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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Diseases

Fusion gene:PUM1-LAPTM5 (FusionGDB2 ID:70230)

Fusion Gene Summary for PUM1-LAPTM5

check button Fusion gene summary
Fusion gene informationFusion gene name: PUM1-LAPTM5
Fusion gene ID: 70230
HgeneTgene
Gene symbol

PUM1

LAPTM5

Gene ID

9698

7805

Gene namepumilio RNA binding family member 1lysosomal protein transmembrane 5
SynonymsHSPUM|PUMH|PUMH1|PUML1|SCA47CLAST6
Cytomap

1p35.2

1p35.2

Type of geneprotein-codingprotein-coding
Descriptionpumilio homolog 1pumilio-1lysosomal-associated transmembrane protein 5CD40-ligand-activated specific transcriptshuman retinoic acid-inducible E3 proteinlysosomal associated multispanning membrane protein 5lysosomal multispanning membrane protein 5lysosomal-associated multitra
Modification date2020031320200313
UniProtAcc.

Q13571

Ensembl transtripts involved in fusion geneENST00000424085, ENST00000257075, 
ENST00000373747, ENST00000426105, 
ENST00000440538, ENST00000373741, 
ENST00000423018, ENST00000373742, 
ENST00000490546, 		ENST00000294507, 
ENST00000476492, 
Fusion gene scores* DoF score38 X 31 X 15=176707 X 4 X 5=140
# samples 5610
** MAII scorelog2(56/17670*10)=-4.97973140249401
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(10/140*10)=-0.485426827170242
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: PUM1 [Title/Abstract] AND LAPTM5 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointPUM1(31501643)-LAPTM5(31215396), # samples:3
Anticipated loss of major functional domain due to fusion event.PUM1-LAPTM5 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgenePUM1

GO:0010608

posttranscriptional regulation of gene expression

25100735

HgenePUM1

GO:0043488

regulation of mRNA stability

26724866

HgenePUM1

GO:0051726

regulation of cell cycle

20818387

HgenePUM1

GO:0051983

regulation of chromosome segregation

26724866

HgenePUM1

GO:1900246

positive regulation of RIG-I signaling pathway

25340845

HgenePUM1

GO:2000637

positive regulation of gene silencing by miRNA

20818387|22345517


check buttonFusion gene breakpoints across PUM1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across LAPTM5 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4BLCATCGA-CU-A0YN-01APUM1chr1

31501643

-LAPTM5chr1

31215396

-
ChimerDB4OVTCGA-13-1488-01APUM1chr1

31532051

-LAPTM5chr1

31215396

-
ChimerDB4STADTCGA-CD-A48CPUM1chr1

31501642

-LAPTM5chr1

31215396

-
ChimerDB4STADTCGA-CD-A48CPUM1chr1

31501642

-LAPTM5chr1

31212784

-
ChimerDB4BLCATCGA-CU-A0YN-01APUM1chr1

31501643

-LAPTM5chr1

31215396

-
ChimerDB4OVTCGA-13-1488-01APUM1chr1

31532051

-LAPTM5chr1

31215396

-
ChimerDB4OVTCGA-13-1488-01APUM1chr1

31532146

-LAPTM5chr1

31215396

-
ChimerDB4OVTCGA-13-1488-01APUM1chr1

31528160

-LAPTM5chr1

31215396

-
ChimerDB4STADTCGA-CD-A48C-01APUM1chr1

31501643

-LAPTM5chr1

31215396

-


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Fusion Gene ORF analysis for PUM1-LAPTM5

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
Frame-shiftENST00000424085ENST00000294507PUM1chr1

31501643

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000424085ENST00000476492PUM1chr1

31501643

-LAPTM5chr1

31215396

-
Frame-shiftENST00000257075ENST00000294507PUM1chr1

31501643

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000257075ENST00000476492PUM1chr1

31501643

-LAPTM5chr1

31215396

-
Frame-shiftENST00000373747ENST00000294507PUM1chr1

31501643

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000373747ENST00000476492PUM1chr1

31501643

-LAPTM5chr1

31215396

-
Frame-shiftENST00000426105ENST00000294507PUM1chr1

31501643

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000426105ENST00000476492PUM1chr1

31501643

-LAPTM5chr1

31215396

-
Frame-shiftENST00000440538ENST00000294507PUM1chr1

31501643

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000440538ENST00000476492PUM1chr1

31501643

-LAPTM5chr1

31215396

-
In-frameENST00000373741ENST00000294507PUM1chr1

31501643

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000373741ENST00000476492PUM1chr1

31501643

-LAPTM5chr1

31215396

-
Frame-shiftENST00000423018ENST00000294507PUM1chr1

31501643

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000423018ENST00000476492PUM1chr1

31501643

-LAPTM5chr1

31215396

-
In-frameENST00000373742ENST00000294507PUM1chr1

31501643

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000373742ENST00000476492PUM1chr1

31501643

-LAPTM5chr1

31215396

-
intron-3CDSENST00000490546ENST00000294507PUM1chr1

31501643

-LAPTM5chr1

31215396

-
intron-5UTRENST00000490546ENST00000476492PUM1chr1

31501643

-LAPTM5chr1

31215396

-
Frame-shiftENST00000424085ENST00000294507PUM1chr1

31532051

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000424085ENST00000476492PUM1chr1

31532051

-LAPTM5chr1

31215396

-
Frame-shiftENST00000257075ENST00000294507PUM1chr1

31532051

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000257075ENST00000476492PUM1chr1

31532051

-LAPTM5chr1

31215396

-
Frame-shiftENST00000373747ENST00000294507PUM1chr1

31532051

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000373747ENST00000476492PUM1chr1

31532051

-LAPTM5chr1

31215396

-
Frame-shiftENST00000426105ENST00000294507PUM1chr1

31532051

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000426105ENST00000476492PUM1chr1

31532051

-LAPTM5chr1

31215396

-
Frame-shiftENST00000440538ENST00000294507PUM1chr1

31532051

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000440538ENST00000476492PUM1chr1

31532051

-LAPTM5chr1

31215396

-
In-frameENST00000373741ENST00000294507PUM1chr1

31532051

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000373741ENST00000476492PUM1chr1

31532051

-LAPTM5chr1

31215396

-
Frame-shiftENST00000423018ENST00000294507PUM1chr1

31532051

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000423018ENST00000476492PUM1chr1

31532051

-LAPTM5chr1

31215396

-
In-frameENST00000373742ENST00000294507PUM1chr1

31532051

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000373742ENST00000476492PUM1chr1

31532051

-LAPTM5chr1

31215396

-
intron-3CDSENST00000490546ENST00000294507PUM1chr1

31532051

-LAPTM5chr1

31215396

-
intron-5UTRENST00000490546ENST00000476492PUM1chr1

31532051

-LAPTM5chr1

31215396

-
Frame-shiftENST00000424085ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000424085ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31215396

-
Frame-shiftENST00000257075ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000257075ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31215396

-
Frame-shiftENST00000373747ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000373747ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31215396

-
Frame-shiftENST00000426105ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000426105ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31215396

-
Frame-shiftENST00000440538ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000440538ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31215396

-
In-frameENST00000373741ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000373741ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31215396

-
Frame-shiftENST00000423018ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000423018ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31215396

-
In-frameENST00000373742ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31215396

-
5CDS-5UTRENST00000373742ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31215396

-
intron-3CDSENST00000490546ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31215396

-
intron-5UTRENST00000490546ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31215396

-
Frame-shiftENST00000424085ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31212784

-
5CDS-intronENST00000424085ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31212784

-
Frame-shiftENST00000257075ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31212784

-
5CDS-intronENST00000257075ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31212784

-
Frame-shiftENST00000373747ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31212784

-
5CDS-intronENST00000373747ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31212784

-
Frame-shiftENST00000426105ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31212784

-
5CDS-intronENST00000426105ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31212784

-
Frame-shiftENST00000440538ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31212784

-
5CDS-intronENST00000440538ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31212784

-
In-frameENST00000373741ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31212784

-
5CDS-intronENST00000373741ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31212784

-
Frame-shiftENST00000423018ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31212784

-
5CDS-intronENST00000423018ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31212784

-
In-frameENST00000373742ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31212784

-
5CDS-intronENST00000373742ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31212784

-
intron-3CDSENST00000490546ENST00000294507PUM1chr1

31501642

-LAPTM5chr1

31212784

-
intron-intronENST00000490546ENST00000476492PUM1chr1

31501642

-LAPTM5chr1

31212784

-
intron-3CDSENST00000424085ENST00000294507PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-5UTRENST00000424085ENST00000476492PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-3CDSENST00000257075ENST00000294507PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-5UTRENST00000257075ENST00000476492PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-3CDSENST00000373747ENST00000294507PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-5UTRENST00000373747ENST00000476492PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-3CDSENST00000426105ENST00000294507PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-5UTRENST00000426105ENST00000476492PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-3CDSENST00000440538ENST00000294507PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-5UTRENST00000440538ENST00000476492PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-3CDSENST00000373741ENST00000294507PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-5UTRENST00000373741ENST00000476492PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-3CDSENST00000423018ENST00000294507PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-5UTRENST00000423018ENST00000476492PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-3CDSENST00000373742ENST00000294507PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-5UTRENST00000373742ENST00000476492PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-3CDSENST00000490546ENST00000294507PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-5UTRENST00000490546ENST00000476492PUM1chr1

31532146

-LAPTM5chr1

31215396

-
intron-3CDSENST00000424085ENST00000294507PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-5UTRENST00000424085ENST00000476492PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-3CDSENST00000257075ENST00000294507PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-5UTRENST00000257075ENST00000476492PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-3CDSENST00000373747ENST00000294507PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-5UTRENST00000373747ENST00000476492PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-3CDSENST00000426105ENST00000294507PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-5UTRENST00000426105ENST00000476492PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-3CDSENST00000440538ENST00000294507PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-5UTRENST00000440538ENST00000476492PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-3CDSENST00000373741ENST00000294507PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-5UTRENST00000373741ENST00000476492PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-3CDSENST00000423018ENST00000294507PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-5UTRENST00000423018ENST00000476492PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-3CDSENST00000373742ENST00000294507PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-5UTRENST00000373742ENST00000476492PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-3CDSENST00000490546ENST00000294507PUM1chr1

31528160

-LAPTM5chr1

31215396

-
intron-5UTRENST00000490546ENST00000476492PUM1chr1

31528160

-LAPTM5chr1

31215396

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000373741PUM1chr131501643-ENST00000294507LAPTM5chr131215396-28077461131447444
ENST00000373742PUM1chr131501643-ENST00000294507LAPTM5chr131215396-260154001241413
ENST00000373741PUM1chr131532051-ENST00000294507LAPTM5chr131215396-27386771131378421
ENST00000373742PUM1chr131532051-ENST00000294507LAPTM5chr131215396-253247101172390
ENST00000373741PUM1chr131501642-ENST00000294507LAPTM5chr131215396-28077461131447444
ENST00000373742PUM1chr131501642-ENST00000294507LAPTM5chr131215396-260154001241413
ENST00000373741PUM1chr131501642-ENST00000294507LAPTM5chr131212784-263674611832394
ENST00000373742PUM1chr131501642-ENST00000294507LAPTM5chr131212784-243054001070356

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000373741ENST00000294507PUM1chr131501643-LAPTM5chr131215396-0.010323850.9896762
ENST00000373742ENST00000294507PUM1chr131501643-LAPTM5chr131215396-0.0086500010.99134994
ENST00000373741ENST00000294507PUM1chr131532051-LAPTM5chr131215396-0.0205290820.9794709
ENST00000373742ENST00000294507PUM1chr131532051-LAPTM5chr131215396-0.0180301890.98196983
ENST00000373741ENST00000294507PUM1chr131501642-LAPTM5chr131215396-0.010323850.9896762
ENST00000373742ENST00000294507PUM1chr131501642-LAPTM5chr131215396-0.0086500010.99134994
ENST00000373741ENST00000294507PUM1chr131501642-LAPTM5chr131212784-0.0057295950.99427044
ENST00000373742ENST00000294507PUM1chr131501642-LAPTM5chr131212784-0.0044819150.99551815

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Fusion Genomic Features for PUM1-LAPTM5


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for PUM1-LAPTM5


check button Go to

FGviewer for the breakpoints of chr1:31501643-chr1:31215396

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.LAPTM5

Q13571

FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: May have a special functional role during embryogenesis and in adult hematopoietic cells. {ECO:0000269|PubMed:8661146}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneLAPTM5chr1:31501642chr1:31212784ENST0000029450728246_25886.0263.0Compositional biasNote=Pro-rich
TgeneLAPTM5chr1:31501642chr1:31215396ENST0000029450708246_25829.0263.0Compositional biasNote=Pro-rich
TgeneLAPTM5chr1:31501643chr1:31215396ENST0000029450708246_25829.0263.0Compositional biasNote=Pro-rich
TgeneLAPTM5chr1:31532051chr1:31215396ENST0000029450708246_25829.0263.0Compositional biasNote=Pro-rich
TgeneLAPTM5chr1:31501642chr1:31212784ENST0000029450728134_15486.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31501642chr1:31212784ENST0000029450728184_20486.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31501642chr1:31212784ENST000002945072892_11286.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31501642chr1:31215396ENST0000029450708134_15429.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31501642chr1:31215396ENST0000029450708184_20429.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31501642chr1:31215396ENST000002945070864_8429.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31501642chr1:31215396ENST000002945070892_11229.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31501643chr1:31215396ENST0000029450708134_15429.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31501643chr1:31215396ENST0000029450708184_20429.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31501643chr1:31215396ENST000002945070864_8429.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31501643chr1:31215396ENST000002945070892_11229.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31532051chr1:31215396ENST0000029450708134_15429.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31532051chr1:31215396ENST0000029450708184_20429.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31532051chr1:31215396ENST000002945070864_8429.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31532051chr1:31215396ENST000002945070892_11229.0263.0TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgenePUM1chr1:31501642chr1:31212784ENST00000257075-322393_613144.01187.0Compositional biasNote=Ala-rich
HgenePUM1chr1:31501642chr1:31212784ENST00000257075-322475_523144.01187.0Compositional biasNote=Gln-rich
HgenePUM1chr1:31501642chr1:31212784ENST00000257075-322642_815144.01187.0Compositional biasNote=Ser-rich
HgenePUM1chr1:31501642chr1:31212784ENST00000426105-322393_613144.01189.0Compositional biasNote=Ala-rich
HgenePUM1chr1:31501642chr1:31212784ENST00000426105-322475_523144.01189.0Compositional biasNote=Gln-rich
HgenePUM1chr1:31501642chr1:31212784ENST00000426105-322642_815144.01189.0Compositional biasNote=Ser-rich
HgenePUM1chr1:31501642chr1:31212784ENST00000440538-322393_613144.01163.0Compositional biasNote=Ala-rich
HgenePUM1chr1:31501642chr1:31212784ENST00000440538-322475_523144.01163.0Compositional biasNote=Gln-rich
HgenePUM1chr1:31501642chr1:31212784ENST00000440538-322642_815144.01163.0Compositional biasNote=Ser-rich
HgenePUM1chr1:31501642chr1:31215396ENST00000257075-322393_613144.01187.0Compositional biasNote=Ala-rich
HgenePUM1chr1:31501642chr1:31215396ENST00000257075-322475_523144.01187.0Compositional biasNote=Gln-rich
HgenePUM1chr1:31501642chr1:31215396ENST00000257075-322642_815144.01187.0Compositional biasNote=Ser-rich
HgenePUM1chr1:31501642chr1:31215396ENST00000426105-322393_613144.01189.0Compositional biasNote=Ala-rich
HgenePUM1chr1:31501642chr1:31215396ENST00000426105-322475_523144.01189.0Compositional biasNote=Gln-rich
HgenePUM1chr1:31501642chr1:31215396ENST00000426105-322642_815144.01189.0Compositional biasNote=Ser-rich
HgenePUM1chr1:31501642chr1:31215396ENST00000440538-322393_613144.01163.0Compositional biasNote=Ala-rich
HgenePUM1chr1:31501642chr1:31215396ENST00000440538-322475_523144.01163.0Compositional biasNote=Gln-rich
HgenePUM1chr1:31501642chr1:31215396ENST00000440538-322642_815144.01163.0Compositional biasNote=Ser-rich
HgenePUM1chr1:31501643chr1:31215396ENST00000257075-322393_613144.01187.0Compositional biasNote=Ala-rich
HgenePUM1chr1:31501643chr1:31215396ENST00000257075-322475_523144.01187.0Compositional biasNote=Gln-rich
HgenePUM1chr1:31501643chr1:31215396ENST00000257075-322642_815144.01187.0Compositional biasNote=Ser-rich
HgenePUM1chr1:31501643chr1:31215396ENST00000426105-322393_613144.01189.0Compositional biasNote=Ala-rich
HgenePUM1chr1:31501643chr1:31215396ENST00000426105-322475_523144.01189.0Compositional biasNote=Gln-rich
HgenePUM1chr1:31501643chr1:31215396ENST00000426105-322642_815144.01189.0Compositional biasNote=Ser-rich
HgenePUM1chr1:31501643chr1:31215396ENST00000440538-322393_613144.01163.0Compositional biasNote=Ala-rich
HgenePUM1chr1:31501643chr1:31215396ENST00000440538-322475_523144.01163.0Compositional biasNote=Gln-rich
HgenePUM1chr1:31501643chr1:31215396ENST00000440538-322642_815144.01163.0Compositional biasNote=Ser-rich
HgenePUM1chr1:31532051chr1:31215396ENST00000257075-222393_613121.01187.0Compositional biasNote=Ala-rich
HgenePUM1chr1:31532051chr1:31215396ENST00000257075-222475_523121.01187.0Compositional biasNote=Gln-rich
HgenePUM1chr1:31532051chr1:31215396ENST00000257075-222642_815121.01187.0Compositional biasNote=Ser-rich
HgenePUM1chr1:31532051chr1:31215396ENST00000426105-222393_613121.01189.0Compositional biasNote=Ala-rich
HgenePUM1chr1:31532051chr1:31215396ENST00000426105-222475_523121.01189.0Compositional biasNote=Gln-rich
HgenePUM1chr1:31532051chr1:31215396ENST00000426105-222642_815121.01189.0Compositional biasNote=Ser-rich
HgenePUM1chr1:31532051chr1:31215396ENST00000440538-222393_613121.01163.0Compositional biasNote=Ala-rich
HgenePUM1chr1:31532051chr1:31215396ENST00000440538-222475_523121.01163.0Compositional biasNote=Gln-rich
HgenePUM1chr1:31532051chr1:31215396ENST00000440538-222642_815121.01163.0Compositional biasNote=Ser-rich
HgenePUM1chr1:31501642chr1:31212784ENST00000257075-322828_1168144.01187.0DomainPUM-HD
HgenePUM1chr1:31501642chr1:31212784ENST00000426105-322828_1168144.01189.0DomainPUM-HD
HgenePUM1chr1:31501642chr1:31212784ENST00000440538-322828_1168144.01163.0DomainPUM-HD
HgenePUM1chr1:31501642chr1:31215396ENST00000257075-322828_1168144.01187.0DomainPUM-HD
HgenePUM1chr1:31501642chr1:31215396ENST00000426105-322828_1168144.01189.0DomainPUM-HD
HgenePUM1chr1:31501642chr1:31215396ENST00000440538-322828_1168144.01163.0DomainPUM-HD
HgenePUM1chr1:31501643chr1:31215396ENST00000257075-322828_1168144.01187.0DomainPUM-HD
HgenePUM1chr1:31501643chr1:31215396ENST00000426105-322828_1168144.01189.0DomainPUM-HD
HgenePUM1chr1:31501643chr1:31215396ENST00000440538-322828_1168144.01163.0DomainPUM-HD
HgenePUM1chr1:31532051chr1:31215396ENST00000257075-222828_1168121.01187.0DomainPUM-HD
HgenePUM1chr1:31532051chr1:31215396ENST00000426105-222828_1168121.01189.0DomainPUM-HD
HgenePUM1chr1:31532051chr1:31215396ENST00000440538-222828_1168121.01163.0DomainPUM-HD
HgenePUM1chr1:31501642chr1:31212784ENST00000257075-3221028_1063144.01187.0RepeatPumilio 6
HgenePUM1chr1:31501642chr1:31212784ENST00000257075-3221064_1099144.01187.0RepeatPumilio 7
HgenePUM1chr1:31501642chr1:31212784ENST00000257075-3221103_1142144.01187.0RepeatPumilio 8
HgenePUM1chr1:31501642chr1:31212784ENST00000257075-322848_883144.01187.0RepeatPumilio 1
HgenePUM1chr1:31501642chr1:31212784ENST00000257075-322884_919144.01187.0RepeatPumilio 2
HgenePUM1chr1:31501642chr1:31212784ENST00000257075-322920_955144.01187.0RepeatPumilio 3
HgenePUM1chr1:31501642chr1:31212784ENST00000257075-322956_991144.01187.0RepeatPumilio 4
HgenePUM1chr1:31501642chr1:31212784ENST00000257075-322992_1027144.01187.0RepeatPumilio 5
HgenePUM1chr1:31501642chr1:31212784ENST00000426105-3221028_1063144.01189.0RepeatPumilio 6
HgenePUM1chr1:31501642chr1:31212784ENST00000426105-3221064_1099144.01189.0RepeatPumilio 7
HgenePUM1chr1:31501642chr1:31212784ENST00000426105-3221103_1142144.01189.0RepeatPumilio 8
HgenePUM1chr1:31501642chr1:31212784ENST00000426105-322848_883144.01189.0RepeatPumilio 1
HgenePUM1chr1:31501642chr1:31212784ENST00000426105-322884_919144.01189.0RepeatPumilio 2
HgenePUM1chr1:31501642chr1:31212784ENST00000426105-322920_955144.01189.0RepeatPumilio 3
HgenePUM1chr1:31501642chr1:31212784ENST00000426105-322956_991144.01189.0RepeatPumilio 4
HgenePUM1chr1:31501642chr1:31212784ENST00000426105-322992_1027144.01189.0RepeatPumilio 5
HgenePUM1chr1:31501642chr1:31212784ENST00000440538-3221028_1063144.01163.0RepeatPumilio 6
HgenePUM1chr1:31501642chr1:31212784ENST00000440538-3221064_1099144.01163.0RepeatPumilio 7
HgenePUM1chr1:31501642chr1:31212784ENST00000440538-3221103_1142144.01163.0RepeatPumilio 8
HgenePUM1chr1:31501642chr1:31212784ENST00000440538-322848_883144.01163.0RepeatPumilio 1
HgenePUM1chr1:31501642chr1:31212784ENST00000440538-322884_919144.01163.0RepeatPumilio 2
HgenePUM1chr1:31501642chr1:31212784ENST00000440538-322920_955144.01163.0RepeatPumilio 3
HgenePUM1chr1:31501642chr1:31212784ENST00000440538-322956_991144.01163.0RepeatPumilio 4
HgenePUM1chr1:31501642chr1:31212784ENST00000440538-322992_1027144.01163.0RepeatPumilio 5
HgenePUM1chr1:31501642chr1:31215396ENST00000257075-3221028_1063144.01187.0RepeatPumilio 6
HgenePUM1chr1:31501642chr1:31215396ENST00000257075-3221064_1099144.01187.0RepeatPumilio 7
HgenePUM1chr1:31501642chr1:31215396ENST00000257075-3221103_1142144.01187.0RepeatPumilio 8
HgenePUM1chr1:31501642chr1:31215396ENST00000257075-322848_883144.01187.0RepeatPumilio 1
HgenePUM1chr1:31501642chr1:31215396ENST00000257075-322884_919144.01187.0RepeatPumilio 2
HgenePUM1chr1:31501642chr1:31215396ENST00000257075-322920_955144.01187.0RepeatPumilio 3
HgenePUM1chr1:31501642chr1:31215396ENST00000257075-322956_991144.01187.0RepeatPumilio 4
HgenePUM1chr1:31501642chr1:31215396ENST00000257075-322992_1027144.01187.0RepeatPumilio 5
HgenePUM1chr1:31501642chr1:31215396ENST00000426105-3221028_1063144.01189.0RepeatPumilio 6
HgenePUM1chr1:31501642chr1:31215396ENST00000426105-3221064_1099144.01189.0RepeatPumilio 7
HgenePUM1chr1:31501642chr1:31215396ENST00000426105-3221103_1142144.01189.0RepeatPumilio 8
HgenePUM1chr1:31501642chr1:31215396ENST00000426105-322848_883144.01189.0RepeatPumilio 1
HgenePUM1chr1:31501642chr1:31215396ENST00000426105-322884_919144.01189.0RepeatPumilio 2
HgenePUM1chr1:31501642chr1:31215396ENST00000426105-322920_955144.01189.0RepeatPumilio 3
HgenePUM1chr1:31501642chr1:31215396ENST00000426105-322956_991144.01189.0RepeatPumilio 4
HgenePUM1chr1:31501642chr1:31215396ENST00000426105-322992_1027144.01189.0RepeatPumilio 5
HgenePUM1chr1:31501642chr1:31215396ENST00000440538-3221028_1063144.01163.0RepeatPumilio 6
HgenePUM1chr1:31501642chr1:31215396ENST00000440538-3221064_1099144.01163.0RepeatPumilio 7
HgenePUM1chr1:31501642chr1:31215396ENST00000440538-3221103_1142144.01163.0RepeatPumilio 8
HgenePUM1chr1:31501642chr1:31215396ENST00000440538-322848_883144.01163.0RepeatPumilio 1
HgenePUM1chr1:31501642chr1:31215396ENST00000440538-322884_919144.01163.0RepeatPumilio 2
HgenePUM1chr1:31501642chr1:31215396ENST00000440538-322920_955144.01163.0RepeatPumilio 3
HgenePUM1chr1:31501642chr1:31215396ENST00000440538-322956_991144.01163.0RepeatPumilio 4
HgenePUM1chr1:31501642chr1:31215396ENST00000440538-322992_1027144.01163.0RepeatPumilio 5
HgenePUM1chr1:31501643chr1:31215396ENST00000257075-3221028_1063144.01187.0RepeatPumilio 6
HgenePUM1chr1:31501643chr1:31215396ENST00000257075-3221064_1099144.01187.0RepeatPumilio 7
HgenePUM1chr1:31501643chr1:31215396ENST00000257075-3221103_1142144.01187.0RepeatPumilio 8
HgenePUM1chr1:31501643chr1:31215396ENST00000257075-322848_883144.01187.0RepeatPumilio 1
HgenePUM1chr1:31501643chr1:31215396ENST00000257075-322884_919144.01187.0RepeatPumilio 2
HgenePUM1chr1:31501643chr1:31215396ENST00000257075-322920_955144.01187.0RepeatPumilio 3
HgenePUM1chr1:31501643chr1:31215396ENST00000257075-322956_991144.01187.0RepeatPumilio 4
HgenePUM1chr1:31501643chr1:31215396ENST00000257075-322992_1027144.01187.0RepeatPumilio 5
HgenePUM1chr1:31501643chr1:31215396ENST00000426105-3221028_1063144.01189.0RepeatPumilio 6
HgenePUM1chr1:31501643chr1:31215396ENST00000426105-3221064_1099144.01189.0RepeatPumilio 7
HgenePUM1chr1:31501643chr1:31215396ENST00000426105-3221103_1142144.01189.0RepeatPumilio 8
HgenePUM1chr1:31501643chr1:31215396ENST00000426105-322848_883144.01189.0RepeatPumilio 1
HgenePUM1chr1:31501643chr1:31215396ENST00000426105-322884_919144.01189.0RepeatPumilio 2
HgenePUM1chr1:31501643chr1:31215396ENST00000426105-322920_955144.01189.0RepeatPumilio 3
HgenePUM1chr1:31501643chr1:31215396ENST00000426105-322956_991144.01189.0RepeatPumilio 4
HgenePUM1chr1:31501643chr1:31215396ENST00000426105-322992_1027144.01189.0RepeatPumilio 5
HgenePUM1chr1:31501643chr1:31215396ENST00000440538-3221028_1063144.01163.0RepeatPumilio 6
HgenePUM1chr1:31501643chr1:31215396ENST00000440538-3221064_1099144.01163.0RepeatPumilio 7
HgenePUM1chr1:31501643chr1:31215396ENST00000440538-3221103_1142144.01163.0RepeatPumilio 8
HgenePUM1chr1:31501643chr1:31215396ENST00000440538-322848_883144.01163.0RepeatPumilio 1
HgenePUM1chr1:31501643chr1:31215396ENST00000440538-322884_919144.01163.0RepeatPumilio 2
HgenePUM1chr1:31501643chr1:31215396ENST00000440538-322920_955144.01163.0RepeatPumilio 3
HgenePUM1chr1:31501643chr1:31215396ENST00000440538-322956_991144.01163.0RepeatPumilio 4
HgenePUM1chr1:31501643chr1:31215396ENST00000440538-322992_1027144.01163.0RepeatPumilio 5
HgenePUM1chr1:31532051chr1:31215396ENST00000257075-2221028_1063121.01187.0RepeatPumilio 6
HgenePUM1chr1:31532051chr1:31215396ENST00000257075-2221064_1099121.01187.0RepeatPumilio 7
HgenePUM1chr1:31532051chr1:31215396ENST00000257075-2221103_1142121.01187.0RepeatPumilio 8
HgenePUM1chr1:31532051chr1:31215396ENST00000257075-222848_883121.01187.0RepeatPumilio 1
HgenePUM1chr1:31532051chr1:31215396ENST00000257075-222884_919121.01187.0RepeatPumilio 2
HgenePUM1chr1:31532051chr1:31215396ENST00000257075-222920_955121.01187.0RepeatPumilio 3
HgenePUM1chr1:31532051chr1:31215396ENST00000257075-222956_991121.01187.0RepeatPumilio 4
HgenePUM1chr1:31532051chr1:31215396ENST00000257075-222992_1027121.01187.0RepeatPumilio 5
HgenePUM1chr1:31532051chr1:31215396ENST00000426105-2221028_1063121.01189.0RepeatPumilio 6
HgenePUM1chr1:31532051chr1:31215396ENST00000426105-2221064_1099121.01189.0RepeatPumilio 7
HgenePUM1chr1:31532051chr1:31215396ENST00000426105-2221103_1142121.01189.0RepeatPumilio 8
HgenePUM1chr1:31532051chr1:31215396ENST00000426105-222848_883121.01189.0RepeatPumilio 1
HgenePUM1chr1:31532051chr1:31215396ENST00000426105-222884_919121.01189.0RepeatPumilio 2
HgenePUM1chr1:31532051chr1:31215396ENST00000426105-222920_955121.01189.0RepeatPumilio 3
HgenePUM1chr1:31532051chr1:31215396ENST00000426105-222956_991121.01189.0RepeatPumilio 4
HgenePUM1chr1:31532051chr1:31215396ENST00000426105-222992_1027121.01189.0RepeatPumilio 5
HgenePUM1chr1:31532051chr1:31215396ENST00000440538-2221028_1063121.01163.0RepeatPumilio 6
HgenePUM1chr1:31532051chr1:31215396ENST00000440538-2221064_1099121.01163.0RepeatPumilio 7
HgenePUM1chr1:31532051chr1:31215396ENST00000440538-2221103_1142121.01163.0RepeatPumilio 8
HgenePUM1chr1:31532051chr1:31215396ENST00000440538-222848_883121.01163.0RepeatPumilio 1
HgenePUM1chr1:31532051chr1:31215396ENST00000440538-222884_919121.01163.0RepeatPumilio 2
HgenePUM1chr1:31532051chr1:31215396ENST00000440538-222920_955121.01163.0RepeatPumilio 3
HgenePUM1chr1:31532051chr1:31215396ENST00000440538-222956_991121.01163.0RepeatPumilio 4
HgenePUM1chr1:31532051chr1:31215396ENST00000440538-222992_1027121.01163.0RepeatPumilio 5
TgeneLAPTM5chr1:31501642chr1:31212784ENST000002945072819_3986.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31501642chr1:31212784ENST000002945072864_8486.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31501642chr1:31215396ENST000002945070819_3929.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31501643chr1:31215396ENST000002945070819_3929.0263.0TransmembraneHelical
TgeneLAPTM5chr1:31532051chr1:31215396ENST000002945070819_3929.0263.0TransmembraneHelical


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Fusion Gene Sequence for PUM1-LAPTM5


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000373741_ENST00000294507_TCGA-CU-A0YN-01A_PUM1_chr1_31501643_-_LAPTM5_chr1_31215396_length(transcript)=2807nt_BP=746nt
AACCCCGCGTGCCCAGCTCCAGGCCGTGTTCTCCCAGGTGCGGGCCGGCGGGACCCCGCCTTCGGCCCTGGCGGCGCGCGCTCGCCTAGC
GGGCGGGCACTCGCGCGCAGCGTTTGTGTTGCCTGCGAGTTTCCCGAGTTCACACAGGCCCTGGGTTGGCATGGCAACCAGGCAACCTGT
TCCAGAGCCGCCAGCCTTCTCCGCACATGCCGCTGCCACCGCCGGGGCCGGGGCCGGAGCCTATCCCAGGATGCACCGCGCCAACCCAGT
CCCCAGTGGGCCGCCATGTTGTCGGAGTGAAAGGTGTTGGTGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGG
ACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAG
CGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCC
AGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATA
GCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACATCAGGTGCGTTCCATGGATGAACTGAATCATGATTTTCAAGCACTTG
CTCTGGAGGGAAGAGCGATGGGAGAGATCATGAGCGTCTTGTTGTTCATCGAGCACTCAGTAGAGGTGGCCCATGGCAAGGCGTCCTGCA
AGCTCTCCCAGATGGGCTACCTCAGGATCGCTGACCTGATCTCCAGCTTCCTGCTCATCACCATGCTCTTCATCATCAGCCTGAGCCTAC
TGATCGGCGTAGTCAAGAACCGGGAGAAGTACCTGCTGCCCTTCCTGTCCCTGCAAATCATGGACTATCTCCTGTGCCTGCTCACCCTGC
TGGGCTCCTACATTGAGCTGCCCGCCTACCTCAAGTTGGCCTCCCGGAGCCGTGCTAGCTCCTCCAAGTTCCCCCTGATGACGCTGCAGC
TGCTGGACTTCTGCCTGAGCATCCTGACCCTCTGCAGCTCCTACATGGAAGTGCCCACCTATCTCAACTTCAAGTCCATGAACCACATGA
ATTACCTCCCCAGCCAGGAGGATATGCCTCATAACCAGTTCATCAAGATGATGATCATCTTTTCCATCGCCTTCATCACTGTCCTTATCT
TCAAGGTCTACATGTTCAAGTGCGTGTGGCGGTGCTACAGATTGATCAAGTGCATGAACTCGGTGGAGGAGAAGAGAAACTCCAAGATGC
TCCAGAAGGTGGTCCTGCCGTCCTACGAGGAAGCCCTGTCTTTGCCATCGAAGACCCCAGAGGGGGGCCCAGCACCACCCCCATACTCAG
AGGTGTGACCCTCGCCAGGCCCCAGCCCCAGTGCTGGGAGGGGTGGAGCTGCCTCATAATCTGCTTTTTTGCTTTGGTGGCCCCTGTGGC
CTGGGTGGGCCCTCCCGCCCCTCCCTGGCAGGACAATCTGCTTGTGTCTCCCTCGCTGGCCTGCTCCTCCTGCAGGGCCTGTGAGCTGCT
CACAACTGGGTCAACGCTTTAGGCTGAGTCACTCCTCGGGTCTCTCCATAATTCAGCCCAACAATGCTTGGTTTATTTCAATCAGCTCTG
ACACTTGTTTAGACGATTGGCCATTCTAAAGTTGGTGAGTTTGTCAAGCAACTATCGACTTGATCAGTTCAGCCAAGCAACTGACAAATC
AAAAACCCACTTGTCAGTTCAGTAAAATAATTTGGTCAAACAACAGTCTATTGCATTGATTTATAAATAGTTGTCAGTTCACATAGCAAT
TTAATCAAGTAATCATTAATTAGTTACCCCCTATATATAAATATATGTAATCAATTTCTTCAAATAGCTTGCTTACATGATAATCAATTA
GCCAACCATGAGTCATTTAGAATAGTGATAAATAGAATACACAGAATAGTGATGAAATTCAATTTAAAAAATCACGTTAGCCTCCAAACC
ATTTAATTCAAATGAACCCATCAACTGGATGCCAACTCTGGCGAATGTAGGACCTCTGAGTGGCTGTATAATTGTTAATTCAAATGAAAT
TCATTTAAACAGTTGACAAACTGTCATTCAACAATTAGCTCCAGGAAATAACAGTTATTTCATCATAAAACAGTCCCTTCAAACACACAA
TTGTTCTGCTGAAGAGTTGTCATCAACAATCCAATGCTCACCTATTCAGTTGCTCTGTGGTCAGTGTGGCTGCATAACAGTGGATTCCAT
GAAAGGAGTCATTTTAGTGATGAGCTGCCAGTCCATTCCCAGGCCAGGCTGTCGCTGGCCATCCATTCAGTCGATTCAGTCATAGGCGAA
TCTGTTCTGCCCGAGGCTTGTGGTCAAGCAAAAATTCAGCCCTGAAATCAGGCACATCTGTTCGTTGGACTAAACCCACAGGTTAGTTCA
GTCAAAGCAGGCAACCCCCTTGTGGGCACTGACCCTGCCACTGGGGTCATGGCGGTTGTGGCAGCTGGGGAGGTTTGGCCCCAACAGCCC
TCCTGTGCCTGCTTCCCTGTGTGTCGGGGTCCTCCAGGGAGCTGACCCAGAGGTGGAGGCCACGGAGGCAGGGTCTCTGGGGACTGTCGG
GGGGTACAGAGGGAGAAGGCTCTGCAAGAGCTCCCTGGCAATACCCCCTTGTGTAATTGCTTTGTGTGCGACAGGGAGGAAGTTTCAATA

>In-frame_ENST00000373741_ENST00000294507_TCGA-CU-A0YN-01A_PUM1_chr1_31501643_-_LAPTM5_chr1_31215396_length(amino acids)=444AA_start in transcript=113_stop in transcript=1447
MCCLRVSRVHTGPGLAWQPGNLFQSRQPSPHMPLPPPGPGPEPIPGCTAPTQSPVGRHVVGVKGVGGMSVACVLKRKAVLWQDSFSPHLK
HHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTG
DNIHAEHQVRSMDELNHDFQALALEGRAMGEIMSVLLFIEHSVEVAHGKASCKLSQMGYLRIADLISSFLLITMLFIISLSLLIGVVKNR
EKYLLPFLSLQIMDYLLCLLTLLGSYIELPAYLKLASRSRASSSKFPLMTLQLLDFCLSILTLCSSYMEVPTYLNFKSMNHMNYLPSQED

--------------------------------------------------------------
>In-frame_ENST00000373742_ENST00000294507_TCGA-CU-A0YN-01A_PUM1_chr1_31501643_-_LAPTM5_chr1_31215396_length(transcript)=2601nt_BP=540nt
ATGCCGCTGCCACCGCCGGGGCCGGGGCCGGAGCCTATCCCAGGATGCACCGCGCCAACCCAGTCCCCAGTGGGCCGCCATGTTGTCGGA
GTGAAAGGTGTTGGTGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACAT
CACCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAG
GCTCTTGCAGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTC
TTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGAT
AACATTCATGCAGAACATCAGGTGCGTTCCATGGATGAACTGAATCATGATTTTCAAGCACTTGCTCTGGAGGGAAGAGCGATGGGAGAG
ATCATGAGCGTCTTGTTGTTCATCGAGCACTCAGTAGAGGTGGCCCATGGCAAGGCGTCCTGCAAGCTCTCCCAGATGGGCTACCTCAGG
ATCGCTGACCTGATCTCCAGCTTCCTGCTCATCACCATGCTCTTCATCATCAGCCTGAGCCTACTGATCGGCGTAGTCAAGAACCGGGAG
AAGTACCTGCTGCCCTTCCTGTCCCTGCAAATCATGGACTATCTCCTGTGCCTGCTCACCCTGCTGGGCTCCTACATTGAGCTGCCCGCC
TACCTCAAGTTGGCCTCCCGGAGCCGTGCTAGCTCCTCCAAGTTCCCCCTGATGACGCTGCAGCTGCTGGACTTCTGCCTGAGCATCCTG
ACCCTCTGCAGCTCCTACATGGAAGTGCCCACCTATCTCAACTTCAAGTCCATGAACCACATGAATTACCTCCCCAGCCAGGAGGATATG
CCTCATAACCAGTTCATCAAGATGATGATCATCTTTTCCATCGCCTTCATCACTGTCCTTATCTTCAAGGTCTACATGTTCAAGTGCGTG
TGGCGGTGCTACAGATTGATCAAGTGCATGAACTCGGTGGAGGAGAAGAGAAACTCCAAGATGCTCCAGAAGGTGGTCCTGCCGTCCTAC
GAGGAAGCCCTGTCTTTGCCATCGAAGACCCCAGAGGGGGGCCCAGCACCACCCCCATACTCAGAGGTGTGACCCTCGCCAGGCCCCAGC
CCCAGTGCTGGGAGGGGTGGAGCTGCCTCATAATCTGCTTTTTTGCTTTGGTGGCCCCTGTGGCCTGGGTGGGCCCTCCCGCCCCTCCCT
GGCAGGACAATCTGCTTGTGTCTCCCTCGCTGGCCTGCTCCTCCTGCAGGGCCTGTGAGCTGCTCACAACTGGGTCAACGCTTTAGGCTG
AGTCACTCCTCGGGTCTCTCCATAATTCAGCCCAACAATGCTTGGTTTATTTCAATCAGCTCTGACACTTGTTTAGACGATTGGCCATTC
TAAAGTTGGTGAGTTTGTCAAGCAACTATCGACTTGATCAGTTCAGCCAAGCAACTGACAAATCAAAAACCCACTTGTCAGTTCAGTAAA
ATAATTTGGTCAAACAACAGTCTATTGCATTGATTTATAAATAGTTGTCAGTTCACATAGCAATTTAATCAAGTAATCATTAATTAGTTA
CCCCCTATATATAAATATATGTAATCAATTTCTTCAAATAGCTTGCTTACATGATAATCAATTAGCCAACCATGAGTCATTTAGAATAGT
GATAAATAGAATACACAGAATAGTGATGAAATTCAATTTAAAAAATCACGTTAGCCTCCAAACCATTTAATTCAAATGAACCCATCAACT
GGATGCCAACTCTGGCGAATGTAGGACCTCTGAGTGGCTGTATAATTGTTAATTCAAATGAAATTCATTTAAACAGTTGACAAACTGTCA
TTCAACAATTAGCTCCAGGAAATAACAGTTATTTCATCATAAAACAGTCCCTTCAAACACACAATTGTTCTGCTGAAGAGTTGTCATCAA
CAATCCAATGCTCACCTATTCAGTTGCTCTGTGGTCAGTGTGGCTGCATAACAGTGGATTCCATGAAAGGAGTCATTTTAGTGATGAGCT
GCCAGTCCATTCCCAGGCCAGGCTGTCGCTGGCCATCCATTCAGTCGATTCAGTCATAGGCGAATCTGTTCTGCCCGAGGCTTGTGGTCA
AGCAAAAATTCAGCCCTGAAATCAGGCACATCTGTTCGTTGGACTAAACCCACAGGTTAGTTCAGTCAAAGCAGGCAACCCCCTTGTGGG
CACTGACCCTGCCACTGGGGTCATGGCGGTTGTGGCAGCTGGGGAGGTTTGGCCCCAACAGCCCTCCTGTGCCTGCTTCCCTGTGTGTCG
GGGTCCTCCAGGGAGCTGACCCAGAGGTGGAGGCCACGGAGGCAGGGTCTCTGGGGACTGTCGGGGGGTACAGAGGGAGAAGGCTCTGCA

>In-frame_ENST00000373742_ENST00000294507_TCGA-CU-A0YN-01A_PUM1_chr1_31501643_-_LAPTM5_chr1_31215396_length(amino acids)=413AA_start in transcript=0_stop in transcript=1241
MPLPPPGPGPEPIPGCTAPTQSPVGRHVVGVKGVGGMSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQ
ALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGE
IMSVLLFIEHSVEVAHGKASCKLSQMGYLRIADLISSFLLITMLFIISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLGSYIELPA
YLKLASRSRASSSKFPLMTLQLLDFCLSILTLCSSYMEVPTYLNFKSMNHMNYLPSQEDMPHNQFIKMMIIFSIAFITVLIFKVYMFKCV

--------------------------------------------------------------
>In-frame_ENST00000373741_ENST00000294507_TCGA-13-1488-01A_PUM1_chr1_31532051_-_LAPTM5_chr1_31215396_length(transcript)=2738nt_BP=677nt
AACCCCGCGTGCCCAGCTCCAGGCCGTGTTCTCCCAGGTGCGGGCCGGCGGGACCCCGCCTTCGGCCCTGGCGGCGCGCGCTCGCCTAGC
GGGCGGGCACTCGCGCGCAGCGTTTGTGTTGCCTGCGAGTTTCCCGAGTTCACACAGGCCCTGGGTTGGCATGGCAACCAGGCAACCTGT
TCCAGAGCCGCCAGCCTTCTCCGCACATGCCGCTGCCACCGCCGGGGCCGGGGCCGGAGCCTATCCCAGGATGCACCGCGCCAACCCAGT
CCCCAGTGGGCCGCCATGTTGTCGGAGTGAAAGGTGTTGGTGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGG
ACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAG
CGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCC
AGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATA
GCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACATCAGATCATGAGCGTCTTGTTGTTCATCGAGCACTCAGTAGAGGTGG
CCCATGGCAAGGCGTCCTGCAAGCTCTCCCAGATGGGCTACCTCAGGATCGCTGACCTGATCTCCAGCTTCCTGCTCATCACCATGCTCT
TCATCATCAGCCTGAGCCTACTGATCGGCGTAGTCAAGAACCGGGAGAAGTACCTGCTGCCCTTCCTGTCCCTGCAAATCATGGACTATC
TCCTGTGCCTGCTCACCCTGCTGGGCTCCTACATTGAGCTGCCCGCCTACCTCAAGTTGGCCTCCCGGAGCCGTGCTAGCTCCTCCAAGT
TCCCCCTGATGACGCTGCAGCTGCTGGACTTCTGCCTGAGCATCCTGACCCTCTGCAGCTCCTACATGGAAGTGCCCACCTATCTCAACT
TCAAGTCCATGAACCACATGAATTACCTCCCCAGCCAGGAGGATATGCCTCATAACCAGTTCATCAAGATGATGATCATCTTTTCCATCG
CCTTCATCACTGTCCTTATCTTCAAGGTCTACATGTTCAAGTGCGTGTGGCGGTGCTACAGATTGATCAAGTGCATGAACTCGGTGGAGG
AGAAGAGAAACTCCAAGATGCTCCAGAAGGTGGTCCTGCCGTCCTACGAGGAAGCCCTGTCTTTGCCATCGAAGACCCCAGAGGGGGGCC
CAGCACCACCCCCATACTCAGAGGTGTGACCCTCGCCAGGCCCCAGCCCCAGTGCTGGGAGGGGTGGAGCTGCCTCATAATCTGCTTTTT
TGCTTTGGTGGCCCCTGTGGCCTGGGTGGGCCCTCCCGCCCCTCCCTGGCAGGACAATCTGCTTGTGTCTCCCTCGCTGGCCTGCTCCTC
CTGCAGGGCCTGTGAGCTGCTCACAACTGGGTCAACGCTTTAGGCTGAGTCACTCCTCGGGTCTCTCCATAATTCAGCCCAACAATGCTT
GGTTTATTTCAATCAGCTCTGACACTTGTTTAGACGATTGGCCATTCTAAAGTTGGTGAGTTTGTCAAGCAACTATCGACTTGATCAGTT
CAGCCAAGCAACTGACAAATCAAAAACCCACTTGTCAGTTCAGTAAAATAATTTGGTCAAACAACAGTCTATTGCATTGATTTATAAATA
GTTGTCAGTTCACATAGCAATTTAATCAAGTAATCATTAATTAGTTACCCCCTATATATAAATATATGTAATCAATTTCTTCAAATAGCT
TGCTTACATGATAATCAATTAGCCAACCATGAGTCATTTAGAATAGTGATAAATAGAATACACAGAATAGTGATGAAATTCAATTTAAAA
AATCACGTTAGCCTCCAAACCATTTAATTCAAATGAACCCATCAACTGGATGCCAACTCTGGCGAATGTAGGACCTCTGAGTGGCTGTAT
AATTGTTAATTCAAATGAAATTCATTTAAACAGTTGACAAACTGTCATTCAACAATTAGCTCCAGGAAATAACAGTTATTTCATCATAAA
ACAGTCCCTTCAAACACACAATTGTTCTGCTGAAGAGTTGTCATCAACAATCCAATGCTCACCTATTCAGTTGCTCTGTGGTCAGTGTGG
CTGCATAACAGTGGATTCCATGAAAGGAGTCATTTTAGTGATGAGCTGCCAGTCCATTCCCAGGCCAGGCTGTCGCTGGCCATCCATTCA
GTCGATTCAGTCATAGGCGAATCTGTTCTGCCCGAGGCTTGTGGTCAAGCAAAAATTCAGCCCTGAAATCAGGCACATCTGTTCGTTGGA
CTAAACCCACAGGTTAGTTCAGTCAAAGCAGGCAACCCCCTTGTGGGCACTGACCCTGCCACTGGGGTCATGGCGGTTGTGGCAGCTGGG
GAGGTTTGGCCCCAACAGCCCTCCTGTGCCTGCTTCCCTGTGTGTCGGGGTCCTCCAGGGAGCTGACCCAGAGGTGGAGGCCACGGAGGC
AGGGTCTCTGGGGACTGTCGGGGGGTACAGAGGGAGAAGGCTCTGCAAGAGCTCCCTGGCAATACCCCCTTGTGTAATTGCTTTGTGTGC

>In-frame_ENST00000373741_ENST00000294507_TCGA-13-1488-01A_PUM1_chr1_31532051_-_LAPTM5_chr1_31215396_length(amino acids)=421AA_start in transcript=113_stop in transcript=1378
MCCLRVSRVHTGPGLAWQPGNLFQSRQPSPHMPLPPPGPGPEPIPGCTAPTQSPVGRHVVGVKGVGGMSVACVLKRKAVLWQDSFSPHLK
HHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTG
DNIHAEHQIMSVLLFIEHSVEVAHGKASCKLSQMGYLRIADLISSFLLITMLFIISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLL
GSYIELPAYLKLASRSRASSSKFPLMTLQLLDFCLSILTLCSSYMEVPTYLNFKSMNHMNYLPSQEDMPHNQFIKMMIIFSIAFITVLIF

--------------------------------------------------------------
>In-frame_ENST00000373742_ENST00000294507_TCGA-13-1488-01A_PUM1_chr1_31532051_-_LAPTM5_chr1_31215396_length(transcript)=2532nt_BP=471nt
ATGCCGCTGCCACCGCCGGGGCCGGGGCCGGAGCCTATCCCAGGATGCACCGCGCCAACCCAGTCCCCAGTGGGCCGCCATGTTGTCGGA
GTGAAAGGTGTTGGTGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACAT
CACCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAG
GCTCTTGCAGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTC
TTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGAT
AACATTCATGCAGAACATCAGATCATGAGCGTCTTGTTGTTCATCGAGCACTCAGTAGAGGTGGCCCATGGCAAGGCGTCCTGCAAGCTC
TCCCAGATGGGCTACCTCAGGATCGCTGACCTGATCTCCAGCTTCCTGCTCATCACCATGCTCTTCATCATCAGCCTGAGCCTACTGATC
GGCGTAGTCAAGAACCGGGAGAAGTACCTGCTGCCCTTCCTGTCCCTGCAAATCATGGACTATCTCCTGTGCCTGCTCACCCTGCTGGGC
TCCTACATTGAGCTGCCCGCCTACCTCAAGTTGGCCTCCCGGAGCCGTGCTAGCTCCTCCAAGTTCCCCCTGATGACGCTGCAGCTGCTG
GACTTCTGCCTGAGCATCCTGACCCTCTGCAGCTCCTACATGGAAGTGCCCACCTATCTCAACTTCAAGTCCATGAACCACATGAATTAC
CTCCCCAGCCAGGAGGATATGCCTCATAACCAGTTCATCAAGATGATGATCATCTTTTCCATCGCCTTCATCACTGTCCTTATCTTCAAG
GTCTACATGTTCAAGTGCGTGTGGCGGTGCTACAGATTGATCAAGTGCATGAACTCGGTGGAGGAGAAGAGAAACTCCAAGATGCTCCAG
AAGGTGGTCCTGCCGTCCTACGAGGAAGCCCTGTCTTTGCCATCGAAGACCCCAGAGGGGGGCCCAGCACCACCCCCATACTCAGAGGTG
TGACCCTCGCCAGGCCCCAGCCCCAGTGCTGGGAGGGGTGGAGCTGCCTCATAATCTGCTTTTTTGCTTTGGTGGCCCCTGTGGCCTGGG
TGGGCCCTCCCGCCCCTCCCTGGCAGGACAATCTGCTTGTGTCTCCCTCGCTGGCCTGCTCCTCCTGCAGGGCCTGTGAGCTGCTCACAA
CTGGGTCAACGCTTTAGGCTGAGTCACTCCTCGGGTCTCTCCATAATTCAGCCCAACAATGCTTGGTTTATTTCAATCAGCTCTGACACT
TGTTTAGACGATTGGCCATTCTAAAGTTGGTGAGTTTGTCAAGCAACTATCGACTTGATCAGTTCAGCCAAGCAACTGACAAATCAAAAA
CCCACTTGTCAGTTCAGTAAAATAATTTGGTCAAACAACAGTCTATTGCATTGATTTATAAATAGTTGTCAGTTCACATAGCAATTTAAT
CAAGTAATCATTAATTAGTTACCCCCTATATATAAATATATGTAATCAATTTCTTCAAATAGCTTGCTTACATGATAATCAATTAGCCAA
CCATGAGTCATTTAGAATAGTGATAAATAGAATACACAGAATAGTGATGAAATTCAATTTAAAAAATCACGTTAGCCTCCAAACCATTTA
ATTCAAATGAACCCATCAACTGGATGCCAACTCTGGCGAATGTAGGACCTCTGAGTGGCTGTATAATTGTTAATTCAAATGAAATTCATT
TAAACAGTTGACAAACTGTCATTCAACAATTAGCTCCAGGAAATAACAGTTATTTCATCATAAAACAGTCCCTTCAAACACACAATTGTT
CTGCTGAAGAGTTGTCATCAACAATCCAATGCTCACCTATTCAGTTGCTCTGTGGTCAGTGTGGCTGCATAACAGTGGATTCCATGAAAG
GAGTCATTTTAGTGATGAGCTGCCAGTCCATTCCCAGGCCAGGCTGTCGCTGGCCATCCATTCAGTCGATTCAGTCATAGGCGAATCTGT
TCTGCCCGAGGCTTGTGGTCAAGCAAAAATTCAGCCCTGAAATCAGGCACATCTGTTCGTTGGACTAAACCCACAGGTTAGTTCAGTCAA
AGCAGGCAACCCCCTTGTGGGCACTGACCCTGCCACTGGGGTCATGGCGGTTGTGGCAGCTGGGGAGGTTTGGCCCCAACAGCCCTCCTG
TGCCTGCTTCCCTGTGTGTCGGGGTCCTCCAGGGAGCTGACCCAGAGGTGGAGGCCACGGAGGCAGGGTCTCTGGGGACTGTCGGGGGGT
ACAGAGGGAGAAGGCTCTGCAAGAGCTCCCTGGCAATACCCCCTTGTGTAATTGCTTTGTGTGCGACAGGGAGGAAGTTTCAATAAAGCA

>In-frame_ENST00000373742_ENST00000294507_TCGA-13-1488-01A_PUM1_chr1_31532051_-_LAPTM5_chr1_31215396_length(amino acids)=390AA_start in transcript=0_stop in transcript=1172
MPLPPPGPGPEPIPGCTAPTQSPVGRHVVGVKGVGGMSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQ
ALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQIMSVLLFIEHSVEVAHGKASCKL
SQMGYLRIADLISSFLLITMLFIISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLGSYIELPAYLKLASRSRASSSKFPLMTLQLL
DFCLSILTLCSSYMEVPTYLNFKSMNHMNYLPSQEDMPHNQFIKMMIIFSIAFITVLIFKVYMFKCVWRCYRLIKCMNSVEEKRNSKMLQ

--------------------------------------------------------------
>In-frame_ENST00000373741_ENST00000294507_TCGA-CD-A48C_PUM1_chr1_31501642_-_LAPTM5_chr1_31215396_length(transcript)=2807nt_BP=746nt
AACCCCGCGTGCCCAGCTCCAGGCCGTGTTCTCCCAGGTGCGGGCCGGCGGGACCCCGCCTTCGGCCCTGGCGGCGCGCGCTCGCCTAGC
GGGCGGGCACTCGCGCGCAGCGTTTGTGTTGCCTGCGAGTTTCCCGAGTTCACACAGGCCCTGGGTTGGCATGGCAACCAGGCAACCTGT
TCCAGAGCCGCCAGCCTTCTCCGCACATGCCGCTGCCACCGCCGGGGCCGGGGCCGGAGCCTATCCCAGGATGCACCGCGCCAACCCAGT
CCCCAGTGGGCCGCCATGTTGTCGGAGTGAAAGGTGTTGGTGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGG
ACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAG
CGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCC
AGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATA
GCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACATCAGGTGCGTTCCATGGATGAACTGAATCATGATTTTCAAGCACTTG
CTCTGGAGGGAAGAGCGATGGGAGAGATCATGAGCGTCTTGTTGTTCATCGAGCACTCAGTAGAGGTGGCCCATGGCAAGGCGTCCTGCA
AGCTCTCCCAGATGGGCTACCTCAGGATCGCTGACCTGATCTCCAGCTTCCTGCTCATCACCATGCTCTTCATCATCAGCCTGAGCCTAC
TGATCGGCGTAGTCAAGAACCGGGAGAAGTACCTGCTGCCCTTCCTGTCCCTGCAAATCATGGACTATCTCCTGTGCCTGCTCACCCTGC
TGGGCTCCTACATTGAGCTGCCCGCCTACCTCAAGTTGGCCTCCCGGAGCCGTGCTAGCTCCTCCAAGTTCCCCCTGATGACGCTGCAGC
TGCTGGACTTCTGCCTGAGCATCCTGACCCTCTGCAGCTCCTACATGGAAGTGCCCACCTATCTCAACTTCAAGTCCATGAACCACATGA
ATTACCTCCCCAGCCAGGAGGATATGCCTCATAACCAGTTCATCAAGATGATGATCATCTTTTCCATCGCCTTCATCACTGTCCTTATCT
TCAAGGTCTACATGTTCAAGTGCGTGTGGCGGTGCTACAGATTGATCAAGTGCATGAACTCGGTGGAGGAGAAGAGAAACTCCAAGATGC
TCCAGAAGGTGGTCCTGCCGTCCTACGAGGAAGCCCTGTCTTTGCCATCGAAGACCCCAGAGGGGGGCCCAGCACCACCCCCATACTCAG
AGGTGTGACCCTCGCCAGGCCCCAGCCCCAGTGCTGGGAGGGGTGGAGCTGCCTCATAATCTGCTTTTTTGCTTTGGTGGCCCCTGTGGC
CTGGGTGGGCCCTCCCGCCCCTCCCTGGCAGGACAATCTGCTTGTGTCTCCCTCGCTGGCCTGCTCCTCCTGCAGGGCCTGTGAGCTGCT
CACAACTGGGTCAACGCTTTAGGCTGAGTCACTCCTCGGGTCTCTCCATAATTCAGCCCAACAATGCTTGGTTTATTTCAATCAGCTCTG
ACACTTGTTTAGACGATTGGCCATTCTAAAGTTGGTGAGTTTGTCAAGCAACTATCGACTTGATCAGTTCAGCCAAGCAACTGACAAATC
AAAAACCCACTTGTCAGTTCAGTAAAATAATTTGGTCAAACAACAGTCTATTGCATTGATTTATAAATAGTTGTCAGTTCACATAGCAAT
TTAATCAAGTAATCATTAATTAGTTACCCCCTATATATAAATATATGTAATCAATTTCTTCAAATAGCTTGCTTACATGATAATCAATTA
GCCAACCATGAGTCATTTAGAATAGTGATAAATAGAATACACAGAATAGTGATGAAATTCAATTTAAAAAATCACGTTAGCCTCCAAACC
ATTTAATTCAAATGAACCCATCAACTGGATGCCAACTCTGGCGAATGTAGGACCTCTGAGTGGCTGTATAATTGTTAATTCAAATGAAAT
TCATTTAAACAGTTGACAAACTGTCATTCAACAATTAGCTCCAGGAAATAACAGTTATTTCATCATAAAACAGTCCCTTCAAACACACAA
TTGTTCTGCTGAAGAGTTGTCATCAACAATCCAATGCTCACCTATTCAGTTGCTCTGTGGTCAGTGTGGCTGCATAACAGTGGATTCCAT
GAAAGGAGTCATTTTAGTGATGAGCTGCCAGTCCATTCCCAGGCCAGGCTGTCGCTGGCCATCCATTCAGTCGATTCAGTCATAGGCGAA
TCTGTTCTGCCCGAGGCTTGTGGTCAAGCAAAAATTCAGCCCTGAAATCAGGCACATCTGTTCGTTGGACTAAACCCACAGGTTAGTTCA
GTCAAAGCAGGCAACCCCCTTGTGGGCACTGACCCTGCCACTGGGGTCATGGCGGTTGTGGCAGCTGGGGAGGTTTGGCCCCAACAGCCC
TCCTGTGCCTGCTTCCCTGTGTGTCGGGGTCCTCCAGGGAGCTGACCCAGAGGTGGAGGCCACGGAGGCAGGGTCTCTGGGGACTGTCGG
GGGGTACAGAGGGAGAAGGCTCTGCAAGAGCTCCCTGGCAATACCCCCTTGTGTAATTGCTTTGTGTGCGACAGGGAGGAAGTTTCAATA

>In-frame_ENST00000373741_ENST00000294507_TCGA-CD-A48C_PUM1_chr1_31501642_-_LAPTM5_chr1_31215396_length(amino acids)=444AA_start in transcript=113_stop in transcript=1447
MCCLRVSRVHTGPGLAWQPGNLFQSRQPSPHMPLPPPGPGPEPIPGCTAPTQSPVGRHVVGVKGVGGMSVACVLKRKAVLWQDSFSPHLK
HHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTG
DNIHAEHQVRSMDELNHDFQALALEGRAMGEIMSVLLFIEHSVEVAHGKASCKLSQMGYLRIADLISSFLLITMLFIISLSLLIGVVKNR
EKYLLPFLSLQIMDYLLCLLTLLGSYIELPAYLKLASRSRASSSKFPLMTLQLLDFCLSILTLCSSYMEVPTYLNFKSMNHMNYLPSQED

--------------------------------------------------------------
>In-frame_ENST00000373742_ENST00000294507_TCGA-CD-A48C_PUM1_chr1_31501642_-_LAPTM5_chr1_31215396_length(transcript)=2601nt_BP=540nt
ATGCCGCTGCCACCGCCGGGGCCGGGGCCGGAGCCTATCCCAGGATGCACCGCGCCAACCCAGTCCCCAGTGGGCCGCCATGTTGTCGGA
GTGAAAGGTGTTGGTGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACAT
CACCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAG
GCTCTTGCAGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTC
TTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGAT
AACATTCATGCAGAACATCAGGTGCGTTCCATGGATGAACTGAATCATGATTTTCAAGCACTTGCTCTGGAGGGAAGAGCGATGGGAGAG
ATCATGAGCGTCTTGTTGTTCATCGAGCACTCAGTAGAGGTGGCCCATGGCAAGGCGTCCTGCAAGCTCTCCCAGATGGGCTACCTCAGG
ATCGCTGACCTGATCTCCAGCTTCCTGCTCATCACCATGCTCTTCATCATCAGCCTGAGCCTACTGATCGGCGTAGTCAAGAACCGGGAG
AAGTACCTGCTGCCCTTCCTGTCCCTGCAAATCATGGACTATCTCCTGTGCCTGCTCACCCTGCTGGGCTCCTACATTGAGCTGCCCGCC
TACCTCAAGTTGGCCTCCCGGAGCCGTGCTAGCTCCTCCAAGTTCCCCCTGATGACGCTGCAGCTGCTGGACTTCTGCCTGAGCATCCTG
ACCCTCTGCAGCTCCTACATGGAAGTGCCCACCTATCTCAACTTCAAGTCCATGAACCACATGAATTACCTCCCCAGCCAGGAGGATATG
CCTCATAACCAGTTCATCAAGATGATGATCATCTTTTCCATCGCCTTCATCACTGTCCTTATCTTCAAGGTCTACATGTTCAAGTGCGTG
TGGCGGTGCTACAGATTGATCAAGTGCATGAACTCGGTGGAGGAGAAGAGAAACTCCAAGATGCTCCAGAAGGTGGTCCTGCCGTCCTAC
GAGGAAGCCCTGTCTTTGCCATCGAAGACCCCAGAGGGGGGCCCAGCACCACCCCCATACTCAGAGGTGTGACCCTCGCCAGGCCCCAGC
CCCAGTGCTGGGAGGGGTGGAGCTGCCTCATAATCTGCTTTTTTGCTTTGGTGGCCCCTGTGGCCTGGGTGGGCCCTCCCGCCCCTCCCT
GGCAGGACAATCTGCTTGTGTCTCCCTCGCTGGCCTGCTCCTCCTGCAGGGCCTGTGAGCTGCTCACAACTGGGTCAACGCTTTAGGCTG
AGTCACTCCTCGGGTCTCTCCATAATTCAGCCCAACAATGCTTGGTTTATTTCAATCAGCTCTGACACTTGTTTAGACGATTGGCCATTC
TAAAGTTGGTGAGTTTGTCAAGCAACTATCGACTTGATCAGTTCAGCCAAGCAACTGACAAATCAAAAACCCACTTGTCAGTTCAGTAAA
ATAATTTGGTCAAACAACAGTCTATTGCATTGATTTATAAATAGTTGTCAGTTCACATAGCAATTTAATCAAGTAATCATTAATTAGTTA
CCCCCTATATATAAATATATGTAATCAATTTCTTCAAATAGCTTGCTTACATGATAATCAATTAGCCAACCATGAGTCATTTAGAATAGT
GATAAATAGAATACACAGAATAGTGATGAAATTCAATTTAAAAAATCACGTTAGCCTCCAAACCATTTAATTCAAATGAACCCATCAACT
GGATGCCAACTCTGGCGAATGTAGGACCTCTGAGTGGCTGTATAATTGTTAATTCAAATGAAATTCATTTAAACAGTTGACAAACTGTCA
TTCAACAATTAGCTCCAGGAAATAACAGTTATTTCATCATAAAACAGTCCCTTCAAACACACAATTGTTCTGCTGAAGAGTTGTCATCAA
CAATCCAATGCTCACCTATTCAGTTGCTCTGTGGTCAGTGTGGCTGCATAACAGTGGATTCCATGAAAGGAGTCATTTTAGTGATGAGCT
GCCAGTCCATTCCCAGGCCAGGCTGTCGCTGGCCATCCATTCAGTCGATTCAGTCATAGGCGAATCTGTTCTGCCCGAGGCTTGTGGTCA
AGCAAAAATTCAGCCCTGAAATCAGGCACATCTGTTCGTTGGACTAAACCCACAGGTTAGTTCAGTCAAAGCAGGCAACCCCCTTGTGGG
CACTGACCCTGCCACTGGGGTCATGGCGGTTGTGGCAGCTGGGGAGGTTTGGCCCCAACAGCCCTCCTGTGCCTGCTTCCCTGTGTGTCG
GGGTCCTCCAGGGAGCTGACCCAGAGGTGGAGGCCACGGAGGCAGGGTCTCTGGGGACTGTCGGGGGGTACAGAGGGAGAAGGCTCTGCA

>In-frame_ENST00000373742_ENST00000294507_TCGA-CD-A48C_PUM1_chr1_31501642_-_LAPTM5_chr1_31215396_length(amino acids)=413AA_start in transcript=0_stop in transcript=1241
MPLPPPGPGPEPIPGCTAPTQSPVGRHVVGVKGVGGMSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQ
ALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGE
IMSVLLFIEHSVEVAHGKASCKLSQMGYLRIADLISSFLLITMLFIISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLGSYIELPA
YLKLASRSRASSSKFPLMTLQLLDFCLSILTLCSSYMEVPTYLNFKSMNHMNYLPSQEDMPHNQFIKMMIIFSIAFITVLIFKVYMFKCV

--------------------------------------------------------------
>In-frame_ENST00000373741_ENST00000294507_TCGA-CD-A48C_PUM1_chr1_31501642_-_LAPTM5_chr1_31212784_length(transcript)=2636nt_BP=746nt
AACCCCGCGTGCCCAGCTCCAGGCCGTGTTCTCCCAGGTGCGGGCCGGCGGGACCCCGCCTTCGGCCCTGGCGGCGCGCGCTCGCCTAGC
GGGCGGGCACTCGCGCGCAGCGTTTGTGTTGCCTGCGAGTTTCCCGAGTTCACACAGGCCCTGGGTTGGCATGGCAACCAGGCAACCTGT
TCCAGAGCCGCCAGCCTTCTCCGCACATGCCGCTGCCACCGCCGGGGCCGGGGCCGGAGCCTATCCCAGGATGCACCGCGCCAACCCAGT
CCCCAGTGGGCCGCCATGTTGTCGGAGTGAAAGGTGTTGGTGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGG
ACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAG
CGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCC
AGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATA
GCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACATCAGGTGCGTTCCATGGATGAACTGAATCATGATTTTCAAGCACTTG
CTCTGGAGGGAAGAGCGATGGGAGAGAACCGGGAGAAGTACCTGCTGCCCTTCCTGTCCCTGCAAATCATGGACTATCTCCTGTGCCTGC
TCACCCTGCTGGGCTCCTACATTGAGCTGCCCGCCTACCTCAAGTTGGCCTCCCGGAGCCGTGCTAGCTCCTCCAAGTTCCCCCTGATGA
CGCTGCAGCTGCTGGACTTCTGCCTGAGCATCCTGACCCTCTGCAGCTCCTACATGGAAGTGCCCACCTATCTCAACTTCAAGTCCATGA
ACCACATGAATTACCTCCCCAGCCAGGAGGATATGCCTCATAACCAGTTCATCAAGATGATGATCATCTTTTCCATCGCCTTCATCACTG
TCCTTATCTTCAAGGTCTACATGTTCAAGTGCGTGTGGCGGTGCTACAGATTGATCAAGTGCATGAACTCGGTGGAGGAGAAGAGAAACT
CCAAGATGCTCCAGAAGGTGGTCCTGCCGTCCTACGAGGAAGCCCTGTCTTTGCCATCGAAGACCCCAGAGGGGGGCCCAGCACCACCCC
CATACTCAGAGGTGTGACCCTCGCCAGGCCCCAGCCCCAGTGCTGGGAGGGGTGGAGCTGCCTCATAATCTGCTTTTTTGCTTTGGTGGC
CCCTGTGGCCTGGGTGGGCCCTCCCGCCCCTCCCTGGCAGGACAATCTGCTTGTGTCTCCCTCGCTGGCCTGCTCCTCCTGCAGGGCCTG
TGAGCTGCTCACAACTGGGTCAACGCTTTAGGCTGAGTCACTCCTCGGGTCTCTCCATAATTCAGCCCAACAATGCTTGGTTTATTTCAA
TCAGCTCTGACACTTGTTTAGACGATTGGCCATTCTAAAGTTGGTGAGTTTGTCAAGCAACTATCGACTTGATCAGTTCAGCCAAGCAAC
TGACAAATCAAAAACCCACTTGTCAGTTCAGTAAAATAATTTGGTCAAACAACAGTCTATTGCATTGATTTATAAATAGTTGTCAGTTCA
CATAGCAATTTAATCAAGTAATCATTAATTAGTTACCCCCTATATATAAATATATGTAATCAATTTCTTCAAATAGCTTGCTTACATGAT
AATCAATTAGCCAACCATGAGTCATTTAGAATAGTGATAAATAGAATACACAGAATAGTGATGAAATTCAATTTAAAAAATCACGTTAGC
CTCCAAACCATTTAATTCAAATGAACCCATCAACTGGATGCCAACTCTGGCGAATGTAGGACCTCTGAGTGGCTGTATAATTGTTAATTC
AAATGAAATTCATTTAAACAGTTGACAAACTGTCATTCAACAATTAGCTCCAGGAAATAACAGTTATTTCATCATAAAACAGTCCCTTCA
AACACACAATTGTTCTGCTGAAGAGTTGTCATCAACAATCCAATGCTCACCTATTCAGTTGCTCTGTGGTCAGTGTGGCTGCATAACAGT
GGATTCCATGAAAGGAGTCATTTTAGTGATGAGCTGCCAGTCCATTCCCAGGCCAGGCTGTCGCTGGCCATCCATTCAGTCGATTCAGTC
ATAGGCGAATCTGTTCTGCCCGAGGCTTGTGGTCAAGCAAAAATTCAGCCCTGAAATCAGGCACATCTGTTCGTTGGACTAAACCCACAG
GTTAGTTCAGTCAAAGCAGGCAACCCCCTTGTGGGCACTGACCCTGCCACTGGGGTCATGGCGGTTGTGGCAGCTGGGGAGGTTTGGCCC
CAACAGCCCTCCTGTGCCTGCTTCCCTGTGTGTCGGGGTCCTCCAGGGAGCTGACCCAGAGGTGGAGGCCACGGAGGCAGGGTCTCTGGG
GACTGTCGGGGGGTACAGAGGGAGAAGGCTCTGCAAGAGCTCCCTGGCAATACCCCCTTGTGTAATTGCTTTGTGTGCGACAGGGAGGAA

>In-frame_ENST00000373741_ENST00000294507_TCGA-CD-A48C_PUM1_chr1_31501642_-_LAPTM5_chr1_31212784_length(amino acids)=394AA_start in transcript=1183_stop in transcript=2
MEHLGVSLLLHRVHALDQSVAPPHALEHVDLEDKDSDEGDGKDDHHLDELVMRHILLAGEVIHVVHGLEVEIGGHFHVGAAEGQDAQAEV
QQLQRHQGELGGASTAPGGQLEVGGQLNVGAQQGEQAQEIVHDLQGQEGQQVLLPVLSHRSSLQSKCLKIMIQFIHGTHLMFCMNVIPSR
PSMFAIIIAASSTSSSPKLLTMLPLKEVVHHSVVLGTACNSYRSWDRAGVSPSCKSLICSWLWLRLRPCSRCQNNRHVGISWFLRVMFQV
GAERVLPKHCFSLQDTCNAHSTNTFHSDNMAAHWGLGWRGASWDRLRPRPRRWQRHVRRRLAALEQVAWLPCQPRACVNSGNSQATQTLR

--------------------------------------------------------------
>In-frame_ENST00000373742_ENST00000294507_TCGA-CD-A48C_PUM1_chr1_31501642_-_LAPTM5_chr1_31212784_length(transcript)=2430nt_BP=540nt
ATGCCGCTGCCACCGCCGGGGCCGGGGCCGGAGCCTATCCCAGGATGCACCGCGCCAACCCAGTCCCCAGTGGGCCGCCATGTTGTCGGA
GTGAAAGGTGTTGGTGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACAT
CACCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAG
GCTCTTGCAGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTC
TTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGAT
AACATTCATGCAGAACATCAGGTGCGTTCCATGGATGAACTGAATCATGATTTTCAAGCACTTGCTCTGGAGGGAAGAGCGATGGGAGAG
AACCGGGAGAAGTACCTGCTGCCCTTCCTGTCCCTGCAAATCATGGACTATCTCCTGTGCCTGCTCACCCTGCTGGGCTCCTACATTGAG
CTGCCCGCCTACCTCAAGTTGGCCTCCCGGAGCCGTGCTAGCTCCTCCAAGTTCCCCCTGATGACGCTGCAGCTGCTGGACTTCTGCCTG
AGCATCCTGACCCTCTGCAGCTCCTACATGGAAGTGCCCACCTATCTCAACTTCAAGTCCATGAACCACATGAATTACCTCCCCAGCCAG
GAGGATATGCCTCATAACCAGTTCATCAAGATGATGATCATCTTTTCCATCGCCTTCATCACTGTCCTTATCTTCAAGGTCTACATGTTC
AAGTGCGTGTGGCGGTGCTACAGATTGATCAAGTGCATGAACTCGGTGGAGGAGAAGAGAAACTCCAAGATGCTCCAGAAGGTGGTCCTG
CCGTCCTACGAGGAAGCCCTGTCTTTGCCATCGAAGACCCCAGAGGGGGGCCCAGCACCACCCCCATACTCAGAGGTGTGACCCTCGCCA
GGCCCCAGCCCCAGTGCTGGGAGGGGTGGAGCTGCCTCATAATCTGCTTTTTTGCTTTGGTGGCCCCTGTGGCCTGGGTGGGCCCTCCCG
CCCCTCCCTGGCAGGACAATCTGCTTGTGTCTCCCTCGCTGGCCTGCTCCTCCTGCAGGGCCTGTGAGCTGCTCACAACTGGGTCAACGC
TTTAGGCTGAGTCACTCCTCGGGTCTCTCCATAATTCAGCCCAACAATGCTTGGTTTATTTCAATCAGCTCTGACACTTGTTTAGACGAT
TGGCCATTCTAAAGTTGGTGAGTTTGTCAAGCAACTATCGACTTGATCAGTTCAGCCAAGCAACTGACAAATCAAAAACCCACTTGTCAG
TTCAGTAAAATAATTTGGTCAAACAACAGTCTATTGCATTGATTTATAAATAGTTGTCAGTTCACATAGCAATTTAATCAAGTAATCATT
AATTAGTTACCCCCTATATATAAATATATGTAATCAATTTCTTCAAATAGCTTGCTTACATGATAATCAATTAGCCAACCATGAGTCATT
TAGAATAGTGATAAATAGAATACACAGAATAGTGATGAAATTCAATTTAAAAAATCACGTTAGCCTCCAAACCATTTAATTCAAATGAAC
CCATCAACTGGATGCCAACTCTGGCGAATGTAGGACCTCTGAGTGGCTGTATAATTGTTAATTCAAATGAAATTCATTTAAACAGTTGAC
AAACTGTCATTCAACAATTAGCTCCAGGAAATAACAGTTATTTCATCATAAAACAGTCCCTTCAAACACACAATTGTTCTGCTGAAGAGT
TGTCATCAACAATCCAATGCTCACCTATTCAGTTGCTCTGTGGTCAGTGTGGCTGCATAACAGTGGATTCCATGAAAGGAGTCATTTTAG
TGATGAGCTGCCAGTCCATTCCCAGGCCAGGCTGTCGCTGGCCATCCATTCAGTCGATTCAGTCATAGGCGAATCTGTTCTGCCCGAGGC
TTGTGGTCAAGCAAAAATTCAGCCCTGAAATCAGGCACATCTGTTCGTTGGACTAAACCCACAGGTTAGTTCAGTCAAAGCAGGCAACCC
CCTTGTGGGCACTGACCCTGCCACTGGGGTCATGGCGGTTGTGGCAGCTGGGGAGGTTTGGCCCCAACAGCCCTCCTGTGCCTGCTTCCC
TGTGTGTCGGGGTCCTCCAGGGAGCTGACCCAGAGGTGGAGGCCACGGAGGCAGGGTCTCTGGGGACTGTCGGGGGGTACAGAGGGAGAA
GGCTCTGCAAGAGCTCCCTGGCAATACCCCCTTGTGTAATTGCTTTGTGTGCGACAGGGAGGAAGTTTCAATAAAGCAGCAACAAGCTTC

>In-frame_ENST00000373742_ENST00000294507_TCGA-CD-A48C_PUM1_chr1_31501642_-_LAPTM5_chr1_31212784_length(amino acids)=356AA_start in transcript=0_stop in transcript=1070
MPLPPPGPGPEPIPGCTAPTQSPVGRHVVGVKGVGGMSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQ
ALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQVRSMDELNHDFQALALEGRAMGE
NREKYLLPFLSLQIMDYLLCLLTLLGSYIELPAYLKLASRSRASSSKFPLMTLQLLDFCLSILTLCSSYMEVPTYLNFKSMNHMNYLPSQ

--------------------------------------------------------------

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Fusion Gene PPI Analysis for PUM1-LAPTM5


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for PUM1-LAPTM5


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for PUM1-LAPTM5


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgenePUM1C0004134Ataxia1GENOMICS_ENGLAND
HgenePUM1C0010417Cryptorchidism1GENOMICS_ENGLAND
HgenePUM1C0019193Hepatitis, Toxic1CTD_human
HgenePUM1C0036572Seizures1GENOMICS_ENGLAND
HgenePUM1C0557874Global developmental delay1GENOMICS_ENGLAND
HgenePUM1C0860207Drug-Induced Liver Disease1CTD_human
HgenePUM1C1262760Hepatitis, Drug-Induced1CTD_human
HgenePUM1C3658290Drug-Induced Acute Liver Injury1CTD_human
HgenePUM1C3714756Intellectual Disability1GENOMICS_ENGLAND
HgenePUM1C4025871Abnormality of the face1GENOMICS_ENGLAND
HgenePUM1C4277682Chemical and Drug Induced Liver Injury1CTD_human
HgenePUM1C4279912Chemically-Induced Liver Toxicity1CTD_human
HgenePUM1C4693672SPINOCEREBELLAR ATAXIA 471GENOMICS_ENGLAND;UNIPROT
TgeneLAPTM5C0017661IGA Glomerulonephritis1CTD_human
TgeneLAPTM5C0023893Liver Cirrhosis, Experimental1CTD_human