|
||||||
|
 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:RAD17-SEC24A (FusionGDB2 ID:71239) |
Fusion Gene Summary for RAD17-SEC24A |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: RAD17-SEC24A | Fusion gene ID: 71239 | Hgene | Tgene | Gene symbol | RAD17 | SEC24A | Gene ID | 5884 | 10802 |
| Gene name | RAD17 checkpoint clamp loader component | SEC24 homolog A, COPII coat complex component | |
| Synonyms | CCYC|HRAD17|R24L|RAD17SP|RAD24 | - | |
| Cytomap | 5q13.2 | 5q31.1 | |
| Type of gene | protein-coding | protein-coding | |
| Description | cell cycle checkpoint protein RAD17RAD1 homologRAD17 homologRF-C activator 1 homologRad17-like proteincell cycle checkpoint protein (RAD17) | protein transport protein Sec24ASEC24 family, member ASEC24 related gene family, member ASEC24-related protein A | |
| Modification date | 20200313 | 20200327 | |
| UniProtAcc | . | . | |
| Ensembl transtripts involved in fusion gene | ENST00000361732, ENST00000509734, ENST00000354868, ENST00000521422, ENST00000504177, ENST00000354312, ENST00000345306, ENST00000305138, ENST00000282891, ENST00000358030, ENST00000380774, | ENST00000398844, ENST00000322887, | |
| Fusion gene scores | * DoF score | 3 X 3 X 3=27 | 6 X 7 X 4=168 |
| # samples | 4 | 7 | |
| ** MAII score | log2(4/27*10)=0.567040592723894 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(7/168*10)=-1.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: RAD17 [Title/Abstract] AND SEC24A [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | RAD17(68670538)-SEC24A(134050714), # samples:3 | ||
| Anticipated loss of major functional domain due to fusion event. | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Tgene | SEC24A | GO:0090110 | cargo loading into COPII-coated vesicle | 17499046|18843296 |
| Fusion gene breakpoints across RAD17 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene breakpoints across SEC24A (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | PRAD | TCGA-EJ-5524-01A | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| ChimerDB4 | PRAD | TCGA-EJ-5524 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| ChimerDB4 | PRAD | TCGA-EJ-5524 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| ChimerDB4 | PRAD | TCGA-EJ-5524 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| ChimerDB4 | PRAD | TCGA-EJ-5524-01A | RAD17 | chr5 | 68670538 | - | SEC24A | chr5 | 134050714 | + |
Top |
Fusion Gene ORF analysis for RAD17-SEC24A |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000361732 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| 5CDS-intron | ENST00000361732 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| In-frame | ENST00000509734 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| 5CDS-intron | ENST00000509734 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| In-frame | ENST00000354868 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| 5CDS-intron | ENST00000354868 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| 5UTR-3CDS | ENST00000521422 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| 5UTR-intron | ENST00000521422 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| intron-3CDS | ENST00000504177 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| intron-intron | ENST00000504177 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| In-frame | ENST00000354312 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| 5CDS-intron | ENST00000354312 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| In-frame | ENST00000345306 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| 5CDS-intron | ENST00000345306 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| In-frame | ENST00000305138 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| 5CDS-intron | ENST00000305138 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| In-frame | ENST00000282891 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| 5CDS-intron | ENST00000282891 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| 5UTR-3CDS | ENST00000358030 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| 5UTR-intron | ENST00000358030 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| In-frame | ENST00000380774 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| 5CDS-intron | ENST00000380774 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + |
| In-frame | ENST00000361732 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| 5CDS-intron | ENST00000361732 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| In-frame | ENST00000509734 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| 5CDS-intron | ENST00000509734 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| In-frame | ENST00000354868 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| 5CDS-intron | ENST00000354868 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| 5UTR-3CDS | ENST00000521422 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| 5UTR-intron | ENST00000521422 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| intron-3CDS | ENST00000504177 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| intron-intron | ENST00000504177 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| In-frame | ENST00000354312 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| 5CDS-intron | ENST00000354312 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| In-frame | ENST00000345306 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| 5CDS-intron | ENST00000345306 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| In-frame | ENST00000305138 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| 5CDS-intron | ENST00000305138 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| In-frame | ENST00000282891 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| 5CDS-intron | ENST00000282891 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| 5UTR-3CDS | ENST00000358030 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| 5UTR-intron | ENST00000358030 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| In-frame | ENST00000380774 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| 5CDS-intron | ENST00000380774 | ENST00000322887 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000361732 | RAD17 | chr5 | 68670538 | + | ENST00000398844 | SEC24A | chr5 | 134050714 | + | 4115 | 831 | 480 | 1385 | 301 |
| ENST00000509734 | RAD17 | chr5 | 68670538 | + | ENST00000398844 | SEC24A | chr5 | 134050714 | + | 4346 | 1062 | 636 | 1616 | 326 |
| ENST00000354868 | RAD17 | chr5 | 68670538 | + | ENST00000398844 | SEC24A | chr5 | 134050714 | + | 4173 | 889 | 538 | 1443 | 301 |
| ENST00000354312 | RAD17 | chr5 | 68670538 | + | ENST00000398844 | SEC24A | chr5 | 134050714 | + | 4056 | 772 | 421 | 1326 | 301 |
| ENST00000345306 | RAD17 | chr5 | 68670538 | + | ENST00000398844 | SEC24A | chr5 | 134050714 | + | 3902 | 618 | 267 | 1172 | 301 |
| ENST00000305138 | RAD17 | chr5 | 68670538 | + | ENST00000398844 | SEC24A | chr5 | 134050714 | + | 4277 | 993 | 642 | 1547 | 301 |
| ENST00000282891 | RAD17 | chr5 | 68670538 | + | ENST00000398844 | SEC24A | chr5 | 134050714 | + | 3689 | 405 | 312 | 959 | 215 |
| ENST00000380774 | RAD17 | chr5 | 68670538 | + | ENST00000398844 | SEC24A | chr5 | 134050714 | + | 3730 | 446 | 20 | 1000 | 326 |
| ENST00000361732 | RAD17 | chr5 | 68670538 | + | ENST00000398844 | SEC24A | chr5 | 134050713 | + | 4115 | 831 | 480 | 1385 | 301 |
| ENST00000509734 | RAD17 | chr5 | 68670538 | + | ENST00000398844 | SEC24A | chr5 | 134050713 | + | 4346 | 1062 | 636 | 1616 | 326 |
| ENST00000354868 | RAD17 | chr5 | 68670538 | + | ENST00000398844 | SEC24A | chr5 | 134050713 | + | 4173 | 889 | 538 | 1443 | 301 |
| ENST00000354312 | RAD17 | chr5 | 68670538 | + | ENST00000398844 | SEC24A | chr5 | 134050713 | + | 4056 | 772 | 421 | 1326 | 301 |
| ENST00000345306 | RAD17 | chr5 | 68670538 | + | ENST00000398844 | SEC24A | chr5 | 134050713 | + | 3902 | 618 | 267 | 1172 | 301 |
| ENST00000305138 | RAD17 | chr5 | 68670538 | + | ENST00000398844 | SEC24A | chr5 | 134050713 | + | 4277 | 993 | 642 | 1547 | 301 |
| ENST00000282891 | RAD17 | chr5 | 68670538 | + | ENST00000398844 | SEC24A | chr5 | 134050713 | + | 3689 | 405 | 312 | 959 | 215 |
| ENST00000380774 | RAD17 | chr5 | 68670538 | + | ENST00000398844 | SEC24A | chr5 | 134050713 | + | 3730 | 446 | 20 | 1000 | 326 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000361732 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + | 0.000193572 | 0.99980646 |
| ENST00000509734 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + | 0.000180059 | 0.99981993 |
| ENST00000354868 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + | 0.000182177 | 0.9998179 |
| ENST00000354312 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + | 0.000183584 | 0.9998165 |
| ENST00000345306 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + | 0.000178812 | 0.99982125 |
| ENST00000305138 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + | 0.000182543 | 0.99981743 |
| ENST00000282891 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + | 0.000747469 | 0.9992525 |
| ENST00000380774 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050714 | + | 0.000165693 | 0.9998343 |
| ENST00000361732 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + | 0.000193572 | 0.99980646 |
| ENST00000509734 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + | 0.000180059 | 0.99981993 |
| ENST00000354868 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + | 0.000182177 | 0.9998179 |
| ENST00000354312 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + | 0.000183584 | 0.9998165 |
| ENST00000345306 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + | 0.000178812 | 0.99982125 |
| ENST00000305138 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + | 0.000182543 | 0.99981743 |
| ENST00000282891 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + | 0.000747469 | 0.9992525 |
| ENST00000380774 | ENST00000398844 | RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + | 0.000165693 | 0.9998343 |
Top |
Fusion Genomic Features for RAD17-SEC24A |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + | 3.79E-07 | 0.99999964 |
| RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + | 3.79E-07 | 0.99999964 |
| RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + | 3.79E-07 | 0.99999964 |
| RAD17 | chr5 | 68670538 | + | SEC24A | chr5 | 134050713 | + | 3.79E-07 | 0.99999964 |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
Top |
Fusion Protein Features for RAD17-SEC24A |
| Go to FGviewer for the breakpoints of chr5:68670538-chr5:134050714 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | . |
| FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | SEC24A | chr5:68670538 | chr5:134050713 | ENST00000322887 | 0 | 13 | 89_237 | 0 | 614.0 | Compositional bias | Note=Pro-rich | |
| Tgene | SEC24A | chr5:68670538 | chr5:134050714 | ENST00000322887 | 0 | 13 | 89_237 | 0 | 614.0 | Compositional bias | Note=Pro-rich | |
| Tgene | SEC24A | chr5:68670538 | chr5:134050713 | ENST00000322887 | 0 | 13 | 431_455 | 0 | 614.0 | Region | Note=Zinc finger-like | |
| Tgene | SEC24A | chr5:68670538 | chr5:134050714 | ENST00000322887 | 0 | 13 | 431_455 | 0 | 614.0 | Region | Note=Zinc finger-like | |
| Tgene | SEC24A | chr5:68670538 | chr5:134050713 | ENST00000322887 | 0 | 13 | 966_1038 | 0 | 614.0 | Repeat | Gelsolin-like | |
| Tgene | SEC24A | chr5:68670538 | chr5:134050713 | ENST00000398844 | 17 | 23 | 966_1038 | 909.0 | 1094.0 | Repeat | Gelsolin-like | |
| Tgene | SEC24A | chr5:68670538 | chr5:134050714 | ENST00000322887 | 0 | 13 | 966_1038 | 0 | 614.0 | Repeat | Gelsolin-like | |
| Tgene | SEC24A | chr5:68670538 | chr5:134050714 | ENST00000398844 | 17 | 23 | 966_1038 | 909.0 | 1094.0 | Repeat | Gelsolin-like |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000282891 | + | 3 | 16 | 137_144 | 31.0 | 585.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000305138 | + | 4 | 17 | 137_144 | 117.0 | 671.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000345306 | + | 4 | 17 | 137_144 | 117.0 | 671.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000354312 | + | 5 | 18 | 137_144 | 117.0 | 671.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000354868 | + | 6 | 19 | 137_144 | 117.0 | 671.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000358030 | + | 3 | 16 | 137_144 | 0 | 506.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000361732 | + | 5 | 18 | 137_144 | 117.0 | 671.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000380774 | + | 3 | 16 | 137_144 | 128.0 | 682.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000509734 | + | 5 | 18 | 137_144 | 128.0 | 682.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000521422 | + | 4 | 17 | 137_144 | 0 | 506.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000282891 | + | 3 | 16 | 137_144 | 31.0 | 585.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000305138 | + | 4 | 17 | 137_144 | 117.0 | 671.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000345306 | + | 4 | 17 | 137_144 | 117.0 | 671.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000354312 | + | 5 | 18 | 137_144 | 117.0 | 671.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000354868 | + | 6 | 19 | 137_144 | 117.0 | 671.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000358030 | + | 3 | 16 | 137_144 | 0 | 506.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000361732 | + | 5 | 18 | 137_144 | 117.0 | 671.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000380774 | + | 3 | 16 | 137_144 | 128.0 | 682.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000509734 | + | 5 | 18 | 137_144 | 128.0 | 682.0 | Nucleotide binding | ATP |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000521422 | + | 4 | 17 | 137_144 | 0 | 506.0 | Nucleotide binding | ATP |
| Tgene | SEC24A | chr5:68670538 | chr5:134050713 | ENST00000398844 | 17 | 23 | 89_237 | 909.0 | 1094.0 | Compositional bias | Note=Pro-rich | |
| Tgene | SEC24A | chr5:68670538 | chr5:134050714 | ENST00000398844 | 17 | 23 | 89_237 | 909.0 | 1094.0 | Compositional bias | Note=Pro-rich | |
| Tgene | SEC24A | chr5:68670538 | chr5:134050713 | ENST00000398844 | 17 | 23 | 431_455 | 909.0 | 1094.0 | Region | Note=Zinc finger-like | |
| Tgene | SEC24A | chr5:68670538 | chr5:134050714 | ENST00000398844 | 17 | 23 | 431_455 | 909.0 | 1094.0 | Region | Note=Zinc finger-like |
Top |
Fusion Gene Sequence for RAD17-SEC24A |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >In-frame_ENST00000361732_ENST00000398844_TCGA-EJ-5524-01A_RAD17_chr5_68670538_+_SEC24A_chr5_134050714_length(transcript)=4115nt_BP=831nt GCAACGCCCGCGAGGGTCGGCTCCCGGGGCGCTGACAACCGCCTCGTGGCCCTCGGCCGGCCTCTGAAGAGGGCAGTGAGGGGCCCCCAC CTGGGCGCCCGATGCCCAGAGCACTCTGCGCCCCCAGCCTGCCCCAGCCCAGTCCCTCCCGGCCGCGCGCCCTGACCGCAAGTGAATTCA TGGTATTTTACTTTTTTGGGAAATACTGGAAATGAAGACCTGCAACTGTAATTTGAAATAAGGAAAACTTTAATTTTCAGTATAAAAATT GCTCAAATAGAATTGCCTGATTTTAATGACAAAAGTATATGGGAGTCCACATTTATGTAAGAAATGAAACTATAAAATGTATAAATAATT TGCAAATCAGAATTGCTGTCGAAAGTTTTACTATAATGAAAGATATTTTCATACTCTCAAAAATATAGAGGAAAGGGGCCAAGATTATAG TACCAGTCACAATCTTTTGATGAGGACGAAATGAATCAGGTAACAGACTGGGTTGACCCATCATTTGATGATTTTCTAGAGTGTAGTGGC GTCTCTACTATTACTGCCACATCATTAGGTGTGAATAACTCAAGTCATAGAAGAAAAAATGGGCCTTCTACATTAGAAAGCAGCAGATTT CCAGCGAGAAAAAGAGGAAATCTATCTTCCTTAGAACAGATTTATGGTTTAGAAAATTCAAAAGAATATCTGTCTGAAAATGAACCATGG GTGGATAAATATAAACCAGAAACTCAGCATGAACTTGCTGTGCATAAAAAGAAAATTGAAGAAGTCGAAACCTGGTTAAAAGCTCAAGTT TTAGAAAGGCAACCAAAACAGAAATCATTCCAGACTGGGACAAATGCACGTCTAGATGAACGCATTTTTGCTATGTGTCAAGTGAAAAAC CAGCCCTTGGTTTACCTTATGCTCACAACTCATCCCAGTTTGTATAGAGTTGACAATCTCTCAGATGAGGGAGCACTCAACATCAGTGAT AGAACCATACCTCAGCCCCCCATTCTTCAGCTTTCAGTGGAGAAGCTGAGCAGAGATGGAGCTTTCCTCATGGATGCAGGCTCTGTACTG ATGCTTTGGGTTGGAAAAAATTGTACACAGAATTTTCTCAGCCAAGTTCTAGGAGTTCAAAACTATGCATCAATTCCACAGCCTATGACA GACCTTCCAGAACTTGATACACCAGAATCTGCCAGAATAATAGCTTTCATCTCTTGGCTTAGAGAGCAGAGACCATTTTTCCCAATACTT TATGTAATAAGGGATGAGAGTCCAATGAAAGCAAACTTCCTTCAAAACATGATAGAAGACAGAACAGAATCTGCATTATCATATTATGAA TTCCTGTTGCATATACAGCAACAAGTGAATAAATGAATGAATGAAGAAATTTGACTTATTTTTAAGGAATGTCACGATAGTGCAGAATAC CTGGAAATGTGTAATACCTTCTTTTTCTATTATGTTTGTGGACTAATGTGATGATTGAGATGTTCTCACTGTGATTTCAACAACCTATAG CAAATAAAAGACCACAGCAGAGAATCAAACATGCAACTCTGAAATACTGTATTTTTCAAATCAGAATATAGCTACGTATGATTGGATACT TTTTTCTTGCCAATTATGTTTGAGTTGTTATGGATTAAAATAAGAATATTGCAGAGGCAAAGTACATTTTGTAAAATAAAGATTTCTGTG TTCTACATGTATATTTCTCATTTTTAATTTTTCTGAATCTTTGGCTGCTACATTTAAAACCTCACAAACCTAAGTGTTGCAGGGAAGTTA CAAATTGATTGGTAGTGATGTTTTTAAAATAAAAACAATGGAAAGTAAATATAATGTAGGAAAACTAGAATTCATTCCCCACACGTGTCT TTTTTTTTTCTTTGTTAAGGGAAAGGATCATGTTGACTAAAACTAAACTAATTCTAGTATAGCTTGAGAAAAATATGAAGAAACACATTC AAGCTTTAAAATCTGTCAGTATTCTTTATGCTTGAAGAACAAAGTCACTTTGATTTGAAGTGAGAACTATCATTAGGTGGTTTTCTGATT TCCTGATGAAGAGTTGGACATACTGTCTTAATCTATAGTGAAAAGAATTTGAGCTGTCTTCATAAACACTGGGACTAGCAATGATAATAG GGAGATAAGAAACTTTAATTATCTTGATCCTTTAAGTGGATTTTATTTGGTGCATTTCTGCTCTGGGTATATAATAAAAGTGGGGGTTTT TGGTGAAATGAGTGAAGAAATGAAAGGTTTCTAAAGTGCTATCCAAATACATCAGTAACATTTTTCTAAGGAGTTTAATTGTTAAATTGG AAGTCATTCATAAGAAATATTTATGCTTGAATATGAAAATCTATGAAAGCATAAATGCTGCTGTTTGATTTGGTGGATATTAAGATTATA CACATCCAACATATTAAAGTTATGAAAGAAACTTGACTTCTGAAAATCCTTAAGAGACTGCTTTCTTGATTCAGCTAGAGAAATATTATA GTCAAAACTATTGAGTGAATTTTGTTTACAAATAGGTAAATTATACATTTGTATATTTAAAGTGCTGTGACATAGTATCTTTAAGAGTTT GGCTCAGTTTTCACAGATTCATTTTGTCTTAAGAATTTCTTAAATATGTTCATGTATAATACTTGATCAAAATATTTTTGGGTTTTTTGT TTTGTTTTAATGGGTTAGAAAATGTTTACAATCTTGGTCTTATATGATCACCAATGGAATAGTAACTTCCAGGTTTATATCAATATGAGC TGACTTTAACTGAGTTGTTTGGGATAGGGAAGAAGCAGTCCCTCTACAGTATACAACTACTGCTTGCCAGCTGGATCAAAATAATCATGT TTTATGAAAATATCTCCCTTAAGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTTTCTTGAAAGCTGCTT CATCTATTAAGAAGCAATTTTCAAATTGTAGCGAATTATATTATCCCCTCTTTTAAAGAAACAGTCGTTATATGCTGATGTTTCTTAAAA TAACTAAAATGTTCCTCTTAATGTGATTTTAAATGGAGTTATTTGTAGGTCCTTTCTTAGTAGTAAAGAATCTTCTAGAGGGAAACATTT GTGCTTTTAGGGATAATCTTCCTTGTGCCTCACTACATCCCTAAGTGGGTATGACTCTTGTTATTACCACATGCTTTTTTAGTATATTTC ACAAATTTACTTTTAAATATTATTTTAGATACGGTGTAACATGTGCAATTCAGAATAATTTTATAACAGGTCATGAAAAACATAACTTTA GTTAGGATTCACAATATTTGTTCTCCACATAATGAGAGAATGAATGAGCCTTTGGAGATACTGATATAAGGCAATTATTTTTTGCAATGT TGAATGTGTTTTTTAGTTTGATTCTTTTTTTTTCCCCCAATAGGGCACTACCTGCCATATCATCTTGTATTACTTTTTGATGTAAAGCGA CTAATATTTACACTATGCCATATTTTTTTTAATTATAGTTGTAAATTATGAAAGATCCTTGAATTTTCTACAGATCTACAACTACTAATG TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATAAAAAGTACTCTATTTTTCTAATTTCTAGGATTTTTA AAATAACATTTCTGTAAGTCTGACATACTAATAGTCACTCAAGCAGTACCATTTATTTTAGTTTGCATATATTTTCACTGTTTTTAATTT AATGTATTGAGTCTAATAGACTGTTTTGCAATAATTAGAATAAAGATTTATTTCTTCTAATCAAAGATGCATAACAGCTATTATCTAGGG GACCACCAAATGTGATTTCAAAATTTTGTTAACTATTACAAATGTAATCCTTATATAGAAATTTTAATTTTGTAAAGTAGTGTATAATAT TGTAATATTAAATTCTTGTTCTTAAATTCAAATATGTATTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACA >In-frame_ENST00000361732_ENST00000398844_TCGA-EJ-5524-01A_RAD17_chr5_68670538_+_SEC24A_chr5_134050714_length(amino acids)=301AA_start in transcript=480_stop in transcript=1385 MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQH ELAVHKKKIEEVETWLKAQVLERQPKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQ LSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMK -------------------------------------------------------------- >In-frame_ENST00000509734_ENST00000398844_TCGA-EJ-5524-01A_RAD17_chr5_68670538_+_SEC24A_chr5_134050714_length(transcript)=4346nt_BP=1062nt CCCCGGGAGGCCGTACCTCCGAGAGGCTCGGCGTTGAGCCCGGGTAGGGCCAGGTGGCTGCCCTTTCACCTAGGGTAGTCCCTGGTCGCC TCCGCTCTTCGCCTAAAAGGGGATGCAGCTCCGGGAAAGTAAGGCCGCCGCGGTTGCGGCTATATTATGTATATGTCTTAGAGACGTGAG TCTATCTCTGCCTTCAAGCTTTCCTGGGCTCTCGTCGCTCCTCCTCCCGACCCGCCCATCCCATCTGGGGATGAGAAGATTGAGGGTGCA GAGCCCTGTCCTGCAGCGGGGATTTGCGAGCTCAACCCGGCACCCCACTGATTACAGGATTACGTTGGACGAATATTTGAGCTTAGTATT CCCTGTTCACTGTGTGGGGTGGTGGTGGGTCGGCTAGGAATAGTCTTGAAGGTCTACCTCTGACATCTCATTTCAGTAACCTCGCATCTT CAGGGACAGTTATCTGCTTTTTAAAGGAGCAAGTGAATTCATGGTATTTTACTTTTTTGGGAAATACTGGAAATGAAGACCTGCAACTGT AATTTGAAATAAGGAAAACTTTAATTTTCAGTATAAAAATTGCTCAAATAGAATTGCCTGATTTTAATGACAAAAGGTGAATTATAGTTT AATGTACTGCAAGTCCTAAACTACGGATGGGAACTATTACAGTTTATAATGTCAAAAACTTTTCTTAGACCAAAGGTATCTTCCACAAAG GTAACAGACTGGGTTGACCCATCATTTGATGATTTTCTAGAGTGTAGTGGCGTCTCTACTATTACTGCCACATCATTAGGTGTGAATAAC TCAAGTCATAGAAGAAAAAATGGGCCTTCTACATTAGAAAGCAGCAGATTTCCAGCGAGAAAAAGAGGAAATCTATCTTCCTTAGAACAG ATTTATGGTTTAGAAAATTCAAAAGAATATCTGTCTGAAAATGAACCATGGGTGGATAAATATAAACCAGAAACTCAGCATGAACTTGCT GTGCATAAAAAGAAAATTGAAGAAGTCGAAACCTGGTTAAAAGCTCAAGTTTTAGAAAGGCAACCAAAACAGAAATCATTCCAGACTGGG ACAAATGCACGTCTAGATGAACGCATTTTTGCTATGTGTCAAGTGAAAAACCAGCCCTTGGTTTACCTTATGCTCACAACTCATCCCAGT TTGTATAGAGTTGACAATCTCTCAGATGAGGGAGCACTCAACATCAGTGATAGAACCATACCTCAGCCCCCCATTCTTCAGCTTTCAGTG GAGAAGCTGAGCAGAGATGGAGCTTTCCTCATGGATGCAGGCTCTGTACTGATGCTTTGGGTTGGAAAAAATTGTACACAGAATTTTCTC AGCCAAGTTCTAGGAGTTCAAAACTATGCATCAATTCCACAGCCTATGACAGACCTTCCAGAACTTGATACACCAGAATCTGCCAGAATA ATAGCTTTCATCTCTTGGCTTAGAGAGCAGAGACCATTTTTCCCAATACTTTATGTAATAAGGGATGAGAGTCCAATGAAAGCAAACTTC CTTCAAAACATGATAGAAGACAGAACAGAATCTGCATTATCATATTATGAATTCCTGTTGCATATACAGCAACAAGTGAATAAATGAATG AATGAAGAAATTTGACTTATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTCTTTTTCTATTATGTTTGT GGACTAATGTGATGATTGAGATGTTCTCACTGTGATTTCAACAACCTATAGCAAATAAAAGACCACAGCAGAGAATCAAACATGCAACTC TGAAATACTGTATTTTTCAAATCAGAATATAGCTACGTATGATTGGATACTTTTTTCTTGCCAATTATGTTTGAGTTGTTATGGATTAAA ATAAGAATATTGCAGAGGCAAAGTACATTTTGTAAAATAAAGATTTCTGTGTTCTACATGTATATTTCTCATTTTTAATTTTTCTGAATC TTTGGCTGCTACATTTAAAACCTCACAAACCTAAGTGTTGCAGGGAAGTTACAAATTGATTGGTAGTGATGTTTTTAAAATAAAAACAAT GGAAAGTAAATATAATGTAGGAAAACTAGAATTCATTCCCCACACGTGTCTTTTTTTTTTCTTTGTTAAGGGAAAGGATCATGTTGACTA AAACTAAACTAATTCTAGTATAGCTTGAGAAAAATATGAAGAAACACATTCAAGCTTTAAAATCTGTCAGTATTCTTTATGCTTGAAGAA CAAAGTCACTTTGATTTGAAGTGAGAACTATCATTAGGTGGTTTTCTGATTTCCTGATGAAGAGTTGGACATACTGTCTTAATCTATAGT GAAAAGAATTTGAGCTGTCTTCATAAACACTGGGACTAGCAATGATAATAGGGAGATAAGAAACTTTAATTATCTTGATCCTTTAAGTGG ATTTTATTTGGTGCATTTCTGCTCTGGGTATATAATAAAAGTGGGGGTTTTTGGTGAAATGAGTGAAGAAATGAAAGGTTTCTAAAGTGC TATCCAAATACATCAGTAACATTTTTCTAAGGAGTTTAATTGTTAAATTGGAAGTCATTCATAAGAAATATTTATGCTTGAATATGAAAA TCTATGAAAGCATAAATGCTGCTGTTTGATTTGGTGGATATTAAGATTATACACATCCAACATATTAAAGTTATGAAAGAAACTTGACTT CTGAAAATCCTTAAGAGACTGCTTTCTTGATTCAGCTAGAGAAATATTATAGTCAAAACTATTGAGTGAATTTTGTTTACAAATAGGTAA ATTATACATTTGTATATTTAAAGTGCTGTGACATAGTATCTTTAAGAGTTTGGCTCAGTTTTCACAGATTCATTTTGTCTTAAGAATTTC TTAAATATGTTCATGTATAATACTTGATCAAAATATTTTTGGGTTTTTTGTTTTGTTTTAATGGGTTAGAAAATGTTTACAATCTTGGTC TTATATGATCACCAATGGAATAGTAACTTCCAGGTTTATATCAATATGAGCTGACTTTAACTGAGTTGTTTGGGATAGGGAAGAAGCAGT CCCTCTACAGTATACAACTACTGCTTGCCAGCTGGATCAAAATAATCATGTTTTATGAAAATATCTCCCTTAAGCAGTGTTAAGGTTGGT TTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTTTCTTGAAAGCTGCTTCATCTATTAAGAAGCAATTTTCAAATTGTAGCGAATTAT ATTATCCCCTCTTTTAAAGAAACAGTCGTTATATGCTGATGTTTCTTAAAATAACTAAAATGTTCCTCTTAATGTGATTTTAAATGGAGT TATTTGTAGGTCCTTTCTTAGTAGTAAAGAATCTTCTAGAGGGAAACATTTGTGCTTTTAGGGATAATCTTCCTTGTGCCTCACTACATC CCTAAGTGGGTATGACTCTTGTTATTACCACATGCTTTTTTAGTATATTTCACAAATTTACTTTTAAATATTATTTTAGATACGGTGTAA CATGTGCAATTCAGAATAATTTTATAACAGGTCATGAAAAACATAACTTTAGTTAGGATTCACAATATTTGTTCTCCACATAATGAGAGA ATGAATGAGCCTTTGGAGATACTGATATAAGGCAATTATTTTTTGCAATGTTGAATGTGTTTTTTAGTTTGATTCTTTTTTTTTCCCCCA ATAGGGCACTACCTGCCATATCATCTTGTATTACTTTTTGATGTAAAGCGACTAATATTTACACTATGCCATATTTTTTTTAATTATAGT TGTAAATTATGAAAGATCCTTGAATTTTCTACAGATCTACAACTACTAATGTAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCAT GGCAGTTCTACCATAAAAAGTACTCTATTTTTCTAATTTCTAGGATTTTTAAAATAACATTTCTGTAAGTCTGACATACTAATAGTCACT CAAGCAGTACCATTTATTTTAGTTTGCATATATTTTCACTGTTTTTAATTTAATGTATTGAGTCTAATAGACTGTTTTGCAATAATTAGA ATAAAGATTTATTTCTTCTAATCAAAGATGCATAACAGCTATTATCTAGGGGACCACCAAATGTGATTTCAAAATTTTGTTAACTATTAC AAATGTAATCCTTATATAGAAATTTTAATTTTGTAAAGTAGTGTATAATATTGTAATATTAAATTCTTGTTCTTAAATTCAAATATGTAT TGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAGATTTGTCTTCCTTTTTACAGTTTGTAATTTTCACTGT >In-frame_ENST00000509734_ENST00000398844_TCGA-EJ-5524-01A_RAD17_chr5_68670538_+_SEC24A_chr5_134050714_length(amino acids)=326AA_start in transcript=636_stop in transcript=1616 MQVLNYGWELLQFIMSKTFLRPKVSSTKVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLEQIY GLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLY RVDNLSDEGALNISDRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIA -------------------------------------------------------------- >In-frame_ENST00000354868_ENST00000398844_TCGA-EJ-5524-01A_RAD17_chr5_68670538_+_SEC24A_chr5_134050714_length(transcript)=4173nt_BP=889nt GAGGCCGTACCTCCGAGAGGCTCGGCGTTGAGCCCGGGTAGGGCCAGGTGGCTGCCCTTTCACCTAGGGTAGTCCCTGGTCGCCTCCGCT CTTCGCCTAAAAGGGGATGCAGCTCCGGGAAACAAGTGAATTCATGGTATTTTACTTTTTTGGGAAATACTGGAAATGAAGACCTGCAAC TGTAATTTGAAATAAGGAAAACTTTAATTTTCAGTATAAAAATTGCTCAAATAGAATTGCCTGATTTTAATGACAAAAGGTGAATTATAG TTTAATGTACTGCAAGTCCTAAACTACGGATGGGAACTATTACAGTTTATAATGTCAAAAACTTTTCTTAGACCAAAGGTATCTTCCACA AAGTATATGGGAGTCCACATTTATGTAAGAAATGAAACTATAAAATGTATAAATAATTTGCAAATCAGAATTGCTGTCGAAAGTTTTACT ATAATGAAAGATATTTTCATACTCTCAAAAATATAGAGGAAAGGGGCCAAGATTATAGTACCAGTCACAATCTTTTGATGAGGACGAAAT GAATCAGGTAACAGACTGGGTTGACCCATCATTTGATGATTTTCTAGAGTGTAGTGGCGTCTCTACTATTACTGCCACATCATTAGGTGT GAATAACTCAAGTCATAGAAGAAAAAATGGGCCTTCTACATTAGAAAGCAGCAGATTTCCAGCGAGAAAAAGAGGAAATCTATCTTCCTT AGAACAGATTTATGGTTTAGAAAATTCAAAAGAATATCTGTCTGAAAATGAACCATGGGTGGATAAATATAAACCAGAAACTCAGCATGA ACTTGCTGTGCATAAAAAGAAAATTGAAGAAGTCGAAACCTGGTTAAAAGCTCAAGTTTTAGAAAGGCAACCAAAACAGAAATCATTCCA GACTGGGACAAATGCACGTCTAGATGAACGCATTTTTGCTATGTGTCAAGTGAAAAACCAGCCCTTGGTTTACCTTATGCTCACAACTCA TCCCAGTTTGTATAGAGTTGACAATCTCTCAGATGAGGGAGCACTCAACATCAGTGATAGAACCATACCTCAGCCCCCCATTCTTCAGCT TTCAGTGGAGAAGCTGAGCAGAGATGGAGCTTTCCTCATGGATGCAGGCTCTGTACTGATGCTTTGGGTTGGAAAAAATTGTACACAGAA TTTTCTCAGCCAAGTTCTAGGAGTTCAAAACTATGCATCAATTCCACAGCCTATGACAGACCTTCCAGAACTTGATACACCAGAATCTGC CAGAATAATAGCTTTCATCTCTTGGCTTAGAGAGCAGAGACCATTTTTCCCAATACTTTATGTAATAAGGGATGAGAGTCCAATGAAAGC AAACTTCCTTCAAAACATGATAGAAGACAGAACAGAATCTGCATTATCATATTATGAATTCCTGTTGCATATACAGCAACAAGTGAATAA ATGAATGAATGAAGAAATTTGACTTATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTCTTTTTCTATTA TGTTTGTGGACTAATGTGATGATTGAGATGTTCTCACTGTGATTTCAACAACCTATAGCAAATAAAAGACCACAGCAGAGAATCAAACAT GCAACTCTGAAATACTGTATTTTTCAAATCAGAATATAGCTACGTATGATTGGATACTTTTTTCTTGCCAATTATGTTTGAGTTGTTATG GATTAAAATAAGAATATTGCAGAGGCAAAGTACATTTTGTAAAATAAAGATTTCTGTGTTCTACATGTATATTTCTCATTTTTAATTTTT CTGAATCTTTGGCTGCTACATTTAAAACCTCACAAACCTAAGTGTTGCAGGGAAGTTACAAATTGATTGGTAGTGATGTTTTTAAAATAA AAACAATGGAAAGTAAATATAATGTAGGAAAACTAGAATTCATTCCCCACACGTGTCTTTTTTTTTTCTTTGTTAAGGGAAAGGATCATG TTGACTAAAACTAAACTAATTCTAGTATAGCTTGAGAAAAATATGAAGAAACACATTCAAGCTTTAAAATCTGTCAGTATTCTTTATGCT TGAAGAACAAAGTCACTTTGATTTGAAGTGAGAACTATCATTAGGTGGTTTTCTGATTTCCTGATGAAGAGTTGGACATACTGTCTTAAT CTATAGTGAAAAGAATTTGAGCTGTCTTCATAAACACTGGGACTAGCAATGATAATAGGGAGATAAGAAACTTTAATTATCTTGATCCTT TAAGTGGATTTTATTTGGTGCATTTCTGCTCTGGGTATATAATAAAAGTGGGGGTTTTTGGTGAAATGAGTGAAGAAATGAAAGGTTTCT AAAGTGCTATCCAAATACATCAGTAACATTTTTCTAAGGAGTTTAATTGTTAAATTGGAAGTCATTCATAAGAAATATTTATGCTTGAAT ATGAAAATCTATGAAAGCATAAATGCTGCTGTTTGATTTGGTGGATATTAAGATTATACACATCCAACATATTAAAGTTATGAAAGAAAC TTGACTTCTGAAAATCCTTAAGAGACTGCTTTCTTGATTCAGCTAGAGAAATATTATAGTCAAAACTATTGAGTGAATTTTGTTTACAAA TAGGTAAATTATACATTTGTATATTTAAAGTGCTGTGACATAGTATCTTTAAGAGTTTGGCTCAGTTTTCACAGATTCATTTTGTCTTAA GAATTTCTTAAATATGTTCATGTATAATACTTGATCAAAATATTTTTGGGTTTTTTGTTTTGTTTTAATGGGTTAGAAAATGTTTACAAT CTTGGTCTTATATGATCACCAATGGAATAGTAACTTCCAGGTTTATATCAATATGAGCTGACTTTAACTGAGTTGTTTGGGATAGGGAAG AAGCAGTCCCTCTACAGTATACAACTACTGCTTGCCAGCTGGATCAAAATAATCATGTTTTATGAAAATATCTCCCTTAAGCAGTGTTAA GGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTTTCTTGAAAGCTGCTTCATCTATTAAGAAGCAATTTTCAAATTGTAGC GAATTATATTATCCCCTCTTTTAAAGAAACAGTCGTTATATGCTGATGTTTCTTAAAATAACTAAAATGTTCCTCTTAATGTGATTTTAA ATGGAGTTATTTGTAGGTCCTTTCTTAGTAGTAAAGAATCTTCTAGAGGGAAACATTTGTGCTTTTAGGGATAATCTTCCTTGTGCCTCA CTACATCCCTAAGTGGGTATGACTCTTGTTATTACCACATGCTTTTTTAGTATATTTCACAAATTTACTTTTAAATATTATTTTAGATAC GGTGTAACATGTGCAATTCAGAATAATTTTATAACAGGTCATGAAAAACATAACTTTAGTTAGGATTCACAATATTTGTTCTCCACATAA TGAGAGAATGAATGAGCCTTTGGAGATACTGATATAAGGCAATTATTTTTTGCAATGTTGAATGTGTTTTTTAGTTTGATTCTTTTTTTT TCCCCCAATAGGGCACTACCTGCCATATCATCTTGTATTACTTTTTGATGTAAAGCGACTAATATTTACACTATGCCATATTTTTTTTAA TTATAGTTGTAAATTATGAAAGATCCTTGAATTTTCTACAGATCTACAACTACTAATGTAACAGACAAGGGCAATCTTGGTATTTAAATC TGAGCATGGCAGTTCTACCATAAAAAGTACTCTATTTTTCTAATTTCTAGGATTTTTAAAATAACATTTCTGTAAGTCTGACATACTAAT AGTCACTCAAGCAGTACCATTTATTTTAGTTTGCATATATTTTCACTGTTTTTAATTTAATGTATTGAGTCTAATAGACTGTTTTGCAAT AATTAGAATAAAGATTTATTTCTTCTAATCAAAGATGCATAACAGCTATTATCTAGGGGACCACCAAATGTGATTTCAAAATTTTGTTAA CTATTACAAATGTAATCCTTATATAGAAATTTTAATTTTGTAAAGTAGTGTATAATATTGTAATATTAAATTCTTGTTCTTAAATTCAAA TATGTATTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAGATTTGTCTTCCTTTTTACAGTTTGTAATTT >In-frame_ENST00000354868_ENST00000398844_TCGA-EJ-5524-01A_RAD17_chr5_68670538_+_SEC24A_chr5_134050714_length(amino acids)=301AA_start in transcript=538_stop in transcript=1443 MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQH ELAVHKKKIEEVETWLKAQVLERQPKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQ LSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMK -------------------------------------------------------------- >In-frame_ENST00000354312_ENST00000398844_TCGA-EJ-5524-01A_RAD17_chr5_68670538_+_SEC24A_chr5_134050714_length(transcript)=4056nt_BP=772nt CGAGAGGCTCGGCGTTGAGCCCGGGTAGGGCCAGGTGGCTGCCCTTTCACCTAGGGTAGTCCCTGGTCGCCTCCGCTCTTCGCCTAAAAG GGGATGCAGCTCCGGGAAACAAGTGAATTCATGGTATTTTACTTTTTTGGGAAATACTGGAAATGAAGACCTGCAACTGTAATTTGAAAT AAGGAAAACTTTAATTTTCAGTATAAAAATTGCTCAAATAGAATTGCCTGATTTTAATGACAAAAGTATATGGGAGTCCACATTTATGTA AGAAATGAAACTATAAAATGTATAAATAATTTGCAAATCAGAATTGCTGTCGAAAGTTTTACTATAATGAAAGATATTTTCATACTCTCA AAAATATAGAGGAAAGGGGCCAAGATTATAGTACCAGTCACAATCTTTTGATGAGGACGAAATGAATCAGGTAACAGACTGGGTTGACCC ATCATTTGATGATTTTCTAGAGTGTAGTGGCGTCTCTACTATTACTGCCACATCATTAGGTGTGAATAACTCAAGTCATAGAAGAAAAAA TGGGCCTTCTACATTAGAAAGCAGCAGATTTCCAGCGAGAAAAAGAGGAAATCTATCTTCCTTAGAACAGATTTATGGTTTAGAAAATTC AAAAGAATATCTGTCTGAAAATGAACCATGGGTGGATAAATATAAACCAGAAACTCAGCATGAACTTGCTGTGCATAAAAAGAAAATTGA AGAAGTCGAAACCTGGTTAAAAGCTCAAGTTTTAGAAAGGCAACCAAAACAGAAATCATTCCAGACTGGGACAAATGCACGTCTAGATGA ACGCATTTTTGCTATGTGTCAAGTGAAAAACCAGCCCTTGGTTTACCTTATGCTCACAACTCATCCCAGTTTGTATAGAGTTGACAATCT CTCAGATGAGGGAGCACTCAACATCAGTGATAGAACCATACCTCAGCCCCCCATTCTTCAGCTTTCAGTGGAGAAGCTGAGCAGAGATGG AGCTTTCCTCATGGATGCAGGCTCTGTACTGATGCTTTGGGTTGGAAAAAATTGTACACAGAATTTTCTCAGCCAAGTTCTAGGAGTTCA AAACTATGCATCAATTCCACAGCCTATGACAGACCTTCCAGAACTTGATACACCAGAATCTGCCAGAATAATAGCTTTCATCTCTTGGCT TAGAGAGCAGAGACCATTTTTCCCAATACTTTATGTAATAAGGGATGAGAGTCCAATGAAAGCAAACTTCCTTCAAAACATGATAGAAGA CAGAACAGAATCTGCATTATCATATTATGAATTCCTGTTGCATATACAGCAACAAGTGAATAAATGAATGAATGAAGAAATTTGACTTAT TTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTCTTTTTCTATTATGTTTGTGGACTAATGTGATGATTGAG ATGTTCTCACTGTGATTTCAACAACCTATAGCAAATAAAAGACCACAGCAGAGAATCAAACATGCAACTCTGAAATACTGTATTTTTCAA ATCAGAATATAGCTACGTATGATTGGATACTTTTTTCTTGCCAATTATGTTTGAGTTGTTATGGATTAAAATAAGAATATTGCAGAGGCA AAGTACATTTTGTAAAATAAAGATTTCTGTGTTCTACATGTATATTTCTCATTTTTAATTTTTCTGAATCTTTGGCTGCTACATTTAAAA CCTCACAAACCTAAGTGTTGCAGGGAAGTTACAAATTGATTGGTAGTGATGTTTTTAAAATAAAAACAATGGAAAGTAAATATAATGTAG GAAAACTAGAATTCATTCCCCACACGTGTCTTTTTTTTTTCTTTGTTAAGGGAAAGGATCATGTTGACTAAAACTAAACTAATTCTAGTA TAGCTTGAGAAAAATATGAAGAAACACATTCAAGCTTTAAAATCTGTCAGTATTCTTTATGCTTGAAGAACAAAGTCACTTTGATTTGAA GTGAGAACTATCATTAGGTGGTTTTCTGATTTCCTGATGAAGAGTTGGACATACTGTCTTAATCTATAGTGAAAAGAATTTGAGCTGTCT TCATAAACACTGGGACTAGCAATGATAATAGGGAGATAAGAAACTTTAATTATCTTGATCCTTTAAGTGGATTTTATTTGGTGCATTTCT GCTCTGGGTATATAATAAAAGTGGGGGTTTTTGGTGAAATGAGTGAAGAAATGAAAGGTTTCTAAAGTGCTATCCAAATACATCAGTAAC ATTTTTCTAAGGAGTTTAATTGTTAAATTGGAAGTCATTCATAAGAAATATTTATGCTTGAATATGAAAATCTATGAAAGCATAAATGCT GCTGTTTGATTTGGTGGATATTAAGATTATACACATCCAACATATTAAAGTTATGAAAGAAACTTGACTTCTGAAAATCCTTAAGAGACT GCTTTCTTGATTCAGCTAGAGAAATATTATAGTCAAAACTATTGAGTGAATTTTGTTTACAAATAGGTAAATTATACATTTGTATATTTA AAGTGCTGTGACATAGTATCTTTAAGAGTTTGGCTCAGTTTTCACAGATTCATTTTGTCTTAAGAATTTCTTAAATATGTTCATGTATAA TACTTGATCAAAATATTTTTGGGTTTTTTGTTTTGTTTTAATGGGTTAGAAAATGTTTACAATCTTGGTCTTATATGATCACCAATGGAA TAGTAACTTCCAGGTTTATATCAATATGAGCTGACTTTAACTGAGTTGTTTGGGATAGGGAAGAAGCAGTCCCTCTACAGTATACAACTA CTGCTTGCCAGCTGGATCAAAATAATCATGTTTTATGAAAATATCTCCCTTAAGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCAC ATTGAACTGGAAGTTTTCTTGAAAGCTGCTTCATCTATTAAGAAGCAATTTTCAAATTGTAGCGAATTATATTATCCCCTCTTTTAAAGA AACAGTCGTTATATGCTGATGTTTCTTAAAATAACTAAAATGTTCCTCTTAATGTGATTTTAAATGGAGTTATTTGTAGGTCCTTTCTTA GTAGTAAAGAATCTTCTAGAGGGAAACATTTGTGCTTTTAGGGATAATCTTCCTTGTGCCTCACTACATCCCTAAGTGGGTATGACTCTT GTTATTACCACATGCTTTTTTAGTATATTTCACAAATTTACTTTTAAATATTATTTTAGATACGGTGTAACATGTGCAATTCAGAATAAT TTTATAACAGGTCATGAAAAACATAACTTTAGTTAGGATTCACAATATTTGTTCTCCACATAATGAGAGAATGAATGAGCCTTTGGAGAT ACTGATATAAGGCAATTATTTTTTGCAATGTTGAATGTGTTTTTTAGTTTGATTCTTTTTTTTTCCCCCAATAGGGCACTACCTGCCATA TCATCTTGTATTACTTTTTGATGTAAAGCGACTAATATTTACACTATGCCATATTTTTTTTAATTATAGTTGTAAATTATGAAAGATCCT TGAATTTTCTACAGATCTACAACTACTAATGTAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATAAAAAG TACTCTATTTTTCTAATTTCTAGGATTTTTAAAATAACATTTCTGTAAGTCTGACATACTAATAGTCACTCAAGCAGTACCATTTATTTT AGTTTGCATATATTTTCACTGTTTTTAATTTAATGTATTGAGTCTAATAGACTGTTTTGCAATAATTAGAATAAAGATTTATTTCTTCTA ATCAAAGATGCATAACAGCTATTATCTAGGGGACCACCAAATGTGATTTCAAAATTTTGTTAACTATTACAAATGTAATCCTTATATAGA AATTTTAATTTTGTAAAGTAGTGTATAATATTGTAATATTAAATTCTTGTTCTTAAATTCAAATATGTATTGATCTTCAATGTGCTGTGT TAAATCTTGCTTCTCTGAAAAGTTGGAGACAAGATTTGTCTTCCTTTTTACAGTTTGTAATTTTCACTGTTTTATTCCTGTTAAAAAAAA >In-frame_ENST00000354312_ENST00000398844_TCGA-EJ-5524-01A_RAD17_chr5_68670538_+_SEC24A_chr5_134050714_length(amino acids)=301AA_start in transcript=421_stop in transcript=1326 MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQH ELAVHKKKIEEVETWLKAQVLERQPKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQ LSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMK -------------------------------------------------------------- >In-frame_ENST00000345306_ENST00000398844_TCGA-EJ-5524-01A_RAD17_chr5_68670538_+_SEC24A_chr5_134050714_length(transcript)=3902nt_BP=618nt AGCCCGGGTAGGGCCAGGTGGCTGCCCTTTCACCTAGGGTAGTCCCTGGTCGCCTCCGCTCTTCGCCTAAAAGGGGATGCAGCTCCGGGA AATATATGGGAGTCCACATTTATGTAAGAAATGAAACTATAAAATGTATAAATAATTTGCAAATCAGAATTGCTGTCGAAAGTTTTACTA TAATGAAAGATATTTTCATACTCTCAAAAATATAGAGGAAAGGGGCCAAGATTATAGTACCAGTCACAATCTTTTGATGAGGACGAAATG AATCAGGTAACAGACTGGGTTGACCCATCATTTGATGATTTTCTAGAGTGTAGTGGCGTCTCTACTATTACTGCCACATCATTAGGTGTG AATAACTCAAGTCATAGAAGAAAAAATGGGCCTTCTACATTAGAAAGCAGCAGATTTCCAGCGAGAAAAAGAGGAAATCTATCTTCCTTA GAACAGATTTATGGTTTAGAAAATTCAAAAGAATATCTGTCTGAAAATGAACCATGGGTGGATAAATATAAACCAGAAACTCAGCATGAA CTTGCTGTGCATAAAAAGAAAATTGAAGAAGTCGAAACCTGGTTAAAAGCTCAAGTTTTAGAAAGGCAACCAAAACAGAAATCATTCCAG ACTGGGACAAATGCACGTCTAGATGAACGCATTTTTGCTATGTGTCAAGTGAAAAACCAGCCCTTGGTTTACCTTATGCTCACAACTCAT CCCAGTTTGTATAGAGTTGACAATCTCTCAGATGAGGGAGCACTCAACATCAGTGATAGAACCATACCTCAGCCCCCCATTCTTCAGCTT TCAGTGGAGAAGCTGAGCAGAGATGGAGCTTTCCTCATGGATGCAGGCTCTGTACTGATGCTTTGGGTTGGAAAAAATTGTACACAGAAT TTTCTCAGCCAAGTTCTAGGAGTTCAAAACTATGCATCAATTCCACAGCCTATGACAGACCTTCCAGAACTTGATACACCAGAATCTGCC AGAATAATAGCTTTCATCTCTTGGCTTAGAGAGCAGAGACCATTTTTCCCAATACTTTATGTAATAAGGGATGAGAGTCCAATGAAAGCA AACTTCCTTCAAAACATGATAGAAGACAGAACAGAATCTGCATTATCATATTATGAATTCCTGTTGCATATACAGCAACAAGTGAATAAA TGAATGAATGAAGAAATTTGACTTATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTCTTTTTCTATTAT GTTTGTGGACTAATGTGATGATTGAGATGTTCTCACTGTGATTTCAACAACCTATAGCAAATAAAAGACCACAGCAGAGAATCAAACATG CAACTCTGAAATACTGTATTTTTCAAATCAGAATATAGCTACGTATGATTGGATACTTTTTTCTTGCCAATTATGTTTGAGTTGTTATGG ATTAAAATAAGAATATTGCAGAGGCAAAGTACATTTTGTAAAATAAAGATTTCTGTGTTCTACATGTATATTTCTCATTTTTAATTTTTC TGAATCTTTGGCTGCTACATTTAAAACCTCACAAACCTAAGTGTTGCAGGGAAGTTACAAATTGATTGGTAGTGATGTTTTTAAAATAAA AACAATGGAAAGTAAATATAATGTAGGAAAACTAGAATTCATTCCCCACACGTGTCTTTTTTTTTTCTTTGTTAAGGGAAAGGATCATGT TGACTAAAACTAAACTAATTCTAGTATAGCTTGAGAAAAATATGAAGAAACACATTCAAGCTTTAAAATCTGTCAGTATTCTTTATGCTT GAAGAACAAAGTCACTTTGATTTGAAGTGAGAACTATCATTAGGTGGTTTTCTGATTTCCTGATGAAGAGTTGGACATACTGTCTTAATC TATAGTGAAAAGAATTTGAGCTGTCTTCATAAACACTGGGACTAGCAATGATAATAGGGAGATAAGAAACTTTAATTATCTTGATCCTTT AAGTGGATTTTATTTGGTGCATTTCTGCTCTGGGTATATAATAAAAGTGGGGGTTTTTGGTGAAATGAGTGAAGAAATGAAAGGTTTCTA AAGTGCTATCCAAATACATCAGTAACATTTTTCTAAGGAGTTTAATTGTTAAATTGGAAGTCATTCATAAGAAATATTTATGCTTGAATA TGAAAATCTATGAAAGCATAAATGCTGCTGTTTGATTTGGTGGATATTAAGATTATACACATCCAACATATTAAAGTTATGAAAGAAACT TGACTTCTGAAAATCCTTAAGAGACTGCTTTCTTGATTCAGCTAGAGAAATATTATAGTCAAAACTATTGAGTGAATTTTGTTTACAAAT AGGTAAATTATACATTTGTATATTTAAAGTGCTGTGACATAGTATCTTTAAGAGTTTGGCTCAGTTTTCACAGATTCATTTTGTCTTAAG AATTTCTTAAATATGTTCATGTATAATACTTGATCAAAATATTTTTGGGTTTTTTGTTTTGTTTTAATGGGTTAGAAAATGTTTACAATC TTGGTCTTATATGATCACCAATGGAATAGTAACTTCCAGGTTTATATCAATATGAGCTGACTTTAACTGAGTTGTTTGGGATAGGGAAGA AGCAGTCCCTCTACAGTATACAACTACTGCTTGCCAGCTGGATCAAAATAATCATGTTTTATGAAAATATCTCCCTTAAGCAGTGTTAAG GTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTTTCTTGAAAGCTGCTTCATCTATTAAGAAGCAATTTTCAAATTGTAGCG AATTATATTATCCCCTCTTTTAAAGAAACAGTCGTTATATGCTGATGTTTCTTAAAATAACTAAAATGTTCCTCTTAATGTGATTTTAAA TGGAGTTATTTGTAGGTCCTTTCTTAGTAGTAAAGAATCTTCTAGAGGGAAACATTTGTGCTTTTAGGGATAATCTTCCTTGTGCCTCAC TACATCCCTAAGTGGGTATGACTCTTGTTATTACCACATGCTTTTTTAGTATATTTCACAAATTTACTTTTAAATATTATTTTAGATACG GTGTAACATGTGCAATTCAGAATAATTTTATAACAGGTCATGAAAAACATAACTTTAGTTAGGATTCACAATATTTGTTCTCCACATAAT GAGAGAATGAATGAGCCTTTGGAGATACTGATATAAGGCAATTATTTTTTGCAATGTTGAATGTGTTTTTTAGTTTGATTCTTTTTTTTT CCCCCAATAGGGCACTACCTGCCATATCATCTTGTATTACTTTTTGATGTAAAGCGACTAATATTTACACTATGCCATATTTTTTTTAAT TATAGTTGTAAATTATGAAAGATCCTTGAATTTTCTACAGATCTACAACTACTAATGTAACAGACAAGGGCAATCTTGGTATTTAAATCT GAGCATGGCAGTTCTACCATAAAAAGTACTCTATTTTTCTAATTTCTAGGATTTTTAAAATAACATTTCTGTAAGTCTGACATACTAATA GTCACTCAAGCAGTACCATTTATTTTAGTTTGCATATATTTTCACTGTTTTTAATTTAATGTATTGAGTCTAATAGACTGTTTTGCAATA ATTAGAATAAAGATTTATTTCTTCTAATCAAAGATGCATAACAGCTATTATCTAGGGGACCACCAAATGTGATTTCAAAATTTTGTTAAC TATTACAAATGTAATCCTTATATAGAAATTTTAATTTTGTAAAGTAGTGTATAATATTGTAATATTAAATTCTTGTTCTTAAATTCAAAT ATGTATTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAGATTTGTCTTCCTTTTTACAGTTTGTAATTTT >In-frame_ENST00000345306_ENST00000398844_TCGA-EJ-5524-01A_RAD17_chr5_68670538_+_SEC24A_chr5_134050714_length(amino acids)=301AA_start in transcript=267_stop in transcript=1172 MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQH ELAVHKKKIEEVETWLKAQVLERQPKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQ LSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMK -------------------------------------------------------------- >In-frame_ENST00000305138_ENST00000398844_TCGA-EJ-5524-01A_RAD17_chr5_68670538_+_SEC24A_chr5_134050714_length(transcript)=4277nt_BP=993nt ACCTGTATACCTTTTGAAACGTCACAGTCTCTAATCGTGAACGATTTGGGGCGGAGGGCTGAACAATGTGTTTTCTAGTGTGTCGAGGTG TTTATAGGCTATGTGTGCCTCCAAACTGTAAAGTAGTCCAGTATACTTTCCAATGTATAAGTTTGTAGACCTTAAACTTTTCTTCTGGCT AACTTAAAATCGTTGAATTCACTAGTTTGCATAAACATTTAAGAATTTGAAAACACGGTTGAAAAACAGTGTTACCAAGAAATTTTGTAA TAACATGTTCAAATGAAGACAAAAATTTTACAGTTTAAGACTTAAATTCTTCGTCCACAGCAAGTGAATTCATGGTATTTTACTTTTTTG GGAAATACTGGAAATGAAGACCTGCAACTGTAATTTGAAATAAGGAAAACTTTAATTTTCAGTATAAAAATTGCTCAAATAGAATTGCCT GATTTTAATGACAAAAGTATATGGGAGTCCACATTTATGTAAGAAATGAAACTATAAAATGTATAAATAATTTGCAAATCAGAATTGCTG TCGAAAGTTTTACTATAATGAAAGATATTTTCATACTCTCAAAAATATAGAGGAAAGGGGCCAAGATTATAGTACCAGTCACAATCTTTT GATGAGGACGAAATGAATCAGGTAACAGACTGGGTTGACCCATCATTTGATGATTTTCTAGAGTGTAGTGGCGTCTCTACTATTACTGCC ACATCATTAGGTGTGAATAACTCAAGTCATAGAAGAAAAAATGGGCCTTCTACATTAGAAAGCAGCAGATTTCCAGCGAGAAAAAGAGGA AATCTATCTTCCTTAGAACAGATTTATGGTTTAGAAAATTCAAAAGAATATCTGTCTGAAAATGAACCATGGGTGGATAAATATAAACCA GAAACTCAGCATGAACTTGCTGTGCATAAAAAGAAAATTGAAGAAGTCGAAACCTGGTTAAAAGCTCAAGTTTTAGAAAGGCAACCAAAA CAGAAATCATTCCAGACTGGGACAAATGCACGTCTAGATGAACGCATTTTTGCTATGTGTCAAGTGAAAAACCAGCCCTTGGTTTACCTT ATGCTCACAACTCATCCCAGTTTGTATAGAGTTGACAATCTCTCAGATGAGGGAGCACTCAACATCAGTGATAGAACCATACCTCAGCCC CCCATTCTTCAGCTTTCAGTGGAGAAGCTGAGCAGAGATGGAGCTTTCCTCATGGATGCAGGCTCTGTACTGATGCTTTGGGTTGGAAAA AATTGTACACAGAATTTTCTCAGCCAAGTTCTAGGAGTTCAAAACTATGCATCAATTCCACAGCCTATGACAGACCTTCCAGAACTTGAT ACACCAGAATCTGCCAGAATAATAGCTTTCATCTCTTGGCTTAGAGAGCAGAGACCATTTTTCCCAATACTTTATGTAATAAGGGATGAG AGTCCAATGAAAGCAAACTTCCTTCAAAACATGATAGAAGACAGAACAGAATCTGCATTATCATATTATGAATTCCTGTTGCATATACAG CAACAAGTGAATAAATGAATGAATGAAGAAATTTGACTTATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACC TTCTTTTTCTATTATGTTTGTGGACTAATGTGATGATTGAGATGTTCTCACTGTGATTTCAACAACCTATAGCAAATAAAAGACCACAGC AGAGAATCAAACATGCAACTCTGAAATACTGTATTTTTCAAATCAGAATATAGCTACGTATGATTGGATACTTTTTTCTTGCCAATTATG TTTGAGTTGTTATGGATTAAAATAAGAATATTGCAGAGGCAAAGTACATTTTGTAAAATAAAGATTTCTGTGTTCTACATGTATATTTCT CATTTTTAATTTTTCTGAATCTTTGGCTGCTACATTTAAAACCTCACAAACCTAAGTGTTGCAGGGAAGTTACAAATTGATTGGTAGTGA TGTTTTTAAAATAAAAACAATGGAAAGTAAATATAATGTAGGAAAACTAGAATTCATTCCCCACACGTGTCTTTTTTTTTTCTTTGTTAA GGGAAAGGATCATGTTGACTAAAACTAAACTAATTCTAGTATAGCTTGAGAAAAATATGAAGAAACACATTCAAGCTTTAAAATCTGTCA GTATTCTTTATGCTTGAAGAACAAAGTCACTTTGATTTGAAGTGAGAACTATCATTAGGTGGTTTTCTGATTTCCTGATGAAGAGTTGGA CATACTGTCTTAATCTATAGTGAAAAGAATTTGAGCTGTCTTCATAAACACTGGGACTAGCAATGATAATAGGGAGATAAGAAACTTTAA TTATCTTGATCCTTTAAGTGGATTTTATTTGGTGCATTTCTGCTCTGGGTATATAATAAAAGTGGGGGTTTTTGGTGAAATGAGTGAAGA AATGAAAGGTTTCTAAAGTGCTATCCAAATACATCAGTAACATTTTTCTAAGGAGTTTAATTGTTAAATTGGAAGTCATTCATAAGAAAT ATTTATGCTTGAATATGAAAATCTATGAAAGCATAAATGCTGCTGTTTGATTTGGTGGATATTAAGATTATACACATCCAACATATTAAA GTTATGAAAGAAACTTGACTTCTGAAAATCCTTAAGAGACTGCTTTCTTGATTCAGCTAGAGAAATATTATAGTCAAAACTATTGAGTGA ATTTTGTTTACAAATAGGTAAATTATACATTTGTATATTTAAAGTGCTGTGACATAGTATCTTTAAGAGTTTGGCTCAGTTTTCACAGAT TCATTTTGTCTTAAGAATTTCTTAAATATGTTCATGTATAATACTTGATCAAAATATTTTTGGGTTTTTTGTTTTGTTTTAATGGGTTAG AAAATGTTTACAATCTTGGTCTTATATGATCACCAATGGAATAGTAACTTCCAGGTTTATATCAATATGAGCTGACTTTAACTGAGTTGT TTGGGATAGGGAAGAAGCAGTCCCTCTACAGTATACAACTACTGCTTGCCAGCTGGATCAAAATAATCATGTTTTATGAAAATATCTCCC TTAAGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTTTCTTGAAAGCTGCTTCATCTATTAAGAAGCAAT TTTCAAATTGTAGCGAATTATATTATCCCCTCTTTTAAAGAAACAGTCGTTATATGCTGATGTTTCTTAAAATAACTAAAATGTTCCTCT TAATGTGATTTTAAATGGAGTTATTTGTAGGTCCTTTCTTAGTAGTAAAGAATCTTCTAGAGGGAAACATTTGTGCTTTTAGGGATAATC TTCCTTGTGCCTCACTACATCCCTAAGTGGGTATGACTCTTGTTATTACCACATGCTTTTTTAGTATATTTCACAAATTTACTTTTAAAT ATTATTTTAGATACGGTGTAACATGTGCAATTCAGAATAATTTTATAACAGGTCATGAAAAACATAACTTTAGTTAGGATTCACAATATT TGTTCTCCACATAATGAGAGAATGAATGAGCCTTTGGAGATACTGATATAAGGCAATTATTTTTTGCAATGTTGAATGTGTTTTTTAGTT TGATTCTTTTTTTTTCCCCCAATAGGGCACTACCTGCCATATCATCTTGTATTACTTTTTGATGTAAAGCGACTAATATTTACACTATGC CATATTTTTTTTAATTATAGTTGTAAATTATGAAAGATCCTTGAATTTTCTACAGATCTACAACTACTAATGTAACAGACAAGGGCAATC TTGGTATTTAAATCTGAGCATGGCAGTTCTACCATAAAAAGTACTCTATTTTTCTAATTTCTAGGATTTTTAAAATAACATTTCTGTAAG TCTGACATACTAATAGTCACTCAAGCAGTACCATTTATTTTAGTTTGCATATATTTTCACTGTTTTTAATTTAATGTATTGAGTCTAATA GACTGTTTTGCAATAATTAGAATAAAGATTTATTTCTTCTAATCAAAGATGCATAACAGCTATTATCTAGGGGACCACCAAATGTGATTT CAAAATTTTGTTAACTATTACAAATGTAATCCTTATATAGAAATTTTAATTTTGTAAAGTAGTGTATAATATTGTAATATTAAATTCTTG TTCTTAAATTCAAATATGTATTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAGATTTGTCTTCCTTTTT >In-frame_ENST00000305138_ENST00000398844_TCGA-EJ-5524-01A_RAD17_chr5_68670538_+_SEC24A_chr5_134050714_length(amino acids)=301AA_start in transcript=642_stop in transcript=1547 MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQH ELAVHKKKIEEVETWLKAQVLERQPKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQ LSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMK -------------------------------------------------------------- >In-frame_ENST00000282891_ENST00000398844_TCGA-EJ-5524-01A_RAD17_chr5_68670538_+_SEC24A_chr5_134050714_length(transcript)=3689nt_BP=405nt CAAGTGAATTCATGGTATTTTACTTTTTTGGGAAATACTGGAAATGAAGACCTGCAACTGTAATTTGAAATAAGGAAAACTTTAATTTTC AGTATAAAAATTGCTCAAATAGAATTGCCTGATTTTAATGACAAAAGTATATGGGAGTCCACATTTATGTAAGAAATGAAACTATAAAAT GTATAAATAATTTGCAAATCAGAATTGCTGTCGAAAGTTTTACTATAATGAAAGATATTTTCATACTCTCAAAAATATAGAGGAAAGGGG CCAAGATTATAGTACCAGTCACAATCTTTTGATGAGGACGAAATGAATCAGCATGAACTTGCTGTGCATAAAAAGAAAATTGAAGAAGTC GAAACCTGGTTAAAAGCTCAAGTTTTAGAAAGGCAACCAAAACAGAAATCATTCCAGACTGGGACAAATGCACGTCTAGATGAACGCATT TTTGCTATGTGTCAAGTGAAAAACCAGCCCTTGGTTTACCTTATGCTCACAACTCATCCCAGTTTGTATAGAGTTGACAATCTCTCAGAT GAGGGAGCACTCAACATCAGTGATAGAACCATACCTCAGCCCCCCATTCTTCAGCTTTCAGTGGAGAAGCTGAGCAGAGATGGAGCTTTC CTCATGGATGCAGGCTCTGTACTGATGCTTTGGGTTGGAAAAAATTGTACACAGAATTTTCTCAGCCAAGTTCTAGGAGTTCAAAACTAT GCATCAATTCCACAGCCTATGACAGACCTTCCAGAACTTGATACACCAGAATCTGCCAGAATAATAGCTTTCATCTCTTGGCTTAGAGAG CAGAGACCATTTTTCCCAATACTTTATGTAATAAGGGATGAGAGTCCAATGAAAGCAAACTTCCTTCAAAACATGATAGAAGACAGAACA GAATCTGCATTATCATATTATGAATTCCTGTTGCATATACAGCAACAAGTGAATAAATGAATGAATGAAGAAATTTGACTTATTTTTAAG GAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTCTTTTTCTATTATGTTTGTGGACTAATGTGATGATTGAGATGTTCT CACTGTGATTTCAACAACCTATAGCAAATAAAAGACCACAGCAGAGAATCAAACATGCAACTCTGAAATACTGTATTTTTCAAATCAGAA TATAGCTACGTATGATTGGATACTTTTTTCTTGCCAATTATGTTTGAGTTGTTATGGATTAAAATAAGAATATTGCAGAGGCAAAGTACA TTTTGTAAAATAAAGATTTCTGTGTTCTACATGTATATTTCTCATTTTTAATTTTTCTGAATCTTTGGCTGCTACATTTAAAACCTCACA AACCTAAGTGTTGCAGGGAAGTTACAAATTGATTGGTAGTGATGTTTTTAAAATAAAAACAATGGAAAGTAAATATAATGTAGGAAAACT AGAATTCATTCCCCACACGTGTCTTTTTTTTTTCTTTGTTAAGGGAAAGGATCATGTTGACTAAAACTAAACTAATTCTAGTATAGCTTG AGAAAAATATGAAGAAACACATTCAAGCTTTAAAATCTGTCAGTATTCTTTATGCTTGAAGAACAAAGTCACTTTGATTTGAAGTGAGAA CTATCATTAGGTGGTTTTCTGATTTCCTGATGAAGAGTTGGACATACTGTCTTAATCTATAGTGAAAAGAATTTGAGCTGTCTTCATAAA CACTGGGACTAGCAATGATAATAGGGAGATAAGAAACTTTAATTATCTTGATCCTTTAAGTGGATTTTATTTGGTGCATTTCTGCTCTGG GTATATAATAAAAGTGGGGGTTTTTGGTGAAATGAGTGAAGAAATGAAAGGTTTCTAAAGTGCTATCCAAATACATCAGTAACATTTTTC TAAGGAGTTTAATTGTTAAATTGGAAGTCATTCATAAGAAATATTTATGCTTGAATATGAAAATCTATGAAAGCATAAATGCTGCTGTTT GATTTGGTGGATATTAAGATTATACACATCCAACATATTAAAGTTATGAAAGAAACTTGACTTCTGAAAATCCTTAAGAGACTGCTTTCT TGATTCAGCTAGAGAAATATTATAGTCAAAACTATTGAGTGAATTTTGTTTACAAATAGGTAAATTATACATTTGTATATTTAAAGTGCT GTGACATAGTATCTTTAAGAGTTTGGCTCAGTTTTCACAGATTCATTTTGTCTTAAGAATTTCTTAAATATGTTCATGTATAATACTTGA TCAAAATATTTTTGGGTTTTTTGTTTTGTTTTAATGGGTTAGAAAATGTTTACAATCTTGGTCTTATATGATCACCAATGGAATAGTAAC TTCCAGGTTTATATCAATATGAGCTGACTTTAACTGAGTTGTTTGGGATAGGGAAGAAGCAGTCCCTCTACAGTATACAACTACTGCTTG CCAGCTGGATCAAAATAATCATGTTTTATGAAAATATCTCCCTTAAGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAAC TGGAAGTTTTCTTGAAAGCTGCTTCATCTATTAAGAAGCAATTTTCAAATTGTAGCGAATTATATTATCCCCTCTTTTAAAGAAACAGTC GTTATATGCTGATGTTTCTTAAAATAACTAAAATGTTCCTCTTAATGTGATTTTAAATGGAGTTATTTGTAGGTCCTTTCTTAGTAGTAA AGAATCTTCTAGAGGGAAACATTTGTGCTTTTAGGGATAATCTTCCTTGTGCCTCACTACATCCCTAAGTGGGTATGACTCTTGTTATTA CCACATGCTTTTTTAGTATATTTCACAAATTTACTTTTAAATATTATTTTAGATACGGTGTAACATGTGCAATTCAGAATAATTTTATAA CAGGTCATGAAAAACATAACTTTAGTTAGGATTCACAATATTTGTTCTCCACATAATGAGAGAATGAATGAGCCTTTGGAGATACTGATA TAAGGCAATTATTTTTTGCAATGTTGAATGTGTTTTTTAGTTTGATTCTTTTTTTTTCCCCCAATAGGGCACTACCTGCCATATCATCTT GTATTACTTTTTGATGTAAAGCGACTAATATTTACACTATGCCATATTTTTTTTAATTATAGTTGTAAATTATGAAAGATCCTTGAATTT TCTACAGATCTACAACTACTAATGTAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATAAAAAGTACTCTA TTTTTCTAATTTCTAGGATTTTTAAAATAACATTTCTGTAAGTCTGACATACTAATAGTCACTCAAGCAGTACCATTTATTTTAGTTTGC ATATATTTTCACTGTTTTTAATTTAATGTATTGAGTCTAATAGACTGTTTTGCAATAATTAGAATAAAGATTTATTTCTTCTAATCAAAG ATGCATAACAGCTATTATCTAGGGGACCACCAAATGTGATTTCAAAATTTTGTTAACTATTACAAATGTAATCCTTATATAGAAATTTTA ATTTTGTAAAGTAGTGTATAATATTGTAATATTAAATTCTTGTTCTTAAATTCAAATATGTATTGATCTTCAATGTGCTGTGTTAAATCT >In-frame_ENST00000282891_ENST00000398844_TCGA-EJ-5524-01A_RAD17_chr5_68670538_+_SEC24A_chr5_134050714_length(amino acids)=215AA_start in transcript=312_stop in transcript=959 MNQHELAVHKKKIEEVETWLKAQVLERQPKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQP PILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDE -------------------------------------------------------------- >In-frame_ENST00000380774_ENST00000398844_TCGA-EJ-5524-01A_RAD17_chr5_68670538_+_SEC24A_chr5_134050714_length(transcript)=3730nt_BP=446nt GTGAATTATAGTTTAATGTACTGCAAGTCCTAAACTACGGATGGGAACTATTACAGTTTATAATGTCAAAAACTTTTCTTAGACCAAAGG TATCTTCCACAAAGGTAACAGACTGGGTTGACCCATCATTTGATGATTTTCTAGAGTGTAGTGGCGTCTCTACTATTACTGCCACATCAT TAGGTGTGAATAACTCAAGTCATAGAAGAAAAAATGGGCCTTCTACATTAGAAAGCAGCAGATTTCCAGCGAGAAAAAGAGGAAATCTAT CTTCCTTAGAACAGATTTATGGTTTAGAAAATTCAAAAGAATATCTGTCTGAAAATGAACCATGGGTGGATAAATATAAACCAGAAACTC AGCATGAACTTGCTGTGCATAAAAAGAAAATTGAAGAAGTCGAAACCTGGTTAAAAGCTCAAGTTTTAGAAAGGCAACCAAAACAGAAAT CATTCCAGACTGGGACAAATGCACGTCTAGATGAACGCATTTTTGCTATGTGTCAAGTGAAAAACCAGCCCTTGGTTTACCTTATGCTCA CAACTCATCCCAGTTTGTATAGAGTTGACAATCTCTCAGATGAGGGAGCACTCAACATCAGTGATAGAACCATACCTCAGCCCCCCATTC TTCAGCTTTCAGTGGAGAAGCTGAGCAGAGATGGAGCTTTCCTCATGGATGCAGGCTCTGTACTGATGCTTTGGGTTGGAAAAAATTGTA CACAGAATTTTCTCAGCCAAGTTCTAGGAGTTCAAAACTATGCATCAATTCCACAGCCTATGACAGACCTTCCAGAACTTGATACACCAG AATCTGCCAGAATAATAGCTTTCATCTCTTGGCTTAGAGAGCAGAGACCATTTTTCCCAATACTTTATGTAATAAGGGATGAGAGTCCAA TGAAAGCAAACTTCCTTCAAAACATGATAGAAGACAGAACAGAATCTGCATTATCATATTATGAATTCCTGTTGCATATACAGCAACAAG TGAATAAATGAATGAATGAAGAAATTTGACTTATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTCTTTT TCTATTATGTTTGTGGACTAATGTGATGATTGAGATGTTCTCACTGTGATTTCAACAACCTATAGCAAATAAAAGACCACAGCAGAGAAT CAAACATGCAACTCTGAAATACTGTATTTTTCAAATCAGAATATAGCTACGTATGATTGGATACTTTTTTCTTGCCAATTATGTTTGAGT TGTTATGGATTAAAATAAGAATATTGCAGAGGCAAAGTACATTTTGTAAAATAAAGATTTCTGTGTTCTACATGTATATTTCTCATTTTT AATTTTTCTGAATCTTTGGCTGCTACATTTAAAACCTCACAAACCTAAGTGTTGCAGGGAAGTTACAAATTGATTGGTAGTGATGTTTTT AAAATAAAAACAATGGAAAGTAAATATAATGTAGGAAAACTAGAATTCATTCCCCACACGTGTCTTTTTTTTTTCTTTGTTAAGGGAAAG GATCATGTTGACTAAAACTAAACTAATTCTAGTATAGCTTGAGAAAAATATGAAGAAACACATTCAAGCTTTAAAATCTGTCAGTATTCT TTATGCTTGAAGAACAAAGTCACTTTGATTTGAAGTGAGAACTATCATTAGGTGGTTTTCTGATTTCCTGATGAAGAGTTGGACATACTG TCTTAATCTATAGTGAAAAGAATTTGAGCTGTCTTCATAAACACTGGGACTAGCAATGATAATAGGGAGATAAGAAACTTTAATTATCTT GATCCTTTAAGTGGATTTTATTTGGTGCATTTCTGCTCTGGGTATATAATAAAAGTGGGGGTTTTTGGTGAAATGAGTGAAGAAATGAAA GGTTTCTAAAGTGCTATCCAAATACATCAGTAACATTTTTCTAAGGAGTTTAATTGTTAAATTGGAAGTCATTCATAAGAAATATTTATG CTTGAATATGAAAATCTATGAAAGCATAAATGCTGCTGTTTGATTTGGTGGATATTAAGATTATACACATCCAACATATTAAAGTTATGA AAGAAACTTGACTTCTGAAAATCCTTAAGAGACTGCTTTCTTGATTCAGCTAGAGAAATATTATAGTCAAAACTATTGAGTGAATTTTGT TTACAAATAGGTAAATTATACATTTGTATATTTAAAGTGCTGTGACATAGTATCTTTAAGAGTTTGGCTCAGTTTTCACAGATTCATTTT GTCTTAAGAATTTCTTAAATATGTTCATGTATAATACTTGATCAAAATATTTTTGGGTTTTTTGTTTTGTTTTAATGGGTTAGAAAATGT TTACAATCTTGGTCTTATATGATCACCAATGGAATAGTAACTTCCAGGTTTATATCAATATGAGCTGACTTTAACTGAGTTGTTTGGGAT AGGGAAGAAGCAGTCCCTCTACAGTATACAACTACTGCTTGCCAGCTGGATCAAAATAATCATGTTTTATGAAAATATCTCCCTTAAGCA GTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTTTCTTGAAAGCTGCTTCATCTATTAAGAAGCAATTTTCAAA TTGTAGCGAATTATATTATCCCCTCTTTTAAAGAAACAGTCGTTATATGCTGATGTTTCTTAAAATAACTAAAATGTTCCTCTTAATGTG ATTTTAAATGGAGTTATTTGTAGGTCCTTTCTTAGTAGTAAAGAATCTTCTAGAGGGAAACATTTGTGCTTTTAGGGATAATCTTCCTTG TGCCTCACTACATCCCTAAGTGGGTATGACTCTTGTTATTACCACATGCTTTTTTAGTATATTTCACAAATTTACTTTTAAATATTATTT TAGATACGGTGTAACATGTGCAATTCAGAATAATTTTATAACAGGTCATGAAAAACATAACTTTAGTTAGGATTCACAATATTTGTTCTC CACATAATGAGAGAATGAATGAGCCTTTGGAGATACTGATATAAGGCAATTATTTTTTGCAATGTTGAATGTGTTTTTTAGTTTGATTCT TTTTTTTTCCCCCAATAGGGCACTACCTGCCATATCATCTTGTATTACTTTTTGATGTAAAGCGACTAATATTTACACTATGCCATATTT TTTTTAATTATAGTTGTAAATTATGAAAGATCCTTGAATTTTCTACAGATCTACAACTACTAATGTAACAGACAAGGGCAATCTTGGTAT TTAAATCTGAGCATGGCAGTTCTACCATAAAAAGTACTCTATTTTTCTAATTTCTAGGATTTTTAAAATAACATTTCTGTAAGTCTGACA TACTAATAGTCACTCAAGCAGTACCATTTATTTTAGTTTGCATATATTTTCACTGTTTTTAATTTAATGTATTGAGTCTAATAGACTGTT TTGCAATAATTAGAATAAAGATTTATTTCTTCTAATCAAAGATGCATAACAGCTATTATCTAGGGGACCACCAAATGTGATTTCAAAATT TTGTTAACTATTACAAATGTAATCCTTATATAGAAATTTTAATTTTGTAAAGTAGTGTATAATATTGTAATATTAAATTCTTGTTCTTAA ATTCAAATATGTATTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAGATTTGTCTTCCTTTTTACAGTTT >In-frame_ENST00000380774_ENST00000398844_TCGA-EJ-5524-01A_RAD17_chr5_68670538_+_SEC24A_chr5_134050714_length(amino acids)=326AA_start in transcript=20_stop in transcript=1000 MQVLNYGWELLQFIMSKTFLRPKVSSTKVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLEQIY GLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLY RVDNLSDEGALNISDRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIA -------------------------------------------------------------- >In-frame_ENST00000361732_ENST00000398844_TCGA-EJ-5524_RAD17_chr5_68670538_+_SEC24A_chr5_134050713_length(transcript)=4115nt_BP=831nt GCAACGCCCGCGAGGGTCGGCTCCCGGGGCGCTGACAACCGCCTCGTGGCCCTCGGCCGGCCTCTGAAGAGGGCAGTGAGGGGCCCCCAC CTGGGCGCCCGATGCCCAGAGCACTCTGCGCCCCCAGCCTGCCCCAGCCCAGTCCCTCCCGGCCGCGCGCCCTGACCGCAAGTGAATTCA TGGTATTTTACTTTTTTGGGAAATACTGGAAATGAAGACCTGCAACTGTAATTTGAAATAAGGAAAACTTTAATTTTCAGTATAAAAATT GCTCAAATAGAATTGCCTGATTTTAATGACAAAAGTATATGGGAGTCCACATTTATGTAAGAAATGAAACTATAAAATGTATAAATAATT TGCAAATCAGAATTGCTGTCGAAAGTTTTACTATAATGAAAGATATTTTCATACTCTCAAAAATATAGAGGAAAGGGGCCAAGATTATAG TACCAGTCACAATCTTTTGATGAGGACGAAATGAATCAGGTAACAGACTGGGTTGACCCATCATTTGATGATTTTCTAGAGTGTAGTGGC GTCTCTACTATTACTGCCACATCATTAGGTGTGAATAACTCAAGTCATAGAAGAAAAAATGGGCCTTCTACATTAGAAAGCAGCAGATTT CCAGCGAGAAAAAGAGGAAATCTATCTTCCTTAGAACAGATTTATGGTTTAGAAAATTCAAAAGAATATCTGTCTGAAAATGAACCATGG GTGGATAAATATAAACCAGAAACTCAGCATGAACTTGCTGTGCATAAAAAGAAAATTGAAGAAGTCGAAACCTGGTTAAAAGCTCAAGTT TTAGAAAGGCAACCAAAACAGAAATCATTCCAGACTGGGACAAATGCACGTCTAGATGAACGCATTTTTGCTATGTGTCAAGTGAAAAAC CAGCCCTTGGTTTACCTTATGCTCACAACTCATCCCAGTTTGTATAGAGTTGACAATCTCTCAGATGAGGGAGCACTCAACATCAGTGAT AGAACCATACCTCAGCCCCCCATTCTTCAGCTTTCAGTGGAGAAGCTGAGCAGAGATGGAGCTTTCCTCATGGATGCAGGCTCTGTACTG ATGCTTTGGGTTGGAAAAAATTGTACACAGAATTTTCTCAGCCAAGTTCTAGGAGTTCAAAACTATGCATCAATTCCACAGCCTATGACA GACCTTCCAGAACTTGATACACCAGAATCTGCCAGAATAATAGCTTTCATCTCTTGGCTTAGAGAGCAGAGACCATTTTTCCCAATACTT TATGTAATAAGGGATGAGAGTCCAATGAAAGCAAACTTCCTTCAAAACATGATAGAAGACAGAACAGAATCTGCATTATCATATTATGAA TTCCTGTTGCATATACAGCAACAAGTGAATAAATGAATGAATGAAGAAATTTGACTTATTTTTAAGGAATGTCACGATAGTGCAGAATAC CTGGAAATGTGTAATACCTTCTTTTTCTATTATGTTTGTGGACTAATGTGATGATTGAGATGTTCTCACTGTGATTTCAACAACCTATAG CAAATAAAAGACCACAGCAGAGAATCAAACATGCAACTCTGAAATACTGTATTTTTCAAATCAGAATATAGCTACGTATGATTGGATACT TTTTTCTTGCCAATTATGTTTGAGTTGTTATGGATTAAAATAAGAATATTGCAGAGGCAAAGTACATTTTGTAAAATAAAGATTTCTGTG TTCTACATGTATATTTCTCATTTTTAATTTTTCTGAATCTTTGGCTGCTACATTTAAAACCTCACAAACCTAAGTGTTGCAGGGAAGTTA CAAATTGATTGGTAGTGATGTTTTTAAAATAAAAACAATGGAAAGTAAATATAATGTAGGAAAACTAGAATTCATTCCCCACACGTGTCT TTTTTTTTTCTTTGTTAAGGGAAAGGATCATGTTGACTAAAACTAAACTAATTCTAGTATAGCTTGAGAAAAATATGAAGAAACACATTC AAGCTTTAAAATCTGTCAGTATTCTTTATGCTTGAAGAACAAAGTCACTTTGATTTGAAGTGAGAACTATCATTAGGTGGTTTTCTGATT TCCTGATGAAGAGTTGGACATACTGTCTTAATCTATAGTGAAAAGAATTTGAGCTGTCTTCATAAACACTGGGACTAGCAATGATAATAG GGAGATAAGAAACTTTAATTATCTTGATCCTTTAAGTGGATTTTATTTGGTGCATTTCTGCTCTGGGTATATAATAAAAGTGGGGGTTTT TGGTGAAATGAGTGAAGAAATGAAAGGTTTCTAAAGTGCTATCCAAATACATCAGTAACATTTTTCTAAGGAGTTTAATTGTTAAATTGG AAGTCATTCATAAGAAATATTTATGCTTGAATATGAAAATCTATGAAAGCATAAATGCTGCTGTTTGATTTGGTGGATATTAAGATTATA CACATCCAACATATTAAAGTTATGAAAGAAACTTGACTTCTGAAAATCCTTAAGAGACTGCTTTCTTGATTCAGCTAGAGAAATATTATA GTCAAAACTATTGAGTGAATTTTGTTTACAAATAGGTAAATTATACATTTGTATATTTAAAGTGCTGTGACATAGTATCTTTAAGAGTTT GGCTCAGTTTTCACAGATTCATTTTGTCTTAAGAATTTCTTAAATATGTTCATGTATAATACTTGATCAAAATATTTTTGGGTTTTTTGT TTTGTTTTAATGGGTTAGAAAATGTTTACAATCTTGGTCTTATATGATCACCAATGGAATAGTAACTTCCAGGTTTATATCAATATGAGC TGACTTTAACTGAGTTGTTTGGGATAGGGAAGAAGCAGTCCCTCTACAGTATACAACTACTGCTTGCCAGCTGGATCAAAATAATCATGT TTTATGAAAATATCTCCCTTAAGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTTTCTTGAAAGCTGCTT CATCTATTAAGAAGCAATTTTCAAATTGTAGCGAATTATATTATCCCCTCTTTTAAAGAAACAGTCGTTATATGCTGATGTTTCTTAAAA TAACTAAAATGTTCCTCTTAATGTGATTTTAAATGGAGTTATTTGTAGGTCCTTTCTTAGTAGTAAAGAATCTTCTAGAGGGAAACATTT GTGCTTTTAGGGATAATCTTCCTTGTGCCTCACTACATCCCTAAGTGGGTATGACTCTTGTTATTACCACATGCTTTTTTAGTATATTTC ACAAATTTACTTTTAAATATTATTTTAGATACGGTGTAACATGTGCAATTCAGAATAATTTTATAACAGGTCATGAAAAACATAACTTTA GTTAGGATTCACAATATTTGTTCTCCACATAATGAGAGAATGAATGAGCCTTTGGAGATACTGATATAAGGCAATTATTTTTTGCAATGT TGAATGTGTTTTTTAGTTTGATTCTTTTTTTTTCCCCCAATAGGGCACTACCTGCCATATCATCTTGTATTACTTTTTGATGTAAAGCGA CTAATATTTACACTATGCCATATTTTTTTTAATTATAGTTGTAAATTATGAAAGATCCTTGAATTTTCTACAGATCTACAACTACTAATG TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATAAAAAGTACTCTATTTTTCTAATTTCTAGGATTTTTA AAATAACATTTCTGTAAGTCTGACATACTAATAGTCACTCAAGCAGTACCATTTATTTTAGTTTGCATATATTTTCACTGTTTTTAATTT AATGTATTGAGTCTAATAGACTGTTTTGCAATAATTAGAATAAAGATTTATTTCTTCTAATCAAAGATGCATAACAGCTATTATCTAGGG GACCACCAAATGTGATTTCAAAATTTTGTTAACTATTACAAATGTAATCCTTATATAGAAATTTTAATTTTGTAAAGTAGTGTATAATAT TGTAATATTAAATTCTTGTTCTTAAATTCAAATATGTATTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACA >In-frame_ENST00000361732_ENST00000398844_TCGA-EJ-5524_RAD17_chr5_68670538_+_SEC24A_chr5_134050713_length(amino acids)=301AA_start in transcript=480_stop in transcript=1385 MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQH ELAVHKKKIEEVETWLKAQVLERQPKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQ LSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMK -------------------------------------------------------------- >In-frame_ENST00000509734_ENST00000398844_TCGA-EJ-5524_RAD17_chr5_68670538_+_SEC24A_chr5_134050713_length(transcript)=4346nt_BP=1062nt CCCCGGGAGGCCGTACCTCCGAGAGGCTCGGCGTTGAGCCCGGGTAGGGCCAGGTGGCTGCCCTTTCACCTAGGGTAGTCCCTGGTCGCC TCCGCTCTTCGCCTAAAAGGGGATGCAGCTCCGGGAAAGTAAGGCCGCCGCGGTTGCGGCTATATTATGTATATGTCTTAGAGACGTGAG TCTATCTCTGCCTTCAAGCTTTCCTGGGCTCTCGTCGCTCCTCCTCCCGACCCGCCCATCCCATCTGGGGATGAGAAGATTGAGGGTGCA GAGCCCTGTCCTGCAGCGGGGATTTGCGAGCTCAACCCGGCACCCCACTGATTACAGGATTACGTTGGACGAATATTTGAGCTTAGTATT CCCTGTTCACTGTGTGGGGTGGTGGTGGGTCGGCTAGGAATAGTCTTGAAGGTCTACCTCTGACATCTCATTTCAGTAACCTCGCATCTT CAGGGACAGTTATCTGCTTTTTAAAGGAGCAAGTGAATTCATGGTATTTTACTTTTTTGGGAAATACTGGAAATGAAGACCTGCAACTGT AATTTGAAATAAGGAAAACTTTAATTTTCAGTATAAAAATTGCTCAAATAGAATTGCCTGATTTTAATGACAAAAGGTGAATTATAGTTT AATGTACTGCAAGTCCTAAACTACGGATGGGAACTATTACAGTTTATAATGTCAAAAACTTTTCTTAGACCAAAGGTATCTTCCACAAAG GTAACAGACTGGGTTGACCCATCATTTGATGATTTTCTAGAGTGTAGTGGCGTCTCTACTATTACTGCCACATCATTAGGTGTGAATAAC TCAAGTCATAGAAGAAAAAATGGGCCTTCTACATTAGAAAGCAGCAGATTTCCAGCGAGAAAAAGAGGAAATCTATCTTCCTTAGAACAG ATTTATGGTTTAGAAAATTCAAAAGAATATCTGTCTGAAAATGAACCATGGGTGGATAAATATAAACCAGAAACTCAGCATGAACTTGCT GTGCATAAAAAGAAAATTGAAGAAGTCGAAACCTGGTTAAAAGCTCAAGTTTTAGAAAGGCAACCAAAACAGAAATCATTCCAGACTGGG ACAAATGCACGTCTAGATGAACGCATTTTTGCTATGTGTCAAGTGAAAAACCAGCCCTTGGTTTACCTTATGCTCACAACTCATCCCAGT TTGTATAGAGTTGACAATCTCTCAGATGAGGGAGCACTCAACATCAGTGATAGAACCATACCTCAGCCCCCCATTCTTCAGCTTTCAGTG GAGAAGCTGAGCAGAGATGGAGCTTTCCTCATGGATGCAGGCTCTGTACTGATGCTTTGGGTTGGAAAAAATTGTACACAGAATTTTCTC AGCCAAGTTCTAGGAGTTCAAAACTATGCATCAATTCCACAGCCTATGACAGACCTTCCAGAACTTGATACACCAGAATCTGCCAGAATA ATAGCTTTCATCTCTTGGCTTAGAGAGCAGAGACCATTTTTCCCAATACTTTATGTAATAAGGGATGAGAGTCCAATGAAAGCAAACTTC CTTCAAAACATGATAGAAGACAGAACAGAATCTGCATTATCATATTATGAATTCCTGTTGCATATACAGCAACAAGTGAATAAATGAATG AATGAAGAAATTTGACTTATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTCTTTTTCTATTATGTTTGT GGACTAATGTGATGATTGAGATGTTCTCACTGTGATTTCAACAACCTATAGCAAATAAAAGACCACAGCAGAGAATCAAACATGCAACTC TGAAATACTGTATTTTTCAAATCAGAATATAGCTACGTATGATTGGATACTTTTTTCTTGCCAATTATGTTTGAGTTGTTATGGATTAAA ATAAGAATATTGCAGAGGCAAAGTACATTTTGTAAAATAAAGATTTCTGTGTTCTACATGTATATTTCTCATTTTTAATTTTTCTGAATC TTTGGCTGCTACATTTAAAACCTCACAAACCTAAGTGTTGCAGGGAAGTTACAAATTGATTGGTAGTGATGTTTTTAAAATAAAAACAAT GGAAAGTAAATATAATGTAGGAAAACTAGAATTCATTCCCCACACGTGTCTTTTTTTTTTCTTTGTTAAGGGAAAGGATCATGTTGACTA AAACTAAACTAATTCTAGTATAGCTTGAGAAAAATATGAAGAAACACATTCAAGCTTTAAAATCTGTCAGTATTCTTTATGCTTGAAGAA CAAAGTCACTTTGATTTGAAGTGAGAACTATCATTAGGTGGTTTTCTGATTTCCTGATGAAGAGTTGGACATACTGTCTTAATCTATAGT GAAAAGAATTTGAGCTGTCTTCATAAACACTGGGACTAGCAATGATAATAGGGAGATAAGAAACTTTAATTATCTTGATCCTTTAAGTGG ATTTTATTTGGTGCATTTCTGCTCTGGGTATATAATAAAAGTGGGGGTTTTTGGTGAAATGAGTGAAGAAATGAAAGGTTTCTAAAGTGC TATCCAAATACATCAGTAACATTTTTCTAAGGAGTTTAATTGTTAAATTGGAAGTCATTCATAAGAAATATTTATGCTTGAATATGAAAA TCTATGAAAGCATAAATGCTGCTGTTTGATTTGGTGGATATTAAGATTATACACATCCAACATATTAAAGTTATGAAAGAAACTTGACTT CTGAAAATCCTTAAGAGACTGCTTTCTTGATTCAGCTAGAGAAATATTATAGTCAAAACTATTGAGTGAATTTTGTTTACAAATAGGTAA ATTATACATTTGTATATTTAAAGTGCTGTGACATAGTATCTTTAAGAGTTTGGCTCAGTTTTCACAGATTCATTTTGTCTTAAGAATTTC TTAAATATGTTCATGTATAATACTTGATCAAAATATTTTTGGGTTTTTTGTTTTGTTTTAATGGGTTAGAAAATGTTTACAATCTTGGTC TTATATGATCACCAATGGAATAGTAACTTCCAGGTTTATATCAATATGAGCTGACTTTAACTGAGTTGTTTGGGATAGGGAAGAAGCAGT CCCTCTACAGTATACAACTACTGCTTGCCAGCTGGATCAAAATAATCATGTTTTATGAAAATATCTCCCTTAAGCAGTGTTAAGGTTGGT TTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTTTCTTGAAAGCTGCTTCATCTATTAAGAAGCAATTTTCAAATTGTAGCGAATTAT ATTATCCCCTCTTTTAAAGAAACAGTCGTTATATGCTGATGTTTCTTAAAATAACTAAAATGTTCCTCTTAATGTGATTTTAAATGGAGT TATTTGTAGGTCCTTTCTTAGTAGTAAAGAATCTTCTAGAGGGAAACATTTGTGCTTTTAGGGATAATCTTCCTTGTGCCTCACTACATC CCTAAGTGGGTATGACTCTTGTTATTACCACATGCTTTTTTAGTATATTTCACAAATTTACTTTTAAATATTATTTTAGATACGGTGTAA CATGTGCAATTCAGAATAATTTTATAACAGGTCATGAAAAACATAACTTTAGTTAGGATTCACAATATTTGTTCTCCACATAATGAGAGA ATGAATGAGCCTTTGGAGATACTGATATAAGGCAATTATTTTTTGCAATGTTGAATGTGTTTTTTAGTTTGATTCTTTTTTTTTCCCCCA ATAGGGCACTACCTGCCATATCATCTTGTATTACTTTTTGATGTAAAGCGACTAATATTTACACTATGCCATATTTTTTTTAATTATAGT TGTAAATTATGAAAGATCCTTGAATTTTCTACAGATCTACAACTACTAATGTAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCAT GGCAGTTCTACCATAAAAAGTACTCTATTTTTCTAATTTCTAGGATTTTTAAAATAACATTTCTGTAAGTCTGACATACTAATAGTCACT CAAGCAGTACCATTTATTTTAGTTTGCATATATTTTCACTGTTTTTAATTTAATGTATTGAGTCTAATAGACTGTTTTGCAATAATTAGA ATAAAGATTTATTTCTTCTAATCAAAGATGCATAACAGCTATTATCTAGGGGACCACCAAATGTGATTTCAAAATTTTGTTAACTATTAC AAATGTAATCCTTATATAGAAATTTTAATTTTGTAAAGTAGTGTATAATATTGTAATATTAAATTCTTGTTCTTAAATTCAAATATGTAT TGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAGATTTGTCTTCCTTTTTACAGTTTGTAATTTTCACTGT >In-frame_ENST00000509734_ENST00000398844_TCGA-EJ-5524_RAD17_chr5_68670538_+_SEC24A_chr5_134050713_length(amino acids)=326AA_start in transcript=636_stop in transcript=1616 MQVLNYGWELLQFIMSKTFLRPKVSSTKVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLEQIY GLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLY RVDNLSDEGALNISDRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIA -------------------------------------------------------------- >In-frame_ENST00000354868_ENST00000398844_TCGA-EJ-5524_RAD17_chr5_68670538_+_SEC24A_chr5_134050713_length(transcript)=4173nt_BP=889nt GAGGCCGTACCTCCGAGAGGCTCGGCGTTGAGCCCGGGTAGGGCCAGGTGGCTGCCCTTTCACCTAGGGTAGTCCCTGGTCGCCTCCGCT CTTCGCCTAAAAGGGGATGCAGCTCCGGGAAACAAGTGAATTCATGGTATTTTACTTTTTTGGGAAATACTGGAAATGAAGACCTGCAAC TGTAATTTGAAATAAGGAAAACTTTAATTTTCAGTATAAAAATTGCTCAAATAGAATTGCCTGATTTTAATGACAAAAGGTGAATTATAG TTTAATGTACTGCAAGTCCTAAACTACGGATGGGAACTATTACAGTTTATAATGTCAAAAACTTTTCTTAGACCAAAGGTATCTTCCACA AAGTATATGGGAGTCCACATTTATGTAAGAAATGAAACTATAAAATGTATAAATAATTTGCAAATCAGAATTGCTGTCGAAAGTTTTACT ATAATGAAAGATATTTTCATACTCTCAAAAATATAGAGGAAAGGGGCCAAGATTATAGTACCAGTCACAATCTTTTGATGAGGACGAAAT GAATCAGGTAACAGACTGGGTTGACCCATCATTTGATGATTTTCTAGAGTGTAGTGGCGTCTCTACTATTACTGCCACATCATTAGGTGT GAATAACTCAAGTCATAGAAGAAAAAATGGGCCTTCTACATTAGAAAGCAGCAGATTTCCAGCGAGAAAAAGAGGAAATCTATCTTCCTT AGAACAGATTTATGGTTTAGAAAATTCAAAAGAATATCTGTCTGAAAATGAACCATGGGTGGATAAATATAAACCAGAAACTCAGCATGA ACTTGCTGTGCATAAAAAGAAAATTGAAGAAGTCGAAACCTGGTTAAAAGCTCAAGTTTTAGAAAGGCAACCAAAACAGAAATCATTCCA GACTGGGACAAATGCACGTCTAGATGAACGCATTTTTGCTATGTGTCAAGTGAAAAACCAGCCCTTGGTTTACCTTATGCTCACAACTCA TCCCAGTTTGTATAGAGTTGACAATCTCTCAGATGAGGGAGCACTCAACATCAGTGATAGAACCATACCTCAGCCCCCCATTCTTCAGCT TTCAGTGGAGAAGCTGAGCAGAGATGGAGCTTTCCTCATGGATGCAGGCTCTGTACTGATGCTTTGGGTTGGAAAAAATTGTACACAGAA TTTTCTCAGCCAAGTTCTAGGAGTTCAAAACTATGCATCAATTCCACAGCCTATGACAGACCTTCCAGAACTTGATACACCAGAATCTGC CAGAATAATAGCTTTCATCTCTTGGCTTAGAGAGCAGAGACCATTTTTCCCAATACTTTATGTAATAAGGGATGAGAGTCCAATGAAAGC AAACTTCCTTCAAAACATGATAGAAGACAGAACAGAATCTGCATTATCATATTATGAATTCCTGTTGCATATACAGCAACAAGTGAATAA ATGAATGAATGAAGAAATTTGACTTATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTCTTTTTCTATTA TGTTTGTGGACTAATGTGATGATTGAGATGTTCTCACTGTGATTTCAACAACCTATAGCAAATAAAAGACCACAGCAGAGAATCAAACAT GCAACTCTGAAATACTGTATTTTTCAAATCAGAATATAGCTACGTATGATTGGATACTTTTTTCTTGCCAATTATGTTTGAGTTGTTATG GATTAAAATAAGAATATTGCAGAGGCAAAGTACATTTTGTAAAATAAAGATTTCTGTGTTCTACATGTATATTTCTCATTTTTAATTTTT CTGAATCTTTGGCTGCTACATTTAAAACCTCACAAACCTAAGTGTTGCAGGGAAGTTACAAATTGATTGGTAGTGATGTTTTTAAAATAA AAACAATGGAAAGTAAATATAATGTAGGAAAACTAGAATTCATTCCCCACACGTGTCTTTTTTTTTTCTTTGTTAAGGGAAAGGATCATG TTGACTAAAACTAAACTAATTCTAGTATAGCTTGAGAAAAATATGAAGAAACACATTCAAGCTTTAAAATCTGTCAGTATTCTTTATGCT TGAAGAACAAAGTCACTTTGATTTGAAGTGAGAACTATCATTAGGTGGTTTTCTGATTTCCTGATGAAGAGTTGGACATACTGTCTTAAT CTATAGTGAAAAGAATTTGAGCTGTCTTCATAAACACTGGGACTAGCAATGATAATAGGGAGATAAGAAACTTTAATTATCTTGATCCTT TAAGTGGATTTTATTTGGTGCATTTCTGCTCTGGGTATATAATAAAAGTGGGGGTTTTTGGTGAAATGAGTGAAGAAATGAAAGGTTTCT AAAGTGCTATCCAAATACATCAGTAACATTTTTCTAAGGAGTTTAATTGTTAAATTGGAAGTCATTCATAAGAAATATTTATGCTTGAAT ATGAAAATCTATGAAAGCATAAATGCTGCTGTTTGATTTGGTGGATATTAAGATTATACACATCCAACATATTAAAGTTATGAAAGAAAC TTGACTTCTGAAAATCCTTAAGAGACTGCTTTCTTGATTCAGCTAGAGAAATATTATAGTCAAAACTATTGAGTGAATTTTGTTTACAAA TAGGTAAATTATACATTTGTATATTTAAAGTGCTGTGACATAGTATCTTTAAGAGTTTGGCTCAGTTTTCACAGATTCATTTTGTCTTAA GAATTTCTTAAATATGTTCATGTATAATACTTGATCAAAATATTTTTGGGTTTTTTGTTTTGTTTTAATGGGTTAGAAAATGTTTACAAT CTTGGTCTTATATGATCACCAATGGAATAGTAACTTCCAGGTTTATATCAATATGAGCTGACTTTAACTGAGTTGTTTGGGATAGGGAAG AAGCAGTCCCTCTACAGTATACAACTACTGCTTGCCAGCTGGATCAAAATAATCATGTTTTATGAAAATATCTCCCTTAAGCAGTGTTAA GGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTTTCTTGAAAGCTGCTTCATCTATTAAGAAGCAATTTTCAAATTGTAGC GAATTATATTATCCCCTCTTTTAAAGAAACAGTCGTTATATGCTGATGTTTCTTAAAATAACTAAAATGTTCCTCTTAATGTGATTTTAA ATGGAGTTATTTGTAGGTCCTTTCTTAGTAGTAAAGAATCTTCTAGAGGGAAACATTTGTGCTTTTAGGGATAATCTTCCTTGTGCCTCA CTACATCCCTAAGTGGGTATGACTCTTGTTATTACCACATGCTTTTTTAGTATATTTCACAAATTTACTTTTAAATATTATTTTAGATAC GGTGTAACATGTGCAATTCAGAATAATTTTATAACAGGTCATGAAAAACATAACTTTAGTTAGGATTCACAATATTTGTTCTCCACATAA TGAGAGAATGAATGAGCCTTTGGAGATACTGATATAAGGCAATTATTTTTTGCAATGTTGAATGTGTTTTTTAGTTTGATTCTTTTTTTT TCCCCCAATAGGGCACTACCTGCCATATCATCTTGTATTACTTTTTGATGTAAAGCGACTAATATTTACACTATGCCATATTTTTTTTAA TTATAGTTGTAAATTATGAAAGATCCTTGAATTTTCTACAGATCTACAACTACTAATGTAACAGACAAGGGCAATCTTGGTATTTAAATC TGAGCATGGCAGTTCTACCATAAAAAGTACTCTATTTTTCTAATTTCTAGGATTTTTAAAATAACATTTCTGTAAGTCTGACATACTAAT AGTCACTCAAGCAGTACCATTTATTTTAGTTTGCATATATTTTCACTGTTTTTAATTTAATGTATTGAGTCTAATAGACTGTTTTGCAAT AATTAGAATAAAGATTTATTTCTTCTAATCAAAGATGCATAACAGCTATTATCTAGGGGACCACCAAATGTGATTTCAAAATTTTGTTAA CTATTACAAATGTAATCCTTATATAGAAATTTTAATTTTGTAAAGTAGTGTATAATATTGTAATATTAAATTCTTGTTCTTAAATTCAAA TATGTATTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAGATTTGTCTTCCTTTTTACAGTTTGTAATTT >In-frame_ENST00000354868_ENST00000398844_TCGA-EJ-5524_RAD17_chr5_68670538_+_SEC24A_chr5_134050713_length(amino acids)=301AA_start in transcript=538_stop in transcript=1443 MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQH ELAVHKKKIEEVETWLKAQVLERQPKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQ LSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMK -------------------------------------------------------------- >In-frame_ENST00000354312_ENST00000398844_TCGA-EJ-5524_RAD17_chr5_68670538_+_SEC24A_chr5_134050713_length(transcript)=4056nt_BP=772nt CGAGAGGCTCGGCGTTGAGCCCGGGTAGGGCCAGGTGGCTGCCCTTTCACCTAGGGTAGTCCCTGGTCGCCTCCGCTCTTCGCCTAAAAG GGGATGCAGCTCCGGGAAACAAGTGAATTCATGGTATTTTACTTTTTTGGGAAATACTGGAAATGAAGACCTGCAACTGTAATTTGAAAT AAGGAAAACTTTAATTTTCAGTATAAAAATTGCTCAAATAGAATTGCCTGATTTTAATGACAAAAGTATATGGGAGTCCACATTTATGTA AGAAATGAAACTATAAAATGTATAAATAATTTGCAAATCAGAATTGCTGTCGAAAGTTTTACTATAATGAAAGATATTTTCATACTCTCA AAAATATAGAGGAAAGGGGCCAAGATTATAGTACCAGTCACAATCTTTTGATGAGGACGAAATGAATCAGGTAACAGACTGGGTTGACCC ATCATTTGATGATTTTCTAGAGTGTAGTGGCGTCTCTACTATTACTGCCACATCATTAGGTGTGAATAACTCAAGTCATAGAAGAAAAAA TGGGCCTTCTACATTAGAAAGCAGCAGATTTCCAGCGAGAAAAAGAGGAAATCTATCTTCCTTAGAACAGATTTATGGTTTAGAAAATTC AAAAGAATATCTGTCTGAAAATGAACCATGGGTGGATAAATATAAACCAGAAACTCAGCATGAACTTGCTGTGCATAAAAAGAAAATTGA AGAAGTCGAAACCTGGTTAAAAGCTCAAGTTTTAGAAAGGCAACCAAAACAGAAATCATTCCAGACTGGGACAAATGCACGTCTAGATGA ACGCATTTTTGCTATGTGTCAAGTGAAAAACCAGCCCTTGGTTTACCTTATGCTCACAACTCATCCCAGTTTGTATAGAGTTGACAATCT CTCAGATGAGGGAGCACTCAACATCAGTGATAGAACCATACCTCAGCCCCCCATTCTTCAGCTTTCAGTGGAGAAGCTGAGCAGAGATGG AGCTTTCCTCATGGATGCAGGCTCTGTACTGATGCTTTGGGTTGGAAAAAATTGTACACAGAATTTTCTCAGCCAAGTTCTAGGAGTTCA AAACTATGCATCAATTCCACAGCCTATGACAGACCTTCCAGAACTTGATACACCAGAATCTGCCAGAATAATAGCTTTCATCTCTTGGCT TAGAGAGCAGAGACCATTTTTCCCAATACTTTATGTAATAAGGGATGAGAGTCCAATGAAAGCAAACTTCCTTCAAAACATGATAGAAGA CAGAACAGAATCTGCATTATCATATTATGAATTCCTGTTGCATATACAGCAACAAGTGAATAAATGAATGAATGAAGAAATTTGACTTAT TTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTCTTTTTCTATTATGTTTGTGGACTAATGTGATGATTGAG ATGTTCTCACTGTGATTTCAACAACCTATAGCAAATAAAAGACCACAGCAGAGAATCAAACATGCAACTCTGAAATACTGTATTTTTCAA ATCAGAATATAGCTACGTATGATTGGATACTTTTTTCTTGCCAATTATGTTTGAGTTGTTATGGATTAAAATAAGAATATTGCAGAGGCA AAGTACATTTTGTAAAATAAAGATTTCTGTGTTCTACATGTATATTTCTCATTTTTAATTTTTCTGAATCTTTGGCTGCTACATTTAAAA CCTCACAAACCTAAGTGTTGCAGGGAAGTTACAAATTGATTGGTAGTGATGTTTTTAAAATAAAAACAATGGAAAGTAAATATAATGTAG GAAAACTAGAATTCATTCCCCACACGTGTCTTTTTTTTTTCTTTGTTAAGGGAAAGGATCATGTTGACTAAAACTAAACTAATTCTAGTA TAGCTTGAGAAAAATATGAAGAAACACATTCAAGCTTTAAAATCTGTCAGTATTCTTTATGCTTGAAGAACAAAGTCACTTTGATTTGAA GTGAGAACTATCATTAGGTGGTTTTCTGATTTCCTGATGAAGAGTTGGACATACTGTCTTAATCTATAGTGAAAAGAATTTGAGCTGTCT TCATAAACACTGGGACTAGCAATGATAATAGGGAGATAAGAAACTTTAATTATCTTGATCCTTTAAGTGGATTTTATTTGGTGCATTTCT GCTCTGGGTATATAATAAAAGTGGGGGTTTTTGGTGAAATGAGTGAAGAAATGAAAGGTTTCTAAAGTGCTATCCAAATACATCAGTAAC ATTTTTCTAAGGAGTTTAATTGTTAAATTGGAAGTCATTCATAAGAAATATTTATGCTTGAATATGAAAATCTATGAAAGCATAAATGCT GCTGTTTGATTTGGTGGATATTAAGATTATACACATCCAACATATTAAAGTTATGAAAGAAACTTGACTTCTGAAAATCCTTAAGAGACT GCTTTCTTGATTCAGCTAGAGAAATATTATAGTCAAAACTATTGAGTGAATTTTGTTTACAAATAGGTAAATTATACATTTGTATATTTA AAGTGCTGTGACATAGTATCTTTAAGAGTTTGGCTCAGTTTTCACAGATTCATTTTGTCTTAAGAATTTCTTAAATATGTTCATGTATAA TACTTGATCAAAATATTTTTGGGTTTTTTGTTTTGTTTTAATGGGTTAGAAAATGTTTACAATCTTGGTCTTATATGATCACCAATGGAA TAGTAACTTCCAGGTTTATATCAATATGAGCTGACTTTAACTGAGTTGTTTGGGATAGGGAAGAAGCAGTCCCTCTACAGTATACAACTA CTGCTTGCCAGCTGGATCAAAATAATCATGTTTTATGAAAATATCTCCCTTAAGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCAC ATTGAACTGGAAGTTTTCTTGAAAGCTGCTTCATCTATTAAGAAGCAATTTTCAAATTGTAGCGAATTATATTATCCCCTCTTTTAAAGA AACAGTCGTTATATGCTGATGTTTCTTAAAATAACTAAAATGTTCCTCTTAATGTGATTTTAAATGGAGTTATTTGTAGGTCCTTTCTTA GTAGTAAAGAATCTTCTAGAGGGAAACATTTGTGCTTTTAGGGATAATCTTCCTTGTGCCTCACTACATCCCTAAGTGGGTATGACTCTT GTTATTACCACATGCTTTTTTAGTATATTTCACAAATTTACTTTTAAATATTATTTTAGATACGGTGTAACATGTGCAATTCAGAATAAT TTTATAACAGGTCATGAAAAACATAACTTTAGTTAGGATTCACAATATTTGTTCTCCACATAATGAGAGAATGAATGAGCCTTTGGAGAT ACTGATATAAGGCAATTATTTTTTGCAATGTTGAATGTGTTTTTTAGTTTGATTCTTTTTTTTTCCCCCAATAGGGCACTACCTGCCATA TCATCTTGTATTACTTTTTGATGTAAAGCGACTAATATTTACACTATGCCATATTTTTTTTAATTATAGTTGTAAATTATGAAAGATCCT TGAATTTTCTACAGATCTACAACTACTAATGTAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATAAAAAG TACTCTATTTTTCTAATTTCTAGGATTTTTAAAATAACATTTCTGTAAGTCTGACATACTAATAGTCACTCAAGCAGTACCATTTATTTT AGTTTGCATATATTTTCACTGTTTTTAATTTAATGTATTGAGTCTAATAGACTGTTTTGCAATAATTAGAATAAAGATTTATTTCTTCTA ATCAAAGATGCATAACAGCTATTATCTAGGGGACCACCAAATGTGATTTCAAAATTTTGTTAACTATTACAAATGTAATCCTTATATAGA AATTTTAATTTTGTAAAGTAGTGTATAATATTGTAATATTAAATTCTTGTTCTTAAATTCAAATATGTATTGATCTTCAATGTGCTGTGT TAAATCTTGCTTCTCTGAAAAGTTGGAGACAAGATTTGTCTTCCTTTTTACAGTTTGTAATTTTCACTGTTTTATTCCTGTTAAAAAAAA >In-frame_ENST00000354312_ENST00000398844_TCGA-EJ-5524_RAD17_chr5_68670538_+_SEC24A_chr5_134050713_length(amino acids)=301AA_start in transcript=421_stop in transcript=1326 MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQH ELAVHKKKIEEVETWLKAQVLERQPKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQ LSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMK -------------------------------------------------------------- >In-frame_ENST00000345306_ENST00000398844_TCGA-EJ-5524_RAD17_chr5_68670538_+_SEC24A_chr5_134050713_length(transcript)=3902nt_BP=618nt AGCCCGGGTAGGGCCAGGTGGCTGCCCTTTCACCTAGGGTAGTCCCTGGTCGCCTCCGCTCTTCGCCTAAAAGGGGATGCAGCTCCGGGA AATATATGGGAGTCCACATTTATGTAAGAAATGAAACTATAAAATGTATAAATAATTTGCAAATCAGAATTGCTGTCGAAAGTTTTACTA TAATGAAAGATATTTTCATACTCTCAAAAATATAGAGGAAAGGGGCCAAGATTATAGTACCAGTCACAATCTTTTGATGAGGACGAAATG AATCAGGTAACAGACTGGGTTGACCCATCATTTGATGATTTTCTAGAGTGTAGTGGCGTCTCTACTATTACTGCCACATCATTAGGTGTG AATAACTCAAGTCATAGAAGAAAAAATGGGCCTTCTACATTAGAAAGCAGCAGATTTCCAGCGAGAAAAAGAGGAAATCTATCTTCCTTA GAACAGATTTATGGTTTAGAAAATTCAAAAGAATATCTGTCTGAAAATGAACCATGGGTGGATAAATATAAACCAGAAACTCAGCATGAA CTTGCTGTGCATAAAAAGAAAATTGAAGAAGTCGAAACCTGGTTAAAAGCTCAAGTTTTAGAAAGGCAACCAAAACAGAAATCATTCCAG ACTGGGACAAATGCACGTCTAGATGAACGCATTTTTGCTATGTGTCAAGTGAAAAACCAGCCCTTGGTTTACCTTATGCTCACAACTCAT CCCAGTTTGTATAGAGTTGACAATCTCTCAGATGAGGGAGCACTCAACATCAGTGATAGAACCATACCTCAGCCCCCCATTCTTCAGCTT TCAGTGGAGAAGCTGAGCAGAGATGGAGCTTTCCTCATGGATGCAGGCTCTGTACTGATGCTTTGGGTTGGAAAAAATTGTACACAGAAT TTTCTCAGCCAAGTTCTAGGAGTTCAAAACTATGCATCAATTCCACAGCCTATGACAGACCTTCCAGAACTTGATACACCAGAATCTGCC AGAATAATAGCTTTCATCTCTTGGCTTAGAGAGCAGAGACCATTTTTCCCAATACTTTATGTAATAAGGGATGAGAGTCCAATGAAAGCA AACTTCCTTCAAAACATGATAGAAGACAGAACAGAATCTGCATTATCATATTATGAATTCCTGTTGCATATACAGCAACAAGTGAATAAA TGAATGAATGAAGAAATTTGACTTATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTCTTTTTCTATTAT GTTTGTGGACTAATGTGATGATTGAGATGTTCTCACTGTGATTTCAACAACCTATAGCAAATAAAAGACCACAGCAGAGAATCAAACATG CAACTCTGAAATACTGTATTTTTCAAATCAGAATATAGCTACGTATGATTGGATACTTTTTTCTTGCCAATTATGTTTGAGTTGTTATGG ATTAAAATAAGAATATTGCAGAGGCAAAGTACATTTTGTAAAATAAAGATTTCTGTGTTCTACATGTATATTTCTCATTTTTAATTTTTC TGAATCTTTGGCTGCTACATTTAAAACCTCACAAACCTAAGTGTTGCAGGGAAGTTACAAATTGATTGGTAGTGATGTTTTTAAAATAAA AACAATGGAAAGTAAATATAATGTAGGAAAACTAGAATTCATTCCCCACACGTGTCTTTTTTTTTTCTTTGTTAAGGGAAAGGATCATGT TGACTAAAACTAAACTAATTCTAGTATAGCTTGAGAAAAATATGAAGAAACACATTCAAGCTTTAAAATCTGTCAGTATTCTTTATGCTT GAAGAACAAAGTCACTTTGATTTGAAGTGAGAACTATCATTAGGTGGTTTTCTGATTTCCTGATGAAGAGTTGGACATACTGTCTTAATC TATAGTGAAAAGAATTTGAGCTGTCTTCATAAACACTGGGACTAGCAATGATAATAGGGAGATAAGAAACTTTAATTATCTTGATCCTTT AAGTGGATTTTATTTGGTGCATTTCTGCTCTGGGTATATAATAAAAGTGGGGGTTTTTGGTGAAATGAGTGAAGAAATGAAAGGTTTCTA AAGTGCTATCCAAATACATCAGTAACATTTTTCTAAGGAGTTTAATTGTTAAATTGGAAGTCATTCATAAGAAATATTTATGCTTGAATA TGAAAATCTATGAAAGCATAAATGCTGCTGTTTGATTTGGTGGATATTAAGATTATACACATCCAACATATTAAAGTTATGAAAGAAACT TGACTTCTGAAAATCCTTAAGAGACTGCTTTCTTGATTCAGCTAGAGAAATATTATAGTCAAAACTATTGAGTGAATTTTGTTTACAAAT AGGTAAATTATACATTTGTATATTTAAAGTGCTGTGACATAGTATCTTTAAGAGTTTGGCTCAGTTTTCACAGATTCATTTTGTCTTAAG AATTTCTTAAATATGTTCATGTATAATACTTGATCAAAATATTTTTGGGTTTTTTGTTTTGTTTTAATGGGTTAGAAAATGTTTACAATC TTGGTCTTATATGATCACCAATGGAATAGTAACTTCCAGGTTTATATCAATATGAGCTGACTTTAACTGAGTTGTTTGGGATAGGGAAGA AGCAGTCCCTCTACAGTATACAACTACTGCTTGCCAGCTGGATCAAAATAATCATGTTTTATGAAAATATCTCCCTTAAGCAGTGTTAAG GTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTTTCTTGAAAGCTGCTTCATCTATTAAGAAGCAATTTTCAAATTGTAGCG AATTATATTATCCCCTCTTTTAAAGAAACAGTCGTTATATGCTGATGTTTCTTAAAATAACTAAAATGTTCCTCTTAATGTGATTTTAAA TGGAGTTATTTGTAGGTCCTTTCTTAGTAGTAAAGAATCTTCTAGAGGGAAACATTTGTGCTTTTAGGGATAATCTTCCTTGTGCCTCAC TACATCCCTAAGTGGGTATGACTCTTGTTATTACCACATGCTTTTTTAGTATATTTCACAAATTTACTTTTAAATATTATTTTAGATACG GTGTAACATGTGCAATTCAGAATAATTTTATAACAGGTCATGAAAAACATAACTTTAGTTAGGATTCACAATATTTGTTCTCCACATAAT GAGAGAATGAATGAGCCTTTGGAGATACTGATATAAGGCAATTATTTTTTGCAATGTTGAATGTGTTTTTTAGTTTGATTCTTTTTTTTT CCCCCAATAGGGCACTACCTGCCATATCATCTTGTATTACTTTTTGATGTAAAGCGACTAATATTTACACTATGCCATATTTTTTTTAAT TATAGTTGTAAATTATGAAAGATCCTTGAATTTTCTACAGATCTACAACTACTAATGTAACAGACAAGGGCAATCTTGGTATTTAAATCT GAGCATGGCAGTTCTACCATAAAAAGTACTCTATTTTTCTAATTTCTAGGATTTTTAAAATAACATTTCTGTAAGTCTGACATACTAATA GTCACTCAAGCAGTACCATTTATTTTAGTTTGCATATATTTTCACTGTTTTTAATTTAATGTATTGAGTCTAATAGACTGTTTTGCAATA ATTAGAATAAAGATTTATTTCTTCTAATCAAAGATGCATAACAGCTATTATCTAGGGGACCACCAAATGTGATTTCAAAATTTTGTTAAC TATTACAAATGTAATCCTTATATAGAAATTTTAATTTTGTAAAGTAGTGTATAATATTGTAATATTAAATTCTTGTTCTTAAATTCAAAT ATGTATTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAGATTTGTCTTCCTTTTTACAGTTTGTAATTTT >In-frame_ENST00000345306_ENST00000398844_TCGA-EJ-5524_RAD17_chr5_68670538_+_SEC24A_chr5_134050713_length(amino acids)=301AA_start in transcript=267_stop in transcript=1172 MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQH ELAVHKKKIEEVETWLKAQVLERQPKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQ LSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMK -------------------------------------------------------------- >In-frame_ENST00000305138_ENST00000398844_TCGA-EJ-5524_RAD17_chr5_68670538_+_SEC24A_chr5_134050713_length(transcript)=4277nt_BP=993nt ACCTGTATACCTTTTGAAACGTCACAGTCTCTAATCGTGAACGATTTGGGGCGGAGGGCTGAACAATGTGTTTTCTAGTGTGTCGAGGTG TTTATAGGCTATGTGTGCCTCCAAACTGTAAAGTAGTCCAGTATACTTTCCAATGTATAAGTTTGTAGACCTTAAACTTTTCTTCTGGCT AACTTAAAATCGTTGAATTCACTAGTTTGCATAAACATTTAAGAATTTGAAAACACGGTTGAAAAACAGTGTTACCAAGAAATTTTGTAA TAACATGTTCAAATGAAGACAAAAATTTTACAGTTTAAGACTTAAATTCTTCGTCCACAGCAAGTGAATTCATGGTATTTTACTTTTTTG GGAAATACTGGAAATGAAGACCTGCAACTGTAATTTGAAATAAGGAAAACTTTAATTTTCAGTATAAAAATTGCTCAAATAGAATTGCCT GATTTTAATGACAAAAGTATATGGGAGTCCACATTTATGTAAGAAATGAAACTATAAAATGTATAAATAATTTGCAAATCAGAATTGCTG TCGAAAGTTTTACTATAATGAAAGATATTTTCATACTCTCAAAAATATAGAGGAAAGGGGCCAAGATTATAGTACCAGTCACAATCTTTT GATGAGGACGAAATGAATCAGGTAACAGACTGGGTTGACCCATCATTTGATGATTTTCTAGAGTGTAGTGGCGTCTCTACTATTACTGCC ACATCATTAGGTGTGAATAACTCAAGTCATAGAAGAAAAAATGGGCCTTCTACATTAGAAAGCAGCAGATTTCCAGCGAGAAAAAGAGGA AATCTATCTTCCTTAGAACAGATTTATGGTTTAGAAAATTCAAAAGAATATCTGTCTGAAAATGAACCATGGGTGGATAAATATAAACCA GAAACTCAGCATGAACTTGCTGTGCATAAAAAGAAAATTGAAGAAGTCGAAACCTGGTTAAAAGCTCAAGTTTTAGAAAGGCAACCAAAA CAGAAATCATTCCAGACTGGGACAAATGCACGTCTAGATGAACGCATTTTTGCTATGTGTCAAGTGAAAAACCAGCCCTTGGTTTACCTT ATGCTCACAACTCATCCCAGTTTGTATAGAGTTGACAATCTCTCAGATGAGGGAGCACTCAACATCAGTGATAGAACCATACCTCAGCCC CCCATTCTTCAGCTTTCAGTGGAGAAGCTGAGCAGAGATGGAGCTTTCCTCATGGATGCAGGCTCTGTACTGATGCTTTGGGTTGGAAAA AATTGTACACAGAATTTTCTCAGCCAAGTTCTAGGAGTTCAAAACTATGCATCAATTCCACAGCCTATGACAGACCTTCCAGAACTTGAT ACACCAGAATCTGCCAGAATAATAGCTTTCATCTCTTGGCTTAGAGAGCAGAGACCATTTTTCCCAATACTTTATGTAATAAGGGATGAG AGTCCAATGAAAGCAAACTTCCTTCAAAACATGATAGAAGACAGAACAGAATCTGCATTATCATATTATGAATTCCTGTTGCATATACAG CAACAAGTGAATAAATGAATGAATGAAGAAATTTGACTTATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACC TTCTTTTTCTATTATGTTTGTGGACTAATGTGATGATTGAGATGTTCTCACTGTGATTTCAACAACCTATAGCAAATAAAAGACCACAGC AGAGAATCAAACATGCAACTCTGAAATACTGTATTTTTCAAATCAGAATATAGCTACGTATGATTGGATACTTTTTTCTTGCCAATTATG TTTGAGTTGTTATGGATTAAAATAAGAATATTGCAGAGGCAAAGTACATTTTGTAAAATAAAGATTTCTGTGTTCTACATGTATATTTCT CATTTTTAATTTTTCTGAATCTTTGGCTGCTACATTTAAAACCTCACAAACCTAAGTGTTGCAGGGAAGTTACAAATTGATTGGTAGTGA TGTTTTTAAAATAAAAACAATGGAAAGTAAATATAATGTAGGAAAACTAGAATTCATTCCCCACACGTGTCTTTTTTTTTTCTTTGTTAA GGGAAAGGATCATGTTGACTAAAACTAAACTAATTCTAGTATAGCTTGAGAAAAATATGAAGAAACACATTCAAGCTTTAAAATCTGTCA GTATTCTTTATGCTTGAAGAACAAAGTCACTTTGATTTGAAGTGAGAACTATCATTAGGTGGTTTTCTGATTTCCTGATGAAGAGTTGGA CATACTGTCTTAATCTATAGTGAAAAGAATTTGAGCTGTCTTCATAAACACTGGGACTAGCAATGATAATAGGGAGATAAGAAACTTTAA TTATCTTGATCCTTTAAGTGGATTTTATTTGGTGCATTTCTGCTCTGGGTATATAATAAAAGTGGGGGTTTTTGGTGAAATGAGTGAAGA AATGAAAGGTTTCTAAAGTGCTATCCAAATACATCAGTAACATTTTTCTAAGGAGTTTAATTGTTAAATTGGAAGTCATTCATAAGAAAT ATTTATGCTTGAATATGAAAATCTATGAAAGCATAAATGCTGCTGTTTGATTTGGTGGATATTAAGATTATACACATCCAACATATTAAA GTTATGAAAGAAACTTGACTTCTGAAAATCCTTAAGAGACTGCTTTCTTGATTCAGCTAGAGAAATATTATAGTCAAAACTATTGAGTGA ATTTTGTTTACAAATAGGTAAATTATACATTTGTATATTTAAAGTGCTGTGACATAGTATCTTTAAGAGTTTGGCTCAGTTTTCACAGAT TCATTTTGTCTTAAGAATTTCTTAAATATGTTCATGTATAATACTTGATCAAAATATTTTTGGGTTTTTTGTTTTGTTTTAATGGGTTAG AAAATGTTTACAATCTTGGTCTTATATGATCACCAATGGAATAGTAACTTCCAGGTTTATATCAATATGAGCTGACTTTAACTGAGTTGT TTGGGATAGGGAAGAAGCAGTCCCTCTACAGTATACAACTACTGCTTGCCAGCTGGATCAAAATAATCATGTTTTATGAAAATATCTCCC TTAAGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTTTCTTGAAAGCTGCTTCATCTATTAAGAAGCAAT TTTCAAATTGTAGCGAATTATATTATCCCCTCTTTTAAAGAAACAGTCGTTATATGCTGATGTTTCTTAAAATAACTAAAATGTTCCTCT TAATGTGATTTTAAATGGAGTTATTTGTAGGTCCTTTCTTAGTAGTAAAGAATCTTCTAGAGGGAAACATTTGTGCTTTTAGGGATAATC TTCCTTGTGCCTCACTACATCCCTAAGTGGGTATGACTCTTGTTATTACCACATGCTTTTTTAGTATATTTCACAAATTTACTTTTAAAT ATTATTTTAGATACGGTGTAACATGTGCAATTCAGAATAATTTTATAACAGGTCATGAAAAACATAACTTTAGTTAGGATTCACAATATT TGTTCTCCACATAATGAGAGAATGAATGAGCCTTTGGAGATACTGATATAAGGCAATTATTTTTTGCAATGTTGAATGTGTTTTTTAGTT TGATTCTTTTTTTTTCCCCCAATAGGGCACTACCTGCCATATCATCTTGTATTACTTTTTGATGTAAAGCGACTAATATTTACACTATGC CATATTTTTTTTAATTATAGTTGTAAATTATGAAAGATCCTTGAATTTTCTACAGATCTACAACTACTAATGTAACAGACAAGGGCAATC TTGGTATTTAAATCTGAGCATGGCAGTTCTACCATAAAAAGTACTCTATTTTTCTAATTTCTAGGATTTTTAAAATAACATTTCTGTAAG TCTGACATACTAATAGTCACTCAAGCAGTACCATTTATTTTAGTTTGCATATATTTTCACTGTTTTTAATTTAATGTATTGAGTCTAATA GACTGTTTTGCAATAATTAGAATAAAGATTTATTTCTTCTAATCAAAGATGCATAACAGCTATTATCTAGGGGACCACCAAATGTGATTT CAAAATTTTGTTAACTATTACAAATGTAATCCTTATATAGAAATTTTAATTTTGTAAAGTAGTGTATAATATTGTAATATTAAATTCTTG TTCTTAAATTCAAATATGTATTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAGATTTGTCTTCCTTTTT >In-frame_ENST00000305138_ENST00000398844_TCGA-EJ-5524_RAD17_chr5_68670538_+_SEC24A_chr5_134050713_length(amino acids)=301AA_start in transcript=642_stop in transcript=1547 MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQH ELAVHKKKIEEVETWLKAQVLERQPKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQ LSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMK -------------------------------------------------------------- >In-frame_ENST00000282891_ENST00000398844_TCGA-EJ-5524_RAD17_chr5_68670538_+_SEC24A_chr5_134050713_length(transcript)=3689nt_BP=405nt CAAGTGAATTCATGGTATTTTACTTTTTTGGGAAATACTGGAAATGAAGACCTGCAACTGTAATTTGAAATAAGGAAAACTTTAATTTTC AGTATAAAAATTGCTCAAATAGAATTGCCTGATTTTAATGACAAAAGTATATGGGAGTCCACATTTATGTAAGAAATGAAACTATAAAAT GTATAAATAATTTGCAAATCAGAATTGCTGTCGAAAGTTTTACTATAATGAAAGATATTTTCATACTCTCAAAAATATAGAGGAAAGGGG CCAAGATTATAGTACCAGTCACAATCTTTTGATGAGGACGAAATGAATCAGCATGAACTTGCTGTGCATAAAAAGAAAATTGAAGAAGTC GAAACCTGGTTAAAAGCTCAAGTTTTAGAAAGGCAACCAAAACAGAAATCATTCCAGACTGGGACAAATGCACGTCTAGATGAACGCATT TTTGCTATGTGTCAAGTGAAAAACCAGCCCTTGGTTTACCTTATGCTCACAACTCATCCCAGTTTGTATAGAGTTGACAATCTCTCAGAT GAGGGAGCACTCAACATCAGTGATAGAACCATACCTCAGCCCCCCATTCTTCAGCTTTCAGTGGAGAAGCTGAGCAGAGATGGAGCTTTC CTCATGGATGCAGGCTCTGTACTGATGCTTTGGGTTGGAAAAAATTGTACACAGAATTTTCTCAGCCAAGTTCTAGGAGTTCAAAACTAT GCATCAATTCCACAGCCTATGACAGACCTTCCAGAACTTGATACACCAGAATCTGCCAGAATAATAGCTTTCATCTCTTGGCTTAGAGAG CAGAGACCATTTTTCCCAATACTTTATGTAATAAGGGATGAGAGTCCAATGAAAGCAAACTTCCTTCAAAACATGATAGAAGACAGAACA GAATCTGCATTATCATATTATGAATTCCTGTTGCATATACAGCAACAAGTGAATAAATGAATGAATGAAGAAATTTGACTTATTTTTAAG GAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTCTTTTTCTATTATGTTTGTGGACTAATGTGATGATTGAGATGTTCT CACTGTGATTTCAACAACCTATAGCAAATAAAAGACCACAGCAGAGAATCAAACATGCAACTCTGAAATACTGTATTTTTCAAATCAGAA TATAGCTACGTATGATTGGATACTTTTTTCTTGCCAATTATGTTTGAGTTGTTATGGATTAAAATAAGAATATTGCAGAGGCAAAGTACA TTTTGTAAAATAAAGATTTCTGTGTTCTACATGTATATTTCTCATTTTTAATTTTTCTGAATCTTTGGCTGCTACATTTAAAACCTCACA AACCTAAGTGTTGCAGGGAAGTTACAAATTGATTGGTAGTGATGTTTTTAAAATAAAAACAATGGAAAGTAAATATAATGTAGGAAAACT AGAATTCATTCCCCACACGTGTCTTTTTTTTTTCTTTGTTAAGGGAAAGGATCATGTTGACTAAAACTAAACTAATTCTAGTATAGCTTG AGAAAAATATGAAGAAACACATTCAAGCTTTAAAATCTGTCAGTATTCTTTATGCTTGAAGAACAAAGTCACTTTGATTTGAAGTGAGAA CTATCATTAGGTGGTTTTCTGATTTCCTGATGAAGAGTTGGACATACTGTCTTAATCTATAGTGAAAAGAATTTGAGCTGTCTTCATAAA CACTGGGACTAGCAATGATAATAGGGAGATAAGAAACTTTAATTATCTTGATCCTTTAAGTGGATTTTATTTGGTGCATTTCTGCTCTGG GTATATAATAAAAGTGGGGGTTTTTGGTGAAATGAGTGAAGAAATGAAAGGTTTCTAAAGTGCTATCCAAATACATCAGTAACATTTTTC TAAGGAGTTTAATTGTTAAATTGGAAGTCATTCATAAGAAATATTTATGCTTGAATATGAAAATCTATGAAAGCATAAATGCTGCTGTTT GATTTGGTGGATATTAAGATTATACACATCCAACATATTAAAGTTATGAAAGAAACTTGACTTCTGAAAATCCTTAAGAGACTGCTTTCT TGATTCAGCTAGAGAAATATTATAGTCAAAACTATTGAGTGAATTTTGTTTACAAATAGGTAAATTATACATTTGTATATTTAAAGTGCT GTGACATAGTATCTTTAAGAGTTTGGCTCAGTTTTCACAGATTCATTTTGTCTTAAGAATTTCTTAAATATGTTCATGTATAATACTTGA TCAAAATATTTTTGGGTTTTTTGTTTTGTTTTAATGGGTTAGAAAATGTTTACAATCTTGGTCTTATATGATCACCAATGGAATAGTAAC TTCCAGGTTTATATCAATATGAGCTGACTTTAACTGAGTTGTTTGGGATAGGGAAGAAGCAGTCCCTCTACAGTATACAACTACTGCTTG CCAGCTGGATCAAAATAATCATGTTTTATGAAAATATCTCCCTTAAGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAAC TGGAAGTTTTCTTGAAAGCTGCTTCATCTATTAAGAAGCAATTTTCAAATTGTAGCGAATTATATTATCCCCTCTTTTAAAGAAACAGTC GTTATATGCTGATGTTTCTTAAAATAACTAAAATGTTCCTCTTAATGTGATTTTAAATGGAGTTATTTGTAGGTCCTTTCTTAGTAGTAA AGAATCTTCTAGAGGGAAACATTTGTGCTTTTAGGGATAATCTTCCTTGTGCCTCACTACATCCCTAAGTGGGTATGACTCTTGTTATTA CCACATGCTTTTTTAGTATATTTCACAAATTTACTTTTAAATATTATTTTAGATACGGTGTAACATGTGCAATTCAGAATAATTTTATAA CAGGTCATGAAAAACATAACTTTAGTTAGGATTCACAATATTTGTTCTCCACATAATGAGAGAATGAATGAGCCTTTGGAGATACTGATA TAAGGCAATTATTTTTTGCAATGTTGAATGTGTTTTTTAGTTTGATTCTTTTTTTTTCCCCCAATAGGGCACTACCTGCCATATCATCTT GTATTACTTTTTGATGTAAAGCGACTAATATTTACACTATGCCATATTTTTTTTAATTATAGTTGTAAATTATGAAAGATCCTTGAATTT TCTACAGATCTACAACTACTAATGTAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATAAAAAGTACTCTA TTTTTCTAATTTCTAGGATTTTTAAAATAACATTTCTGTAAGTCTGACATACTAATAGTCACTCAAGCAGTACCATTTATTTTAGTTTGC ATATATTTTCACTGTTTTTAATTTAATGTATTGAGTCTAATAGACTGTTTTGCAATAATTAGAATAAAGATTTATTTCTTCTAATCAAAG ATGCATAACAGCTATTATCTAGGGGACCACCAAATGTGATTTCAAAATTTTGTTAACTATTACAAATGTAATCCTTATATAGAAATTTTA ATTTTGTAAAGTAGTGTATAATATTGTAATATTAAATTCTTGTTCTTAAATTCAAATATGTATTGATCTTCAATGTGCTGTGTTAAATCT >In-frame_ENST00000282891_ENST00000398844_TCGA-EJ-5524_RAD17_chr5_68670538_+_SEC24A_chr5_134050713_length(amino acids)=215AA_start in transcript=312_stop in transcript=959 MNQHELAVHKKKIEEVETWLKAQVLERQPKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQP PILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDE -------------------------------------------------------------- >In-frame_ENST00000380774_ENST00000398844_TCGA-EJ-5524_RAD17_chr5_68670538_+_SEC24A_chr5_134050713_length(transcript)=3730nt_BP=446nt GTGAATTATAGTTTAATGTACTGCAAGTCCTAAACTACGGATGGGAACTATTACAGTTTATAATGTCAAAAACTTTTCTTAGACCAAAGG TATCTTCCACAAAGGTAACAGACTGGGTTGACCCATCATTTGATGATTTTCTAGAGTGTAGTGGCGTCTCTACTATTACTGCCACATCAT TAGGTGTGAATAACTCAAGTCATAGAAGAAAAAATGGGCCTTCTACATTAGAAAGCAGCAGATTTCCAGCGAGAAAAAGAGGAAATCTAT CTTCCTTAGAACAGATTTATGGTTTAGAAAATTCAAAAGAATATCTGTCTGAAAATGAACCATGGGTGGATAAATATAAACCAGAAACTC AGCATGAACTTGCTGTGCATAAAAAGAAAATTGAAGAAGTCGAAACCTGGTTAAAAGCTCAAGTTTTAGAAAGGCAACCAAAACAGAAAT CATTCCAGACTGGGACAAATGCACGTCTAGATGAACGCATTTTTGCTATGTGTCAAGTGAAAAACCAGCCCTTGGTTTACCTTATGCTCA CAACTCATCCCAGTTTGTATAGAGTTGACAATCTCTCAGATGAGGGAGCACTCAACATCAGTGATAGAACCATACCTCAGCCCCCCATTC TTCAGCTTTCAGTGGAGAAGCTGAGCAGAGATGGAGCTTTCCTCATGGATGCAGGCTCTGTACTGATGCTTTGGGTTGGAAAAAATTGTA CACAGAATTTTCTCAGCCAAGTTCTAGGAGTTCAAAACTATGCATCAATTCCACAGCCTATGACAGACCTTCCAGAACTTGATACACCAG AATCTGCCAGAATAATAGCTTTCATCTCTTGGCTTAGAGAGCAGAGACCATTTTTCCCAATACTTTATGTAATAAGGGATGAGAGTCCAA TGAAAGCAAACTTCCTTCAAAACATGATAGAAGACAGAACAGAATCTGCATTATCATATTATGAATTCCTGTTGCATATACAGCAACAAG TGAATAAATGAATGAATGAAGAAATTTGACTTATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTCTTTT TCTATTATGTTTGTGGACTAATGTGATGATTGAGATGTTCTCACTGTGATTTCAACAACCTATAGCAAATAAAAGACCACAGCAGAGAAT CAAACATGCAACTCTGAAATACTGTATTTTTCAAATCAGAATATAGCTACGTATGATTGGATACTTTTTTCTTGCCAATTATGTTTGAGT TGTTATGGATTAAAATAAGAATATTGCAGAGGCAAAGTACATTTTGTAAAATAAAGATTTCTGTGTTCTACATGTATATTTCTCATTTTT AATTTTTCTGAATCTTTGGCTGCTACATTTAAAACCTCACAAACCTAAGTGTTGCAGGGAAGTTACAAATTGATTGGTAGTGATGTTTTT AAAATAAAAACAATGGAAAGTAAATATAATGTAGGAAAACTAGAATTCATTCCCCACACGTGTCTTTTTTTTTTCTTTGTTAAGGGAAAG GATCATGTTGACTAAAACTAAACTAATTCTAGTATAGCTTGAGAAAAATATGAAGAAACACATTCAAGCTTTAAAATCTGTCAGTATTCT TTATGCTTGAAGAACAAAGTCACTTTGATTTGAAGTGAGAACTATCATTAGGTGGTTTTCTGATTTCCTGATGAAGAGTTGGACATACTG TCTTAATCTATAGTGAAAAGAATTTGAGCTGTCTTCATAAACACTGGGACTAGCAATGATAATAGGGAGATAAGAAACTTTAATTATCTT GATCCTTTAAGTGGATTTTATTTGGTGCATTTCTGCTCTGGGTATATAATAAAAGTGGGGGTTTTTGGTGAAATGAGTGAAGAAATGAAA GGTTTCTAAAGTGCTATCCAAATACATCAGTAACATTTTTCTAAGGAGTTTAATTGTTAAATTGGAAGTCATTCATAAGAAATATTTATG CTTGAATATGAAAATCTATGAAAGCATAAATGCTGCTGTTTGATTTGGTGGATATTAAGATTATACACATCCAACATATTAAAGTTATGA AAGAAACTTGACTTCTGAAAATCCTTAAGAGACTGCTTTCTTGATTCAGCTAGAGAAATATTATAGTCAAAACTATTGAGTGAATTTTGT TTACAAATAGGTAAATTATACATTTGTATATTTAAAGTGCTGTGACATAGTATCTTTAAGAGTTTGGCTCAGTTTTCACAGATTCATTTT GTCTTAAGAATTTCTTAAATATGTTCATGTATAATACTTGATCAAAATATTTTTGGGTTTTTTGTTTTGTTTTAATGGGTTAGAAAATGT TTACAATCTTGGTCTTATATGATCACCAATGGAATAGTAACTTCCAGGTTTATATCAATATGAGCTGACTTTAACTGAGTTGTTTGGGAT AGGGAAGAAGCAGTCCCTCTACAGTATACAACTACTGCTTGCCAGCTGGATCAAAATAATCATGTTTTATGAAAATATCTCCCTTAAGCA GTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTTTCTTGAAAGCTGCTTCATCTATTAAGAAGCAATTTTCAAA TTGTAGCGAATTATATTATCCCCTCTTTTAAAGAAACAGTCGTTATATGCTGATGTTTCTTAAAATAACTAAAATGTTCCTCTTAATGTG ATTTTAAATGGAGTTATTTGTAGGTCCTTTCTTAGTAGTAAAGAATCTTCTAGAGGGAAACATTTGTGCTTTTAGGGATAATCTTCCTTG TGCCTCACTACATCCCTAAGTGGGTATGACTCTTGTTATTACCACATGCTTTTTTAGTATATTTCACAAATTTACTTTTAAATATTATTT TAGATACGGTGTAACATGTGCAATTCAGAATAATTTTATAACAGGTCATGAAAAACATAACTTTAGTTAGGATTCACAATATTTGTTCTC CACATAATGAGAGAATGAATGAGCCTTTGGAGATACTGATATAAGGCAATTATTTTTTGCAATGTTGAATGTGTTTTTTAGTTTGATTCT TTTTTTTTCCCCCAATAGGGCACTACCTGCCATATCATCTTGTATTACTTTTTGATGTAAAGCGACTAATATTTACACTATGCCATATTT TTTTTAATTATAGTTGTAAATTATGAAAGATCCTTGAATTTTCTACAGATCTACAACTACTAATGTAACAGACAAGGGCAATCTTGGTAT TTAAATCTGAGCATGGCAGTTCTACCATAAAAAGTACTCTATTTTTCTAATTTCTAGGATTTTTAAAATAACATTTCTGTAAGTCTGACA TACTAATAGTCACTCAAGCAGTACCATTTATTTTAGTTTGCATATATTTTCACTGTTTTTAATTTAATGTATTGAGTCTAATAGACTGTT TTGCAATAATTAGAATAAAGATTTATTTCTTCTAATCAAAGATGCATAACAGCTATTATCTAGGGGACCACCAAATGTGATTTCAAAATT TTGTTAACTATTACAAATGTAATCCTTATATAGAAATTTTAATTTTGTAAAGTAGTGTATAATATTGTAATATTAAATTCTTGTTCTTAA ATTCAAATATGTATTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAGATTTGTCTTCCTTTTTACAGTTT >In-frame_ENST00000380774_ENST00000398844_TCGA-EJ-5524_RAD17_chr5_68670538_+_SEC24A_chr5_134050713_length(amino acids)=326AA_start in transcript=20_stop in transcript=1000 MQVLNYGWELLQFIMSKTFLRPKVSSTKVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRFPARKRGNLSSLEQIY GLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQVLERQPKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLY RVDNLSDEGALNISDRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIA -------------------------------------------------------------- |
Top |
Fusion Gene PPI Analysis for RAD17-SEC24A |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000282891 | + | 3 | 16 | 432_681 | 31.0 | 585.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000305138 | + | 4 | 17 | 432_681 | 117.0 | 671.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000345306 | + | 4 | 17 | 432_681 | 117.0 | 671.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000354312 | + | 5 | 18 | 432_681 | 117.0 | 671.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000354868 | + | 6 | 19 | 432_681 | 117.0 | 671.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000358030 | + | 3 | 16 | 432_681 | 0 | 506.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000361732 | + | 5 | 18 | 432_681 | 117.0 | 671.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000380774 | + | 3 | 16 | 432_681 | 128.0 | 682.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000509734 | + | 5 | 18 | 432_681 | 128.0 | 682.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050713 | ENST00000521422 | + | 4 | 17 | 432_681 | 0 | 506.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000282891 | + | 3 | 16 | 432_681 | 31.0 | 585.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000305138 | + | 4 | 17 | 432_681 | 117.0 | 671.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000345306 | + | 4 | 17 | 432_681 | 117.0 | 671.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000354312 | + | 5 | 18 | 432_681 | 117.0 | 671.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000354868 | + | 6 | 19 | 432_681 | 117.0 | 671.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000358030 | + | 3 | 16 | 432_681 | 0 | 506.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000361732 | + | 5 | 18 | 432_681 | 117.0 | 671.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000380774 | + | 3 | 16 | 432_681 | 128.0 | 682.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000509734 | + | 5 | 18 | 432_681 | 128.0 | 682.0 | MCM7 |
| Hgene | RAD17 | chr5:68670538 | chr5:134050714 | ENST00000521422 | + | 4 | 17 | 432_681 | 0 | 506.0 | MCM7 |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for RAD17-SEC24A |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
Related Diseases for RAD17-SEC24A |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2021-Present -The University of Texas Health Science Center at Houston (UTHealth)
Web File Viewing | Emergency Information |Campus Carry|Site Policies