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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:RANBP10-KARS (FusionGDB2 ID:71587)

Fusion Gene Summary for RANBP10-KARS

check button Fusion gene summary
Fusion gene informationFusion gene name: RANBP10-KARS
Fusion gene ID: 71587
HgeneTgene
Gene symbol

RANBP10

KARS

Gene ID

57610

3735

Gene nameRAN binding protein 10lysyl-tRNA synthetase 1
Synonyms-CMTRIB|DFNB89|KARS|KARS2|KRS
Cytomap

16q22.1

16q23.1

Type of geneprotein-codingprotein-coding
Descriptionran-binding protein 10lysine--tRNA ligaselysRSlysine tRNA ligase
Modification date2020031320200318
UniProtAcc.

Q15046

Ensembl transtripts involved in fusion geneENST00000317506, ENST00000448631, 
ENST00000536251, ENST00000411657, 
ENST00000602677, ENST00000425512, 
ENST00000602887, 		ENST00000319410, 
ENST00000302445, ENST00000568378, 
Fusion gene scores* DoF score11 X 9 X 7=6937 X 7 X 4=196
# samples 139
** MAII scorelog2(13/693*10)=-2.41434372910876
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(9/196*10)=-1.12285674778553
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: RANBP10 [Title/Abstract] AND KARS [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointRANBP10(67839331)-KARS(75675621), # samples:1
Anticipated loss of major functional domain due to fusion event.RANBP10-KARS seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF.
RANBP10-KARS seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneKARS

GO:0000187

activation of MAPK activity

15851690

TgeneKARS

GO:0002741

positive regulation of cytokine secretion involved in immune response

15851690

TgeneKARS

GO:0006430

lysyl-tRNA aminoacylation

9278442|10952987|23159739

TgeneKARS

GO:0008285

negative regulation of cell proliferation

15851690

TgeneKARS

GO:0010759

positive regulation of macrophage chemotaxis

15851690

TgeneKARS

GO:0015966

diadenosine tetraphosphate biosynthetic process

23159739

TgeneKARS

GO:0033209

tumor necrosis factor-mediated signaling pathway

15851690

TgeneKARS

GO:0043032

positive regulation of macrophage activation

15851690

TgeneKARS

GO:0070374

positive regulation of ERK1 and ERK2 cascade

15851690

TgeneKARS

GO:1900017

positive regulation of cytokine production involved in inflammatory response

15851690

TgeneKARS

GO:1900745

positive regulation of p38MAPK cascade

15851690

TgeneKARS

GO:1905050

positive regulation of metallopeptidase activity

15851690


check buttonFusion gene breakpoints across RANBP10 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across KARS (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4OVTCGA-61-2008-02ARANBP10chr16

67839331

-KARSchr16

75675621

-


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Fusion Gene ORF analysis for RANBP10-KARS

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000317506ENST00000319410RANBP10chr16

67839331

-KARSchr16

75675621

-
In-frameENST00000317506ENST00000302445RANBP10chr16

67839331

-KARSchr16

75675621

-
5CDS-intronENST00000317506ENST00000568378RANBP10chr16

67839331

-KARSchr16

75675621

-
In-frameENST00000448631ENST00000319410RANBP10chr16

67839331

-KARSchr16

75675621

-
In-frameENST00000448631ENST00000302445RANBP10chr16

67839331

-KARSchr16

75675621

-
5CDS-intronENST00000448631ENST00000568378RANBP10chr16

67839331

-KARSchr16

75675621

-
5UTR-3CDSENST00000536251ENST00000319410RANBP10chr16

67839331

-KARSchr16

75675621

-
5UTR-3CDSENST00000536251ENST00000302445RANBP10chr16

67839331

-KARSchr16

75675621

-
5UTR-intronENST00000536251ENST00000568378RANBP10chr16

67839331

-KARSchr16

75675621

-
intron-3CDSENST00000411657ENST00000319410RANBP10chr16

67839331

-KARSchr16

75675621

-
intron-3CDSENST00000411657ENST00000302445RANBP10chr16

67839331

-KARSchr16

75675621

-
intron-intronENST00000411657ENST00000568378RANBP10chr16

67839331

-KARSchr16

75675621

-
In-frameENST00000602677ENST00000319410RANBP10chr16

67839331

-KARSchr16

75675621

-
In-frameENST00000602677ENST00000302445RANBP10chr16

67839331

-KARSchr16

75675621

-
5CDS-intronENST00000602677ENST00000568378RANBP10chr16

67839331

-KARSchr16

75675621

-
Frame-shiftENST00000425512ENST00000319410RANBP10chr16

67839331

-KARSchr16

75675621

-
Frame-shiftENST00000425512ENST00000302445RANBP10chr16

67839331

-KARSchr16

75675621

-
5CDS-intronENST00000425512ENST00000568378RANBP10chr16

67839331

-KARSchr16

75675621

-
5UTR-3CDSENST00000602887ENST00000319410RANBP10chr16

67839331

-KARSchr16

75675621

-
5UTR-3CDSENST00000602887ENST00000302445RANBP10chr16

67839331

-KARSchr16

75675621

-
5UTR-intronENST00000602887ENST00000568378RANBP10chr16

67839331

-KARSchr16

75675621

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000317506RANBP10chr1667839331-ENST00000319410KARSchr1675675621-2366463502194714
ENST00000317506RANBP10chr1667839331-ENST00000302445KARSchr1675675621-2366463502194714
ENST00000448631RANBP10chr1667839331-ENST00000319410KARSchr1675675621-2274371242102692
ENST00000448631RANBP10chr1667839331-ENST00000302445KARSchr1675675621-2274371242102692
ENST00000602677RANBP10chr1667839331-ENST00000319410KARSchr1675675621-2274371242102692
ENST00000602677RANBP10chr1667839331-ENST00000302445KARSchr1675675621-2274371242102692

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000317506ENST00000319410RANBP10chr1667839331-KARSchr1675675621-0.0015418690.99845815
ENST00000317506ENST00000302445RANBP10chr1667839331-KARSchr1675675621-0.0015418690.99845815
ENST00000448631ENST00000319410RANBP10chr1667839331-KARSchr1675675621-0.0015330890.9984669
ENST00000448631ENST00000302445RANBP10chr1667839331-KARSchr1675675621-0.0015330890.9984669
ENST00000602677ENST00000319410RANBP10chr1667839331-KARSchr1675675621-0.0015330890.9984669
ENST00000602677ENST00000302445RANBP10chr1667839331-KARSchr1675675621-0.0015330890.9984669

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Fusion Genomic Features for RANBP10-KARS


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for RANBP10-KARS


check button Go to

FGviewer for the breakpoints of chr16:67839331-chr16:75675621

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.KARS

Q15046

FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA (PubMed:9278442, PubMed:18029264, PubMed:18272479). When secreted, acts as a signaling molecule that induces immune response through the activation of monocyte/macrophages (PubMed:15851690). Catalyzes the synthesis of the signaling molecule diadenosine tetraphosphate (Ap4A), and thereby mediates disruption of the complex between HINT1 and MITF and the concomitant activation of MITF transcriptional activity (PubMed:5338216, PubMed:14975237, PubMed:19524539, PubMed:23159739). {ECO:0000269|PubMed:14975237, ECO:0000269|PubMed:15851690, ECO:0000269|PubMed:18029264, ECO:0000269|PubMed:19524539, ECO:0000269|PubMed:28887846, ECO:0000269|PubMed:5338216, ECO:0000269|PubMed:9278442}.; FUNCTION: (Microbial infection) Interacts with HIV-1 virus GAG protein, facilitating the selective packaging of tRNA(3)(Lys), the primer for reverse transcription initiation. {ECO:0000269|PubMed:15220430}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneKARSchr16:67839331chr16:75675621ENST00000302445014323_32520.666666666666668598.0Nucleotide bindingATP
TgeneKARSchr16:67839331chr16:75675621ENST00000302445014331_33220.666666666666668598.0Nucleotide bindingATP
TgeneKARSchr16:67839331chr16:75675621ENST00000302445014494_49520.666666666666668598.0Nucleotide bindingATP
TgeneKARSchr16:67839331chr16:75675621ENST00000302445014550_55320.666666666666668598.0Nucleotide bindingATP
TgeneKARSchr16:67839331chr16:75675621ENST00000319410115323_32548.666666666666664626.0Nucleotide bindingATP
TgeneKARSchr16:67839331chr16:75675621ENST00000319410115331_33248.666666666666664626.0Nucleotide bindingATP
TgeneKARSchr16:67839331chr16:75675621ENST00000319410115494_49548.666666666666664626.0Nucleotide bindingATP
TgeneKARSchr16:67839331chr16:75675621ENST00000319410115550_55348.666666666666664626.0Nucleotide bindingATP

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneRANBP10chr16:67839331chr16:75675621ENST00000317506-214346_453115.66666666666667621.0Compositional biasNote=Ser-rich
HgeneRANBP10chr16:67839331chr16:75675621ENST00000317506-214253_285115.66666666666667621.0DomainLisH
HgeneRANBP10chr16:67839331chr16:75675621ENST00000317506-214291_348115.66666666666667621.0DomainCTLH
HgeneRANBP10chr16:67839331chr16:75675621ENST00000317506-21435_222115.66666666666667621.0DomainB30.2/SPRY


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Fusion Gene Sequence for RANBP10-KARS


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000317506_ENST00000319410_TCGA-61-2008-02A_RANBP10_chr16_67839331_-_KARS_chr16_75675621_length(transcript)=2366nt_BP=463nt
GGACTCGGACTCGGTTTCCCTGCGGCCCAGGGAGGCTCACGGGCCATTGGCTGAGCGGGGCGGATCTGGTCCCGCTCCTCCCCGCCCCCA
GTGACACAATAGTAGCTCCCTCCAAGATGGCGGCAGCGACGGCAGACCCGGGAGCTGGGAACCCGCAGCCTGGGGACTCCTCCGGCGGGG
GCGCTGGGGGCGGGCTGCCGTCCCCTGGGGAGCAGGAGCTGAGCCGGCGCTTGCAGCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTC
CGCTGCCGCGCTCCTGGAGCCCCAAGGACAAATACAACTACATTGGTCTCTCCCAGGGCAACCTCCGCGTCCACTACAAAGGTCATGGCA
AAAATCACAAAGATGCGGCCTCAGTGCGTGCCACCCACCCCATACCTGCTGCCTGTGGCATTTATTACTTTGAAGTGAAGATTGTCAGCA
AAGGAAGAGATGGTGAGCTGAAGAGACGCCTGAAAGCTGAGAAGAAAGTAGCAGAGAAGGAGGCCAAACAGAAAGAGCTCAGTGAGAAAC
AGCTAAGCCAAGCCACTGCTGCTGCCACCAACCACACCACTGATAATGGTGTGGGTCCTGAGGAAGAGAGCGTGGACCCAAATCAATACT
ACAAAATCCGCAGTCAAGCAATTCATCAGCTGAAGGTCAATGGGGAAGACCCATACCCACACAAGTTCCATGTAGACATCTCACTCACTG
ACTTCATCCAAAAATATAGTCACCTGCAGCCTGGGGATCACCTGACTGACATCACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAG
CTTCTGGGGGAAAGCTCATCTTCTATGATCTTCGAGGAGAGGGGGTGAAGTTGCAAGTCATGGCCAATTCCAGAAATTATAAATCAGAAG
AAGAATTTATTCATATTAATAACAAACTGCGTCGGGGAGACATAATTGGAGTTCAGGGGAATCCTGGTAAAACCAAGAAGGGTGAGCTGA
GCATCATTCCGTATGAGATCACACTGCTGTCTCCCTGTTTGCATATGTTACCTCATCTTCACTTTGGCCTCAAAGACAAGGAAACAAGGT
ATCGCCAGAGATACTTGGACTTGATCCTGAATGACTTTGTGAGGCAGAAATTTATCATCCGCTCTAAGATCATCACATATATAAGAAGTT
TCTTAGATGAGCTGGGATTCCTAGAGATTGAAACTCCCATGATGAACATCATCCCAGGGGGAGCCGTGGCCAAGCCTTTCATCACTTATC
ACAACGAGCTGGACATGAACTTATATATGAGAATTGCTCCAGAACTCTATCATAAGATGCTTGTGGTTGGTGGCATCGACCGGGTTTATG
AAATTGGACGCCAGTTCCGGAATGAGGGGATTGATTTGACGCACAATCCTGAGTTCACCACCTGTGAGTTCTACATGGCCTATGCAGACT
ATCACGATCTCATGGAAATCACGGAGAAGATGGTTTCAGGGATGGTGAAGCATATTACAGGCAGTTACAAGGTCACCTACCACCCAGATG
GCCCAGAGGGCCAAGCCTACGATGTTGACTTCACCCCACCCTTCCGGCGAATCAACATGGTAGAAGAGCTTGAGAAAGCCCTGGGGATGA
AGCTGCCAGAAACGAACCTCTTTGAAACTGAAGAAACTCGCAAAATTCTTGATGATATCTGTGTGGCAAAAGCTGTTGAATGCCCTCCAC
CTCGGACCACAGCCAGGCTCCTTGACAAGCTTGTTGGGGAGTTCCTGGAAGTGACTTGCATCAATCCTACATTCATCTGTGATCACCCAC
AGATAATGAGCCCTTTGGCTAAATGGCACCGCTCTAAAGAGGGTCTGACTGAGCGCTTTGAGCTGTTTGTCATGAAGAAAGAGATATGCA
ATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCTTTTTGAAGAACAGGCCAAGGCCAAGGCTGCAGGTGATGATGAGGCCA
TGTTCATAGATGAAAACTTCTGTACTGCCCTGGAATATGGGCTGCCCCCCACAGCTGGCTGGGGCATGGGCATTGATCGAGTCGCCATGT
TTCTCACGGACTCCAACAACATCAAGGAAGTACTTCTGTTTCCTGCCATGAAACCCGAAGACAAGAAGGAGAATGTAGCAACCACTGATA
CACTGGAAAGCACAACAGTTGGCACTTCTGTCTAGAAAATAATAATTGCAAGTTGTATAACTCAGGCGTCTTTGCATTTCTGCGAAAGAT
CAAGGTCTGCAAGGGAATTCTTGTGTGCTGCTTTCCATTTGACACCGCAGTTCTGTTCAGCCATCAGAAGAGAGACAAGGAATTAAAAAT

>In-frame_ENST00000317506_ENST00000319410_TCGA-61-2008-02A_RANBP10_chr16_67839331_-_KARS_chr16_75675621_length(amino acids)=714AA_start in transcript=50_stop in transcript=2194
MSGADLVPLLPAPSDTIVAPSKMAAATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPKDKYNYIGL
SQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGELKRRLKAEKKVAEKEAKQKELSEKQLSQATAAATNHTTDNG
VGPEEESVDPNQYYKIRSQAIHQLKVNGEDPYPHKFHVDISLTDFIQKYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVK
LQVMANSRNYKSEEEFIHINNKLRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQK
FIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP
EFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVEELEKALGMKLPETNLFETEETRKIL
DDICVAKAVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFE

--------------------------------------------------------------
>In-frame_ENST00000317506_ENST00000302445_TCGA-61-2008-02A_RANBP10_chr16_67839331_-_KARS_chr16_75675621_length(transcript)=2366nt_BP=463nt
GGACTCGGACTCGGTTTCCCTGCGGCCCAGGGAGGCTCACGGGCCATTGGCTGAGCGGGGCGGATCTGGTCCCGCTCCTCCCCGCCCCCA
GTGACACAATAGTAGCTCCCTCCAAGATGGCGGCAGCGACGGCAGACCCGGGAGCTGGGAACCCGCAGCCTGGGGACTCCTCCGGCGGGG
GCGCTGGGGGCGGGCTGCCGTCCCCTGGGGAGCAGGAGCTGAGCCGGCGCTTGCAGCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTC
CGCTGCCGCGCTCCTGGAGCCCCAAGGACAAATACAACTACATTGGTCTCTCCCAGGGCAACCTCCGCGTCCACTACAAAGGTCATGGCA
AAAATCACAAAGATGCGGCCTCAGTGCGTGCCACCCACCCCATACCTGCTGCCTGTGGCATTTATTACTTTGAAGTGAAGATTGTCAGCA
AAGGAAGAGATGGTGAGCTGAAGAGACGCCTGAAAGCTGAGAAGAAAGTAGCAGAGAAGGAGGCCAAACAGAAAGAGCTCAGTGAGAAAC
AGCTAAGCCAAGCCACTGCTGCTGCCACCAACCACACCACTGATAATGGTGTGGGTCCTGAGGAAGAGAGCGTGGACCCAAATCAATACT
ACAAAATCCGCAGTCAAGCAATTCATCAGCTGAAGGTCAATGGGGAAGACCCATACCCACACAAGTTCCATGTAGACATCTCACTCACTG
ACTTCATCCAAAAATATAGTCACCTGCAGCCTGGGGATCACCTGACTGACATCACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAG
CTTCTGGGGGAAAGCTCATCTTCTATGATCTTCGAGGAGAGGGGGTGAAGTTGCAAGTCATGGCCAATTCCAGAAATTATAAATCAGAAG
AAGAATTTATTCATATTAATAACAAACTGCGTCGGGGAGACATAATTGGAGTTCAGGGGAATCCTGGTAAAACCAAGAAGGGTGAGCTGA
GCATCATTCCGTATGAGATCACACTGCTGTCTCCCTGTTTGCATATGTTACCTCATCTTCACTTTGGCCTCAAAGACAAGGAAACAAGGT
ATCGCCAGAGATACTTGGACTTGATCCTGAATGACTTTGTGAGGCAGAAATTTATCATCCGCTCTAAGATCATCACATATATAAGAAGTT
TCTTAGATGAGCTGGGATTCCTAGAGATTGAAACTCCCATGATGAACATCATCCCAGGGGGAGCCGTGGCCAAGCCTTTCATCACTTATC
ACAACGAGCTGGACATGAACTTATATATGAGAATTGCTCCAGAACTCTATCATAAGATGCTTGTGGTTGGTGGCATCGACCGGGTTTATG
AAATTGGACGCCAGTTCCGGAATGAGGGGATTGATTTGACGCACAATCCTGAGTTCACCACCTGTGAGTTCTACATGGCCTATGCAGACT
ATCACGATCTCATGGAAATCACGGAGAAGATGGTTTCAGGGATGGTGAAGCATATTACAGGCAGTTACAAGGTCACCTACCACCCAGATG
GCCCAGAGGGCCAAGCCTACGATGTTGACTTCACCCCACCCTTCCGGCGAATCAACATGGTAGAAGAGCTTGAGAAAGCCCTGGGGATGA
AGCTGCCAGAAACGAACCTCTTTGAAACTGAAGAAACTCGCAAAATTCTTGATGATATCTGTGTGGCAAAAGCTGTTGAATGCCCTCCAC
CTCGGACCACAGCCAGGCTCCTTGACAAGCTTGTTGGGGAGTTCCTGGAAGTGACTTGCATCAATCCTACATTCATCTGTGATCACCCAC
AGATAATGAGCCCTTTGGCTAAATGGCACCGCTCTAAAGAGGGTCTGACTGAGCGCTTTGAGCTGTTTGTCATGAAGAAAGAGATATGCA
ATGCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCTTTTTGAAGAACAGGCCAAGGCCAAGGCTGCAGGTGATGATGAGGCCA
TGTTCATAGATGAAAACTTCTGTACTGCCCTGGAATATGGGCTGCCCCCCACAGCTGGCTGGGGCATGGGCATTGATCGAGTCGCCATGT
TTCTCACGGACTCCAACAACATCAAGGAAGTACTTCTGTTTCCTGCCATGAAACCCGAAGACAAGAAGGAGAATGTAGCAACCACTGATA
CACTGGAAAGCACAACAGTTGGCACTTCTGTCTAGAAAATAATAATTGCAAGTTGTATAACTCAGGCGTCTTTGCATTTCTGCGAAAGAT
CAAGGTCTGCAAGGGAATTCTTGTGTGCTGCTTTCCATTTGACACCGCAGTTCTGTTCAGCCATCAGAAGAGAGACAAGGAATTAAAAAT

>In-frame_ENST00000317506_ENST00000302445_TCGA-61-2008-02A_RANBP10_chr16_67839331_-_KARS_chr16_75675621_length(amino acids)=714AA_start in transcript=50_stop in transcript=2194
MSGADLVPLLPAPSDTIVAPSKMAAATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPKDKYNYIGL
SQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGELKRRLKAEKKVAEKEAKQKELSEKQLSQATAAATNHTTDNG
VGPEEESVDPNQYYKIRSQAIHQLKVNGEDPYPHKFHVDISLTDFIQKYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVK
LQVMANSRNYKSEEEFIHINNKLRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQK
FIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP
EFTTCEFYMAYADYHDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVEELEKALGMKLPETNLFETEETRKIL
DDICVAKAVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFE

--------------------------------------------------------------
>In-frame_ENST00000448631_ENST00000319410_TCGA-61-2008-02A_RANBP10_chr16_67839331_-_KARS_chr16_75675621_length(transcript)=2274nt_BP=371nt
GACACAATAGTAGCTCCCTCCAAGATGGCGGCAGCGACGGCAGACCCGGGAGCTGGGAACCCGCAGCCTGGGGACTCCTCCGGCGGGGGC
GCTGGGGGCGGGCTGCCGTCCCCTGGGGAGCAGGAGCTGAGCCGGCGCTTGCAGCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTCCG
CTGCCGCGCTCCTGGAGCCCCAAGGACAAATACAACTACATTGGTCTCTCCCAGGGCAACCTCCGCGTCCACTACAAAGGTCATGGCAAA
AATCACAAAGATGCGGCCTCAGTGCGTGCCACCCACCCCATACCTGCTGCCTGTGGCATTTATTACTTTGAAGTGAAGATTGTCAGCAAA
GGAAGAGATGGTGAGCTGAAGAGACGCCTGAAAGCTGAGAAGAAAGTAGCAGAGAAGGAGGCCAAACAGAAAGAGCTCAGTGAGAAACAG
CTAAGCCAAGCCACTGCTGCTGCCACCAACCACACCACTGATAATGGTGTGGGTCCTGAGGAAGAGAGCGTGGACCCAAATCAATACTAC
AAAATCCGCAGTCAAGCAATTCATCAGCTGAAGGTCAATGGGGAAGACCCATACCCACACAAGTTCCATGTAGACATCTCACTCACTGAC
TTCATCCAAAAATATAGTCACCTGCAGCCTGGGGATCACCTGACTGACATCACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAGCT
TCTGGGGGAAAGCTCATCTTCTATGATCTTCGAGGAGAGGGGGTGAAGTTGCAAGTCATGGCCAATTCCAGAAATTATAAATCAGAAGAA
GAATTTATTCATATTAATAACAAACTGCGTCGGGGAGACATAATTGGAGTTCAGGGGAATCCTGGTAAAACCAAGAAGGGTGAGCTGAGC
ATCATTCCGTATGAGATCACACTGCTGTCTCCCTGTTTGCATATGTTACCTCATCTTCACTTTGGCCTCAAAGACAAGGAAACAAGGTAT
CGCCAGAGATACTTGGACTTGATCCTGAATGACTTTGTGAGGCAGAAATTTATCATCCGCTCTAAGATCATCACATATATAAGAAGTTTC
TTAGATGAGCTGGGATTCCTAGAGATTGAAACTCCCATGATGAACATCATCCCAGGGGGAGCCGTGGCCAAGCCTTTCATCACTTATCAC
AACGAGCTGGACATGAACTTATATATGAGAATTGCTCCAGAACTCTATCATAAGATGCTTGTGGTTGGTGGCATCGACCGGGTTTATGAA
ATTGGACGCCAGTTCCGGAATGAGGGGATTGATTTGACGCACAATCCTGAGTTCACCACCTGTGAGTTCTACATGGCCTATGCAGACTAT
CACGATCTCATGGAAATCACGGAGAAGATGGTTTCAGGGATGGTGAAGCATATTACAGGCAGTTACAAGGTCACCTACCACCCAGATGGC
CCAGAGGGCCAAGCCTACGATGTTGACTTCACCCCACCCTTCCGGCGAATCAACATGGTAGAAGAGCTTGAGAAAGCCCTGGGGATGAAG
CTGCCAGAAACGAACCTCTTTGAAACTGAAGAAACTCGCAAAATTCTTGATGATATCTGTGTGGCAAAAGCTGTTGAATGCCCTCCACCT
CGGACCACAGCCAGGCTCCTTGACAAGCTTGTTGGGGAGTTCCTGGAAGTGACTTGCATCAATCCTACATTCATCTGTGATCACCCACAG
ATAATGAGCCCTTTGGCTAAATGGCACCGCTCTAAAGAGGGTCTGACTGAGCGCTTTGAGCTGTTTGTCATGAAGAAAGAGATATGCAAT
GCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCTTTTTGAAGAACAGGCCAAGGCCAAGGCTGCAGGTGATGATGAGGCCATG
TTCATAGATGAAAACTTCTGTACTGCCCTGGAATATGGGCTGCCCCCCACAGCTGGCTGGGGCATGGGCATTGATCGAGTCGCCATGTTT
CTCACGGACTCCAACAACATCAAGGAAGTACTTCTGTTTCCTGCCATGAAACCCGAAGACAAGAAGGAGAATGTAGCAACCACTGATACA
CTGGAAAGCACAACAGTTGGCACTTCTGTCTAGAAAATAATAATTGCAAGTTGTATAACTCAGGCGTCTTTGCATTTCTGCGAAAGATCA
AGGTCTGCAAGGGAATTCTTGTGTGCTGCTTTCCATTTGACACCGCAGTTCTGTTCAGCCATCAGAAGAGAGACAAGGAATTAAAAATTT

>In-frame_ENST00000448631_ENST00000319410_TCGA-61-2008-02A_RANBP10_chr16_67839331_-_KARS_chr16_75675621_length(amino acids)=692AA_start in transcript=24_stop in transcript=2102
MAAATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPKDKYNYIGLSQGNLRVHYKGHGKNHKDAASV
RATHPIPAACGIYYFEVKIVSKGRDGELKRRLKAEKKVAEKEAKQKELSEKQLSQATAAATNHTTDNGVGPEEESVDPNQYYKIRSQAIH
QLKVNGEDPYPHKFHVDISLTDFIQKYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNK
LRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLE
IETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITE
KMVSGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD
KLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCT

--------------------------------------------------------------
>In-frame_ENST00000448631_ENST00000302445_TCGA-61-2008-02A_RANBP10_chr16_67839331_-_KARS_chr16_75675621_length(transcript)=2274nt_BP=371nt
GACACAATAGTAGCTCCCTCCAAGATGGCGGCAGCGACGGCAGACCCGGGAGCTGGGAACCCGCAGCCTGGGGACTCCTCCGGCGGGGGC
GCTGGGGGCGGGCTGCCGTCCCCTGGGGAGCAGGAGCTGAGCCGGCGCTTGCAGCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTCCG
CTGCCGCGCTCCTGGAGCCCCAAGGACAAATACAACTACATTGGTCTCTCCCAGGGCAACCTCCGCGTCCACTACAAAGGTCATGGCAAA
AATCACAAAGATGCGGCCTCAGTGCGTGCCACCCACCCCATACCTGCTGCCTGTGGCATTTATTACTTTGAAGTGAAGATTGTCAGCAAA
GGAAGAGATGGTGAGCTGAAGAGACGCCTGAAAGCTGAGAAGAAAGTAGCAGAGAAGGAGGCCAAACAGAAAGAGCTCAGTGAGAAACAG
CTAAGCCAAGCCACTGCTGCTGCCACCAACCACACCACTGATAATGGTGTGGGTCCTGAGGAAGAGAGCGTGGACCCAAATCAATACTAC
AAAATCCGCAGTCAAGCAATTCATCAGCTGAAGGTCAATGGGGAAGACCCATACCCACACAAGTTCCATGTAGACATCTCACTCACTGAC
TTCATCCAAAAATATAGTCACCTGCAGCCTGGGGATCACCTGACTGACATCACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAGCT
TCTGGGGGAAAGCTCATCTTCTATGATCTTCGAGGAGAGGGGGTGAAGTTGCAAGTCATGGCCAATTCCAGAAATTATAAATCAGAAGAA
GAATTTATTCATATTAATAACAAACTGCGTCGGGGAGACATAATTGGAGTTCAGGGGAATCCTGGTAAAACCAAGAAGGGTGAGCTGAGC
ATCATTCCGTATGAGATCACACTGCTGTCTCCCTGTTTGCATATGTTACCTCATCTTCACTTTGGCCTCAAAGACAAGGAAACAAGGTAT
CGCCAGAGATACTTGGACTTGATCCTGAATGACTTTGTGAGGCAGAAATTTATCATCCGCTCTAAGATCATCACATATATAAGAAGTTTC
TTAGATGAGCTGGGATTCCTAGAGATTGAAACTCCCATGATGAACATCATCCCAGGGGGAGCCGTGGCCAAGCCTTTCATCACTTATCAC
AACGAGCTGGACATGAACTTATATATGAGAATTGCTCCAGAACTCTATCATAAGATGCTTGTGGTTGGTGGCATCGACCGGGTTTATGAA
ATTGGACGCCAGTTCCGGAATGAGGGGATTGATTTGACGCACAATCCTGAGTTCACCACCTGTGAGTTCTACATGGCCTATGCAGACTAT
CACGATCTCATGGAAATCACGGAGAAGATGGTTTCAGGGATGGTGAAGCATATTACAGGCAGTTACAAGGTCACCTACCACCCAGATGGC
CCAGAGGGCCAAGCCTACGATGTTGACTTCACCCCACCCTTCCGGCGAATCAACATGGTAGAAGAGCTTGAGAAAGCCCTGGGGATGAAG
CTGCCAGAAACGAACCTCTTTGAAACTGAAGAAACTCGCAAAATTCTTGATGATATCTGTGTGGCAAAAGCTGTTGAATGCCCTCCACCT
CGGACCACAGCCAGGCTCCTTGACAAGCTTGTTGGGGAGTTCCTGGAAGTGACTTGCATCAATCCTACATTCATCTGTGATCACCCACAG
ATAATGAGCCCTTTGGCTAAATGGCACCGCTCTAAAGAGGGTCTGACTGAGCGCTTTGAGCTGTTTGTCATGAAGAAAGAGATATGCAAT
GCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCTTTTTGAAGAACAGGCCAAGGCCAAGGCTGCAGGTGATGATGAGGCCATG
TTCATAGATGAAAACTTCTGTACTGCCCTGGAATATGGGCTGCCCCCCACAGCTGGCTGGGGCATGGGCATTGATCGAGTCGCCATGTTT
CTCACGGACTCCAACAACATCAAGGAAGTACTTCTGTTTCCTGCCATGAAACCCGAAGACAAGAAGGAGAATGTAGCAACCACTGATACA
CTGGAAAGCACAACAGTTGGCACTTCTGTCTAGAAAATAATAATTGCAAGTTGTATAACTCAGGCGTCTTTGCATTTCTGCGAAAGATCA
AGGTCTGCAAGGGAATTCTTGTGTGCTGCTTTCCATTTGACACCGCAGTTCTGTTCAGCCATCAGAAGAGAGACAAGGAATTAAAAATTT

>In-frame_ENST00000448631_ENST00000302445_TCGA-61-2008-02A_RANBP10_chr16_67839331_-_KARS_chr16_75675621_length(amino acids)=692AA_start in transcript=24_stop in transcript=2102
MAAATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPKDKYNYIGLSQGNLRVHYKGHGKNHKDAASV
RATHPIPAACGIYYFEVKIVSKGRDGELKRRLKAEKKVAEKEAKQKELSEKQLSQATAAATNHTTDNGVGPEEESVDPNQYYKIRSQAIH
QLKVNGEDPYPHKFHVDISLTDFIQKYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNK
LRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLE
IETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITE
KMVSGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD
KLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCT

--------------------------------------------------------------
>In-frame_ENST00000602677_ENST00000319410_TCGA-61-2008-02A_RANBP10_chr16_67839331_-_KARS_chr16_75675621_length(transcript)=2274nt_BP=371nt
GACACAATAGTAGCTCCCTCCAAGATGGCGGCAGCGACGGCAGACCCGGGAGCTGGGAACCCGCAGCCTGGGGACTCCTCCGGCGGGGGC
GCTGGGGGCGGGCTGCCGTCCCCTGGGGAGCAGGAGCTGAGCCGGCGCTTGCAGCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTCCG
CTGCCGCGCTCCTGGAGCCCCAAGGACAAATACAACTACATTGGTCTCTCCCAGGGCAACCTCCGCGTCCACTACAAAGGTCATGGCAAA
AATCACAAAGATGCGGCCTCAGTGCGTGCCACCCACCCCATACCTGCTGCCTGTGGCATTTATTACTTTGAAGTGAAGATTGTCAGCAAA
GGAAGAGATGGTGAGCTGAAGAGACGCCTGAAAGCTGAGAAGAAAGTAGCAGAGAAGGAGGCCAAACAGAAAGAGCTCAGTGAGAAACAG
CTAAGCCAAGCCACTGCTGCTGCCACCAACCACACCACTGATAATGGTGTGGGTCCTGAGGAAGAGAGCGTGGACCCAAATCAATACTAC
AAAATCCGCAGTCAAGCAATTCATCAGCTGAAGGTCAATGGGGAAGACCCATACCCACACAAGTTCCATGTAGACATCTCACTCACTGAC
TTCATCCAAAAATATAGTCACCTGCAGCCTGGGGATCACCTGACTGACATCACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAGCT
TCTGGGGGAAAGCTCATCTTCTATGATCTTCGAGGAGAGGGGGTGAAGTTGCAAGTCATGGCCAATTCCAGAAATTATAAATCAGAAGAA
GAATTTATTCATATTAATAACAAACTGCGTCGGGGAGACATAATTGGAGTTCAGGGGAATCCTGGTAAAACCAAGAAGGGTGAGCTGAGC
ATCATTCCGTATGAGATCACACTGCTGTCTCCCTGTTTGCATATGTTACCTCATCTTCACTTTGGCCTCAAAGACAAGGAAACAAGGTAT
CGCCAGAGATACTTGGACTTGATCCTGAATGACTTTGTGAGGCAGAAATTTATCATCCGCTCTAAGATCATCACATATATAAGAAGTTTC
TTAGATGAGCTGGGATTCCTAGAGATTGAAACTCCCATGATGAACATCATCCCAGGGGGAGCCGTGGCCAAGCCTTTCATCACTTATCAC
AACGAGCTGGACATGAACTTATATATGAGAATTGCTCCAGAACTCTATCATAAGATGCTTGTGGTTGGTGGCATCGACCGGGTTTATGAA
ATTGGACGCCAGTTCCGGAATGAGGGGATTGATTTGACGCACAATCCTGAGTTCACCACCTGTGAGTTCTACATGGCCTATGCAGACTAT
CACGATCTCATGGAAATCACGGAGAAGATGGTTTCAGGGATGGTGAAGCATATTACAGGCAGTTACAAGGTCACCTACCACCCAGATGGC
CCAGAGGGCCAAGCCTACGATGTTGACTTCACCCCACCCTTCCGGCGAATCAACATGGTAGAAGAGCTTGAGAAAGCCCTGGGGATGAAG
CTGCCAGAAACGAACCTCTTTGAAACTGAAGAAACTCGCAAAATTCTTGATGATATCTGTGTGGCAAAAGCTGTTGAATGCCCTCCACCT
CGGACCACAGCCAGGCTCCTTGACAAGCTTGTTGGGGAGTTCCTGGAAGTGACTTGCATCAATCCTACATTCATCTGTGATCACCCACAG
ATAATGAGCCCTTTGGCTAAATGGCACCGCTCTAAAGAGGGTCTGACTGAGCGCTTTGAGCTGTTTGTCATGAAGAAAGAGATATGCAAT
GCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCTTTTTGAAGAACAGGCCAAGGCCAAGGCTGCAGGTGATGATGAGGCCATG
TTCATAGATGAAAACTTCTGTACTGCCCTGGAATATGGGCTGCCCCCCACAGCTGGCTGGGGCATGGGCATTGATCGAGTCGCCATGTTT
CTCACGGACTCCAACAACATCAAGGAAGTACTTCTGTTTCCTGCCATGAAACCCGAAGACAAGAAGGAGAATGTAGCAACCACTGATACA
CTGGAAAGCACAACAGTTGGCACTTCTGTCTAGAAAATAATAATTGCAAGTTGTATAACTCAGGCGTCTTTGCATTTCTGCGAAAGATCA
AGGTCTGCAAGGGAATTCTTGTGTGCTGCTTTCCATTTGACACCGCAGTTCTGTTCAGCCATCAGAAGAGAGACAAGGAATTAAAAATTT

>In-frame_ENST00000602677_ENST00000319410_TCGA-61-2008-02A_RANBP10_chr16_67839331_-_KARS_chr16_75675621_length(amino acids)=692AA_start in transcript=24_stop in transcript=2102
MAAATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPKDKYNYIGLSQGNLRVHYKGHGKNHKDAASV
RATHPIPAACGIYYFEVKIVSKGRDGELKRRLKAEKKVAEKEAKQKELSEKQLSQATAAATNHTTDNGVGPEEESVDPNQYYKIRSQAIH
QLKVNGEDPYPHKFHVDISLTDFIQKYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNK
LRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLE
IETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITE
KMVSGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD
KLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCT

--------------------------------------------------------------
>In-frame_ENST00000602677_ENST00000302445_TCGA-61-2008-02A_RANBP10_chr16_67839331_-_KARS_chr16_75675621_length(transcript)=2274nt_BP=371nt
GACACAATAGTAGCTCCCTCCAAGATGGCGGCAGCGACGGCAGACCCGGGAGCTGGGAACCCGCAGCCTGGGGACTCCTCCGGCGGGGGC
GCTGGGGGCGGGCTGCCGTCCCCTGGGGAGCAGGAGCTGAGCCGGCGCTTGCAGCGCCTGTATCCCGCGGTCAACCAGCAAGAGACTCCG
CTGCCGCGCTCCTGGAGCCCCAAGGACAAATACAACTACATTGGTCTCTCCCAGGGCAACCTCCGCGTCCACTACAAAGGTCATGGCAAA
AATCACAAAGATGCGGCCTCAGTGCGTGCCACCCACCCCATACCTGCTGCCTGTGGCATTTATTACTTTGAAGTGAAGATTGTCAGCAAA
GGAAGAGATGGTGAGCTGAAGAGACGCCTGAAAGCTGAGAAGAAAGTAGCAGAGAAGGAGGCCAAACAGAAAGAGCTCAGTGAGAAACAG
CTAAGCCAAGCCACTGCTGCTGCCACCAACCACACCACTGATAATGGTGTGGGTCCTGAGGAAGAGAGCGTGGACCCAAATCAATACTAC
AAAATCCGCAGTCAAGCAATTCATCAGCTGAAGGTCAATGGGGAAGACCCATACCCACACAAGTTCCATGTAGACATCTCACTCACTGAC
TTCATCCAAAAATATAGTCACCTGCAGCCTGGGGATCACCTGACTGACATCACCTTAAAGGTGGCAGGTAGGATCCATGCCAAAAGAGCT
TCTGGGGGAAAGCTCATCTTCTATGATCTTCGAGGAGAGGGGGTGAAGTTGCAAGTCATGGCCAATTCCAGAAATTATAAATCAGAAGAA
GAATTTATTCATATTAATAACAAACTGCGTCGGGGAGACATAATTGGAGTTCAGGGGAATCCTGGTAAAACCAAGAAGGGTGAGCTGAGC
ATCATTCCGTATGAGATCACACTGCTGTCTCCCTGTTTGCATATGTTACCTCATCTTCACTTTGGCCTCAAAGACAAGGAAACAAGGTAT
CGCCAGAGATACTTGGACTTGATCCTGAATGACTTTGTGAGGCAGAAATTTATCATCCGCTCTAAGATCATCACATATATAAGAAGTTTC
TTAGATGAGCTGGGATTCCTAGAGATTGAAACTCCCATGATGAACATCATCCCAGGGGGAGCCGTGGCCAAGCCTTTCATCACTTATCAC
AACGAGCTGGACATGAACTTATATATGAGAATTGCTCCAGAACTCTATCATAAGATGCTTGTGGTTGGTGGCATCGACCGGGTTTATGAA
ATTGGACGCCAGTTCCGGAATGAGGGGATTGATTTGACGCACAATCCTGAGTTCACCACCTGTGAGTTCTACATGGCCTATGCAGACTAT
CACGATCTCATGGAAATCACGGAGAAGATGGTTTCAGGGATGGTGAAGCATATTACAGGCAGTTACAAGGTCACCTACCACCCAGATGGC
CCAGAGGGCCAAGCCTACGATGTTGACTTCACCCCACCCTTCCGGCGAATCAACATGGTAGAAGAGCTTGAGAAAGCCCTGGGGATGAAG
CTGCCAGAAACGAACCTCTTTGAAACTGAAGAAACTCGCAAAATTCTTGATGATATCTGTGTGGCAAAAGCTGTTGAATGCCCTCCACCT
CGGACCACAGCCAGGCTCCTTGACAAGCTTGTTGGGGAGTTCCTGGAAGTGACTTGCATCAATCCTACATTCATCTGTGATCACCCACAG
ATAATGAGCCCTTTGGCTAAATGGCACCGCTCTAAAGAGGGTCTGACTGAGCGCTTTGAGCTGTTTGTCATGAAGAAAGAGATATGCAAT
GCGTATACTGAGCTGAATGATCCCATGCGGCAGCGGCAGCTTTTTGAAGAACAGGCCAAGGCCAAGGCTGCAGGTGATGATGAGGCCATG
TTCATAGATGAAAACTTCTGTACTGCCCTGGAATATGGGCTGCCCCCCACAGCTGGCTGGGGCATGGGCATTGATCGAGTCGCCATGTTT
CTCACGGACTCCAACAACATCAAGGAAGTACTTCTGTTTCCTGCCATGAAACCCGAAGACAAGAAGGAGAATGTAGCAACCACTGATACA
CTGGAAAGCACAACAGTTGGCACTTCTGTCTAGAAAATAATAATTGCAAGTTGTATAACTCAGGCGTCTTTGCATTTCTGCGAAAGATCA
AGGTCTGCAAGGGAATTCTTGTGTGCTGCTTTCCATTTGACACCGCAGTTCTGTTCAGCCATCAGAAGAGAGACAAGGAATTAAAAATTT

>In-frame_ENST00000602677_ENST00000302445_TCGA-61-2008-02A_RANBP10_chr16_67839331_-_KARS_chr16_75675621_length(amino acids)=692AA_start in transcript=24_stop in transcript=2102
MAAATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPKDKYNYIGLSQGNLRVHYKGHGKNHKDAASV
RATHPIPAACGIYYFEVKIVSKGRDGELKRRLKAEKKVAEKEAKQKELSEKQLSQATAAATNHTTDNGVGPEEESVDPNQYYKIRSQAIH
QLKVNGEDPYPHKFHVDISLTDFIQKYSHLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNK
LRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLE
IETPMMNIIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITE
KMVSGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVEELEKALGMKLPETNLFETEETRKILDDICVAKAVECPPPRTTARLLD
KLVGEFLEVTCINPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAMFIDENFCT

--------------------------------------------------------------

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Fusion Gene PPI Analysis for RANBP10-KARS


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for RANBP10-KARS


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
TgeneKARSQ15046DB00123L-LysineSmall moleculeApproved|Nutraceutical
TgeneKARSQ15046DB00123L-LysineSmall moleculeApproved|Nutraceutical
TgeneKARSQ15046DB00123L-LysineSmall moleculeApproved|Nutraceutical

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Related Diseases for RANBP10-KARS


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneRANBP10C0024623Malignant neoplasm of stomach1CTD_human
HgeneRANBP10C0038356Stomach Neoplasms1CTD_human
HgeneRANBP10C0235874Disease Exacerbation1CTD_human
HgeneRANBP10C1708349Hereditary Diffuse Gastric Cancer1CTD_human