGCCTGCCACAGAGAACTGAGCTCTTTTATTAGCACCATGAAT GTGACTGATACAGCTAGCCATTCCCTTGTGCGAATGACTCAGTTTATTAATGCTCTGCTAAAGATGGCTTCTTTGCTTGCCAGCAGCCTT AAACAGTATTTCATTAAAACTGGCTTAATTATTTTGAGAAGACGGCCCAATTAAAAGCTATACACTCCCTCTATGTGAGTGTTTATACAT AGAGCTGTATATATAATACATATTTGTAAGTGTGTATATATATATGTGTGTATGTATGTGTCTATAAATATATAGGCTTAGCAATTTCAT TACATGGGATAAATTGTTGGAAAAAATACCCAGGAGCTGGTCCCCTTTCTGTTGCTAGATTCAGAGTAGAGGCCACCCCTCCACTCTGGG AGAGGCTGGTGTTGGTGATCTCTCAATGACTCTGCAATGGAAGTCCCAACTGCACAGAGCCCTGCCCCAGTTTCAGGAGCCAGCAGCCTC GGAGAGGCGGATCCTGACCTCTGCTCTGCTCTTGGGATAGCCTTTCCCTTCCCAGCAGGGTTGAGATACTTGGGCCGGGAAATGTTGTGG CAAAGTGTTTGCCAAAGCTCAGGAGAGACACAGACTTGGGGCTTTTGTTTCTTGAGCTGGCTGTCTAGCTTTCCTAATGAGCAAATATGT TCTCTTTAAGGAAACAAACAAACAAAGCAAAAACACCAATTCATCTGGATTTTATTCATTTGTTTTAAATACAAACAAACAAAAGGAGAG TGGTTATTTCTGCACCAACTATTTCAAATGCAAGTTACTCCATCGCTCGGGGTGGTTGGATGGTGCTTGTCACCATAGGACCCACAGGGC TAGTTCCAACTGTTATTCGGTAAGGCTTTTTTCTTTCCAAAATTCCCAGTGTTCCTTTAAGGCCCATTTAGCTGCGGGTTTTGTTTATTC TCCCGGCAATCAGCATTTAAAATAAGACAAACAAGCATTTTTTCCTGGGCTGTGAATCCCCCCGGCCAGCCTCCACCTGCACACCTGAAG CCAGCATGTCCAATCAAATTTCTCTGTAACCCATATCCCCTTTAGAGACTTGCCCCCGTCGTATACCAGGCTGGAAATAGAGAACTTAAG CAGGGCAAATGTAATTTTAAGAATTGCTAATGATGCTAGAAATCTGCAATGCAATTAGCGTCATTGGATTTGGCGCTCCTCCGAAGGCAC AAAACTCCTTGTCATAGCGCAGTGGCAGCAGCGGCAAGTGCCTCCGCATGTGCCGGGCTGTCCGGGTATGCTGGCAGCCGCTTTGCACTG AGATGTGAGCAGTTGGTTAGGCTTCCTCTCTTTCTTTCTCACAGATACTGACTTCTTTGTCTCTTTTCTGGGTTGCAGAGGGATGGGTAT TTTCCATTGATTATTACTTTAGCATTTGACCCTCCAGTGGAGTCACCCTGTTTTTTTTTTAGAAAACTGAGACTCTCACTTTGTGAATTC ACTGTGCTCTCTGGGATTTCAGTGCTGTAGTTCAACCACCAATCCCCCTGTCCTGAACTCCAGTACTTCTGATGCTATTAATTGGTTCCT CAACAATTGTGGCCTTTTCCATCATTGCCCACCATAGTATATACTTTTTCTTTCTCTCTCTTTTTTCTAATTTCCTTGTCTTCTTCACTC TCCATGGAGCCAGAGGTAGTATGAAGAGTTAAAAATAGGAATATAAAGAAAGCCAGAGGGACAGAGGGAGTGAGAAAGAAAAATTTTAAA AAGGGAGGAAATGAATTATTGGATTAAAAATAAACTTTTACTTTTTTGCAGAAAAATTATTTTTGCTCTCTGGGAAAATAACATGGGCCA GGCATAAAAAGCATGTCAGCTGGCTAAAAGATTGCAAAATCCAGAAGATGATCTCGATGTGTCTGTTCAATTTAGCAAGGGTATCTACTA GGGGATCCTCTTTTAAATATGGAGGCCCAAATCAGAAGCTTGTAGAGGGGAGCTATTCTTCCAAGATTCCAGATGTGTCTGTGAGACAAC ACGTTATGGGGCAAATTGATTTCACCCTTGGGAAACCAGGGAGATTTTCAAAGTTATGTCTGCAAAGCCAGCTAATGCAATTCCCCATTA GTGCATTAAAGTGCGCCCTTATTAATTCAAACATAAAGGCAACAAAATAAGCTTTTAAATTTAAAATATAATACATATATAATGAGCATG TGTGAAAGCCTTATTCAAATGAAAATACAGGAGTGTTTGAACTACTGAGGTATCTTTTGTATTGAATTATGAGCATATGTAATAGATTTA ATTATTAATTTCCCCATTGTTCTATGCACACAGACAGGGTTCAAGGCACAGTCATTCTCTGGCTTTCATAGATCTAATTTGTATAATTAT >In-frame_ENST00000424085_ENST00000356813_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=290AA_start in transcript=504_stop in transcript=1376 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF AKFGVKKKPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTFDECVAEGGSDCAPEKLWLQIPFFCGHSSECWNVGSRWAMD QAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATELYRTAPDTATPSHRHGPICGSKSISSLLVKVSPVCKDSHCHCRRGTGTPKG -------------------------------------------------------------- >In-frame_ENST00000257075_ENST00000370551_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=1529nt_BP=457nt GGAGTGAAAGGTAAGGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCGTGTTGG TGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACC AGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGG GACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCA TGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGA ACATCAGAAAGGGCTATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACTTTAGAT GAGGAAGAGGACATGGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGTGCAAAG AATAAATACCATGTCCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAATATAACT TCCTGGAAAGAGATGAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCAATTTAC ATTAATGTCATAAGGGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTACGGAGA CGAAAACAAGGAGACAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAAATCCCG TTCTTCTGTGGCCATAGCTCCGAATGCTGGTAGGGGAGATAAAGTTGGCTCAGATTGATTATCATCCTTATTATCTCTGTAATCTGTGTT TCATTTCACAAGGGCTAGATATAGGGAAATCGGTGAAAGACTAGACTAAAAATAACATGTAATTCAGTAATATCTAGTTTTGCAGTTACT TTTAAATGCATTTAAAAGATTCCTCATGTAGAGTGATATCCTAATATCCTTGCATTGTTTTCTGAGATGCCGGTTTTTAGTATTTCTTAT TTTTGGTGTTATGTTTTGCTGTATTCCAGCAGAGCTCTTAGAGACTGGGGGTGGGGGTGGGTGTCATAAATCTTATTTTGTCCAAAGCTT ACTGTTTTAGCTATTCATGTTAAATTAAGAAAAGGCTTAGTGGGTTAAAATTCACCTGGTTTTACTGTTAAACTGATTTTGACTTTAAGA >In-frame_ENST00000257075_ENST00000370551_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=171AA_start in transcript=507_stop in transcript=1022 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF -------------------------------------------------------------- >In-frame_ENST00000257075_ENST00000370550_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=6706nt_BP=457nt GGAGTGAAAGGTAAGGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCGTGTTGG TGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACC AGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGG GACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCA TGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGA ACATCAGAAAGGGCTATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACTTTAGAT GAGGAAGAGGACATGGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGTGCAAAG AATAAATACCATGTCCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAATATAACT TCCTGGAAAGAGATGAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCAATTTAC ATTAATGTCATAAGGGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTACGGAGA CGAAAACAAGGAGACAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAAATCCCG TTCTTCTGTGGCCATAGCTCCGAATGCTGGAATGTGGGAAGCAGGTGGGCTATGGATCAAGCCAAGTATAACCTAATTAATGAATATTTT CTGGTGGGAGTTACTGAAGAACTTGAAGATTTTATCATGTTATTGGAGGCAGCATTGCCCCGGTTTTTCAGGGGTGCTACTGAACTCTAT CGCACAGGAAAGAAATCTCATCTTAGGAAAACCACAGAGAAGAAACTCCCCACTAAACAAACCATTGCAAAACTACAGCAATCTGATATT TGGAAAATGGAGAATGAGTTCTATGAATTTGCACTAGAGCAGTTCCAATTCATCAGAGCCCATGCCGTTCGAGAAAAAGATGGAGACCTC TACATCCTCGCACAAAACTTTTTCTATGAAAAGATTTACCCTAAGTCGAACTGAGTATAAGGTGTGACTATTGGATTCTTGAACTAAAAT TTGACCCTGTCTTCACCTTTGTTCTCAGCTCCACAGTCTGGATTGCTGACAGTAGGTGTATATGACAATTTGTATTGAGCCAAATTAGGA AACAGACAGTAACGTCAAGGAAGTAGATACTGGCTGGCATTGTCAGTGTTCTAAGTTTCAGGCATTTTTATTTTTCCTGGCTAAACGTTG GTGAAAGTTATAACCTCCTGCCTGGGAGAAAATATACATCACCTAAAATGAACTTATGGCAGGTCTAATCAAAAGGCTAAATACAATTTC AGAAAAGGTTCTGATACTCTTGTTTTTGATAAAGCATTTTTTCAACTAACCATGAATTAAGATGAGTCCATTTGCCTCTTCTGCCTTCAC TGAGGGTTTGGGTTATACACCTCTACTGAATTGTGTTAATAACTGTTTGGCAGTGTGTACTTTGTTTTTGTGAGTCATGTCTCATGAAAT TTATTGGAATGTTTAATCATATTTGCTAAGAAATGTTTCTGCTGTAGTTGGATTTGCCCATATTTATGTAGGTGGTTTTAATTTTTTAAA TGGTGATTAGTGTTAAAAATCAATTTAAATCATGACTAATATGGTAAAAAGATAAAGCATCAAAGCAGTATTTCTCATTCCTGCCTCCTC AATATCTAATACTGGGAAGATACTTCAAAGAATATTGAGATTGTCTGAAGTTTTAGTTAAGATTTTCACACATTAATATCAAAAAAGTAA GTTTAGTATTTGTTTCTCCATGGGTTATTTGTAAAGCTGTAAACTGAGATATCGGTGACTCCGTATTATGACTCCATTAGTGAGCTGTGG TATGGGTAGGATTTTCCTACTTCTTCTGTACTTTTACCTGTAGACTATTTTTACTAAGGTGCTTTATAATGTGTTTTAAAGCATTGCATT TACAAAACAAGGAAAATGCTGTAAATATTGCATATTTTATGTATTTGGACCAAAAGGTTACAAGTAATTAGACAAAAGTGGTTTTGCACC AATTTTATGTCAAGTAAAACCATCAGACCTACTGTTCTTGTATTTCTCATTTAACTTTACTGTTAAGACATCACTGAAATGAACTTCAGT AAGCTTTCAATTTTGATACACAGTTCATTATTCATAACTTGAGGCAGTAATTACAGTGGAATGAGTACTGGACAAGGAGTCAAAAAACTT GATTTCAGGTCCTAGCTCTAGCACTTACAGCTGTGTGATCTTGGGCAAGTCACTTAACCTCTCTTTGCCTCAATTTCCTCATCTTGAAAT GAGGATAATAATACCTGCTGTACCTACCTCACAGGGCTGTTGTGAGGATTAAATGAGATGGCATGTGAAAGCACTTTGAAAATTGTAAAG CGCTATGTAAATGTAAGGTATTATAGAAACATCTTTAACATATAGTTTCATACCATTCATTTTTTAACAAAGAAAGGGAAAAGTCTGCTT GTAAGCTGGTTGAAAAAGTTAATCTTGATATAAATTTGTGTTTGATAAATATCCTCTCAGTGTTTTATCTTCCATGTTTCAACAACTATT GAAATATGAAATGCCTGTGAACTCTTAAAGCTTCATGAGCAGCTGCTTGAGTTCAGGAAGTTCACTGTTAGAAATAGGCTTTGTTAGCTG ACTAGGGTCAGGGAAACTTTTCTCTTCAAATTTGAAAGCTGTTTCTGTTTTCATTTTACATTATTATTCAGAAATGGTAGCTATTCTATA CCTATGGTTTAAGTAAATATTTCTGAATAAGGCTTCACCATACTGTAAGCATTTTAGGTAGATTGCCTTAAAGGTTATGGGAGGGCATGA GGGAACACTTCTTATGAGAAAACATTTATAAACAAAAGAAACATTTATAAACTAAAGAAAAACTAAAAGAATGACAGAACAATCATCTTA GCACCCTTTCCTCACAATAATATAAAAATATTAAAAGAACATAGGCAGGCTTTTTTTAAATTTGGCTTTTTTCTTTCCTTTTTTCAAATT GACTTTTATAGGTATTTCCTGAAAGTGTATACAAATTATTTCCTCGCCCAAAATAAAGCACCACTTCAAGGTGTGGTTTGACATTACATG CTAATGAACAAACCCAGTATGCAAGTTATTCTTGCACCACATGCTCAAATCTTCTTGAGGTGCATTAACTCTTTTAGGTAACTAGAGCAG TACTTGGTGAACTAGATCAGGAGGTCAGTAAACTTTCTGTGGAAGGGCCAGAGAGTAAATATTTTAGGCTTTGCAGCCCATACGGTCTCT GTCACAGCTAGTCAACCCTGCCATTTTACCACAAAAGCAGCAATAGACATTATGTAAACAAATGAGCACAGTTATGTTCCAATAAAACTT TATTTACAAAAACAGATGACATCCCAGATGCAGACCATGGGCAACCAACCATTGCACTGGCCAAATCATTATTTATGGAGAAATCCTCTT TGTGTCTCTACTCTAGATGCCTAAAAGAGTTTATATACTTCTAAAAGCTCCTAACTTATATCCAAAGAATTGCTTTCTGATTCGTGTAGT CTCTCCCACAGATTCATAAACTTTTATGACTTATATTGTTTCCAGGTGGGCATGGTTTATTTCCCAGTTTAACAGTTCAGAATAGGGGCA TTTATTTTATCATATTTTAGGGTGGGTTAGGAGTATCCTTTCTGGAGACTGAGAAAGGGGTGTATTTAATTCCATCAGGTCCAGTACAGT ACTAGGAGTCATAATACTTTATAATCAATTAAATAAATAGAACCACTGAGACAATAATGTATTTTTTTAAAGTGGCAAATGTGGTTTTCT TTTTTCAGCCTTTGCGCTTTTTCAGTATTTTGACCATAGGGAGATAATTTTTTTATAATACAAAAGTAACCACTTGGAATTTTAAAGATA ATGTTATGTGTGTATGTGAAATATATATACATATATATATATATGTTTATTTCCTAAAAGAAGAAAAGATACCTTTCTGTTCAACTTGTA TCAACTCCTCTTTTCTAATTGCTGTGAAATGGCAACTGTTGATAAATTATTGTGATTGTTTTAAAATCTAATGGGAAGTAAAATATATTT TGATTTTACCCAGCTTAATCTGTAAAGTAGCACTTAAATATATCTGATAGCAACACTTAAGATATTGCATGGGGATTACTTTCCTATCAT CCATATGCATTTGTGCAACTTCAAACATATTGGGTGCTTCTGAATTCCTGATGATTGGATTTAAGCTATTGAAAATTGGATAATTTAAAC TTAATGATTTTTATAATTTTCTGATCTTAAAATTTGGTTAATGCCTATAATCTGTTGCTTTTTCTCAATATGTGTCCTATTGGAAATTCC TCAAATCGTTGGTGCCATCAGTGATTTACAAACAATATTTTGATATTGCAGATGACTTGCTTACTGTATTTGCATTGTTAGAAAACAGTT TGTAGACAATGATTCTTTTTTAATAAAATCAAATAATTCTAAAAGTGCTAGAGAATTTAACTAAAAGCTGGTTCCCAAATGCATAGCTGG CATTTTAATTTAAATTCAAATCTACATAGAGAACATCTGTGTAAATCATCTAACTGGATTTTTCCATTGGTCATTCCCAAACACACCTAT GGTCCTAGAATCCTTAAGAGAAGCACCCTGTAACCTTTTATGTGGTTTGCCTTTAAGAGGCCCAGGTGCTTCTCCTTTATGATTTGAGTT GGCCTCTTCATAAATTAGTGCTGTTTACTTTCAGAGGAAGCAGAGAAGTTGCTGTTATGTTTTTGCATCCGTTTACCCTATGCAAAGTTG CTGTATGATGCCAACTAAACTACTCTTTAGGCAGCCTTCTGAGGAGAAAAGCAACCCTGTTTCAAATCCACTGCCAATTCAGCTCCTCTG GAGTGGAGCTTTCTGATTTCTTGGAGCAGGAATTTTAGAGATTGAAATGAATGATCATTTAGTCAGATTTATCCTGTAATTTCATGCAGC TTTGTGGCCTTTGCAGTACTATTTATAAAATGGACCCTGATGGTGATGAACTCTTTAGAACGCATTACTGTTAAGCCTGTGTTGAGACAT TGATGCTGTCTATCTCATTTTTTAGACAGTTTTTGTAGCTTTCTATTGAGAGTCAGGTATGTGAGCATCTCTGAAGCAGTGTTGAATGTA ATTTTCGGAAACATGGATTGTGTATTTTGACTTTTATTTTATAAATACACAGCTCAACAGTGCCTTTTTTTTCCCTCATAGTCCTGTTGG AAGATGCTCACTACTTTCTCTCTTCTCTCTCCCTGCCCTCCCCCACTCCATTCAGTTGATTCATTTATGCAAATTCTGTTTCCAACTTGA AACCATTTTGTCACATCTGTTGGAGAGATAATCACTCCTTTTCCTTAACATTCTGCCAGCTTTCTGATGTTGAAGTGTTTCAGTTGACTA CCTGATGCAAAAGCTATAAAATAAACAGTGGGAAGGGGAAAAATTGGTGTCCTGTTTTAATATTTTCTTTTGTAGCCTTGACACTGATGG ACATTTTCCAAGCTGACTCAGTGTTCAGTGTCAACTTAACTCTCAGATAGTGTTGCCATCAAGAAAGCATGCAACATCATTGGTTTCTAA TGATTTTATGGCTTGTGACAATATTTTATCTGGACTGACATGCCTCTGCTGCTTTTGCTTTGTACTTCATTGCTGGTAATAAAATTTCAG ATGGAAAACTTACAAAATATATACTTAATTAGAAGAAAAAAATAGAGAAAGGGCTATTAGAATTAAAAAAATTTGAAAGTAACTTAATCT AACATTTATGGCACAGTTTGGACATATCCATAATTTTTTTTGGGAACACACATTTCTGATTTTTTTTTTCCCCCTTAAAGAAGAAAGTCT CAATTCCATTGATTTTCAATTCTTAGCCACTGGCTCATTGCTTTGAGCAATGCTTGATTGATTCTATTTATATTATATGATATTGGGTTG ATAAAATACCAGTTCAATGATGAGTTTTCTTAACAGAATTTGGTTTGTACTTGCAGTGGCTGAACAAAGAGCATGGCTTGAGAATCAAAG GGATCTGCATTTAGCAATGTGATGTCAGTAAATGGACATAACAGGATTGTTGTAAAGGTTGGGCATGATGTATGCAAAGTACTGGCCAGG GTAGACTAATAACTGATGGCATTTATATGCTGTGCTGGAATATTGTTACCAAGCTGATGTGCCGTTCTCACCCTGCAGAATACTGGTTTT >In-frame_ENST00000257075_ENST00000370550_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=298AA_start in transcript=507_stop in transcript=1403 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF AKFGVKKKPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTFDECVAEGGSDCAPEKLWLQIPFFCGHSSECWNVGSRWAMD QAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATELYRTGKKSHLRKTTEKKLPTKQTIAKLQQSDIWKMENEFYEFALEQFQFIR -------------------------------------------------------------- >In-frame_ENST00000257075_ENST00000356813_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=3969nt_BP=457nt GGAGTGAAAGGTAAGGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCGTGTTGG TGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACC AGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGG GACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCA TGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGA ACATCAGAAAGGGCTATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACTTTAGAT GAGGAAGAGGACATGGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGTGCAAAG AATAAATACCATGTCCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAATATAACT TCCTGGAAAGAGATGAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCAATTTAC ATTAATGTCATAAGGGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTACGGAGA CGAAAACAAGGAGACAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAAATCCCG TTCTTCTGTGGCCATAGCTCCGAATGCTGGAATGTGGGAAGCAGGTGGGCTATGGATCAAGCCAAGTATAACCTAATTAATGAATATTTT CTGGTGGGAGTTACTGAAGAACTTGAAGATTTTATCATGTTATTGGAGGCAGCATTGCCCCGGTTTTTCAGGGGTGCTACTGAACTCTAT CGCACAGCACCAGATACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCCATCTCATCGCTTTTGGTGAAAGTCAGT CCAGTTTGTAAAGATTCTCATTGTCACTGTAGACGAGGAACTGGGACACCAAAAGGAGAAACTCTGGCCACGCTTGCACCCTGTTCCCAA TCCTGGTCCAGTGTCACCCACAGATGGTAAGGAGCTCTAGAGACCTCACCAGCCCCTGGGATTGGTCACCTCACTCTTCTATGGACAGAG ATTCCTGCTGGGATCCTTTGAGGGCAAGCAGACCCTTCTTCCAGCTCGGACTGTGAACTCCACTGCAGCCGTAAGGACTGTCTGTGACAG TGAGCCCGAGATGACTGGGCTCTGTGCTCCCTCCCGGCCCTCCAATCCTTGGCCTGCCACAGAGAACTGAGCTCTTTTATTAGCACCATG AATGTGACTGATACAGCTAGCCATTCCCTTGTGCGAATGACTCAGTTTATTAATGCTCTGCTAAAGATGGCTTCTTTGCTTGCCAGCAGC CTTAAACAGTATTTCATTAAAACTGGCTTAATTATTTTGAGAAGACGGCCCAATTAAAAGCTATACACTCCCTCTATGTGAGTGTTTATA CATAGAGCTGTATATATAATACATATTTGTAAGTGTGTATATATATATGTGTGTATGTATGTGTCTATAAATATATAGGCTTAGCAATTT CATTACATGGGATAAATTGTTGGAAAAAATACCCAGGAGCTGGTCCCCTTTCTGTTGCTAGATTCAGAGTAGAGGCCACCCCTCCACTCT GGGAGAGGCTGGTGTTGGTGATCTCTCAATGACTCTGCAATGGAAGTCCCAACTGCACAGAGCCCTGCCCCAGTTTCAGGAGCCAGCAGC CTCGGAGAGGCGGATCCTGACCTCTGCTCTGCTCTTGGGATAGCCTTTCCCTTCCCAGCAGGGTTGAGATACTTGGGCCGGGAAATGTTG TGGCAAAGTGTTTGCCAAAGCTCAGGAGAGACACAGACTTGGGGCTTTTGTTTCTTGAGCTGGCTGTCTAGCTTTCCTAATGAGCAAATA TGTTCTCTTTAAGGAAACAAACAAACAAAGCAAAAACACCAATTCATCTGGATTTTATTCATTTGTTTTAAATACAAACAAACAAAAGGA GAGTGGTTATTTCTGCACCAACTATTTCAAATGCAAGTTACTCCATCGCTCGGGGTGGTTGGATGGTGCTTGTCACCATAGGACCCACAG GGCTAGTTCCAACTGTTATTCGGTAAGGCTTTTTTCTTTCCAAAATTCCCAGTGTTCCTTTAAGGCCCATTTAGCTGCGGGTTTTGTTTA TTCTCCCGGCAATCAGCATTTAAAATAAGACAAACAAGCATTTTTTCCTGGGCTGTGAATCCCCCCGGCCAGCCTCCACCTGCACACCTG AAGCCAGCATGTCCAATCAAATTTCTCTGTAACCCATATCCCCTTTAGAGACTTGCCCCCGTCGTATACCAGGCTGGAAATAGAGAACTT AAGCAGGGCAAATGTAATTTTAAGAATTGCTAATGATGCTAGAAATCTGCAATGCAATTAGCGTCATTGGATTTGGCGCTCCTCCGAAGG CACAAAACTCCTTGTCATAGCGCAGTGGCAGCAGCGGCAAGTGCCTCCGCATGTGCCGGGCTGTCCGGGTATGCTGGCAGCCGCTTTGCA CTGAGATGTGAGCAGTTGGTTAGGCTTCCTCTCTTTCTTTCTCACAGATACTGACTTCTTTGTCTCTTTTCTGGGTTGCAGAGGGATGGG TATTTTCCATTGATTATTACTTTAGCATTTGACCCTCCAGTGGAGTCACCCTGTTTTTTTTTTAGAAAACTGAGACTCTCACTTTGTGAA TTCACTGTGCTCTCTGGGATTTCAGTGCTGTAGTTCAACCACCAATCCCCCTGTCCTGAACTCCAGTACTTCTGATGCTATTAATTGGTT CCTCAACAATTGTGGCCTTTTCCATCATTGCCCACCATAGTATATACTTTTTCTTTCTCTCTCTTTTTTCTAATTTCCTTGTCTTCTTCA CTCTCCATGGAGCCAGAGGTAGTATGAAGAGTTAAAAATAGGAATATAAAGAAAGCCAGAGGGACAGAGGGAGTGAGAAAGAAAAATTTT AAAAAGGGAGGAAATGAATTATTGGATTAAAAATAAACTTTTACTTTTTTGCAGAAAAATTATTTTTGCTCTCTGGGAAAATAACATGGG CCAGGCATAAAAAGCATGTCAGCTGGCTAAAAGATTGCAAAATCCAGAAGATGATCTCGATGTGTCTGTTCAATTTAGCAAGGGTATCTA CTAGGGGATCCTCTTTTAAATATGGAGGCCCAAATCAGAAGCTTGTAGAGGGGAGCTATTCTTCCAAGATTCCAGATGTGTCTGTGAGAC AACACGTTATGGGGCAAATTGATTTCACCCTTGGGAAACCAGGGAGATTTTCAAAGTTATGTCTGCAAAGCCAGCTAATGCAATTCCCCA TTAGTGCATTAAAGTGCGCCCTTATTAATTCAAACATAAAGGCAACAAAATAAGCTTTTAAATTTAAAATATAATACATATATAATGAGC ATGTGTGAAAGCCTTATTCAAATGAAAATACAGGAGTGTTTGAACTACTGAGGTATCTTTTGTATTGAATTATGAGCATATGTAATAGAT TTAATTATTAATTTCCCCATTGTTCTATGCACACAGACAGGGTTCAAGGCACAGTCATTCTCTGGCTTTCATAGATCTAATTTGTATAAT >In-frame_ENST00000257075_ENST00000356813_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=290AA_start in transcript=507_stop in transcript=1379 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF AKFGVKKKPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTFDECVAEGGSDCAPEKLWLQIPFFCGHSSECWNVGSRWAMD QAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATELYRTAPDTATPSHRHGPICGSKSISSLLVKVSPVCKDSHCHCRRGTGTPKG -------------------------------------------------------------- >In-frame_ENST00000373747_ENST00000370551_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=1535nt_BP=463nt GTTGTCGGAGTGAAAGGTAAGGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCG TGTTGGTGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCA AGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGC AGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAG GCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCA TGCAGAACATCAGAAAGGGCTATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACT TTAGATGAGGAAGAGGACATGGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGT GCAAAGAATAAATACCATGTCCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAAT ATAACTTCCTGGAAAGAGATGAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCA ATTTACATTAATGTCATAAGGGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTA CGGAGACGAAAACAAGGAGACAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAA ATCCCGTTCTTCTGTGGCCATAGCTCCGAATGCTGGTAGGGGAGATAAAGTTGGCTCAGATTGATTATCATCCTTATTATCTCTGTAATC TGTGTTTCATTTCACAAGGGCTAGATATAGGGAAATCGGTGAAAGACTAGACTAAAAATAACATGTAATTCAGTAATATCTAGTTTTGCA GTTACTTTTAAATGCATTTAAAAGATTCCTCATGTAGAGTGATATCCTAATATCCTTGCATTGTTTTCTGAGATGCCGGTTTTTAGTATT TCTTATTTTTGGTGTTATGTTTTGCTGTATTCCAGCAGAGCTCTTAGAGACTGGGGGTGGGGGTGGGTGTCATAAATCTTATTTTGTCCA AAGCTTACTGTTTTAGCTATTCATGTTAAATTAAGAAAAGGCTTAGTGGGTTAAAATTCACCTGGTTTTACTGTTAAACTGATTTTGACT TTAAGAGAAGCCAAGGTTATGGCTGTGGTTTAGTTTGCTAGTAAATATCAAGTGGAAAATAAAGATACTTTAATAAGAACTGTATTTCCT >In-frame_ENST00000373747_ENST00000370551_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=171AA_start in transcript=513_stop in transcript=1028 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF -------------------------------------------------------------- >In-frame_ENST00000373747_ENST00000370550_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=6712nt_BP=463nt GTTGTCGGAGTGAAAGGTAAGGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCG TGTTGGTGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCA AGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGC AGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAG GCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCA TGCAGAACATCAGAAAGGGCTATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACT TTAGATGAGGAAGAGGACATGGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGT GCAAAGAATAAATACCATGTCCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAAT ATAACTTCCTGGAAAGAGATGAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCA ATTTACATTAATGTCATAAGGGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTA CGGAGACGAAAACAAGGAGACAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAA ATCCCGTTCTTCTGTGGCCATAGCTCCGAATGCTGGAATGTGGGAAGCAGGTGGGCTATGGATCAAGCCAAGTATAACCTAATTAATGAA TATTTTCTGGTGGGAGTTACTGAAGAACTTGAAGATTTTATCATGTTATTGGAGGCAGCATTGCCCCGGTTTTTCAGGGGTGCTACTGAA CTCTATCGCACAGGAAAGAAATCTCATCTTAGGAAAACCACAGAGAAGAAACTCCCCACTAAACAAACCATTGCAAAACTACAGCAATCT GATATTTGGAAAATGGAGAATGAGTTCTATGAATTTGCACTAGAGCAGTTCCAATTCATCAGAGCCCATGCCGTTCGAGAAAAAGATGGA GACCTCTACATCCTCGCACAAAACTTTTTCTATGAAAAGATTTACCCTAAGTCGAACTGAGTATAAGGTGTGACTATTGGATTCTTGAAC TAAAATTTGACCCTGTCTTCACCTTTGTTCTCAGCTCCACAGTCTGGATTGCTGACAGTAGGTGTATATGACAATTTGTATTGAGCCAAA TTAGGAAACAGACAGTAACGTCAAGGAAGTAGATACTGGCTGGCATTGTCAGTGTTCTAAGTTTCAGGCATTTTTATTTTTCCTGGCTAA ACGTTGGTGAAAGTTATAACCTCCTGCCTGGGAGAAAATATACATCACCTAAAATGAACTTATGGCAGGTCTAATCAAAAGGCTAAATAC AATTTCAGAAAAGGTTCTGATACTCTTGTTTTTGATAAAGCATTTTTTCAACTAACCATGAATTAAGATGAGTCCATTTGCCTCTTCTGC CTTCACTGAGGGTTTGGGTTATACACCTCTACTGAATTGTGTTAATAACTGTTTGGCAGTGTGTACTTTGTTTTTGTGAGTCATGTCTCA TGAAATTTATTGGAATGTTTAATCATATTTGCTAAGAAATGTTTCTGCTGTAGTTGGATTTGCCCATATTTATGTAGGTGGTTTTAATTT TTTAAATGGTGATTAGTGTTAAAAATCAATTTAAATCATGACTAATATGGTAAAAAGATAAAGCATCAAAGCAGTATTTCTCATTCCTGC CTCCTCAATATCTAATACTGGGAAGATACTTCAAAGAATATTGAGATTGTCTGAAGTTTTAGTTAAGATTTTCACACATTAATATCAAAA AAGTAAGTTTAGTATTTGTTTCTCCATGGGTTATTTGTAAAGCTGTAAACTGAGATATCGGTGACTCCGTATTATGACTCCATTAGTGAG CTGTGGTATGGGTAGGATTTTCCTACTTCTTCTGTACTTTTACCTGTAGACTATTTTTACTAAGGTGCTTTATAATGTGTTTTAAAGCAT TGCATTTACAAAACAAGGAAAATGCTGTAAATATTGCATATTTTATGTATTTGGACCAAAAGGTTACAAGTAATTAGACAAAAGTGGTTT TGCACCAATTTTATGTCAAGTAAAACCATCAGACCTACTGTTCTTGTATTTCTCATTTAACTTTACTGTTAAGACATCACTGAAATGAAC TTCAGTAAGCTTTCAATTTTGATACACAGTTCATTATTCATAACTTGAGGCAGTAATTACAGTGGAATGAGTACTGGACAAGGAGTCAAA AAACTTGATTTCAGGTCCTAGCTCTAGCACTTACAGCTGTGTGATCTTGGGCAAGTCACTTAACCTCTCTTTGCCTCAATTTCCTCATCT TGAAATGAGGATAATAATACCTGCTGTACCTACCTCACAGGGCTGTTGTGAGGATTAAATGAGATGGCATGTGAAAGCACTTTGAAAATT GTAAAGCGCTATGTAAATGTAAGGTATTATAGAAACATCTTTAACATATAGTTTCATACCATTCATTTTTTAACAAAGAAAGGGAAAAGT CTGCTTGTAAGCTGGTTGAAAAAGTTAATCTTGATATAAATTTGTGTTTGATAAATATCCTCTCAGTGTTTTATCTTCCATGTTTCAACA ACTATTGAAATATGAAATGCCTGTGAACTCTTAAAGCTTCATGAGCAGCTGCTTGAGTTCAGGAAGTTCACTGTTAGAAATAGGCTTTGT TAGCTGACTAGGGTCAGGGAAACTTTTCTCTTCAAATTTGAAAGCTGTTTCTGTTTTCATTTTACATTATTATTCAGAAATGGTAGCTAT TCTATACCTATGGTTTAAGTAAATATTTCTGAATAAGGCTTCACCATACTGTAAGCATTTTAGGTAGATTGCCTTAAAGGTTATGGGAGG GCATGAGGGAACACTTCTTATGAGAAAACATTTATAAACAAAAGAAACATTTATAAACTAAAGAAAAACTAAAAGAATGACAGAACAATC ATCTTAGCACCCTTTCCTCACAATAATATAAAAATATTAAAAGAACATAGGCAGGCTTTTTTTAAATTTGGCTTTTTTCTTTCCTTTTTT CAAATTGACTTTTATAGGTATTTCCTGAAAGTGTATACAAATTATTTCCTCGCCCAAAATAAAGCACCACTTCAAGGTGTGGTTTGACAT TACATGCTAATGAACAAACCCAGTATGCAAGTTATTCTTGCACCACATGCTCAAATCTTCTTGAGGTGCATTAACTCTTTTAGGTAACTA GAGCAGTACTTGGTGAACTAGATCAGGAGGTCAGTAAACTTTCTGTGGAAGGGCCAGAGAGTAAATATTTTAGGCTTTGCAGCCCATACG GTCTCTGTCACAGCTAGTCAACCCTGCCATTTTACCACAAAAGCAGCAATAGACATTATGTAAACAAATGAGCACAGTTATGTTCCAATA AAACTTTATTTACAAAAACAGATGACATCCCAGATGCAGACCATGGGCAACCAACCATTGCACTGGCCAAATCATTATTTATGGAGAAAT CCTCTTTGTGTCTCTACTCTAGATGCCTAAAAGAGTTTATATACTTCTAAAAGCTCCTAACTTATATCCAAAGAATTGCTTTCTGATTCG TGTAGTCTCTCCCACAGATTCATAAACTTTTATGACTTATATTGTTTCCAGGTGGGCATGGTTTATTTCCCAGTTTAACAGTTCAGAATA GGGGCATTTATTTTATCATATTTTAGGGTGGGTTAGGAGTATCCTTTCTGGAGACTGAGAAAGGGGTGTATTTAATTCCATCAGGTCCAG TACAGTACTAGGAGTCATAATACTTTATAATCAATTAAATAAATAGAACCACTGAGACAATAATGTATTTTTTTAAAGTGGCAAATGTGG TTTTCTTTTTTCAGCCTTTGCGCTTTTTCAGTATTTTGACCATAGGGAGATAATTTTTTTATAATACAAAAGTAACCACTTGGAATTTTA AAGATAATGTTATGTGTGTATGTGAAATATATATACATATATATATATATGTTTATTTCCTAAAAGAAGAAAAGATACCTTTCTGTTCAA CTTGTATCAACTCCTCTTTTCTAATTGCTGTGAAATGGCAACTGTTGATAAATTATTGTGATTGTTTTAAAATCTAATGGGAAGTAAAAT ATATTTTGATTTTACCCAGCTTAATCTGTAAAGTAGCACTTAAATATATCTGATAGCAACACTTAAGATATTGCATGGGGATTACTTTCC TATCATCCATATGCATTTGTGCAACTTCAAACATATTGGGTGCTTCTGAATTCCTGATGATTGGATTTAAGCTATTGAAAATTGGATAAT TTAAACTTAATGATTTTTATAATTTTCTGATCTTAAAATTTGGTTAATGCCTATAATCTGTTGCTTTTTCTCAATATGTGTCCTATTGGA AATTCCTCAAATCGTTGGTGCCATCAGTGATTTACAAACAATATTTTGATATTGCAGATGACTTGCTTACTGTATTTGCATTGTTAGAAA ACAGTTTGTAGACAATGATTCTTTTTTAATAAAATCAAATAATTCTAAAAGTGCTAGAGAATTTAACTAAAAGCTGGTTCCCAAATGCAT AGCTGGCATTTTAATTTAAATTCAAATCTACATAGAGAACATCTGTGTAAATCATCTAACTGGATTTTTCCATTGGTCATTCCCAAACAC ACCTATGGTCCTAGAATCCTTAAGAGAAGCACCCTGTAACCTTTTATGTGGTTTGCCTTTAAGAGGCCCAGGTGCTTCTCCTTTATGATT TGAGTTGGCCTCTTCATAAATTAGTGCTGTTTACTTTCAGAGGAAGCAGAGAAGTTGCTGTTATGTTTTTGCATCCGTTTACCCTATGCA AAGTTGCTGTATGATGCCAACTAAACTACTCTTTAGGCAGCCTTCTGAGGAGAAAAGCAACCCTGTTTCAAATCCACTGCCAATTCAGCT CCTCTGGAGTGGAGCTTTCTGATTTCTTGGAGCAGGAATTTTAGAGATTGAAATGAATGATCATTTAGTCAGATTTATCCTGTAATTTCA TGCAGCTTTGTGGCCTTTGCAGTACTATTTATAAAATGGACCCTGATGGTGATGAACTCTTTAGAACGCATTACTGTTAAGCCTGTGTTG AGACATTGATGCTGTCTATCTCATTTTTTAGACAGTTTTTGTAGCTTTCTATTGAGAGTCAGGTATGTGAGCATCTCTGAAGCAGTGTTG AATGTAATTTTCGGAAACATGGATTGTGTATTTTGACTTTTATTTTATAAATACACAGCTCAACAGTGCCTTTTTTTTCCCTCATAGTCC TGTTGGAAGATGCTCACTACTTTCTCTCTTCTCTCTCCCTGCCCTCCCCCACTCCATTCAGTTGATTCATTTATGCAAATTCTGTTTCCA ACTTGAAACCATTTTGTCACATCTGTTGGAGAGATAATCACTCCTTTTCCTTAACATTCTGCCAGCTTTCTGATGTTGAAGTGTTTCAGT TGACTACCTGATGCAAAAGCTATAAAATAAACAGTGGGAAGGGGAAAAATTGGTGTCCTGTTTTAATATTTTCTTTTGTAGCCTTGACAC TGATGGACATTTTCCAAGCTGACTCAGTGTTCAGTGTCAACTTAACTCTCAGATAGTGTTGCCATCAAGAAAGCATGCAACATCATTGGT TTCTAATGATTTTATGGCTTGTGACAATATTTTATCTGGACTGACATGCCTCTGCTGCTTTTGCTTTGTACTTCATTGCTGGTAATAAAA TTTCAGATGGAAAACTTACAAAATATATACTTAATTAGAAGAAAAAAATAGAGAAAGGGCTATTAGAATTAAAAAAATTTGAAAGTAACT TAATCTAACATTTATGGCACAGTTTGGACATATCCATAATTTTTTTTGGGAACACACATTTCTGATTTTTTTTTTCCCCCTTAAAGAAGA AAGTCTCAATTCCATTGATTTTCAATTCTTAGCCACTGGCTCATTGCTTTGAGCAATGCTTGATTGATTCTATTTATATTATATGATATT GGGTTGATAAAATACCAGTTCAATGATGAGTTTTCTTAACAGAATTTGGTTTGTACTTGCAGTGGCTGAACAAAGAGCATGGCTTGAGAA TCAAAGGGATCTGCATTTAGCAATGTGATGTCAGTAAATGGACATAACAGGATTGTTGTAAAGGTTGGGCATGATGTATGCAAAGTACTG GCCAGGGTAGACTAATAACTGATGGCATTTATATGCTGTGCTGGAATATTGTTACCAAGCTGATGTGCCGTTCTCACCCTGCAGAATACT >In-frame_ENST00000373747_ENST00000370550_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=298AA_start in transcript=513_stop in transcript=1409 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF AKFGVKKKPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTFDECVAEGGSDCAPEKLWLQIPFFCGHSSECWNVGSRWAMD QAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATELYRTGKKSHLRKTTEKKLPTKQTIAKLQQSDIWKMENEFYEFALEQFQFIR -------------------------------------------------------------- >In-frame_ENST00000373747_ENST00000356813_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=3975nt_BP=463nt GTTGTCGGAGTGAAAGGTAAGGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCG TGTTGGTGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCA AGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGC AGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAG GCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCA TGCAGAACATCAGAAAGGGCTATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACT TTAGATGAGGAAGAGGACATGGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGT GCAAAGAATAAATACCATGTCCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAAT ATAACTTCCTGGAAAGAGATGAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCA ATTTACATTAATGTCATAAGGGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTA CGGAGACGAAAACAAGGAGACAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAA ATCCCGTTCTTCTGTGGCCATAGCTCCGAATGCTGGAATGTGGGAAGCAGGTGGGCTATGGATCAAGCCAAGTATAACCTAATTAATGAA TATTTTCTGGTGGGAGTTACTGAAGAACTTGAAGATTTTATCATGTTATTGGAGGCAGCATTGCCCCGGTTTTTCAGGGGTGCTACTGAA CTCTATCGCACAGCACCAGATACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCCATCTCATCGCTTTTGGTGAAA GTCAGTCCAGTTTGTAAAGATTCTCATTGTCACTGTAGACGAGGAACTGGGACACCAAAAGGAGAAACTCTGGCCACGCTTGCACCCTGT TCCCAATCCTGGTCCAGTGTCACCCACAGATGGTAAGGAGCTCTAGAGACCTCACCAGCCCCTGGGATTGGTCACCTCACTCTTCTATGG ACAGAGATTCCTGCTGGGATCCTTTGAGGGCAAGCAGACCCTTCTTCCAGCTCGGACTGTGAACTCCACTGCAGCCGTAAGGACTGTCTG TGACAGTGAGCCCGAGATGACTGGGCTCTGTGCTCCCTCCCGGCCCTCCAATCCTTGGCCTGCCACAGAGAACTGAGCTCTTTTATTAGC ACCATGAATGTGACTGATACAGCTAGCCATTCCCTTGTGCGAATGACTCAGTTTATTAATGCTCTGCTAAAGATGGCTTCTTTGCTTGCC AGCAGCCTTAAACAGTATTTCATTAAAACTGGCTTAATTATTTTGAGAAGACGGCCCAATTAAAAGCTATACACTCCCTCTATGTGAGTG TTTATACATAGAGCTGTATATATAATACATATTTGTAAGTGTGTATATATATATGTGTGTATGTATGTGTCTATAAATATATAGGCTTAG CAATTTCATTACATGGGATAAATTGTTGGAAAAAATACCCAGGAGCTGGTCCCCTTTCTGTTGCTAGATTCAGAGTAGAGGCCACCCCTC CACTCTGGGAGAGGCTGGTGTTGGTGATCTCTCAATGACTCTGCAATGGAAGTCCCAACTGCACAGAGCCCTGCCCCAGTTTCAGGAGCC AGCAGCCTCGGAGAGGCGGATCCTGACCTCTGCTCTGCTCTTGGGATAGCCTTTCCCTTCCCAGCAGGGTTGAGATACTTGGGCCGGGAA ATGTTGTGGCAAAGTGTTTGCCAAAGCTCAGGAGAGACACAGACTTGGGGCTTTTGTTTCTTGAGCTGGCTGTCTAGCTTTCCTAATGAG CAAATATGTTCTCTTTAAGGAAACAAACAAACAAAGCAAAAACACCAATTCATCTGGATTTTATTCATTTGTTTTAAATACAAACAAACA AAAGGAGAGTGGTTATTTCTGCACCAACTATTTCAAATGCAAGTTACTCCATCGCTCGGGGTGGTTGGATGGTGCTTGTCACCATAGGAC CCACAGGGCTAGTTCCAACTGTTATTCGGTAAGGCTTTTTTCTTTCCAAAATTCCCAGTGTTCCTTTAAGGCCCATTTAGCTGCGGGTTT TGTTTATTCTCCCGGCAATCAGCATTTAAAATAAGACAAACAAGCATTTTTTCCTGGGCTGTGAATCCCCCCGGCCAGCCTCCACCTGCA CACCTGAAGCCAGCATGTCCAATCAAATTTCTCTGTAACCCATATCCCCTTTAGAGACTTGCCCCCGTCGTATACCAGGCTGGAAATAGA GAACTTAAGCAGGGCAAATGTAATTTTAAGAATTGCTAATGATGCTAGAAATCTGCAATGCAATTAGCGTCATTGGATTTGGCGCTCCTC CGAAGGCACAAAACTCCTTGTCATAGCGCAGTGGCAGCAGCGGCAAGTGCCTCCGCATGTGCCGGGCTGTCCGGGTATGCTGGCAGCCGC TTTGCACTGAGATGTGAGCAGTTGGTTAGGCTTCCTCTCTTTCTTTCTCACAGATACTGACTTCTTTGTCTCTTTTCTGGGTTGCAGAGG GATGGGTATTTTCCATTGATTATTACTTTAGCATTTGACCCTCCAGTGGAGTCACCCTGTTTTTTTTTTAGAAAACTGAGACTCTCACTT TGTGAATTCACTGTGCTCTCTGGGATTTCAGTGCTGTAGTTCAACCACCAATCCCCCTGTCCTGAACTCCAGTACTTCTGATGCTATTAA TTGGTTCCTCAACAATTGTGGCCTTTTCCATCATTGCCCACCATAGTATATACTTTTTCTTTCTCTCTCTTTTTTCTAATTTCCTTGTCT TCTTCACTCTCCATGGAGCCAGAGGTAGTATGAAGAGTTAAAAATAGGAATATAAAGAAAGCCAGAGGGACAGAGGGAGTGAGAAAGAAA AATTTTAAAAAGGGAGGAAATGAATTATTGGATTAAAAATAAACTTTTACTTTTTTGCAGAAAAATTATTTTTGCTCTCTGGGAAAATAA CATGGGCCAGGCATAAAAAGCATGTCAGCTGGCTAAAAGATTGCAAAATCCAGAAGATGATCTCGATGTGTCTGTTCAATTTAGCAAGGG TATCTACTAGGGGATCCTCTTTTAAATATGGAGGCCCAAATCAGAAGCTTGTAGAGGGGAGCTATTCTTCCAAGATTCCAGATGTGTCTG TGAGACAACACGTTATGGGGCAAATTGATTTCACCCTTGGGAAACCAGGGAGATTTTCAAAGTTATGTCTGCAAAGCCAGCTAATGCAAT TCCCCATTAGTGCATTAAAGTGCGCCCTTATTAATTCAAACATAAAGGCAACAAAATAAGCTTTTAAATTTAAAATATAATACATATATA ATGAGCATGTGTGAAAGCCTTATTCAAATGAAAATACAGGAGTGTTTGAACTACTGAGGTATCTTTTGTATTGAATTATGAGCATATGTA ATAGATTTAATTATTAATTTCCCCATTGTTCTATGCACACAGACAGGGTTCAAGGCACAGTCATTCTCTGGCTTTCATAGATCTAATTTG >In-frame_ENST00000373747_ENST00000356813_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=290AA_start in transcript=513_stop in transcript=1385 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF AKFGVKKKPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTFDECVAEGGSDCAPEKLWLQIPFFCGHSSECWNVGSRWAMD QAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATELYRTAPDTATPSHRHGPICGSKSISSLLVKVSPVCKDSHCHCRRGTGTPKG -------------------------------------------------------------- >In-frame_ENST00000426105_ENST00000370551_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=1526nt_BP=454nt GTGAAAGGTAAGGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCGTGTTGGTGG AATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGC TAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGAC TCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGG TGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACA TCAGAAAGGGCTATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACTTTAGATGAG GAAGAGGACATGGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGTGCAAAGAAT AAATACCATGTCCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAATATAACTTCC TGGAAAGAGATGAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCAATTTACATT AATGTCATAAGGGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTACGGAGACGA AAACAAGGAGACAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAAATCCCGTTC TTCTGTGGCCATAGCTCCGAATGCTGGTAGGGGAGATAAAGTTGGCTCAGATTGATTATCATCCTTATTATCTCTGTAATCTGTGTTTCA TTTCACAAGGGCTAGATATAGGGAAATCGGTGAAAGACTAGACTAAAAATAACATGTAATTCAGTAATATCTAGTTTTGCAGTTACTTTT AAATGCATTTAAAAGATTCCTCATGTAGAGTGATATCCTAATATCCTTGCATTGTTTTCTGAGATGCCGGTTTTTAGTATTTCTTATTTT TGGTGTTATGTTTTGCTGTATTCCAGCAGAGCTCTTAGAGACTGGGGGTGGGGGTGGGTGTCATAAATCTTATTTTGTCCAAAGCTTACT GTTTTAGCTATTCATGTTAAATTAAGAAAAGGCTTAGTGGGTTAAAATTCACCTGGTTTTACTGTTAAACTGATTTTGACTTTAAGAGAA >In-frame_ENST00000426105_ENST00000370551_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=171AA_start in transcript=504_stop in transcript=1019 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF -------------------------------------------------------------- >In-frame_ENST00000426105_ENST00000370550_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=6703nt_BP=454nt GTGAAAGGTAAGGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCGTGTTGGTGG AATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGC TAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGAC TCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGG TGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACA TCAGAAAGGGCTATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACTTTAGATGAG GAAGAGGACATGGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGTGCAAAGAAT AAATACCATGTCCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAATATAACTTCC TGGAAAGAGATGAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCAATTTACATT AATGTCATAAGGGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTACGGAGACGA AAACAAGGAGACAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAAATCCCGTTC TTCTGTGGCCATAGCTCCGAATGCTGGAATGTGGGAAGCAGGTGGGCTATGGATCAAGCCAAGTATAACCTAATTAATGAATATTTTCTG GTGGGAGTTACTGAAGAACTTGAAGATTTTATCATGTTATTGGAGGCAGCATTGCCCCGGTTTTTCAGGGGTGCTACTGAACTCTATCGC ACAGGAAAGAAATCTCATCTTAGGAAAACCACAGAGAAGAAACTCCCCACTAAACAAACCATTGCAAAACTACAGCAATCTGATATTTGG AAAATGGAGAATGAGTTCTATGAATTTGCACTAGAGCAGTTCCAATTCATCAGAGCCCATGCCGTTCGAGAAAAAGATGGAGACCTCTAC ATCCTCGCACAAAACTTTTTCTATGAAAAGATTTACCCTAAGTCGAACTGAGTATAAGGTGTGACTATTGGATTCTTGAACTAAAATTTG ACCCTGTCTTCACCTTTGTTCTCAGCTCCACAGTCTGGATTGCTGACAGTAGGTGTATATGACAATTTGTATTGAGCCAAATTAGGAAAC AGACAGTAACGTCAAGGAAGTAGATACTGGCTGGCATTGTCAGTGTTCTAAGTTTCAGGCATTTTTATTTTTCCTGGCTAAACGTTGGTG AAAGTTATAACCTCCTGCCTGGGAGAAAATATACATCACCTAAAATGAACTTATGGCAGGTCTAATCAAAAGGCTAAATACAATTTCAGA AAAGGTTCTGATACTCTTGTTTTTGATAAAGCATTTTTTCAACTAACCATGAATTAAGATGAGTCCATTTGCCTCTTCTGCCTTCACTGA GGGTTTGGGTTATACACCTCTACTGAATTGTGTTAATAACTGTTTGGCAGTGTGTACTTTGTTTTTGTGAGTCATGTCTCATGAAATTTA TTGGAATGTTTAATCATATTTGCTAAGAAATGTTTCTGCTGTAGTTGGATTTGCCCATATTTATGTAGGTGGTTTTAATTTTTTAAATGG TGATTAGTGTTAAAAATCAATTTAAATCATGACTAATATGGTAAAAAGATAAAGCATCAAAGCAGTATTTCTCATTCCTGCCTCCTCAAT ATCTAATACTGGGAAGATACTTCAAAGAATATTGAGATTGTCTGAAGTTTTAGTTAAGATTTTCACACATTAATATCAAAAAAGTAAGTT TAGTATTTGTTTCTCCATGGGTTATTTGTAAAGCTGTAAACTGAGATATCGGTGACTCCGTATTATGACTCCATTAGTGAGCTGTGGTAT GGGTAGGATTTTCCTACTTCTTCTGTACTTTTACCTGTAGACTATTTTTACTAAGGTGCTTTATAATGTGTTTTAAAGCATTGCATTTAC AAAACAAGGAAAATGCTGTAAATATTGCATATTTTATGTATTTGGACCAAAAGGTTACAAGTAATTAGACAAAAGTGGTTTTGCACCAAT TTTATGTCAAGTAAAACCATCAGACCTACTGTTCTTGTATTTCTCATTTAACTTTACTGTTAAGACATCACTGAAATGAACTTCAGTAAG CTTTCAATTTTGATACACAGTTCATTATTCATAACTTGAGGCAGTAATTACAGTGGAATGAGTACTGGACAAGGAGTCAAAAAACTTGAT TTCAGGTCCTAGCTCTAGCACTTACAGCTGTGTGATCTTGGGCAAGTCACTTAACCTCTCTTTGCCTCAATTTCCTCATCTTGAAATGAG GATAATAATACCTGCTGTACCTACCTCACAGGGCTGTTGTGAGGATTAAATGAGATGGCATGTGAAAGCACTTTGAAAATTGTAAAGCGC TATGTAAATGTAAGGTATTATAGAAACATCTTTAACATATAGTTTCATACCATTCATTTTTTAACAAAGAAAGGGAAAAGTCTGCTTGTA AGCTGGTTGAAAAAGTTAATCTTGATATAAATTTGTGTTTGATAAATATCCTCTCAGTGTTTTATCTTCCATGTTTCAACAACTATTGAA ATATGAAATGCCTGTGAACTCTTAAAGCTTCATGAGCAGCTGCTTGAGTTCAGGAAGTTCACTGTTAGAAATAGGCTTTGTTAGCTGACT AGGGTCAGGGAAACTTTTCTCTTCAAATTTGAAAGCTGTTTCTGTTTTCATTTTACATTATTATTCAGAAATGGTAGCTATTCTATACCT ATGGTTTAAGTAAATATTTCTGAATAAGGCTTCACCATACTGTAAGCATTTTAGGTAGATTGCCTTAAAGGTTATGGGAGGGCATGAGGG AACACTTCTTATGAGAAAACATTTATAAACAAAAGAAACATTTATAAACTAAAGAAAAACTAAAAGAATGACAGAACAATCATCTTAGCA CCCTTTCCTCACAATAATATAAAAATATTAAAAGAACATAGGCAGGCTTTTTTTAAATTTGGCTTTTTTCTTTCCTTTTTTCAAATTGAC TTTTATAGGTATTTCCTGAAAGTGTATACAAATTATTTCCTCGCCCAAAATAAAGCACCACTTCAAGGTGTGGTTTGACATTACATGCTA ATGAACAAACCCAGTATGCAAGTTATTCTTGCACCACATGCTCAAATCTTCTTGAGGTGCATTAACTCTTTTAGGTAACTAGAGCAGTAC TTGGTGAACTAGATCAGGAGGTCAGTAAACTTTCTGTGGAAGGGCCAGAGAGTAAATATTTTAGGCTTTGCAGCCCATACGGTCTCTGTC ACAGCTAGTCAACCCTGCCATTTTACCACAAAAGCAGCAATAGACATTATGTAAACAAATGAGCACAGTTATGTTCCAATAAAACTTTAT TTACAAAAACAGATGACATCCCAGATGCAGACCATGGGCAACCAACCATTGCACTGGCCAAATCATTATTTATGGAGAAATCCTCTTTGT GTCTCTACTCTAGATGCCTAAAAGAGTTTATATACTTCTAAAAGCTCCTAACTTATATCCAAAGAATTGCTTTCTGATTCGTGTAGTCTC TCCCACAGATTCATAAACTTTTATGACTTATATTGTTTCCAGGTGGGCATGGTTTATTTCCCAGTTTAACAGTTCAGAATAGGGGCATTT ATTTTATCATATTTTAGGGTGGGTTAGGAGTATCCTTTCTGGAGACTGAGAAAGGGGTGTATTTAATTCCATCAGGTCCAGTACAGTACT AGGAGTCATAATACTTTATAATCAATTAAATAAATAGAACCACTGAGACAATAATGTATTTTTTTAAAGTGGCAAATGTGGTTTTCTTTT TTCAGCCTTTGCGCTTTTTCAGTATTTTGACCATAGGGAGATAATTTTTTTATAATACAAAAGTAACCACTTGGAATTTTAAAGATAATG TTATGTGTGTATGTGAAATATATATACATATATATATATATGTTTATTTCCTAAAAGAAGAAAAGATACCTTTCTGTTCAACTTGTATCA ACTCCTCTTTTCTAATTGCTGTGAAATGGCAACTGTTGATAAATTATTGTGATTGTTTTAAAATCTAATGGGAAGTAAAATATATTTTGA TTTTACCCAGCTTAATCTGTAAAGTAGCACTTAAATATATCTGATAGCAACACTTAAGATATTGCATGGGGATTACTTTCCTATCATCCA TATGCATTTGTGCAACTTCAAACATATTGGGTGCTTCTGAATTCCTGATGATTGGATTTAAGCTATTGAAAATTGGATAATTTAAACTTA ATGATTTTTATAATTTTCTGATCTTAAAATTTGGTTAATGCCTATAATCTGTTGCTTTTTCTCAATATGTGTCCTATTGGAAATTCCTCA AATCGTTGGTGCCATCAGTGATTTACAAACAATATTTTGATATTGCAGATGACTTGCTTACTGTATTTGCATTGTTAGAAAACAGTTTGT AGACAATGATTCTTTTTTAATAAAATCAAATAATTCTAAAAGTGCTAGAGAATTTAACTAAAAGCTGGTTCCCAAATGCATAGCTGGCAT TTTAATTTAAATTCAAATCTACATAGAGAACATCTGTGTAAATCATCTAACTGGATTTTTCCATTGGTCATTCCCAAACACACCTATGGT CCTAGAATCCTTAAGAGAAGCACCCTGTAACCTTTTATGTGGTTTGCCTTTAAGAGGCCCAGGTGCTTCTCCTTTATGATTTGAGTTGGC CTCTTCATAAATTAGTGCTGTTTACTTTCAGAGGAAGCAGAGAAGTTGCTGTTATGTTTTTGCATCCGTTTACCCTATGCAAAGTTGCTG TATGATGCCAACTAAACTACTCTTTAGGCAGCCTTCTGAGGAGAAAAGCAACCCTGTTTCAAATCCACTGCCAATTCAGCTCCTCTGGAG TGGAGCTTTCTGATTTCTTGGAGCAGGAATTTTAGAGATTGAAATGAATGATCATTTAGTCAGATTTATCCTGTAATTTCATGCAGCTTT GTGGCCTTTGCAGTACTATTTATAAAATGGACCCTGATGGTGATGAACTCTTTAGAACGCATTACTGTTAAGCCTGTGTTGAGACATTGA TGCTGTCTATCTCATTTTTTAGACAGTTTTTGTAGCTTTCTATTGAGAGTCAGGTATGTGAGCATCTCTGAAGCAGTGTTGAATGTAATT TTCGGAAACATGGATTGTGTATTTTGACTTTTATTTTATAAATACACAGCTCAACAGTGCCTTTTTTTTCCCTCATAGTCCTGTTGGAAG ATGCTCACTACTTTCTCTCTTCTCTCTCCCTGCCCTCCCCCACTCCATTCAGTTGATTCATTTATGCAAATTCTGTTTCCAACTTGAAAC CATTTTGTCACATCTGTTGGAGAGATAATCACTCCTTTTCCTTAACATTCTGCCAGCTTTCTGATGTTGAAGTGTTTCAGTTGACTACCT GATGCAAAAGCTATAAAATAAACAGTGGGAAGGGGAAAAATTGGTGTCCTGTTTTAATATTTTCTTTTGTAGCCTTGACACTGATGGACA TTTTCCAAGCTGACTCAGTGTTCAGTGTCAACTTAACTCTCAGATAGTGTTGCCATCAAGAAAGCATGCAACATCATTGGTTTCTAATGA TTTTATGGCTTGTGACAATATTTTATCTGGACTGACATGCCTCTGCTGCTTTTGCTTTGTACTTCATTGCTGGTAATAAAATTTCAGATG GAAAACTTACAAAATATATACTTAATTAGAAGAAAAAAATAGAGAAAGGGCTATTAGAATTAAAAAAATTTGAAAGTAACTTAATCTAAC ATTTATGGCACAGTTTGGACATATCCATAATTTTTTTTGGGAACACACATTTCTGATTTTTTTTTTCCCCCTTAAAGAAGAAAGTCTCAA TTCCATTGATTTTCAATTCTTAGCCACTGGCTCATTGCTTTGAGCAATGCTTGATTGATTCTATTTATATTATATGATATTGGGTTGATA AAATACCAGTTCAATGATGAGTTTTCTTAACAGAATTTGGTTTGTACTTGCAGTGGCTGAACAAAGAGCATGGCTTGAGAATCAAAGGGA TCTGCATTTAGCAATGTGATGTCAGTAAATGGACATAACAGGATTGTTGTAAAGGTTGGGCATGATGTATGCAAAGTACTGGCCAGGGTA GACTAATAACTGATGGCATTTATATGCTGTGCTGGAATATTGTTACCAAGCTGATGTGCCGTTCTCACCCTGCAGAATACTGGTTTTGTC >In-frame_ENST00000426105_ENST00000370550_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=298AA_start in transcript=504_stop in transcript=1400 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF AKFGVKKKPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTFDECVAEGGSDCAPEKLWLQIPFFCGHSSECWNVGSRWAMD QAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATELYRTGKKSHLRKTTEKKLPTKQTIAKLQQSDIWKMENEFYEFALEQFQFIR -------------------------------------------------------------- >In-frame_ENST00000426105_ENST00000356813_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=3966nt_BP=454nt GTGAAAGGTAAGGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCGTGTTGGTGG AATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGC TAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGAC TCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGG TGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACA TCAGAAAGGGCTATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACTTTAGATGAG GAAGAGGACATGGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGTGCAAAGAAT AAATACCATGTCCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAATATAACTTCC TGGAAAGAGATGAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCAATTTACATT AATGTCATAAGGGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTACGGAGACGA AAACAAGGAGACAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAAATCCCGTTC TTCTGTGGCCATAGCTCCGAATGCTGGAATGTGGGAAGCAGGTGGGCTATGGATCAAGCCAAGTATAACCTAATTAATGAATATTTTCTG GTGGGAGTTACTGAAGAACTTGAAGATTTTATCATGTTATTGGAGGCAGCATTGCCCCGGTTTTTCAGGGGTGCTACTGAACTCTATCGC ACAGCACCAGATACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCCATCTCATCGCTTTTGGTGAAAGTCAGTCCA GTTTGTAAAGATTCTCATTGTCACTGTAGACGAGGAACTGGGACACCAAAAGGAGAAACTCTGGCCACGCTTGCACCCTGTTCCCAATCC TGGTCCAGTGTCACCCACAGATGGTAAGGAGCTCTAGAGACCTCACCAGCCCCTGGGATTGGTCACCTCACTCTTCTATGGACAGAGATT CCTGCTGGGATCCTTTGAGGGCAAGCAGACCCTTCTTCCAGCTCGGACTGTGAACTCCACTGCAGCCGTAAGGACTGTCTGTGACAGTGA GCCCGAGATGACTGGGCTCTGTGCTCCCTCCCGGCCCTCCAATCCTTGGCCTGCCACAGAGAACTGAGCTCTTTTATTAGCACCATGAAT GTGACTGATACAGCTAGCCATTCCCTTGTGCGAATGACTCAGTTTATTAATGCTCTGCTAAAGATGGCTTCTTTGCTTGCCAGCAGCCTT AAACAGTATTTCATTAAAACTGGCTTAATTATTTTGAGAAGACGGCCCAATTAAAAGCTATACACTCCCTCTATGTGAGTGTTTATACAT AGAGCTGTATATATAATACATATTTGTAAGTGTGTATATATATATGTGTGTATGTATGTGTCTATAAATATATAGGCTTAGCAATTTCAT TACATGGGATAAATTGTTGGAAAAAATACCCAGGAGCTGGTCCCCTTTCTGTTGCTAGATTCAGAGTAGAGGCCACCCCTCCACTCTGGG AGAGGCTGGTGTTGGTGATCTCTCAATGACTCTGCAATGGAAGTCCCAACTGCACAGAGCCCTGCCCCAGTTTCAGGAGCCAGCAGCCTC GGAGAGGCGGATCCTGACCTCTGCTCTGCTCTTGGGATAGCCTTTCCCTTCCCAGCAGGGTTGAGATACTTGGGCCGGGAAATGTTGTGG CAAAGTGTTTGCCAAAGCTCAGGAGAGACACAGACTTGGGGCTTTTGTTTCTTGAGCTGGCTGTCTAGCTTTCCTAATGAGCAAATATGT TCTCTTTAAGGAAACAAACAAACAAAGCAAAAACACCAATTCATCTGGATTTTATTCATTTGTTTTAAATACAAACAAACAAAAGGAGAG TGGTTATTTCTGCACCAACTATTTCAAATGCAAGTTACTCCATCGCTCGGGGTGGTTGGATGGTGCTTGTCACCATAGGACCCACAGGGC TAGTTCCAACTGTTATTCGGTAAGGCTTTTTTCTTTCCAAAATTCCCAGTGTTCCTTTAAGGCCCATTTAGCTGCGGGTTTTGTTTATTC TCCCGGCAATCAGCATTTAAAATAAGACAAACAAGCATTTTTTCCTGGGCTGTGAATCCCCCCGGCCAGCCTCCACCTGCACACCTGAAG CCAGCATGTCCAATCAAATTTCTCTGTAACCCATATCCCCTTTAGAGACTTGCCCCCGTCGTATACCAGGCTGGAAATAGAGAACTTAAG CAGGGCAAATGTAATTTTAAGAATTGCTAATGATGCTAGAAATCTGCAATGCAATTAGCGTCATTGGATTTGGCGCTCCTCCGAAGGCAC AAAACTCCTTGTCATAGCGCAGTGGCAGCAGCGGCAAGTGCCTCCGCATGTGCCGGGCTGTCCGGGTATGCTGGCAGCCGCTTTGCACTG AGATGTGAGCAGTTGGTTAGGCTTCCTCTCTTTCTTTCTCACAGATACTGACTTCTTTGTCTCTTTTCTGGGTTGCAGAGGGATGGGTAT TTTCCATTGATTATTACTTTAGCATTTGACCCTCCAGTGGAGTCACCCTGTTTTTTTTTTAGAAAACTGAGACTCTCACTTTGTGAATTC ACTGTGCTCTCTGGGATTTCAGTGCTGTAGTTCAACCACCAATCCCCCTGTCCTGAACTCCAGTACTTCTGATGCTATTAATTGGTTCCT CAACAATTGTGGCCTTTTCCATCATTGCCCACCATAGTATATACTTTTTCTTTCTCTCTCTTTTTTCTAATTTCCTTGTCTTCTTCACTC TCCATGGAGCCAGAGGTAGTATGAAGAGTTAAAAATAGGAATATAAAGAAAGCCAGAGGGACAGAGGGAGTGAGAAAGAAAAATTTTAAA AAGGGAGGAAATGAATTATTGGATTAAAAATAAACTTTTACTTTTTTGCAGAAAAATTATTTTTGCTCTCTGGGAAAATAACATGGGCCA GGCATAAAAAGCATGTCAGCTGGCTAAAAGATTGCAAAATCCAGAAGATGATCTCGATGTGTCTGTTCAATTTAGCAAGGGTATCTACTA GGGGATCCTCTTTTAAATATGGAGGCCCAAATCAGAAGCTTGTAGAGGGGAGCTATTCTTCCAAGATTCCAGATGTGTCTGTGAGACAAC ACGTTATGGGGCAAATTGATTTCACCCTTGGGAAACCAGGGAGATTTTCAAAGTTATGTCTGCAAAGCCAGCTAATGCAATTCCCCATTA GTGCATTAAAGTGCGCCCTTATTAATTCAAACATAAAGGCAACAAAATAAGCTTTTAAATTTAAAATATAATACATATATAATGAGCATG TGTGAAAGCCTTATTCAAATGAAAATACAGGAGTGTTTGAACTACTGAGGTATCTTTTGTATTGAATTATGAGCATATGTAATAGATTTA ATTATTAATTTCCCCATTGTTCTATGCACACAGACAGGGTTCAAGGCACAGTCATTCTCTGGCTTTCATAGATCTAATTTGTATAATTAT >In-frame_ENST00000426105_ENST00000356813_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=290AA_start in transcript=504_stop in transcript=1376 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF AKFGVKKKPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTFDECVAEGGSDCAPEKLWLQIPFFCGHSSECWNVGSRWAMD QAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATELYRTAPDTATPSHRHGPICGSKSISSLLVKVSPVCKDSHCHCRRGTGTPKG -------------------------------------------------------------- >In-frame_ENST00000440538_ENST00000370551_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=1515nt_BP=443nt GGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCGTGTTGGTGGAATGAGCGTTG CATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGCTAATCCCAACA TGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGACTCACTCCAGCC CTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTGAGCAGCTTG GGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACATCAGAAAGGGC TATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACTTTAGATGAGGAAGAGGACAT GGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGTGCAAAGAATAAATACCATGT CCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAATATAACTTCCTGGAAAGAGAT GAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCAATTTACATTAATGTCATAAG GGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTACGGAGACGAAAACAAGGAGA CAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAAATCCCGTTCTTCTGTGGCCA TAGCTCCGAATGCTGGTAGGGGAGATAAAGTTGGCTCAGATTGATTATCATCCTTATTATCTCTGTAATCTGTGTTTCATTTCACAAGGG CTAGATATAGGGAAATCGGTGAAAGACTAGACTAAAAATAACATGTAATTCAGTAATATCTAGTTTTGCAGTTACTTTTAAATGCATTTA AAAGATTCCTCATGTAGAGTGATATCCTAATATCCTTGCATTGTTTTCTGAGATGCCGGTTTTTAGTATTTCTTATTTTTGGTGTTATGT TTTGCTGTATTCCAGCAGAGCTCTTAGAGACTGGGGGTGGGGGTGGGTGTCATAAATCTTATTTTGTCCAAAGCTTACTGTTTTAGCTAT TCATGTTAAATTAAGAAAAGGCTTAGTGGGTTAAAATTCACCTGGTTTTACTGTTAAACTGATTTTGACTTTAAGAGAAGCCAAGGTTAT >In-frame_ENST00000440538_ENST00000370551_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=171AA_start in transcript=493_stop in transcript=1008 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF -------------------------------------------------------------- >In-frame_ENST00000440538_ENST00000370550_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=6692nt_BP=443nt GGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCGTGTTGGTGGAATGAGCGTTG CATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGCTAATCCCAACA TGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGACTCACTCCAGCC CTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTGAGCAGCTTG GGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACATCAGAAAGGGC TATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACTTTAGATGAGGAAGAGGACAT GGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGTGCAAAGAATAAATACCATGT CCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAATATAACTTCCTGGAAAGAGAT GAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCAATTTACATTAATGTCATAAG GGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTACGGAGACGAAAACAAGGAGA CAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAAATCCCGTTCTTCTGTGGCCA TAGCTCCGAATGCTGGAATGTGGGAAGCAGGTGGGCTATGGATCAAGCCAAGTATAACCTAATTAATGAATATTTTCTGGTGGGAGTTAC TGAAGAACTTGAAGATTTTATCATGTTATTGGAGGCAGCATTGCCCCGGTTTTTCAGGGGTGCTACTGAACTCTATCGCACAGGAAAGAA ATCTCATCTTAGGAAAACCACAGAGAAGAAACTCCCCACTAAACAAACCATTGCAAAACTACAGCAATCTGATATTTGGAAAATGGAGAA TGAGTTCTATGAATTTGCACTAGAGCAGTTCCAATTCATCAGAGCCCATGCCGTTCGAGAAAAAGATGGAGACCTCTACATCCTCGCACA AAACTTTTTCTATGAAAAGATTTACCCTAAGTCGAACTGAGTATAAGGTGTGACTATTGGATTCTTGAACTAAAATTTGACCCTGTCTTC ACCTTTGTTCTCAGCTCCACAGTCTGGATTGCTGACAGTAGGTGTATATGACAATTTGTATTGAGCCAAATTAGGAAACAGACAGTAACG TCAAGGAAGTAGATACTGGCTGGCATTGTCAGTGTTCTAAGTTTCAGGCATTTTTATTTTTCCTGGCTAAACGTTGGTGAAAGTTATAAC CTCCTGCCTGGGAGAAAATATACATCACCTAAAATGAACTTATGGCAGGTCTAATCAAAAGGCTAAATACAATTTCAGAAAAGGTTCTGA TACTCTTGTTTTTGATAAAGCATTTTTTCAACTAACCATGAATTAAGATGAGTCCATTTGCCTCTTCTGCCTTCACTGAGGGTTTGGGTT ATACACCTCTACTGAATTGTGTTAATAACTGTTTGGCAGTGTGTACTTTGTTTTTGTGAGTCATGTCTCATGAAATTTATTGGAATGTTT AATCATATTTGCTAAGAAATGTTTCTGCTGTAGTTGGATTTGCCCATATTTATGTAGGTGGTTTTAATTTTTTAAATGGTGATTAGTGTT AAAAATCAATTTAAATCATGACTAATATGGTAAAAAGATAAAGCATCAAAGCAGTATTTCTCATTCCTGCCTCCTCAATATCTAATACTG GGAAGATACTTCAAAGAATATTGAGATTGTCTGAAGTTTTAGTTAAGATTTTCACACATTAATATCAAAAAAGTAAGTTTAGTATTTGTT TCTCCATGGGTTATTTGTAAAGCTGTAAACTGAGATATCGGTGACTCCGTATTATGACTCCATTAGTGAGCTGTGGTATGGGTAGGATTT TCCTACTTCTTCTGTACTTTTACCTGTAGACTATTTTTACTAAGGTGCTTTATAATGTGTTTTAAAGCATTGCATTTACAAAACAAGGAA AATGCTGTAAATATTGCATATTTTATGTATTTGGACCAAAAGGTTACAAGTAATTAGACAAAAGTGGTTTTGCACCAATTTTATGTCAAG TAAAACCATCAGACCTACTGTTCTTGTATTTCTCATTTAACTTTACTGTTAAGACATCACTGAAATGAACTTCAGTAAGCTTTCAATTTT GATACACAGTTCATTATTCATAACTTGAGGCAGTAATTACAGTGGAATGAGTACTGGACAAGGAGTCAAAAAACTTGATTTCAGGTCCTA GCTCTAGCACTTACAGCTGTGTGATCTTGGGCAAGTCACTTAACCTCTCTTTGCCTCAATTTCCTCATCTTGAAATGAGGATAATAATAC CTGCTGTACCTACCTCACAGGGCTGTTGTGAGGATTAAATGAGATGGCATGTGAAAGCACTTTGAAAATTGTAAAGCGCTATGTAAATGT AAGGTATTATAGAAACATCTTTAACATATAGTTTCATACCATTCATTTTTTAACAAAGAAAGGGAAAAGTCTGCTTGTAAGCTGGTTGAA AAAGTTAATCTTGATATAAATTTGTGTTTGATAAATATCCTCTCAGTGTTTTATCTTCCATGTTTCAACAACTATTGAAATATGAAATGC CTGTGAACTCTTAAAGCTTCATGAGCAGCTGCTTGAGTTCAGGAAGTTCACTGTTAGAAATAGGCTTTGTTAGCTGACTAGGGTCAGGGA AACTTTTCTCTTCAAATTTGAAAGCTGTTTCTGTTTTCATTTTACATTATTATTCAGAAATGGTAGCTATTCTATACCTATGGTTTAAGT AAATATTTCTGAATAAGGCTTCACCATACTGTAAGCATTTTAGGTAGATTGCCTTAAAGGTTATGGGAGGGCATGAGGGAACACTTCTTA TGAGAAAACATTTATAAACAAAAGAAACATTTATAAACTAAAGAAAAACTAAAAGAATGACAGAACAATCATCTTAGCACCCTTTCCTCA CAATAATATAAAAATATTAAAAGAACATAGGCAGGCTTTTTTTAAATTTGGCTTTTTTCTTTCCTTTTTTCAAATTGACTTTTATAGGTA TTTCCTGAAAGTGTATACAAATTATTTCCTCGCCCAAAATAAAGCACCACTTCAAGGTGTGGTTTGACATTACATGCTAATGAACAAACC CAGTATGCAAGTTATTCTTGCACCACATGCTCAAATCTTCTTGAGGTGCATTAACTCTTTTAGGTAACTAGAGCAGTACTTGGTGAACTA GATCAGGAGGTCAGTAAACTTTCTGTGGAAGGGCCAGAGAGTAAATATTTTAGGCTTTGCAGCCCATACGGTCTCTGTCACAGCTAGTCA ACCCTGCCATTTTACCACAAAAGCAGCAATAGACATTATGTAAACAAATGAGCACAGTTATGTTCCAATAAAACTTTATTTACAAAAACA GATGACATCCCAGATGCAGACCATGGGCAACCAACCATTGCACTGGCCAAATCATTATTTATGGAGAAATCCTCTTTGTGTCTCTACTCT AGATGCCTAAAAGAGTTTATATACTTCTAAAAGCTCCTAACTTATATCCAAAGAATTGCTTTCTGATTCGTGTAGTCTCTCCCACAGATT CATAAACTTTTATGACTTATATTGTTTCCAGGTGGGCATGGTTTATTTCCCAGTTTAACAGTTCAGAATAGGGGCATTTATTTTATCATA TTTTAGGGTGGGTTAGGAGTATCCTTTCTGGAGACTGAGAAAGGGGTGTATTTAATTCCATCAGGTCCAGTACAGTACTAGGAGTCATAA TACTTTATAATCAATTAAATAAATAGAACCACTGAGACAATAATGTATTTTTTTAAAGTGGCAAATGTGGTTTTCTTTTTTCAGCCTTTG CGCTTTTTCAGTATTTTGACCATAGGGAGATAATTTTTTTATAATACAAAAGTAACCACTTGGAATTTTAAAGATAATGTTATGTGTGTA TGTGAAATATATATACATATATATATATATGTTTATTTCCTAAAAGAAGAAAAGATACCTTTCTGTTCAACTTGTATCAACTCCTCTTTT CTAATTGCTGTGAAATGGCAACTGTTGATAAATTATTGTGATTGTTTTAAAATCTAATGGGAAGTAAAATATATTTTGATTTTACCCAGC TTAATCTGTAAAGTAGCACTTAAATATATCTGATAGCAACACTTAAGATATTGCATGGGGATTACTTTCCTATCATCCATATGCATTTGT GCAACTTCAAACATATTGGGTGCTTCTGAATTCCTGATGATTGGATTTAAGCTATTGAAAATTGGATAATTTAAACTTAATGATTTTTAT AATTTTCTGATCTTAAAATTTGGTTAATGCCTATAATCTGTTGCTTTTTCTCAATATGTGTCCTATTGGAAATTCCTCAAATCGTTGGTG CCATCAGTGATTTACAAACAATATTTTGATATTGCAGATGACTTGCTTACTGTATTTGCATTGTTAGAAAACAGTTTGTAGACAATGATT CTTTTTTAATAAAATCAAATAATTCTAAAAGTGCTAGAGAATTTAACTAAAAGCTGGTTCCCAAATGCATAGCTGGCATTTTAATTTAAA TTCAAATCTACATAGAGAACATCTGTGTAAATCATCTAACTGGATTTTTCCATTGGTCATTCCCAAACACACCTATGGTCCTAGAATCCT TAAGAGAAGCACCCTGTAACCTTTTATGTGGTTTGCCTTTAAGAGGCCCAGGTGCTTCTCCTTTATGATTTGAGTTGGCCTCTTCATAAA TTAGTGCTGTTTACTTTCAGAGGAAGCAGAGAAGTTGCTGTTATGTTTTTGCATCCGTTTACCCTATGCAAAGTTGCTGTATGATGCCAA CTAAACTACTCTTTAGGCAGCCTTCTGAGGAGAAAAGCAACCCTGTTTCAAATCCACTGCCAATTCAGCTCCTCTGGAGTGGAGCTTTCT GATTTCTTGGAGCAGGAATTTTAGAGATTGAAATGAATGATCATTTAGTCAGATTTATCCTGTAATTTCATGCAGCTTTGTGGCCTTTGC AGTACTATTTATAAAATGGACCCTGATGGTGATGAACTCTTTAGAACGCATTACTGTTAAGCCTGTGTTGAGACATTGATGCTGTCTATC TCATTTTTTAGACAGTTTTTGTAGCTTTCTATTGAGAGTCAGGTATGTGAGCATCTCTGAAGCAGTGTTGAATGTAATTTTCGGAAACAT GGATTGTGTATTTTGACTTTTATTTTATAAATACACAGCTCAACAGTGCCTTTTTTTTCCCTCATAGTCCTGTTGGAAGATGCTCACTAC TTTCTCTCTTCTCTCTCCCTGCCCTCCCCCACTCCATTCAGTTGATTCATTTATGCAAATTCTGTTTCCAACTTGAAACCATTTTGTCAC ATCTGTTGGAGAGATAATCACTCCTTTTCCTTAACATTCTGCCAGCTTTCTGATGTTGAAGTGTTTCAGTTGACTACCTGATGCAAAAGC TATAAAATAAACAGTGGGAAGGGGAAAAATTGGTGTCCTGTTTTAATATTTTCTTTTGTAGCCTTGACACTGATGGACATTTTCCAAGCT GACTCAGTGTTCAGTGTCAACTTAACTCTCAGATAGTGTTGCCATCAAGAAAGCATGCAACATCATTGGTTTCTAATGATTTTATGGCTT GTGACAATATTTTATCTGGACTGACATGCCTCTGCTGCTTTTGCTTTGTACTTCATTGCTGGTAATAAAATTTCAGATGGAAAACTTACA AAATATATACTTAATTAGAAGAAAAAAATAGAGAAAGGGCTATTAGAATTAAAAAAATTTGAAAGTAACTTAATCTAACATTTATGGCAC AGTTTGGACATATCCATAATTTTTTTTGGGAACACACATTTCTGATTTTTTTTTTCCCCCTTAAAGAAGAAAGTCTCAATTCCATTGATT TTCAATTCTTAGCCACTGGCTCATTGCTTTGAGCAATGCTTGATTGATTCTATTTATATTATATGATATTGGGTTGATAAAATACCAGTT CAATGATGAGTTTTCTTAACAGAATTTGGTTTGTACTTGCAGTGGCTGAACAAAGAGCATGGCTTGAGAATCAAAGGGATCTGCATTTAG CAATGTGATGTCAGTAAATGGACATAACAGGATTGTTGTAAAGGTTGGGCATGATGTATGCAAAGTACTGGCCAGGGTAGACTAATAACT GATGGCATTTATATGCTGTGCTGGAATATTGTTACCAAGCTGATGTGCCGTTCTCACCCTGCAGAATACTGGTTTTGTCATTTCATAAAT >In-frame_ENST00000440538_ENST00000370550_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=298AA_start in transcript=493_stop in transcript=1389 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF AKFGVKKKPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTFDECVAEGGSDCAPEKLWLQIPFFCGHSSECWNVGSRWAMD QAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATELYRTGKKSHLRKTTEKKLPTKQTIAKLQQSDIWKMENEFYEFALEQFQFIR -------------------------------------------------------------- >In-frame_ENST00000440538_ENST00000356813_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=3955nt_BP=443nt GGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCGTGTTGGTGGAATGAGCGTTG CATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGCTAATCCCAACA TGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGACTCACTCCAGCC CTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTGAGCAGCTTG GGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACATCAGAAAGGGC TATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACTTTAGATGAGGAAGAGGACAT GGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGTGCAAAGAATAAATACCATGT CCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAATATAACTTCCTGGAAAGAGAT GAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCAATTTACATTAATGTCATAAG GGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTACGGAGACGAAAACAAGGAGA CAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAAATCCCGTTCTTCTGTGGCCA TAGCTCCGAATGCTGGAATGTGGGAAGCAGGTGGGCTATGGATCAAGCCAAGTATAACCTAATTAATGAATATTTTCTGGTGGGAGTTAC TGAAGAACTTGAAGATTTTATCATGTTATTGGAGGCAGCATTGCCCCGGTTTTTCAGGGGTGCTACTGAACTCTATCGCACAGCACCAGA TACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCCATCTCATCGCTTTTGGTGAAAGTCAGTCCAGTTTGTAAAGA TTCTCATTGTCACTGTAGACGAGGAACTGGGACACCAAAAGGAGAAACTCTGGCCACGCTTGCACCCTGTTCCCAATCCTGGTCCAGTGT CACCCACAGATGGTAAGGAGCTCTAGAGACCTCACCAGCCCCTGGGATTGGTCACCTCACTCTTCTATGGACAGAGATTCCTGCTGGGAT CCTTTGAGGGCAAGCAGACCCTTCTTCCAGCTCGGACTGTGAACTCCACTGCAGCCGTAAGGACTGTCTGTGACAGTGAGCCCGAGATGA CTGGGCTCTGTGCTCCCTCCCGGCCCTCCAATCCTTGGCCTGCCACAGAGAACTGAGCTCTTTTATTAGCACCATGAATGTGACTGATAC AGCTAGCCATTCCCTTGTGCGAATGACTCAGTTTATTAATGCTCTGCTAAAGATGGCTTCTTTGCTTGCCAGCAGCCTTAAACAGTATTT CATTAAAACTGGCTTAATTATTTTGAGAAGACGGCCCAATTAAAAGCTATACACTCCCTCTATGTGAGTGTTTATACATAGAGCTGTATA TATAATACATATTTGTAAGTGTGTATATATATATGTGTGTATGTATGTGTCTATAAATATATAGGCTTAGCAATTTCATTACATGGGATA AATTGTTGGAAAAAATACCCAGGAGCTGGTCCCCTTTCTGTTGCTAGATTCAGAGTAGAGGCCACCCCTCCACTCTGGGAGAGGCTGGTG TTGGTGATCTCTCAATGACTCTGCAATGGAAGTCCCAACTGCACAGAGCCCTGCCCCAGTTTCAGGAGCCAGCAGCCTCGGAGAGGCGGA TCCTGACCTCTGCTCTGCTCTTGGGATAGCCTTTCCCTTCCCAGCAGGGTTGAGATACTTGGGCCGGGAAATGTTGTGGCAAAGTGTTTG CCAAAGCTCAGGAGAGACACAGACTTGGGGCTTTTGTTTCTTGAGCTGGCTGTCTAGCTTTCCTAATGAGCAAATATGTTCTCTTTAAGG AAACAAACAAACAAAGCAAAAACACCAATTCATCTGGATTTTATTCATTTGTTTTAAATACAAACAAACAAAAGGAGAGTGGTTATTTCT GCACCAACTATTTCAAATGCAAGTTACTCCATCGCTCGGGGTGGTTGGATGGTGCTTGTCACCATAGGACCCACAGGGCTAGTTCCAACT GTTATTCGGTAAGGCTTTTTTCTTTCCAAAATTCCCAGTGTTCCTTTAAGGCCCATTTAGCTGCGGGTTTTGTTTATTCTCCCGGCAATC AGCATTTAAAATAAGACAAACAAGCATTTTTTCCTGGGCTGTGAATCCCCCCGGCCAGCCTCCACCTGCACACCTGAAGCCAGCATGTCC AATCAAATTTCTCTGTAACCCATATCCCCTTTAGAGACTTGCCCCCGTCGTATACCAGGCTGGAAATAGAGAACTTAAGCAGGGCAAATG TAATTTTAAGAATTGCTAATGATGCTAGAAATCTGCAATGCAATTAGCGTCATTGGATTTGGCGCTCCTCCGAAGGCACAAAACTCCTTG TCATAGCGCAGTGGCAGCAGCGGCAAGTGCCTCCGCATGTGCCGGGCTGTCCGGGTATGCTGGCAGCCGCTTTGCACTGAGATGTGAGCA GTTGGTTAGGCTTCCTCTCTTTCTTTCTCACAGATACTGACTTCTTTGTCTCTTTTCTGGGTTGCAGAGGGATGGGTATTTTCCATTGAT TATTACTTTAGCATTTGACCCTCCAGTGGAGTCACCCTGTTTTTTTTTTAGAAAACTGAGACTCTCACTTTGTGAATTCACTGTGCTCTC TGGGATTTCAGTGCTGTAGTTCAACCACCAATCCCCCTGTCCTGAACTCCAGTACTTCTGATGCTATTAATTGGTTCCTCAACAATTGTG GCCTTTTCCATCATTGCCCACCATAGTATATACTTTTTCTTTCTCTCTCTTTTTTCTAATTTCCTTGTCTTCTTCACTCTCCATGGAGCC AGAGGTAGTATGAAGAGTTAAAAATAGGAATATAAAGAAAGCCAGAGGGACAGAGGGAGTGAGAAAGAAAAATTTTAAAAAGGGAGGAAA TGAATTATTGGATTAAAAATAAACTTTTACTTTTTTGCAGAAAAATTATTTTTGCTCTCTGGGAAAATAACATGGGCCAGGCATAAAAAG CATGTCAGCTGGCTAAAAGATTGCAAAATCCAGAAGATGATCTCGATGTGTCTGTTCAATTTAGCAAGGGTATCTACTAGGGGATCCTCT TTTAAATATGGAGGCCCAAATCAGAAGCTTGTAGAGGGGAGCTATTCTTCCAAGATTCCAGATGTGTCTGTGAGACAACACGTTATGGGG CAAATTGATTTCACCCTTGGGAAACCAGGGAGATTTTCAAAGTTATGTCTGCAAAGCCAGCTAATGCAATTCCCCATTAGTGCATTAAAG TGCGCCCTTATTAATTCAAACATAAAGGCAACAAAATAAGCTTTTAAATTTAAAATATAATACATATATAATGAGCATGTGTGAAAGCCT TATTCAAATGAAAATACAGGAGTGTTTGAACTACTGAGGTATCTTTTGTATTGAATTATGAGCATATGTAATAGATTTAATTATTAATTT >In-frame_ENST00000440538_ENST00000356813_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=290AA_start in transcript=493_stop in transcript=1365 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF AKFGVKKKPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTFDECVAEGGSDCAPEKLWLQIPFFCGHSSECWNVGSRWAMD QAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATELYRTAPDTATPSHRHGPICGSKSISSLLVKVSPVCKDSHCHCRRGTGTPKG -------------------------------------------------------------- >In-frame_ENST00000423018_ENST00000370551_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=1524nt_BP=452nt GAAAGGTAAGGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCGTGTTGGTGGAA TGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGCTA ATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGACTC ACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTG AGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACATC AGAAAGGGCTATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACTTTAGATGAGGA AGAGGACATGGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGTGCAAAGAATAA ATACCATGTCCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAATATAACTTCCTG GAAAGAGATGAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCAATTTACATTAA TGTCATAAGGGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTACGGAGACGAAA ACAAGGAGACAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAAATCCCGTTCTT CTGTGGCCATAGCTCCGAATGCTGGTAGGGGAGATAAAGTTGGCTCAGATTGATTATCATCCTTATTATCTCTGTAATCTGTGTTTCATT TCACAAGGGCTAGATATAGGGAAATCGGTGAAAGACTAGACTAAAAATAACATGTAATTCAGTAATATCTAGTTTTGCAGTTACTTTTAA ATGCATTTAAAAGATTCCTCATGTAGAGTGATATCCTAATATCCTTGCATTGTTTTCTGAGATGCCGGTTTTTAGTATTTCTTATTTTTG GTGTTATGTTTTGCTGTATTCCAGCAGAGCTCTTAGAGACTGGGGGTGGGGGTGGGTGTCATAAATCTTATTTTGTCCAAAGCTTACTGT TTTAGCTATTCATGTTAAATTAAGAAAAGGCTTAGTGGGTTAAAATTCACCTGGTTTTACTGTTAAACTGATTTTGACTTTAAGAGAAGC >In-frame_ENST00000423018_ENST00000370551_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=171AA_start in transcript=502_stop in transcript=1017 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF -------------------------------------------------------------- >In-frame_ENST00000423018_ENST00000370550_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=6701nt_BP=452nt GAAAGGTAAGGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCGTGTTGGTGGAA TGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGCTA ATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGACTC ACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTG AGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACATC AGAAAGGGCTATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACTTTAGATGAGGA AGAGGACATGGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGTGCAAAGAATAA ATACCATGTCCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAATATAACTTCCTG GAAAGAGATGAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCAATTTACATTAA TGTCATAAGGGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTACGGAGACGAAA ACAAGGAGACAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAAATCCCGTTCTT CTGTGGCCATAGCTCCGAATGCTGGAATGTGGGAAGCAGGTGGGCTATGGATCAAGCCAAGTATAACCTAATTAATGAATATTTTCTGGT GGGAGTTACTGAAGAACTTGAAGATTTTATCATGTTATTGGAGGCAGCATTGCCCCGGTTTTTCAGGGGTGCTACTGAACTCTATCGCAC AGGAAAGAAATCTCATCTTAGGAAAACCACAGAGAAGAAACTCCCCACTAAACAAACCATTGCAAAACTACAGCAATCTGATATTTGGAA AATGGAGAATGAGTTCTATGAATTTGCACTAGAGCAGTTCCAATTCATCAGAGCCCATGCCGTTCGAGAAAAAGATGGAGACCTCTACAT CCTCGCACAAAACTTTTTCTATGAAAAGATTTACCCTAAGTCGAACTGAGTATAAGGTGTGACTATTGGATTCTTGAACTAAAATTTGAC CCTGTCTTCACCTTTGTTCTCAGCTCCACAGTCTGGATTGCTGACAGTAGGTGTATATGACAATTTGTATTGAGCCAAATTAGGAAACAG ACAGTAACGTCAAGGAAGTAGATACTGGCTGGCATTGTCAGTGTTCTAAGTTTCAGGCATTTTTATTTTTCCTGGCTAAACGTTGGTGAA AGTTATAACCTCCTGCCTGGGAGAAAATATACATCACCTAAAATGAACTTATGGCAGGTCTAATCAAAAGGCTAAATACAATTTCAGAAA AGGTTCTGATACTCTTGTTTTTGATAAAGCATTTTTTCAACTAACCATGAATTAAGATGAGTCCATTTGCCTCTTCTGCCTTCACTGAGG GTTTGGGTTATACACCTCTACTGAATTGTGTTAATAACTGTTTGGCAGTGTGTACTTTGTTTTTGTGAGTCATGTCTCATGAAATTTATT GGAATGTTTAATCATATTTGCTAAGAAATGTTTCTGCTGTAGTTGGATTTGCCCATATTTATGTAGGTGGTTTTAATTTTTTAAATGGTG ATTAGTGTTAAAAATCAATTTAAATCATGACTAATATGGTAAAAAGATAAAGCATCAAAGCAGTATTTCTCATTCCTGCCTCCTCAATAT CTAATACTGGGAAGATACTTCAAAGAATATTGAGATTGTCTGAAGTTTTAGTTAAGATTTTCACACATTAATATCAAAAAAGTAAGTTTA GTATTTGTTTCTCCATGGGTTATTTGTAAAGCTGTAAACTGAGATATCGGTGACTCCGTATTATGACTCCATTAGTGAGCTGTGGTATGG GTAGGATTTTCCTACTTCTTCTGTACTTTTACCTGTAGACTATTTTTACTAAGGTGCTTTATAATGTGTTTTAAAGCATTGCATTTACAA AACAAGGAAAATGCTGTAAATATTGCATATTTTATGTATTTGGACCAAAAGGTTACAAGTAATTAGACAAAAGTGGTTTTGCACCAATTT TATGTCAAGTAAAACCATCAGACCTACTGTTCTTGTATTTCTCATTTAACTTTACTGTTAAGACATCACTGAAATGAACTTCAGTAAGCT TTCAATTTTGATACACAGTTCATTATTCATAACTTGAGGCAGTAATTACAGTGGAATGAGTACTGGACAAGGAGTCAAAAAACTTGATTT CAGGTCCTAGCTCTAGCACTTACAGCTGTGTGATCTTGGGCAAGTCACTTAACCTCTCTTTGCCTCAATTTCCTCATCTTGAAATGAGGA TAATAATACCTGCTGTACCTACCTCACAGGGCTGTTGTGAGGATTAAATGAGATGGCATGTGAAAGCACTTTGAAAATTGTAAAGCGCTA TGTAAATGTAAGGTATTATAGAAACATCTTTAACATATAGTTTCATACCATTCATTTTTTAACAAAGAAAGGGAAAAGTCTGCTTGTAAG CTGGTTGAAAAAGTTAATCTTGATATAAATTTGTGTTTGATAAATATCCTCTCAGTGTTTTATCTTCCATGTTTCAACAACTATTGAAAT ATGAAATGCCTGTGAACTCTTAAAGCTTCATGAGCAGCTGCTTGAGTTCAGGAAGTTCACTGTTAGAAATAGGCTTTGTTAGCTGACTAG GGTCAGGGAAACTTTTCTCTTCAAATTTGAAAGCTGTTTCTGTTTTCATTTTACATTATTATTCAGAAATGGTAGCTATTCTATACCTAT GGTTTAAGTAAATATTTCTGAATAAGGCTTCACCATACTGTAAGCATTTTAGGTAGATTGCCTTAAAGGTTATGGGAGGGCATGAGGGAA CACTTCTTATGAGAAAACATTTATAAACAAAAGAAACATTTATAAACTAAAGAAAAACTAAAAGAATGACAGAACAATCATCTTAGCACC CTTTCCTCACAATAATATAAAAATATTAAAAGAACATAGGCAGGCTTTTTTTAAATTTGGCTTTTTTCTTTCCTTTTTTCAAATTGACTT TTATAGGTATTTCCTGAAAGTGTATACAAATTATTTCCTCGCCCAAAATAAAGCACCACTTCAAGGTGTGGTTTGACATTACATGCTAAT GAACAAACCCAGTATGCAAGTTATTCTTGCACCACATGCTCAAATCTTCTTGAGGTGCATTAACTCTTTTAGGTAACTAGAGCAGTACTT GGTGAACTAGATCAGGAGGTCAGTAAACTTTCTGTGGAAGGGCCAGAGAGTAAATATTTTAGGCTTTGCAGCCCATACGGTCTCTGTCAC AGCTAGTCAACCCTGCCATTTTACCACAAAAGCAGCAATAGACATTATGTAAACAAATGAGCACAGTTATGTTCCAATAAAACTTTATTT ACAAAAACAGATGACATCCCAGATGCAGACCATGGGCAACCAACCATTGCACTGGCCAAATCATTATTTATGGAGAAATCCTCTTTGTGT CTCTACTCTAGATGCCTAAAAGAGTTTATATACTTCTAAAAGCTCCTAACTTATATCCAAAGAATTGCTTTCTGATTCGTGTAGTCTCTC CCACAGATTCATAAACTTTTATGACTTATATTGTTTCCAGGTGGGCATGGTTTATTTCCCAGTTTAACAGTTCAGAATAGGGGCATTTAT TTTATCATATTTTAGGGTGGGTTAGGAGTATCCTTTCTGGAGACTGAGAAAGGGGTGTATTTAATTCCATCAGGTCCAGTACAGTACTAG GAGTCATAATACTTTATAATCAATTAAATAAATAGAACCACTGAGACAATAATGTATTTTTTTAAAGTGGCAAATGTGGTTTTCTTTTTT CAGCCTTTGCGCTTTTTCAGTATTTTGACCATAGGGAGATAATTTTTTTATAATACAAAAGTAACCACTTGGAATTTTAAAGATAATGTT ATGTGTGTATGTGAAATATATATACATATATATATATATGTTTATTTCCTAAAAGAAGAAAAGATACCTTTCTGTTCAACTTGTATCAAC TCCTCTTTTCTAATTGCTGTGAAATGGCAACTGTTGATAAATTATTGTGATTGTTTTAAAATCTAATGGGAAGTAAAATATATTTTGATT TTACCCAGCTTAATCTGTAAAGTAGCACTTAAATATATCTGATAGCAACACTTAAGATATTGCATGGGGATTACTTTCCTATCATCCATA TGCATTTGTGCAACTTCAAACATATTGGGTGCTTCTGAATTCCTGATGATTGGATTTAAGCTATTGAAAATTGGATAATTTAAACTTAAT GATTTTTATAATTTTCTGATCTTAAAATTTGGTTAATGCCTATAATCTGTTGCTTTTTCTCAATATGTGTCCTATTGGAAATTCCTCAAA TCGTTGGTGCCATCAGTGATTTACAAACAATATTTTGATATTGCAGATGACTTGCTTACTGTATTTGCATTGTTAGAAAACAGTTTGTAG ACAATGATTCTTTTTTAATAAAATCAAATAATTCTAAAAGTGCTAGAGAATTTAACTAAAAGCTGGTTCCCAAATGCATAGCTGGCATTT TAATTTAAATTCAAATCTACATAGAGAACATCTGTGTAAATCATCTAACTGGATTTTTCCATTGGTCATTCCCAAACACACCTATGGTCC TAGAATCCTTAAGAGAAGCACCCTGTAACCTTTTATGTGGTTTGCCTTTAAGAGGCCCAGGTGCTTCTCCTTTATGATTTGAGTTGGCCT CTTCATAAATTAGTGCTGTTTACTTTCAGAGGAAGCAGAGAAGTTGCTGTTATGTTTTTGCATCCGTTTACCCTATGCAAAGTTGCTGTA TGATGCCAACTAAACTACTCTTTAGGCAGCCTTCTGAGGAGAAAAGCAACCCTGTTTCAAATCCACTGCCAATTCAGCTCCTCTGGAGTG GAGCTTTCTGATTTCTTGGAGCAGGAATTTTAGAGATTGAAATGAATGATCATTTAGTCAGATTTATCCTGTAATTTCATGCAGCTTTGT GGCCTTTGCAGTACTATTTATAAAATGGACCCTGATGGTGATGAACTCTTTAGAACGCATTACTGTTAAGCCTGTGTTGAGACATTGATG CTGTCTATCTCATTTTTTAGACAGTTTTTGTAGCTTTCTATTGAGAGTCAGGTATGTGAGCATCTCTGAAGCAGTGTTGAATGTAATTTT CGGAAACATGGATTGTGTATTTTGACTTTTATTTTATAAATACACAGCTCAACAGTGCCTTTTTTTTCCCTCATAGTCCTGTTGGAAGAT GCTCACTACTTTCTCTCTTCTCTCTCCCTGCCCTCCCCCACTCCATTCAGTTGATTCATTTATGCAAATTCTGTTTCCAACTTGAAACCA TTTTGTCACATCTGTTGGAGAGATAATCACTCCTTTTCCTTAACATTCTGCCAGCTTTCTGATGTTGAAGTGTTTCAGTTGACTACCTGA TGCAAAAGCTATAAAATAAACAGTGGGAAGGGGAAAAATTGGTGTCCTGTTTTAATATTTTCTTTTGTAGCCTTGACACTGATGGACATT TTCCAAGCTGACTCAGTGTTCAGTGTCAACTTAACTCTCAGATAGTGTTGCCATCAAGAAAGCATGCAACATCATTGGTTTCTAATGATT TTATGGCTTGTGACAATATTTTATCTGGACTGACATGCCTCTGCTGCTTTTGCTTTGTACTTCATTGCTGGTAATAAAATTTCAGATGGA AAACTTACAAAATATATACTTAATTAGAAGAAAAAAATAGAGAAAGGGCTATTAGAATTAAAAAAATTTGAAAGTAACTTAATCTAACAT TTATGGCACAGTTTGGACATATCCATAATTTTTTTTGGGAACACACATTTCTGATTTTTTTTTTCCCCCTTAAAGAAGAAAGTCTCAATT CCATTGATTTTCAATTCTTAGCCACTGGCTCATTGCTTTGAGCAATGCTTGATTGATTCTATTTATATTATATGATATTGGGTTGATAAA ATACCAGTTCAATGATGAGTTTTCTTAACAGAATTTGGTTTGTACTTGCAGTGGCTGAACAAAGAGCATGGCTTGAGAATCAAAGGGATC TGCATTTAGCAATGTGATGTCAGTAAATGGACATAACAGGATTGTTGTAAAGGTTGGGCATGATGTATGCAAAGTACTGGCCAGGGTAGA CTAATAACTGATGGCATTTATATGCTGTGCTGGAATATTGTTACCAAGCTGATGTGCCGTTCTCACCCTGCAGAATACTGGTTTTGTCAT >In-frame_ENST00000423018_ENST00000370550_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=298AA_start in transcript=502_stop in transcript=1398 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF AKFGVKKKPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTFDECVAEGGSDCAPEKLWLQIPFFCGHSSECWNVGSRWAMD QAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATELYRTGKKSHLRKTTEKKLPTKQTIAKLQQSDIWKMENEFYEFALEQFQFIR -------------------------------------------------------------- >In-frame_ENST00000423018_ENST00000356813_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(transcript)=3964nt_BP=452nt GAAAGGTAAGGGGGAGCGAGAGCGCCAGAGAGAGAAGATCGGGGGGCTGAAATCCATCTTCATCCTACCGCTCCGCCCGTGTTGGTGGAA TGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGCTA ATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGACTC ACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTG AGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACATC AGAAAGGGCTATTGCAAGACACGAAGTCCGAGAAATTGAGCAGCGACATACAATGGATGGCCCTCGGCAAGATGCCACTTTAGATGAGGA AGAGGACATGGTGATCATTTATAACAGAGTTCCCAAAACGGCAAGCACTTCATTTACCAATATCGCCTATGACCTGTGTGCAAAGAATAA ATACCATGTCCTTCATATCAACACTACCAAAAATAATCCAGTGATGTCATTGCAAGATCAGGTGCGCTTTGTAAAGAATATAACTTCCTG GAAAGAGATGAAACCAGGATTTTATCATGGACACGTTTCTTACTTGGATTTTGCAAAATTTGGTGTGAAGAAGAAACCAATTTACATTAA TGTCATAAGGGATCCTATTGAGAGGCTAGTTTCTTATTATTACTTTCTGAGATTTGGAGATGATTATAGACCAGGGTTACGGAGACGAAA ACAAGGAGACAAAAAGACCTTTGATGAATGTGTAGCAGAAGGTGGCTCAGACTGTGCTCCAGAGAAGCTCTGGCTTCAAATCCCGTTCTT CTGTGGCCATAGCTCCGAATGCTGGAATGTGGGAAGCAGGTGGGCTATGGATCAAGCCAAGTATAACCTAATTAATGAATATTTTCTGGT GGGAGTTACTGAAGAACTTGAAGATTTTATCATGTTATTGGAGGCAGCATTGCCCCGGTTTTTCAGGGGTGCTACTGAACTCTATCGCAC AGCACCAGATACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCCATCTCATCGCTTTTGGTGAAAGTCAGTCCAGT TTGTAAAGATTCTCATTGTCACTGTAGACGAGGAACTGGGACACCAAAAGGAGAAACTCTGGCCACGCTTGCACCCTGTTCCCAATCCTG GTCCAGTGTCACCCACAGATGGTAAGGAGCTCTAGAGACCTCACCAGCCCCTGGGATTGGTCACCTCACTCTTCTATGGACAGAGATTCC TGCTGGGATCCTTTGAGGGCAAGCAGACCCTTCTTCCAGCTCGGACTGTGAACTCCACTGCAGCCGTAAGGACTGTCTGTGACAGTGAGC CCGAGATGACTGGGCTCTGTGCTCCCTCCCGGCCCTCCAATCCTTGGCCTGCCACAGAGAACTGAGCTCTTTTATTAGCACCATGAATGT GACTGATACAGCTAGCCATTCCCTTGTGCGAATGACTCAGTTTATTAATGCTCTGCTAAAGATGGCTTCTTTGCTTGCCAGCAGCCTTAA ACAGTATTTCATTAAAACTGGCTTAATTATTTTGAGAAGACGGCCCAATTAAAAGCTATACACTCCCTCTATGTGAGTGTTTATACATAG AGCTGTATATATAATACATATTTGTAAGTGTGTATATATATATGTGTGTATGTATGTGTCTATAAATATATAGGCTTAGCAATTTCATTA CATGGGATAAATTGTTGGAAAAAATACCCAGGAGCTGGTCCCCTTTCTGTTGCTAGATTCAGAGTAGAGGCCACCCCTCCACTCTGGGAG AGGCTGGTGTTGGTGATCTCTCAATGACTCTGCAATGGAAGTCCCAACTGCACAGAGCCCTGCCCCAGTTTCAGGAGCCAGCAGCCTCGG AGAGGCGGATCCTGACCTCTGCTCTGCTCTTGGGATAGCCTTTCCCTTCCCAGCAGGGTTGAGATACTTGGGCCGGGAAATGTTGTGGCA AAGTGTTTGCCAAAGCTCAGGAGAGACACAGACTTGGGGCTTTTGTTTCTTGAGCTGGCTGTCTAGCTTTCCTAATGAGCAAATATGTTC TCTTTAAGGAAACAAACAAACAAAGCAAAAACACCAATTCATCTGGATTTTATTCATTTGTTTTAAATACAAACAAACAAAAGGAGAGTG GTTATTTCTGCACCAACTATTTCAAATGCAAGTTACTCCATCGCTCGGGGTGGTTGGATGGTGCTTGTCACCATAGGACCCACAGGGCTA GTTCCAACTGTTATTCGGTAAGGCTTTTTTCTTTCCAAAATTCCCAGTGTTCCTTTAAGGCCCATTTAGCTGCGGGTTTTGTTTATTCTC CCGGCAATCAGCATTTAAAATAAGACAAACAAGCATTTTTTCCTGGGCTGTGAATCCCCCCGGCCAGCCTCCACCTGCACACCTGAAGCC AGCATGTCCAATCAAATTTCTCTGTAACCCATATCCCCTTTAGAGACTTGCCCCCGTCGTATACCAGGCTGGAAATAGAGAACTTAAGCA GGGCAAATGTAATTTTAAGAATTGCTAATGATGCTAGAAATCTGCAATGCAATTAGCGTCATTGGATTTGGCGCTCCTCCGAAGGCACAA AACTCCTTGTCATAGCGCAGTGGCAGCAGCGGCAAGTGCCTCCGCATGTGCCGGGCTGTCCGGGTATGCTGGCAGCCGCTTTGCACTGAG ATGTGAGCAGTTGGTTAGGCTTCCTCTCTTTCTTTCTCACAGATACTGACTTCTTTGTCTCTTTTCTGGGTTGCAGAGGGATGGGTATTT TCCATTGATTATTACTTTAGCATTTGACCCTCCAGTGGAGTCACCCTGTTTTTTTTTTAGAAAACTGAGACTCTCACTTTGTGAATTCAC TGTGCTCTCTGGGATTTCAGTGCTGTAGTTCAACCACCAATCCCCCTGTCCTGAACTCCAGTACTTCTGATGCTATTAATTGGTTCCTCA ACAATTGTGGCCTTTTCCATCATTGCCCACCATAGTATATACTTTTTCTTTCTCTCTCTTTTTTCTAATTTCCTTGTCTTCTTCACTCTC CATGGAGCCAGAGGTAGTATGAAGAGTTAAAAATAGGAATATAAAGAAAGCCAGAGGGACAGAGGGAGTGAGAAAGAAAAATTTTAAAAA GGGAGGAAATGAATTATTGGATTAAAAATAAACTTTTACTTTTTTGCAGAAAAATTATTTTTGCTCTCTGGGAAAATAACATGGGCCAGG CATAAAAAGCATGTCAGCTGGCTAAAAGATTGCAAAATCCAGAAGATGATCTCGATGTGTCTGTTCAATTTAGCAAGGGTATCTACTAGG GGATCCTCTTTTAAATATGGAGGCCCAAATCAGAAGCTTGTAGAGGGGAGCTATTCTTCCAAGATTCCAGATGTGTCTGTGAGACAACAC GTTATGGGGCAAATTGATTTCACCCTTGGGAAACCAGGGAGATTTTCAAAGTTATGTCTGCAAAGCCAGCTAATGCAATTCCCCATTAGT GCATTAAAGTGCGCCCTTATTAATTCAAACATAAAGGCAACAAAATAAGCTTTTAAATTTAAAATATAATACATATATAATGAGCATGTG TGAAAGCCTTATTCAAATGAAAATACAGGAGTGTTTGAACTACTGAGGTATCTTTTGTATTGAATTATGAGCATATGTAATAGATTTAAT TATTAATTTCCCCATTGTTCTATGCACACAGACAGGGTTCAAGGCACAGTCATTCTCTGGCTTTCATAGATCTAATTTGTATAATTATTG >In-frame_ENST00000423018_ENST00000356813_TCGA-EB-A82C-01A_PUM1_chr1_31532051_-_HS2ST1_chr1_87538617_length(amino acids)=290AA_start in transcript=502_stop in transcript=1374 MDGPRQDATLDEEEDMVIIYNRVPKTASTSFTNIAYDLCAKNKYHVLHINTTKNNPVMSLQDQVRFVKNITSWKEMKPGFYHGHVSYLDF AKFGVKKKPIYINVIRDPIERLVSYYYFLRFGDDYRPGLRRRKQGDKKTFDECVAEGGSDCAPEKLWLQIPFFCGHSSECWNVGSRWAMD QAKYNLINEYFLVGVTEELEDFIMLLEAALPRFFRGATELYRTAPDTATPSHRHGPICGSKSISSLLVKVSPVCKDSHCHCRRGTGTPKG -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for PUM1-HS2ST1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for PUM1-HS2ST1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for PUM1-HS2ST1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | PUM1 | C0004134 | Ataxia | 1 | GENOMICS_ENGLAND |
Hgene | PUM1 | C0010417 | Cryptorchidism | 1 | GENOMICS_ENGLAND |
Hgene | PUM1 | C0019193 | Hepatitis, Toxic | 1 | CTD_human |
Hgene | PUM1 | C0036572 | Seizures | 1 | GENOMICS_ENGLAND |
Hgene | PUM1 | C0557874 | Global developmental delay | 1 | GENOMICS_ENGLAND |
Hgene | PUM1 | C0860207 | Drug-Induced Liver Disease | 1 | CTD_human |
Hgene | PUM1 | C1262760 | Hepatitis, Drug-Induced | 1 | CTD_human |
Hgene | PUM1 | C3658290 | Drug-Induced Acute Liver Injury | 1 | CTD_human |
Hgene | PUM1 | C3714756 | Intellectual Disability | 1 | GENOMICS_ENGLAND |
Hgene | PUM1 | C4025871 | Abnormality of the face | 1 | GENOMICS_ENGLAND |
Hgene | PUM1 | C4277682 | Chemical and Drug Induced Liver Injury | 1 | CTD_human |
Hgene | PUM1 | C4279912 | Chemically-Induced Liver Toxicity | 1 | CTD_human |
Hgene | PUM1 | C4693672 | SPINOCEREBELLAR ATAXIA 47 | 1 | GENOMICS_ENGLAND;UNIPROT |