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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:RARA-SEPT9 (FusionGDB2 ID:71858)

Fusion Gene Summary for RARA-SEPT9

check button Fusion gene summary
Fusion gene informationFusion gene name: RARA-SEPT9
Fusion gene ID: 71858
HgeneTgene
Gene symbol

RARA

SEPT9

Gene ID

5914

10801

Gene nameretinoic acid receptor alphaseptin 9
SynonymsNR1B1|RARAF17q25|MSF|MSF1|NAPB|PNUTL4|SEPT9|SINT1|SeptD1
Cytomap

17q21.2

17q25.3

Type of geneprotein-codingprotein-coding
Descriptionretinoic acid receptor alphaRAR-alphanuclear receptor subfamily 1 group B member 1nucleophosmin-retinoic acid receptor alpha fusion protein NPM-RAR long formretinoic acid nuclear receptor alpha variant 1retinoic acid nuclear receptor alpha variant 2septin-9MLL septin-like fusion protein MSF-AOv/Br septinovarian/breast septinseptin D1
Modification date2020032720200328
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000254066, ENST00000394089, 
ENST00000425707, ENST00000394086, 
ENST00000394081, ENST00000420042, 
ENST00000427177, ENST00000591198, 
ENST00000449803, ENST00000431235, 
ENST00000329047, ENST00000590294, 
ENST00000588690, ENST00000423034, 
ENST00000427674, ENST00000592420, 
ENST00000585930, ENST00000541152, 
ENST00000592481, ENST00000591088, 
ENST00000592951, ENST00000590917, 
ENST00000427180, 
Fusion gene scores* DoF score47 X 22 X 8=827228 X 12 X 9=3024
# samples 7427
** MAII scorelog2(74/8272*10)=-3.48263900979862
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(27/3024*10)=-3.48542682717024
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: RARA [Title/Abstract] AND SEPT9 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointRARA(38487648)-SEPT9(75483506), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneRARA

GO:0007165

signal transduction

2825025

HgeneRARA

GO:0030853

negative regulation of granulocyte differentiation

19917671

HgeneRARA

GO:0032689

negative regulation of interferon-gamma production

18416830

HgeneRARA

GO:0032720

negative regulation of tumor necrosis factor production

18416830

HgeneRARA

GO:0032736

positive regulation of interleukin-13 production

18416830

HgeneRARA

GO:0032753

positive regulation of interleukin-4 production

18416830

HgeneRARA

GO:0032754

positive regulation of interleukin-5 production

18416830

HgeneRARA

GO:0045630

positive regulation of T-helper 2 cell differentiation

18416830

HgeneRARA

GO:0045892

negative regulation of transcription, DNA-templated

20080953

HgeneRARA

GO:0045893

positive regulation of transcription, DNA-templated

18845237|19850744|20080953

HgeneRARA

GO:0045944

positive regulation of transcription by RNA polymerase II

19850744|21131358

HgeneRARA

GO:0071300

cellular response to retinoic acid

19917671

HgeneRARA

GO:0071391

cellular response to estrogen stimulus

20080953


check buttonFusion gene breakpoints across RARA (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across SEPT9 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4BRCATCGA-BH-A202-01ARARAchr17

38487648

+SEPT9chr17

75483506

+


Top

Fusion Gene ORF analysis for RARA-SEPT9

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000254066ENST00000427177RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000254066ENST00000591198RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000254066ENST00000449803RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000254066ENST00000431235RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000254066ENST00000329047RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000254066ENST00000590294RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000254066ENST00000588690RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000254066ENST00000423034RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000254066ENST00000427674RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-intronENST00000254066ENST00000592420RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-intronENST00000254066ENST00000585930RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-intronENST00000254066ENST00000541152RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-3UTRENST00000254066ENST00000592481RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-3UTRENST00000254066ENST00000591088RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-3UTRENST00000254066ENST00000592951RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-3UTRENST00000254066ENST00000590917RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-3UTRENST00000254066ENST00000427180RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000394089ENST00000427177RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000394089ENST00000591198RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000394089ENST00000449803RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000394089ENST00000431235RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000394089ENST00000329047RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000394089ENST00000590294RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000394089ENST00000588690RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000394089ENST00000423034RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000394089ENST00000427674RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-intronENST00000394089ENST00000592420RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-intronENST00000394089ENST00000585930RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-intronENST00000394089ENST00000541152RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-3UTRENST00000394089ENST00000592481RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-3UTRENST00000394089ENST00000591088RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-3UTRENST00000394089ENST00000592951RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-3UTRENST00000394089ENST00000590917RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-3UTRENST00000394089ENST00000427180RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000425707ENST00000427177RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000425707ENST00000591198RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000425707ENST00000449803RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000425707ENST00000431235RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000425707ENST00000329047RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000425707ENST00000590294RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000425707ENST00000588690RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000425707ENST00000423034RARAchr17

38487648

+SEPT9chr17

75483506

+
In-frameENST00000425707ENST00000427674RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-intronENST00000425707ENST00000592420RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-intronENST00000425707ENST00000585930RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-intronENST00000425707ENST00000541152RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-3UTRENST00000425707ENST00000592481RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-3UTRENST00000425707ENST00000591088RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-3UTRENST00000425707ENST00000592951RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-3UTRENST00000425707ENST00000590917RARAchr17

38487648

+SEPT9chr17

75483506

+
5CDS-3UTRENST00000425707ENST00000427180RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394086ENST00000427177RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394086ENST00000591198RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394086ENST00000449803RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394086ENST00000431235RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394086ENST00000329047RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394086ENST00000590294RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394086ENST00000588690RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394086ENST00000423034RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394086ENST00000427674RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-intronENST00000394086ENST00000592420RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-intronENST00000394086ENST00000585930RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-intronENST00000394086ENST00000541152RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3UTRENST00000394086ENST00000592481RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3UTRENST00000394086ENST00000591088RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3UTRENST00000394086ENST00000592951RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3UTRENST00000394086ENST00000590917RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3UTRENST00000394086ENST00000427180RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394081ENST00000427177RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394081ENST00000591198RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394081ENST00000449803RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394081ENST00000431235RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394081ENST00000329047RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394081ENST00000590294RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394081ENST00000588690RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394081ENST00000423034RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000394081ENST00000427674RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-intronENST00000394081ENST00000592420RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-intronENST00000394081ENST00000585930RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-intronENST00000394081ENST00000541152RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3UTRENST00000394081ENST00000592481RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3UTRENST00000394081ENST00000591088RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3UTRENST00000394081ENST00000592951RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3UTRENST00000394081ENST00000590917RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3UTRENST00000394081ENST00000427180RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000420042ENST00000427177RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000420042ENST00000591198RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000420042ENST00000449803RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000420042ENST00000431235RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000420042ENST00000329047RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000420042ENST00000590294RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000420042ENST00000588690RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000420042ENST00000423034RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3CDSENST00000420042ENST00000427674RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-intronENST00000420042ENST00000592420RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-intronENST00000420042ENST00000585930RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-intronENST00000420042ENST00000541152RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3UTRENST00000420042ENST00000592481RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3UTRENST00000420042ENST00000591088RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3UTRENST00000420042ENST00000592951RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3UTRENST00000420042ENST00000590917RARAchr17

38487648

+SEPT9chr17

75483506

+
intron-3UTRENST00000420042ENST00000427180RARAchr17

38487648

+SEPT9chr17

75483506

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000254066RARAchr1738487648+ENST00000427177SEPT9chr1775483506+34156334401480346
ENST00000254066RARAchr1738487648+ENST00000591198SEPT9chr1775483506+18526334401480346
ENST00000254066RARAchr1738487648+ENST00000449803SEPT9chr1775483506+34156334401480346
ENST00000254066RARAchr1738487648+ENST00000431235SEPT9chr1775483506+34196334401480346
ENST00000254066RARAchr1738487648+ENST00000329047SEPT9chr1775483506+34156334401480346
ENST00000254066RARAchr1738487648+ENST00000590294SEPT9chr1775483506+17786334401480346
ENST00000254066RARAchr1738487648+ENST00000588690SEPT9chr1775483506+26546334401480346
ENST00000254066RARAchr1738487648+ENST00000423034SEPT9chr1775483506+34176334401480346
ENST00000254066RARAchr1738487648+ENST00000427674SEPT9chr1775483506+34176334401480346
ENST00000394089RARAchr1738487648+ENST00000427177SEPT9chr1775483506+34907085151555346
ENST00000394089RARAchr1738487648+ENST00000591198SEPT9chr1775483506+19277085151555346
ENST00000394089RARAchr1738487648+ENST00000449803SEPT9chr1775483506+34907085151555346
ENST00000394089RARAchr1738487648+ENST00000431235SEPT9chr1775483506+34947085151555346
ENST00000394089RARAchr1738487648+ENST00000329047SEPT9chr1775483506+34907085151555346
ENST00000394089RARAchr1738487648+ENST00000590294SEPT9chr1775483506+18537085151555346
ENST00000394089RARAchr1738487648+ENST00000588690SEPT9chr1775483506+27297085151555346
ENST00000394089RARAchr1738487648+ENST00000423034SEPT9chr1775483506+34927085151555346
ENST00000394089RARAchr1738487648+ENST00000427674SEPT9chr1775483506+34927085151555346
ENST00000425707RARAchr1738487648+ENST00000427177SEPT9chr1775483506+34867045111551346
ENST00000425707RARAchr1738487648+ENST00000591198SEPT9chr1775483506+19237045111551346
ENST00000425707RARAchr1738487648+ENST00000449803SEPT9chr1775483506+34867045111551346
ENST00000425707RARAchr1738487648+ENST00000431235SEPT9chr1775483506+34907045111551346
ENST00000425707RARAchr1738487648+ENST00000329047SEPT9chr1775483506+34867045111551346
ENST00000425707RARAchr1738487648+ENST00000590294SEPT9chr1775483506+18497045111551346
ENST00000425707RARAchr1738487648+ENST00000588690SEPT9chr1775483506+27257045111551346
ENST00000425707RARAchr1738487648+ENST00000423034SEPT9chr1775483506+34887045111551346
ENST00000425707RARAchr1738487648+ENST00000427674SEPT9chr1775483506+34887045111551346

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000254066ENST00000427177RARAchr1738487648+SEPT9chr1775483506+0.00489550.99510455
ENST00000254066ENST00000591198RARAchr1738487648+SEPT9chr1775483506+0.0069106780.9930894
ENST00000254066ENST00000449803RARAchr1738487648+SEPT9chr1775483506+0.00489550.99510455
ENST00000254066ENST00000431235RARAchr1738487648+SEPT9chr1775483506+0.0048677220.99513227
ENST00000254066ENST00000329047RARAchr1738487648+SEPT9chr1775483506+0.00489550.99510455
ENST00000254066ENST00000590294RARAchr1738487648+SEPT9chr1775483506+0.0064128450.99358714
ENST00000254066ENST00000588690RARAchr1738487648+SEPT9chr1775483506+0.0066307530.9933693
ENST00000254066ENST00000423034RARAchr1738487648+SEPT9chr1775483506+0.0048509730.9951491
ENST00000254066ENST00000427674RARAchr1738487648+SEPT9chr1775483506+0.0048509730.9951491
ENST00000394089ENST00000427177RARAchr1738487648+SEPT9chr1775483506+0.0049011320.9950989
ENST00000394089ENST00000591198RARAchr1738487648+SEPT9chr1775483506+0.0064732680.9935267
ENST00000394089ENST00000449803RARAchr1738487648+SEPT9chr1775483506+0.0049011320.9950989
ENST00000394089ENST00000431235RARAchr1738487648+SEPT9chr1775483506+0.0048739910.99512607
ENST00000394089ENST00000329047RARAchr1738487648+SEPT9chr1775483506+0.0049011320.9950989
ENST00000394089ENST00000590294RARAchr1738487648+SEPT9chr1775483506+0.0061037760.9938962
ENST00000394089ENST00000588690RARAchr1738487648+SEPT9chr1775483506+0.0062510210.993749
ENST00000394089ENST00000423034RARAchr1738487648+SEPT9chr1775483506+0.0048576440.99514234
ENST00000394089ENST00000427674RARAchr1738487648+SEPT9chr1775483506+0.0048576440.99514234
ENST00000425707ENST00000427177RARAchr1738487648+SEPT9chr1775483506+0.0049534760.9950465
ENST00000425707ENST00000591198RARAchr1738487648+SEPT9chr1775483506+0.00643620.99356383
ENST00000425707ENST00000449803RARAchr1738487648+SEPT9chr1775483506+0.0049534760.9950465
ENST00000425707ENST00000431235RARAchr1738487648+SEPT9chr1775483506+0.0049260010.995074
ENST00000425707ENST00000329047RARAchr1738487648+SEPT9chr1775483506+0.0049534760.9950465
ENST00000425707ENST00000590294RARAchr1738487648+SEPT9chr1775483506+0.0061628120.9938372
ENST00000425707ENST00000588690RARAchr1738487648+SEPT9chr1775483506+0.0061984630.99380153
ENST00000425707ENST00000423034RARAchr1738487648+SEPT9chr1775483506+0.0049094710.9950905
ENST00000425707ENST00000427674RARAchr1738487648+SEPT9chr1775483506+0.0049094710.9950905

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Fusion Genomic Features for RARA-SEPT9


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
RARAchr1738487648+SEPT9chr1775483510+2.36E-101
RARAchr1738487648+SEPT9chr1775483510+2.36E-101

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for RARA-SEPT9


check button Go to

FGviewer for the breakpoints of chr17:38487648-chr17:75483506

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneSEPT9chr17:38487648chr17:75483506ENST00000329047211295_567286.3333333333333569.0DomainSeptin-type G
TgeneSEPT9chr17:38487648chr17:75483506ENST00000423034211295_567297.3333333333333580.0DomainSeptin-type G
TgeneSEPT9chr17:38487648chr17:75483506ENST00000427180110295_567192.33333333333334475.0DomainSeptin-type G
TgeneSEPT9chr17:38487648chr17:75483506ENST00000427674211295_567140.33333333333334423.0DomainSeptin-type G
TgeneSEPT9chr17:38487648chr17:75483506ENST00000431235312295_567140.33333333333334423.0DomainSeptin-type G
TgeneSEPT9chr17:38487648chr17:75483506ENST00000449803312295_567140.33333333333334423.0DomainSeptin-type G
TgeneSEPT9chr17:38487648chr17:75483506ENST00000541152110295_56753.333333333333336336.0DomainSeptin-type G
TgeneSEPT9chr17:38487648chr17:75483506ENST00000585930110295_56780.33333333333333363.0DomainSeptin-type G
TgeneSEPT9chr17:38487648chr17:75483506ENST00000588690212295_567140.33333333333334512.6666666666666DomainSeptin-type G
TgeneSEPT9chr17:38487648chr17:75483506ENST00000590294212295_567286.3333333333333354.3333333333333DomainSeptin-type G
TgeneSEPT9chr17:38487648chr17:75483506ENST00000591088110295_56753.333333333333336336.0DomainSeptin-type G
TgeneSEPT9chr17:38487648chr17:75483506ENST00000591198211295_567285.3333333333333568.0DomainSeptin-type G
TgeneSEPT9chr17:38487648chr17:75483506ENST00000592951110295_56753.333333333333336336.0DomainSeptin-type G
TgeneSEPT9chr17:38487648chr17:75483506ENST00000329047211445_453286.3333333333333569.0Nucleotide bindingGTP
TgeneSEPT9chr17:38487648chr17:75483506ENST00000423034211445_453297.3333333333333580.0Nucleotide bindingGTP
TgeneSEPT9chr17:38487648chr17:75483506ENST00000427177312445_453304.3333333333333587.0Nucleotide bindingGTP
TgeneSEPT9chr17:38487648chr17:75483506ENST00000427180110445_453192.33333333333334475.0Nucleotide bindingGTP
TgeneSEPT9chr17:38487648chr17:75483506ENST00000427674211445_453140.33333333333334423.0Nucleotide bindingGTP
TgeneSEPT9chr17:38487648chr17:75483506ENST00000431235312445_453140.33333333333334423.0Nucleotide bindingGTP
TgeneSEPT9chr17:38487648chr17:75483506ENST00000449803312445_453140.33333333333334423.0Nucleotide bindingGTP
TgeneSEPT9chr17:38487648chr17:75483506ENST00000541152110445_45353.333333333333336336.0Nucleotide bindingGTP
TgeneSEPT9chr17:38487648chr17:75483506ENST00000585930110445_45380.33333333333333363.0Nucleotide bindingGTP
TgeneSEPT9chr17:38487648chr17:75483506ENST00000588690212445_453140.33333333333334512.6666666666666Nucleotide bindingGTP
TgeneSEPT9chr17:38487648chr17:75483506ENST00000590294212445_453286.3333333333333354.3333333333333Nucleotide bindingGTP
TgeneSEPT9chr17:38487648chr17:75483506ENST00000591088110445_45353.333333333333336336.0Nucleotide bindingGTP
TgeneSEPT9chr17:38487648chr17:75483506ENST00000591198211445_453285.3333333333333568.0Nucleotide bindingGTP
TgeneSEPT9chr17:38487648chr17:75483506ENST00000592951110445_45353.333333333333336336.0Nucleotide bindingGTP
TgeneSEPT9chr17:38487648chr17:75483506ENST00000329047211305_312286.3333333333333569.0RegionG1 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000329047211362_365286.3333333333333569.0RegionG3 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000329047211444_447286.3333333333333569.0RegionG4 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000423034211305_312297.3333333333333580.0RegionG1 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000423034211362_365297.3333333333333580.0RegionG3 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000423034211444_447297.3333333333333580.0RegionG4 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000427177312305_312304.3333333333333587.0RegionG1 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000427177312362_365304.3333333333333587.0RegionG3 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000427177312444_447304.3333333333333587.0RegionG4 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000427180110305_312192.33333333333334475.0RegionG1 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000427180110362_365192.33333333333334475.0RegionG3 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000427180110444_447192.33333333333334475.0RegionG4 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000427674211305_312140.33333333333334423.0RegionG1 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000427674211362_365140.33333333333334423.0RegionG3 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000427674211444_447140.33333333333334423.0RegionG4 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000431235312305_312140.33333333333334423.0RegionG1 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000431235312362_365140.33333333333334423.0RegionG3 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000431235312444_447140.33333333333334423.0RegionG4 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000449803312305_312140.33333333333334423.0RegionG1 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000449803312362_365140.33333333333334423.0RegionG3 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000449803312444_447140.33333333333334423.0RegionG4 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000541152110305_31253.333333333333336336.0RegionG1 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000541152110362_36553.333333333333336336.0RegionG3 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000541152110444_44753.333333333333336336.0RegionG4 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000585930110305_31280.33333333333333363.0RegionG1 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000585930110362_36580.33333333333333363.0RegionG3 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000585930110444_44780.33333333333333363.0RegionG4 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000588690212305_312140.33333333333334512.6666666666666RegionG1 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000588690212362_365140.33333333333334512.6666666666666RegionG3 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000588690212444_447140.33333333333334512.6666666666666RegionG4 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000590294212305_312286.3333333333333354.3333333333333RegionG1 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000590294212362_365286.3333333333333354.3333333333333RegionG3 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000590294212444_447286.3333333333333354.3333333333333RegionG4 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000591088110305_31253.333333333333336336.0RegionG1 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000591088110362_36553.333333333333336336.0RegionG3 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000591088110444_44753.333333333333336336.0RegionG4 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000591198211305_312285.3333333333333568.0RegionG1 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000591198211362_365285.3333333333333568.0RegionG3 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000591198211444_447285.3333333333333568.0RegionG4 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000592951110305_31253.333333333333336336.0RegionG1 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000592951110362_36553.333333333333336336.0RegionG3 motif
TgeneSEPT9chr17:38487648chr17:75483506ENST00000592951110444_44753.333333333333336336.0RegionG4 motif

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneRARAchr17:38487648chr17:75483506ENST00000254066+2988_15359.333333333333336463.0DNA bindingNuclear receptor
HgeneRARAchr17:38487648chr17:75483506ENST00000394081+1888_1530458.0DNA bindingNuclear receptor
HgeneRARAchr17:38487648chr17:75483506ENST00000394089+2988_15359.333333333333336463.0DNA bindingNuclear receptor
HgeneRARAchr17:38487648chr17:75483506ENST00000425707+2788_15359.333333333333336366.0DNA bindingNuclear receptor
HgeneRARAchr17:38487648chr17:75483506ENST00000254066+29183_41759.333333333333336463.0DomainNR LBD
HgeneRARAchr17:38487648chr17:75483506ENST00000394081+18183_4170458.0DomainNR LBD
HgeneRARAchr17:38487648chr17:75483506ENST00000394089+29183_41759.333333333333336463.0DomainNR LBD
HgeneRARAchr17:38487648chr17:75483506ENST00000425707+27183_41759.333333333333336366.0DomainNR LBD
HgeneRARAchr17:38487648chr17:75483506ENST00000254066+29408_41659.333333333333336463.0Motif9aaTAD
HgeneRARAchr17:38487648chr17:75483506ENST00000394081+18408_4160458.0Motif9aaTAD
HgeneRARAchr17:38487648chr17:75483506ENST00000394089+29408_41659.333333333333336463.0Motif9aaTAD
HgeneRARAchr17:38487648chr17:75483506ENST00000425707+27408_41659.333333333333336366.0Motif9aaTAD
HgeneRARAchr17:38487648chr17:75483506ENST00000254066+29154_18259.333333333333336463.0RegionNote=Hinge
HgeneRARAchr17:38487648chr17:75483506ENST00000254066+291_8759.333333333333336463.0RegionNote=Modulating
HgeneRARAchr17:38487648chr17:75483506ENST00000254066+29404_41959.333333333333336463.0RegionNote=Required for binding corepressor NCOR1
HgeneRARAchr17:38487648chr17:75483506ENST00000394081+18154_1820458.0RegionNote=Hinge
HgeneRARAchr17:38487648chr17:75483506ENST00000394081+181_870458.0RegionNote=Modulating
HgeneRARAchr17:38487648chr17:75483506ENST00000394081+18404_4190458.0RegionNote=Required for binding corepressor NCOR1
HgeneRARAchr17:38487648chr17:75483506ENST00000394089+29154_18259.333333333333336463.0RegionNote=Hinge
HgeneRARAchr17:38487648chr17:75483506ENST00000394089+291_8759.333333333333336463.0RegionNote=Modulating
HgeneRARAchr17:38487648chr17:75483506ENST00000394089+29404_41959.333333333333336463.0RegionNote=Required for binding corepressor NCOR1
HgeneRARAchr17:38487648chr17:75483506ENST00000425707+27154_18259.333333333333336366.0RegionNote=Hinge
HgeneRARAchr17:38487648chr17:75483506ENST00000425707+271_8759.333333333333336366.0RegionNote=Modulating
HgeneRARAchr17:38487648chr17:75483506ENST00000425707+27404_41959.333333333333336366.0RegionNote=Required for binding corepressor NCOR1
HgeneRARAchr17:38487648chr17:75483506ENST00000254066+29124_14859.333333333333336463.0Zinc fingerNR C4-type
HgeneRARAchr17:38487648chr17:75483506ENST00000254066+2988_10859.333333333333336463.0Zinc fingerNR C4-type
HgeneRARAchr17:38487648chr17:75483506ENST00000394081+18124_1480458.0Zinc fingerNR C4-type
HgeneRARAchr17:38487648chr17:75483506ENST00000394081+1888_1080458.0Zinc fingerNR C4-type
HgeneRARAchr17:38487648chr17:75483506ENST00000394089+29124_14859.333333333333336463.0Zinc fingerNR C4-type
HgeneRARAchr17:38487648chr17:75483506ENST00000394089+2988_10859.333333333333336463.0Zinc fingerNR C4-type
HgeneRARAchr17:38487648chr17:75483506ENST00000425707+27124_14859.333333333333336366.0Zinc fingerNR C4-type
HgeneRARAchr17:38487648chr17:75483506ENST00000425707+2788_10859.333333333333336366.0Zinc fingerNR C4-type
TgeneSEPT9chr17:38487648chr17:75483506ENST00000427177312295_567304.3333333333333587.0DomainSeptin-type G


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Fusion Gene Sequence for RARA-SEPT9


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000254066_ENST00000427177_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3415nt_BP=633nt
CAGAAGCAGGGGGGAATCCTGAATCGAGCTGAGAGGGCTTCCCCGGTTCTCCTGGGAACCCCATCGGCCCCCTGCCAGCACACACCTGAG
CAGCATCACAGGACATGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGA
CCTTCCCAGGAAAAGTGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGG
GTGGGGGCTCCAGGAGACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCT
GGGCCCAGGCCCCATGCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGC
TTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCC
CCCCTATGCTGGGTGGACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAG
CCAGGCAGAGCGGCTTGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGG
AGCGCATCCCCAAGACCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACAC
CAGGGTTCGGGGACCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGG
AGGTCAACATCAACCGCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGC
CCCTGGACATCGAGTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGA
GGGTCCACTTCAAACAGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGG
ACCGGCTGGTGAACGAGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC
TTGGGAGGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGC
ACATGCAGAACATCAAGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCA
ACGGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCC
CCCCCCAGGCCCTCCCACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAA
CAAGGGAAGGGGCCTCCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGG
GGTGAGAGCACCCACTGAATTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCAT
CCGTCTGTGTGGGGTTCTCAGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCC
TCCATCCCCATCGGCCCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCAC
ATGGTGTGGCCATCACTCAGCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTC
CAAGCCCCCTGGCAGCTGCCCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTG
GAATGAGGGAGGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGA
TCTGATTGAGGATAAAAAGGAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGG
AGCTGAGGGAGGGAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAG
CTGCCCGGCGCCTGCCCTGCCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTT
TGGCCCAAGACTGGGCTGTAGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGA
GCTGGGGAGGTGGGAGGCCAGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCT
AGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTC
CCCACGAGGGGACCCATGGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGA
GAAAGAGGGGCCTGATGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAG
GTCAGCGAGAAGGAGTGTATGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAG
GACCCCTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGC
CAGCGCCAGGGCCCAGGCCATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCT
TGAGATGCTTCACTTTCCTTCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTG

>In-frame_ENST00000254066_ENST00000427177_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=440_stop in transcript=1480
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000254066_ENST00000591198_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=1852nt_BP=633nt
CAGAAGCAGGGGGGAATCCTGAATCGAGCTGAGAGGGCTTCCCCGGTTCTCCTGGGAACCCCATCGGCCCCCTGCCAGCACACACCTGAG
CAGCATCACAGGACATGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGA
CCTTCCCAGGAAAAGTGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGG
GTGGGGGCTCCAGGAGACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCT
GGGCCCAGGCCCCATGCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGC
TTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCC
CCCCTATGCTGGGTGGACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAG
CCAGGCAGAGCGGCTTGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGG
AGCGCATCCCCAAGACCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACAC
CAGGGTTCGGGGACCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGG
AGGTCAACATCAACCGCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGC
CCCTGGACATCGAGTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGA
GGGTCCACTTCAAACAGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGG
ACCGGCTGGTGAACGAGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC
TTGGGAGGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGC
ACATGCAGAACATCAAGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCA
ACGGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCC
CCCCCCAGGCCCTCCCACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAA
CAAGGGAAGGGGCCTCCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGG
GGTGAGAGCACCCACTGAATTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCAT

>In-frame_ENST00000254066_ENST00000591198_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=440_stop in transcript=1480
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000254066_ENST00000449803_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3415nt_BP=633nt
CAGAAGCAGGGGGGAATCCTGAATCGAGCTGAGAGGGCTTCCCCGGTTCTCCTGGGAACCCCATCGGCCCCCTGCCAGCACACACCTGAG
CAGCATCACAGGACATGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGA
CCTTCCCAGGAAAAGTGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGG
GTGGGGGCTCCAGGAGACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCT
GGGCCCAGGCCCCATGCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGC
TTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCC
CCCCTATGCTGGGTGGACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAG
CCAGGCAGAGCGGCTTGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGG
AGCGCATCCCCAAGACCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACAC
CAGGGTTCGGGGACCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGG
AGGTCAACATCAACCGCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGC
CCCTGGACATCGAGTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGA
GGGTCCACTTCAAACAGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGG
ACCGGCTGGTGAACGAGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC
TTGGGAGGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGC
ACATGCAGAACATCAAGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCA
ACGGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCC
CCCCCCAGGCCCTCCCACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAA
CAAGGGAAGGGGCCTCCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGG
GGTGAGAGCACCCACTGAATTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCAT
CCGTCTGTGTGGGGTTCTCAGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCC
TCCATCCCCATCGGCCCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCAC
ATGGTGTGGCCATCACTCAGCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTC
CAAGCCCCCTGGCAGCTGCCCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTG
GAATGAGGGAGGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGA
TCTGATTGAGGATAAAAAGGAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGG
AGCTGAGGGAGGGAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAG
CTGCCCGGCGCCTGCCCTGCCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTT
TGGCCCAAGACTGGGCTGTAGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGA
GCTGGGGAGGTGGGAGGCCAGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCT
AGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTC
CCCACGAGGGGACCCATGGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGA
GAAAGAGGGGCCTGATGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAG
GTCAGCGAGAAGGAGTGTATGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAG
GACCCCTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGC
CAGCGCCAGGGCCCAGGCCATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCT
TGAGATGCTTCACTTTCCTTCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTG

>In-frame_ENST00000254066_ENST00000449803_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=440_stop in transcript=1480
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000254066_ENST00000431235_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3419nt_BP=633nt
CAGAAGCAGGGGGGAATCCTGAATCGAGCTGAGAGGGCTTCCCCGGTTCTCCTGGGAACCCCATCGGCCCCCTGCCAGCACACACCTGAG
CAGCATCACAGGACATGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGA
CCTTCCCAGGAAAAGTGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGG
GTGGGGGCTCCAGGAGACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCT
GGGCCCAGGCCCCATGCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGC
TTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCC
CCCCTATGCTGGGTGGACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAG
CCAGGCAGAGCGGCTTGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGG
AGCGCATCCCCAAGACCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACAC
CAGGGTTCGGGGACCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGG
AGGTCAACATCAACCGCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGC
CCCTGGACATCGAGTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGA
GGGTCCACTTCAAACAGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGG
ACCGGCTGGTGAACGAGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC
TTGGGAGGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGC
ACATGCAGAACATCAAGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCA
ACGGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCC
CCCCCCAGGCCCTCCCACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAA
CAAGGGAAGGGGCCTCCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGG
GGTGAGAGCACCCACTGAATTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCAT
CCGTCTGTGTGGGGTTCTCAGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCC
TCCATCCCCATCGGCCCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCAC
ATGGTGTGGCCATCACTCAGCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTC
CAAGCCCCCTGGCAGCTGCCCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTG
GAATGAGGGAGGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGA
TCTGATTGAGGATAAAAAGGAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGG
AGCTGAGGGAGGGAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAG
CTGCCCGGCGCCTGCCCTGCCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTT
TGGCCCAAGACTGGGCTGTAGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGA
GCTGGGGAGGTGGGAGGCCAGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCT
AGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTC
CCCACGAGGGGACCCATGGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGA
GAAAGAGGGGCCTGATGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAG
GTCAGCGAGAAGGAGTGTATGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAG
GACCCCTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGC
CAGCGCCAGGGCCCAGGCCATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCT
TGAGATGCTTCACTTTCCTTCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTG

>In-frame_ENST00000254066_ENST00000431235_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=440_stop in transcript=1480
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000254066_ENST00000329047_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3415nt_BP=633nt
CAGAAGCAGGGGGGAATCCTGAATCGAGCTGAGAGGGCTTCCCCGGTTCTCCTGGGAACCCCATCGGCCCCCTGCCAGCACACACCTGAG
CAGCATCACAGGACATGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGA
CCTTCCCAGGAAAAGTGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGG
GTGGGGGCTCCAGGAGACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCT
GGGCCCAGGCCCCATGCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGC
TTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCC
CCCCTATGCTGGGTGGACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAG
CCAGGCAGAGCGGCTTGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGG
AGCGCATCCCCAAGACCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACAC
CAGGGTTCGGGGACCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGG
AGGTCAACATCAACCGCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGC
CCCTGGACATCGAGTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGA
GGGTCCACTTCAAACAGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGG
ACCGGCTGGTGAACGAGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC
TTGGGAGGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGC
ACATGCAGAACATCAAGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCA
ACGGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCC
CCCCCCAGGCCCTCCCACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAA
CAAGGGAAGGGGCCTCCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGG
GGTGAGAGCACCCACTGAATTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCAT
CCGTCTGTGTGGGGTTCTCAGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCC
TCCATCCCCATCGGCCCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCAC
ATGGTGTGGCCATCACTCAGCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTC
CAAGCCCCCTGGCAGCTGCCCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTG
GAATGAGGGAGGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGA
TCTGATTGAGGATAAAAAGGAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGG
AGCTGAGGGAGGGAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAG
CTGCCCGGCGCCTGCCCTGCCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTT
TGGCCCAAGACTGGGCTGTAGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGA
GCTGGGGAGGTGGGAGGCCAGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCT
AGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTC
CCCACGAGGGGACCCATGGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGA
GAAAGAGGGGCCTGATGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAG
GTCAGCGAGAAGGAGTGTATGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAG
GACCCCTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGC
CAGCGCCAGGGCCCAGGCCATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCT
TGAGATGCTTCACTTTCCTTCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTG

>In-frame_ENST00000254066_ENST00000329047_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=440_stop in transcript=1480
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000254066_ENST00000590294_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=1778nt_BP=633nt
CAGAAGCAGGGGGGAATCCTGAATCGAGCTGAGAGGGCTTCCCCGGTTCTCCTGGGAACCCCATCGGCCCCCTGCCAGCACACACCTGAG
CAGCATCACAGGACATGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGA
CCTTCCCAGGAAAAGTGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGG
GTGGGGGCTCCAGGAGACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCT
GGGCCCAGGCCCCATGCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGC
TTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCC
CCCCTATGCTGGGTGGACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAG
CCAGGCAGAGCGGCTTGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGG
AGCGCATCCCCAAGACCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACAC
CAGGGTTCGGGGACCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGG
AGGTCAACATCAACCGCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGC
CCCTGGACATCGAGTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGA
GGGTCCACTTCAAACAGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGG
ACCGGCTGGTGAACGAGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC
TTGGGAGGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGC
ACATGCAGAACATCAAGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCA
ACGGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCC
CCCCCCAGGCCCTCCCACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCCATCCCAGCCTTGAGATGCTTCACTTTCCTTC
TCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTTGTCTTT

>In-frame_ENST00000254066_ENST00000590294_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=440_stop in transcript=1480
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000254066_ENST00000588690_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=2654nt_BP=633nt
CAGAAGCAGGGGGGAATCCTGAATCGAGCTGAGAGGGCTTCCCCGGTTCTCCTGGGAACCCCATCGGCCCCCTGCCAGCACACACCTGAG
CAGCATCACAGGACATGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGA
CCTTCCCAGGAAAAGTGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGG
GTGGGGGCTCCAGGAGACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCT
GGGCCCAGGCCCCATGCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGC
TTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCC
CCCCTATGCTGGGTGGACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAG
CCAGGCAGAGCGGCTTGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGG
AGCGCATCCCCAAGACCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACAC
CAGGGTTCGGGGACCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGG
AGGTCAACATCAACCGCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGC
CCCTGGACATCGAGTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGA
GGGTCCACTTCAAACAGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGG
ACCGGCTGGTGAACGAGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC
TTGGGAGGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGC
ACATGCAGAACATCAAGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCA
ACGGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCC
CCCCCCAGGCCCTCCCACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAA
CAAGGGAAGGGGCCTCCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGG
GGTGAGAGCACCCACTGAATTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCAT
CCGTCTGTGTGGGGTTCTCAGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCC
TCCATCCCCATCGGCCCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCAC
ATGGTGTGGCCATCACTCAGCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTC
CAAGCCCCCTGGCAGCTGCCCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTG
GAATGAGGGAGGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGA
TCTGATTGAGGATAAAAAGGAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAACAGTTTACTTTGCCA
ACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGCCAGCGCCAGGGCCCAGGCCATGTGGCCTGCCCAGCCTCAATG
TCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTCACTTTCCTTCTCTGTAACCAGACTTTGAAAA
ATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTTGTCTTTTTGTATAAATGACAAAGTGTT

>In-frame_ENST00000254066_ENST00000588690_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=440_stop in transcript=1480
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000254066_ENST00000423034_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3417nt_BP=633nt
CAGAAGCAGGGGGGAATCCTGAATCGAGCTGAGAGGGCTTCCCCGGTTCTCCTGGGAACCCCATCGGCCCCCTGCCAGCACACACCTGAG
CAGCATCACAGGACATGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGA
CCTTCCCAGGAAAAGTGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGG
GTGGGGGCTCCAGGAGACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCT
GGGCCCAGGCCCCATGCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGC
TTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCC
CCCCTATGCTGGGTGGACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAG
CCAGGCAGAGCGGCTTGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGG
AGCGCATCCCCAAGACCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACAC
CAGGGTTCGGGGACCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGG
AGGTCAACATCAACCGCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGC
CCCTGGACATCGAGTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGA
GGGTCCACTTCAAACAGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGG
ACCGGCTGGTGAACGAGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC
TTGGGAGGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGC
ACATGCAGAACATCAAGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCA
ACGGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCC
CCCCCCAGGCCCTCCCACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAA
CAAGGGAAGGGGCCTCCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGG
GGTGAGAGCACCCACTGAATTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCAT
CCGTCTGTGTGGGGTTCTCAGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCC
TCCATCCCCATCGGCCCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCAC
ATGGTGTGGCCATCACTCAGCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTC
CAAGCCCCCTGGCAGCTGCCCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTG
GAATGAGGGAGGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGA
TCTGATTGAGGATAAAAAGGAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGG
AGCTGAGGGAGGGAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAG
CTGCCCGGCGCCTGCCCTGCCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTT
TGGCCCAAGACTGGGCTGTAGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGA
GCTGGGGAGGTGGGAGGCCAGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCT
AGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTC
CCCACGAGGGGACCCATGGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGA
GAAAGAGGGGCCTGATGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAG
GTCAGCGAGAAGGAGTGTATGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAG
GACCCCTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGC
CAGCGCCAGGGCCCAGGCCATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCT
TGAGATGCTTCACTTTCCTTCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTG

>In-frame_ENST00000254066_ENST00000423034_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=440_stop in transcript=1480
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000254066_ENST00000427674_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3417nt_BP=633nt
CAGAAGCAGGGGGGAATCCTGAATCGAGCTGAGAGGGCTTCCCCGGTTCTCCTGGGAACCCCATCGGCCCCCTGCCAGCACACACCTGAG
CAGCATCACAGGACATGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGA
CCTTCCCAGGAAAAGTGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGG
GTGGGGGCTCCAGGAGACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCT
GGGCCCAGGCCCCATGCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGC
TTGGCATGGCCAGCAACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCC
CCCCTATGCTGGGTGGACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAG
CCAGGCAGAGCGGCTTGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGG
AGCGCATCCCCAAGACCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACAC
CAGGGTTCGGGGACCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGG
AGGTCAACATCAACCGCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGC
CCCTGGACATCGAGTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGA
GGGTCCACTTCAAACAGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGG
ACCGGCTGGTGAACGAGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC
TTGGGAGGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGC
ACATGCAGAACATCAAGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCA
ACGGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCC
CCCCCCAGGCCCTCCCACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAA
CAAGGGAAGGGGCCTCCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGG
GGTGAGAGCACCCACTGAATTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCAT
CCGTCTGTGTGGGGTTCTCAGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCC
TCCATCCCCATCGGCCCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCAC
ATGGTGTGGCCATCACTCAGCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTC
CAAGCCCCCTGGCAGCTGCCCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTG
GAATGAGGGAGGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGA
TCTGATTGAGGATAAAAAGGAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGG
AGCTGAGGGAGGGAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAG
CTGCCCGGCGCCTGCCCTGCCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTT
TGGCCCAAGACTGGGCTGTAGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGA
GCTGGGGAGGTGGGAGGCCAGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCT
AGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTC
CCCACGAGGGGACCCATGGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGA
GAAAGAGGGGCCTGATGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAG
GTCAGCGAGAAGGAGTGTATGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAG
GACCCCTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGC
CAGCGCCAGGGCCCAGGCCATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCT
TGAGATGCTTCACTTTCCTTCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTG

>In-frame_ENST00000254066_ENST00000427674_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=440_stop in transcript=1480
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000394089_ENST00000427177_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3490nt_BP=708nt
GTGACTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCC
GAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACA
TGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAG
TGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGA
GACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCAT
GCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCA
ACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTG
GACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCT
TGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGA
CCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACC
ACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACC
GCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGT
TTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAAC
AGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACG
AGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCA
AGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCA
AGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGA
AGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCC
CACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCT
CCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCAC
TGAATTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGGT
TCTCAGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCCCCATCGGC
CCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATCA
CTCAGCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAG
CTGCCCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTGGAATGAGGGAGGCGT
CTTCATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGATCTGATTGAGGATAA
AAAGGAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGGAGCTGAGGGAGGGAG
CCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTGCCCGGCGCCTGC
CCTGCCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTTTGGCCCAAGACTGGG
CTGTAGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGAGCTGGGGAGGTGGGA
GGCCAGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCTAGAAAGGAGAGAACG
GGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTCCCCACGAGGGGACCC
ATGGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGA
TGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAG
TGTATGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGGACCCCTCACCACCC
CCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGCCAGCGCCAGGGCCCA
GGCCATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTCACTT
TCCTTCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTT

>In-frame_ENST00000394089_ENST00000427177_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=515_stop in transcript=1555
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000394089_ENST00000591198_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=1927nt_BP=708nt
GTGACTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCC
GAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACA
TGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAG
TGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGA
GACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCAT
GCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCA
ACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTG
GACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCT
TGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGA
CCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACC
ACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACC
GCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGT
TTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAAC
AGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACG
AGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCA
AGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCA
AGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGA
AGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCC
CACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCT
CCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCAC
TGAATTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGGT

>In-frame_ENST00000394089_ENST00000591198_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=515_stop in transcript=1555
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000394089_ENST00000449803_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3490nt_BP=708nt
GTGACTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCC
GAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACA
TGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAG
TGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGA
GACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCAT
GCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCA
ACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTG
GACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCT
TGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGA
CCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACC
ACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACC
GCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGT
TTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAAC
AGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACG
AGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCA
AGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCA
AGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGA
AGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCC
CACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCT
CCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCAC
TGAATTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGGT
TCTCAGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCCCCATCGGC
CCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATCA
CTCAGCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAG
CTGCCCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTGGAATGAGGGAGGCGT
CTTCATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGATCTGATTGAGGATAA
AAAGGAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGGAGCTGAGGGAGGGAG
CCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTGCCCGGCGCCTGC
CCTGCCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTTTGGCCCAAGACTGGG
CTGTAGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGAGCTGGGGAGGTGGGA
GGCCAGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCTAGAAAGGAGAGAACG
GGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTCCCCACGAGGGGACCC
ATGGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGA
TGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAG
TGTATGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGGACCCCTCACCACCC
CCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGCCAGCGCCAGGGCCCA
GGCCATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTCACTT
TCCTTCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTT

>In-frame_ENST00000394089_ENST00000449803_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=515_stop in transcript=1555
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000394089_ENST00000431235_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3494nt_BP=708nt
GTGACTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCC
GAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACA
TGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAG
TGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGA
GACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCAT
GCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCA
ACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTG
GACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCT
TGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGA
CCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACC
ACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACC
GCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGT
TTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAAC
AGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACG
AGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCA
AGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCA
AGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGA
AGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCC
CACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCT
CCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCAC
TGAATTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGGT
TCTCAGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCCCCATCGGC
CCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATCA
CTCAGCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAG
CTGCCCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTGGAATGAGGGAGGCGT
CTTCATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGATCTGATTGAGGATAA
AAAGGAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGGAGCTGAGGGAGGGAG
CCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTGCCCGGCGCCTGC
CCTGCCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTTTGGCCCAAGACTGGG
CTGTAGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGAGCTGGGGAGGTGGGA
GGCCAGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCTAGAAAGGAGAGAACG
GGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTCCCCACGAGGGGACCC
ATGGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGA
TGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAG
TGTATGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGGACCCCTCACCACCC
CCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGCCAGCGCCAGGGCCCA
GGCCATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTCACTT
TCCTTCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTT

>In-frame_ENST00000394089_ENST00000431235_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=515_stop in transcript=1555
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000394089_ENST00000329047_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3490nt_BP=708nt
GTGACTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCC
GAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACA
TGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAG
TGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGA
GACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCAT
GCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCA
ACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTG
GACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCT
TGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGA
CCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACC
ACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACC
GCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGT
TTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAAC
AGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACG
AGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCA
AGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCA
AGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGA
AGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCC
CACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCT
CCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCAC
TGAATTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGGT
TCTCAGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCCCCATCGGC
CCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATCA
CTCAGCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAG
CTGCCCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTGGAATGAGGGAGGCGT
CTTCATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGATCTGATTGAGGATAA
AAAGGAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGGAGCTGAGGGAGGGAG
CCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTGCCCGGCGCCTGC
CCTGCCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTTTGGCCCAAGACTGGG
CTGTAGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGAGCTGGGGAGGTGGGA
GGCCAGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCTAGAAAGGAGAGAACG
GGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTCCCCACGAGGGGACCC
ATGGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGA
TGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAG
TGTATGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGGACCCCTCACCACCC
CCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGCCAGCGCCAGGGCCCA
GGCCATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTCACTT
TCCTTCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTT

>In-frame_ENST00000394089_ENST00000329047_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=515_stop in transcript=1555
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000394089_ENST00000590294_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=1853nt_BP=708nt
GTGACTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCC
GAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACA
TGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAG
TGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGA
GACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCAT
GCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCA
ACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTG
GACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCT
TGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGA
CCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACC
ACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACC
GCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGT
TTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAAC
AGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACG
AGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCA
AGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCA
AGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGA
AGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCC
CACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCCATCCCAGCCTTGAGATGCTTCACTTTCCTTCTCTGTAACCAGACTT
TGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTTGTCTTTTTGTATAAATGACAA

>In-frame_ENST00000394089_ENST00000590294_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=515_stop in transcript=1555
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000394089_ENST00000588690_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=2729nt_BP=708nt
GTGACTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCC
GAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACA
TGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAG
TGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGA
GACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCAT
GCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCA
ACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTG
GACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCT
TGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGA
CCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACC
ACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACC
GCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGT
TTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAAC
AGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACG
AGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCA
AGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCA
AGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGA
AGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCC
CACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCT
CCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCAC
TGAATTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGGT
TCTCAGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCCCCATCGGC
CCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATCA
CTCAGCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAG
CTGCCCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTGGAATGAGGGAGGCGT
CTTCATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGATCTGATTGAGGATAA
AAAGGAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAACAGTTTACTTTGCCAACTTGCCATGTTTTT
GCCAAAACCAAGATTTTGAAGGAAATGAGTGGCCAGCGCCAGGGCCCAGGCCATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGG
GTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTCACTTTCCTTCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATC
AGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTTGTCTTTTTGTATAAATGACAAAGTGTTGAAAATGTATTTCCT

>In-frame_ENST00000394089_ENST00000588690_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=515_stop in transcript=1555
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000394089_ENST00000423034_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3492nt_BP=708nt
GTGACTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCC
GAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACA
TGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAG
TGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGA
GACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCAT
GCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCA
ACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTG
GACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCT
TGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGA
CCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACC
ACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACC
GCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGT
TTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAAC
AGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACG
AGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCA
AGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCA
AGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGA
AGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCC
CACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCT
CCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCAC
TGAATTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGGT
TCTCAGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCCCCATCGGC
CCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATCA
CTCAGCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAG
CTGCCCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTGGAATGAGGGAGGCGT
CTTCATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGATCTGATTGAGGATAA
AAAGGAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGGAGCTGAGGGAGGGAG
CCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTGCCCGGCGCCTGC
CCTGCCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTTTGGCCCAAGACTGGG
CTGTAGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGAGCTGGGGAGGTGGGA
GGCCAGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCTAGAAAGGAGAGAACG
GGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTCCCCACGAGGGGACCC
ATGGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGA
TGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAG
TGTATGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGGACCCCTCACCACCC
CCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGCCAGCGCCAGGGCCCA
GGCCATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTCACTT
TCCTTCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTT

>In-frame_ENST00000394089_ENST00000423034_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=515_stop in transcript=1555
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000394089_ENST00000427674_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3492nt_BP=708nt
GTGACTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCC
GAGCAGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACA
TGGCCCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAG
TGCCAGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGA
GACTGAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCAT
GCCCCGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCA
ACAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTG
GACTCTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCT
TGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGA
CCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACC
ACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACC
GCAAGAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGT
TTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAAC
AGCGGATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACG
AGAAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCA
AGTGGGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCA
AGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGA
AGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCC
CACCACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCT
CCCTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCAC
TGAATTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGGT
TCTCAGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCCCCATCGGC
CCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATCA
CTCAGCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAG
CTGCCCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTGGAATGAGGGAGGCGT
CTTCATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGATCTGATTGAGGATAA
AAAGGAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGGAGCTGAGGGAGGGAG
CCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTGCCCGGCGCCTGC
CCTGCCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTTTGGCCCAAGACTGGG
CTGTAGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGAGCTGGGGAGGTGGGA
GGCCAGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCTAGAAAGGAGAGAACG
GGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTCCCCACGAGGGGACCC
ATGGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGA
TGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAG
TGTATGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGGACCCCTCACCACCC
CCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGCCAGCGCCAGGGCCCA
GGCCATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTCACTT
TCCTTCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTT

>In-frame_ENST00000394089_ENST00000427674_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=515_stop in transcript=1555
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000425707_ENST00000427177_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3486nt_BP=704nt
CTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCCGAGC
AGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACATGGC
CCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAGTGCC
AGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGAGACT
GAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCATGCCC
CGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCAACAG
CAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTGGACT
CTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCTTGGG
TAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGACCAT
CGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACCACAT
CAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACCGCAA
GAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGTTTAT
GAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAACAGCG
GATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACGAGAA
GTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCAAGTG
GGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCAAGGA
CATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGAAGGA
GCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCCCACC
ACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCCT
CCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCACTGAA
TTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGGTTCTC
AGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCCCCATCGGCCCTG
TCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATCACTCA
GCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCTGC
CCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTGGAATGAGGGAGGCGTCTTC
ATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGATCTGATTGAGGATAAAAAG
GAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGGAGCTGAGGGAGGGAGCCAT
GGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTGCCCGGCGCCTGCCCTG
CCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTTTGGCCCAAGACTGGGCTGT
AGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGAGCTGGGGAGGTGGGAGGCC
AGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCTAGAAAGGAGAGAACGGGCG
TCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTCCCCACGAGGGGACCCATGG
GGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAG
ACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTA
TGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGGACCCCTCACCACCCCCAC
TGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGCCAGCGCCAGGGCCCAGGCC
ATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTCACTTTCCT
TCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTTGTCT

>In-frame_ENST00000425707_ENST00000427177_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=511_stop in transcript=1551
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000425707_ENST00000591198_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=1923nt_BP=704nt
CTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCCGAGC
AGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACATGGC
CCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAGTGCC
AGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGAGACT
GAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCATGCCC
CGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCAACAG
CAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTGGACT
CTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCTTGGG
TAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGACCAT
CGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACCACAT
CAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACCGCAA
GAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGTTTAT
GAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAACAGCG
GATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACGAGAA
GTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCAAGTG
GGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCAAGGA
CATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGAAGGA
GCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCCCACC
ACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCCT
CCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCACTGAA
TTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGGTTCTC

>In-frame_ENST00000425707_ENST00000591198_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=511_stop in transcript=1551
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000425707_ENST00000449803_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3486nt_BP=704nt
CTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCCGAGC
AGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACATGGC
CCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAGTGCC
AGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGAGACT
GAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCATGCCC
CGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCAACAG
CAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTGGACT
CTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCTTGGG
TAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGACCAT
CGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACCACAT
CAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACCGCAA
GAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGTTTAT
GAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAACAGCG
GATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACGAGAA
GTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCAAGTG
GGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCAAGGA
CATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGAAGGA
GCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCCCACC
ACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCCT
CCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCACTGAA
TTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGGTTCTC
AGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCCCCATCGGCCCTG
TCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATCACTCA
GCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCTGC
CCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTGGAATGAGGGAGGCGTCTTC
ATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGATCTGATTGAGGATAAAAAG
GAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGGAGCTGAGGGAGGGAGCCAT
GGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTGCCCGGCGCCTGCCCTG
CCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTTTGGCCCAAGACTGGGCTGT
AGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGAGCTGGGGAGGTGGGAGGCC
AGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCTAGAAAGGAGAGAACGGGCG
TCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTCCCCACGAGGGGACCCATGG
GGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAG
ACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTA
TGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGGACCCCTCACCACCCCCAC
TGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGCCAGCGCCAGGGCCCAGGCC
ATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTCACTTTCCT
TCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTTGTCT

>In-frame_ENST00000425707_ENST00000449803_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=511_stop in transcript=1551
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000425707_ENST00000431235_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3490nt_BP=704nt
CTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCCGAGC
AGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACATGGC
CCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAGTGCC
AGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGAGACT
GAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCATGCCC
CGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCAACAG
CAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTGGACT
CTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCTTGGG
TAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGACCAT
CGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACCACAT
CAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACCGCAA
GAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGTTTAT
GAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAACAGCG
GATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACGAGAA
GTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCAAGTG
GGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCAAGGA
CATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGAAGGA
GCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCCCACC
ACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCCT
CCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCACTGAA
TTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGGTTCTC
AGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCCCCATCGGCCCTG
TCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATCACTCA
GCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCTGC
CCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTGGAATGAGGGAGGCGTCTTC
ATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGATCTGATTGAGGATAAAAAG
GAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGGAGCTGAGGGAGGGAGCCAT
GGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTGCCCGGCGCCTGCCCTG
CCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTTTGGCCCAAGACTGGGCTGT
AGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGAGCTGGGGAGGTGGGAGGCC
AGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCTAGAAAGGAGAGAACGGGCG
TCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTCCCCACGAGGGGACCCATGG
GGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAG
ACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTA
TGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGGACCCCTCACCACCCCCAC
TGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGCCAGCGCCAGGGCCCAGGCC
ATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTCACTTTCCT
TCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTTGTCT

>In-frame_ENST00000425707_ENST00000431235_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=511_stop in transcript=1551
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000425707_ENST00000329047_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3486nt_BP=704nt
CTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCCGAGC
AGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACATGGC
CCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAGTGCC
AGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGAGACT
GAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCATGCCC
CGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCAACAG
CAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTGGACT
CTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCTTGGG
TAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGACCAT
CGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACCACAT
CAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACCGCAA
GAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGTTTAT
GAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAACAGCG
GATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACGAGAA
GTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCAAGTG
GGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCAAGGA
CATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGAAGGA
GCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCCCACC
ACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCCT
CCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCACTGAA
TTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGGTTCTC
AGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCCCCATCGGCCCTG
TCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATCACTCA
GCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCTGC
CCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTGGAATGAGGGAGGCGTCTTC
ATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGATCTGATTGAGGATAAAAAG
GAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGGAGCTGAGGGAGGGAGCCAT
GGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTGCCCGGCGCCTGCCCTG
CCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTTTGGCCCAAGACTGGGCTGT
AGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGAGCTGGGGAGGTGGGAGGCC
AGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCTAGAAAGGAGAGAACGGGCG
TCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTCCCCACGAGGGGACCCATGG
GGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAG
ACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTA
TGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGGACCCCTCACCACCCCCAC
TGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGCCAGCGCCAGGGCCCAGGCC
ATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTCACTTTCCT
TCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTTGTCT

>In-frame_ENST00000425707_ENST00000329047_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=511_stop in transcript=1551
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000425707_ENST00000590294_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=1849nt_BP=704nt
CTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCCGAGC
AGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACATGGC
CCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAGTGCC
AGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGAGACT
GAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCATGCCC
CGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCAACAG
CAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTGGACT
CTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCTTGGG
TAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGACCAT
CGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACCACAT
CAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACCGCAA
GAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGTTTAT
GAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAACAGCG
GATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACGAGAA
GTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCAAGTG
GGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCAAGGA
CATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGAAGGA
GCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCCCACC
ACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCCATCCCAGCCTTGAGATGCTTCACTTTCCTTCTCTGTAACCAGACTTTGAA
AAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTTGTCTTTTTGTATAAATGACAAAGTG

>In-frame_ENST00000425707_ENST00000590294_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=511_stop in transcript=1551
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000425707_ENST00000588690_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=2725nt_BP=704nt
CTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCCGAGC
AGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACATGGC
CCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAGTGCC
AGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGAGACT
GAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCATGCCC
CGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCAACAG
CAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTGGACT
CTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCTTGGG
TAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGACCAT
CGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACCACAT
CAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACCGCAA
GAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGTTTAT
GAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAACAGCG
GATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACGAGAA
GTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCAAGTG
GGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCAAGGA
CATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGAAGGA
GCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCCCACC
ACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCCT
CCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCACTGAA
TTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGGTTCTC
AGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCCCCATCGGCCCTG
TCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATCACTCA
GCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCTGC
CCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTGGAATGAGGGAGGCGTCTTC
ATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGATCTGATTGAGGATAAAAAG
GAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCA
AAACCAAGATTTTGAAGGAAATGAGTGGCCAGCGCCAGGGCCCAGGCCATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGG
GGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTCACTTTCCTTCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGC
TCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTTGTCTTTTTGTATAAATGACAAAGTGTTGAAAATGTATTTCCTGAAA

>In-frame_ENST00000425707_ENST00000588690_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=511_stop in transcript=1551
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000425707_ENST00000423034_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3488nt_BP=704nt
CTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCCGAGC
AGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACATGGC
CCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAGTGCC
AGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGAGACT
GAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCATGCCC
CGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCAACAG
CAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTGGACT
CTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCTTGGG
TAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGACCAT
CGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACCACAT
CAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACCGCAA
GAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGTTTAT
GAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAACAGCG
GATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACGAGAA
GTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCAAGTG
GGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCAAGGA
CATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGAAGGA
GCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCCCACC
ACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCCT
CCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCACTGAA
TTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGGTTCTC
AGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCCCCATCGGCCCTG
TCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATCACTCA
GCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCTGC
CCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTGGAATGAGGGAGGCGTCTTC
ATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGATCTGATTGAGGATAAAAAG
GAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGGAGCTGAGGGAGGGAGCCAT
GGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTGCCCGGCGCCTGCCCTG
CCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTTTGGCCCAAGACTGGGCTGT
AGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGAGCTGGGGAGGTGGGAGGCC
AGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCTAGAAAGGAGAGAACGGGCG
TCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTCCCCACGAGGGGACCCATGG
GGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAG
ACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTA
TGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGGACCCCTCACCACCCCCAC
TGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGCCAGCGCCAGGGCCCAGGCC
ATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTCACTTTCCT
TCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTTGTCT

>In-frame_ENST00000425707_ENST00000423034_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=511_stop in transcript=1551
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------
>In-frame_ENST00000425707_ENST00000427674_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(transcript)=3488nt_BP=704nt
CTCGCTATGGCCGCTGCCATCGCCCCGCGCCCCTGAGCCGCGGCCCCCTGGACGGCTCCTCTCCCGGGACCCCGCACCCTGATGCCGAGC
AGCACCAGGGCGCCGGGTTAGGGCAGACGCTGTGCTCGCTGGCACCCCGAACGGGTTGCTTCCCCCGCTGCGAGCATCACAGGACATGGC
CCCCTCAGCCACCTAGCTGGGGCCCATCTAGGAGTGGCATCTTTTTTGGTGCCCTGAAGGCCAGCTCTGGACCTTCCCAGGAAAAGTGCC
AGCTCACAGAACTGCTTGACCAAAGGACCGGCTCTTGAGACATCCCCCAACCCACCTGGCCCCCAGCTAGGGTGGGGGCTCCAGGAGACT
GAGATTAGCCTGCCCTCTTTGGACAGCAGCTCCAGGACAGGGCGGGTGGGCTGACCACCCAAACCCCATCTGGGCCCAGGCCCCATGCCC
CGAGGAGGGGTGGTCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCCCTTCTGACTGTGGCCGCTTGGCATGGCCAGCAACAG
CAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATGGGTACCCGGTGCCTCCCTACGCCTTCTTCTTCCCCCCTATGCTGGGTGGACT
CTCCCCGCCAGGCGCTCTGACCACTCTCCAGCACCAGCTTCCAGTTAGTGGATATAGCACACCATCCCCAGCCAGGCAGAGCGGCTTGGG
TAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGACCAT
CGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCGGATGAAGCTGACAGTGATTGACACACCAGGGTTCGGGGACCACAT
CAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCAGTACGAGAAATACCTGCAGGAGGAGGTCAACATCAACCGCAA
GAAGCGCATCCCGGACACCCGCGTCCACTGCTGCCTCTACTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCGAGTTTAT
GAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGGTCCACTTCAAACAGCG
GATCACCGCAGACCTGCTGTCCAACGGCATCGACGTGTACCCCCAGAAGGAATTTGATGAGGACTCGGAGGACCGGCTGGTGAACGAGAA
GTTCCGGGAGATGATCCCATTTGCTGTGGTGGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCAAGTG
GGGTACCATCGAAGTTGAAAACACCACACACTGTGAGTTTGCCTACCTGCGGGACCTTCTCATCAGGACGCACATGCAGAACATCAAGGA
CATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGAAGGA
GCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCCCCCCAGGCCCTCCCACC
ACCCCATTTTATTTTATATGATTTTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCCT
CCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCCACTGAA
TTGACATGACCCTCTGTCCCCAGGCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGGTTCTC
AGTGCCGGAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCCCCATCGGCCCTG
TCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATCACTCA
GCCCCTACCCCTGCCCTGCTCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCTGC
CCCTCCTGGAGCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTGCTTGGCCAGATGCGGGGACAGGCTGGAATGAGGGAGGCGTCTTC
ATCTCCCTGCCATCCCCCTCTCACGCCACCCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCGCTGGGATCTGATTGAGGATAAAAAG
GAAGGAGAGATGACCCCTACCCCCTCATCCCCCAGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAGGAGCTGAGGGAGGGAGCCAT
GGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTGCCCGGCGCCTGCCCTG
CCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGGGTTTGGCCCAAGACTGGGCTGT
AGTTACATTAATGCCCAGCCAGCCACCCCTGCCACTCACCCTTCCTGGCCCAGGCCTTGCTGACTCTCTGAGCTGGGGAGGTGGGAGGCC
AGGCGAGCCTGACTCTGTTGATCTACCCGTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACGAACCCCTAGAAAGGAGAGAACGGGCG
TCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTCTGTCCCCACGAGGGGACCCATGG
GGGCTGTCTTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAG
ACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTA
TGAGTGTGAGTGTGTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGGACCCCTCACCACCCCCAC
TGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGCCAAAACCAAGATTTTGAAGGAAATGAGTGGCCAGCGCCAGGGCCCAGGCC
ATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCGGGGTGGGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTCACTTTCCT
TCTCTGTAACCAGACTTTGAAAAATTGTTCGTTTCATCAGGCTCTGTTCCTCAATGGCCTTTTGCTACGTGCCTCCCGAGAAATTTGTCT

>In-frame_ENST00000425707_ENST00000427674_TCGA-BH-A202-01A_RARA_chr17_38487648_+_SEPT9_chr17_75483506_length(amino acids)=346AA_start in transcript=511_stop in transcript=1551
MWPLGMASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPARQSGLGKSTLINTLFKSKISRKSVQP
TSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGH
SLRPLDIEFMKRLSKVVNIVPVIAKADTLTLEERVHFKQRITADLLSNGIDVYPQKEFDEDSEDRLVNEKFREMIPFAVVGSDHEYQVNG

--------------------------------------------------------------

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Fusion Gene PPI Analysis for RARA-SEPT9


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for RARA-SEPT9


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for RARA-SEPT9


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneRARAC0023487Acute Promyelocytic Leukemia24CTD_human;ORPHANET
HgeneRARAC0036341Schizophrenia3PSYGENET
HgeneRARAC0006142Malignant neoplasm of breast1CTD_human
HgeneRARAC0009363Congenital ocular coloboma (disorder)1GENOMICS_ENGLAND
HgeneRARAC0010701Phyllodes Tumor1CTD_human
HgeneRARAC0085183Neoplasms, Second Primary1CTD_human
HgeneRARAC0086696Neoplasms, Therapy-Associated1CTD_human
HgeneRARAC0149940Sciatic Neuropathy1CTD_human
HgeneRARAC0154748Lesion of Sciatic Nerve1CTD_human
HgeneRARAC0206650Fibroadenoma1CTD_human
HgeneRARAC0242013Sciatic Neuritis1CTD_human
HgeneRARAC0525045Mood Disorders1PSYGENET
HgeneRARAC0600066Malignant Cystosarcoma Phyllodes1CTD_human
HgeneRARAC0678222Breast Carcinoma1CTD_human
HgeneRARAC0751924Neuralgia-Neuritis, Sciatic Nerve1CTD_human
HgeneRARAC0751925Sciatic Nerve Palsy1CTD_human
HgeneRARAC0877578Treatment related secondary malignancy1CTD_human
HgeneRARAC1257931Mammary Neoplasms, Human1CTD_human
HgeneRARAC1458155Mammary Neoplasms1CTD_human
HgeneRARAC2239176Liver carcinoma1CTD_human
HgeneRARAC4704874Mammary Carcinoma, Human1CTD_human