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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:RBCK1-CLCN7 (FusionGDB2 ID:72168) |
Fusion Gene Summary for RBCK1-CLCN7 |
Fusion gene summary |
Fusion gene information | Fusion gene name: RBCK1-CLCN7 | Fusion gene ID: 72168 | Hgene | Tgene | Gene symbol | RBCK1 | CLCN7 | Gene ID | 10616 | 1186 |
Gene name | RANBP2-type and C3HC4-type zinc finger containing 1 | chloride voltage-gated channel 7 | |
Synonyms | C20orf18|HOIL-1|HOIL1|PBMEI|PGBM1|RBCK2|RNF54|UBCE7IP3|XAP3|XAP4|ZRANB4 | CLC-7|CLC7|HOD|OPTA2|OPTB4|PPP1R63 | |
Cytomap | 20p13 | 16p13.3 | |
Type of gene | protein-coding | protein-coding | |
Description | ranBP-type and C3HC4-type zinc finger-containing protein 1HBV-associated factor 4RBCC protein interacting with PKC1RING finger protein 54RING-type E3 ubiquitin transferase HOIL-1heme-oxidized IRP2 ubiquitin ligase 1hepatitis B virus X-associated pro | H(+)/Cl(-) exchange transporter 7chloride channel 7 alpha subunitchloride channel protein 7chloride channel, voltage-sensitive 7protein phosphatase 1, regulatory subunit 63 | |
Modification date | 20200327 | 20200315 | |
UniProtAcc | . | P51798 | |
Ensembl transtripts involved in fusion gene | ENST00000356286, ENST00000353660, ENST00000382181, ENST00000475269, ENST00000400245, ENST00000400247, | ENST00000448525, ENST00000382745, ENST00000262318, ENST00000566812, | |
Fusion gene scores | * DoF score | 9 X 5 X 6=270 | 8 X 5 X 6=240 |
# samples | 8 | 8 | |
** MAII score | log2(8/270*10)=-1.75488750216347 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(8/240*10)=-1.58496250072116 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: RBCK1 [Title/Abstract] AND CLCN7 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | RBCK1(400375)-CLCN7(1509188), # samples:4 | ||
Anticipated loss of major functional domain due to fusion event. | RBCK1-CLCN7 seems lost the major protein functional domain in Hgene partner, which is a transcription factor due to the frame-shifted ORF. RBCK1-CLCN7 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. RBCK1-CLCN7 seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | RBCK1 | GO:0000209 | protein polyubiquitination | 12629548|17006537 |
Hgene | RBCK1 | GO:0032088 | negative regulation of NF-kappaB transcription factor activity | 17449468 |
Hgene | RBCK1 | GO:0043123 | positive regulation of I-kappaB kinase/NF-kappaB signaling | 19136968|21455173 |
Hgene | RBCK1 | GO:0050852 | T cell receptor signaling pathway | 20005846 |
Hgene | RBCK1 | GO:0051092 | positive regulation of NF-kappaB transcription factor activity | 19136968 |
Hgene | RBCK1 | GO:0097039 | protein linear polyubiquitination | 21455173|21455180|21455181|23453807 |
Fusion gene breakpoints across RBCK1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across CLCN7 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | COAD | TCGA-5M-AAT4-01A | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
ChimerDB4 | COAD | TCGA-AA-3979 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
ChimerDB4 | COAD | TCGA-5M-AAT4-01A | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
ChimerDB4 | COAD | TCGA-5M-AAT4-01A | RBCK1 | chr20 | 400375 | - | CLCN7 | chr16 | 1509188 | - |
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Fusion Gene ORF analysis for RBCK1-CLCN7 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000356286 | ENST00000448525 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
In-frame | ENST00000356286 | ENST00000382745 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
In-frame | ENST00000356286 | ENST00000262318 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
5CDS-intron | ENST00000356286 | ENST00000566812 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
In-frame | ENST00000353660 | ENST00000448525 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
In-frame | ENST00000353660 | ENST00000382745 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
In-frame | ENST00000353660 | ENST00000262318 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
5CDS-intron | ENST00000353660 | ENST00000566812 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
Frame-shift | ENST00000382181 | ENST00000448525 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
Frame-shift | ENST00000382181 | ENST00000382745 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
Frame-shift | ENST00000382181 | ENST00000262318 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
5CDS-intron | ENST00000382181 | ENST00000566812 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
intron-3CDS | ENST00000475269 | ENST00000448525 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
intron-3CDS | ENST00000475269 | ENST00000382745 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
intron-3CDS | ENST00000475269 | ENST00000262318 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
intron-intron | ENST00000475269 | ENST00000566812 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
intron-3CDS | ENST00000400245 | ENST00000448525 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
intron-3CDS | ENST00000400245 | ENST00000382745 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
intron-3CDS | ENST00000400245 | ENST00000262318 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
intron-intron | ENST00000400245 | ENST00000566812 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
intron-3CDS | ENST00000400247 | ENST00000448525 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
intron-3CDS | ENST00000400247 | ENST00000382745 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
intron-3CDS | ENST00000400247 | ENST00000262318 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
intron-intron | ENST00000400247 | ENST00000566812 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000356286 | RBCK1 | chr20 | 400375 | + | ENST00000448525 | CLCN7 | chr16 | 1509188 | - | 4982 | 1461 | 576 | 3284 | 902 |
ENST00000356286 | RBCK1 | chr20 | 400375 | + | ENST00000382745 | CLCN7 | chr16 | 1509188 | - | 4981 | 1461 | 576 | 3284 | 902 |
ENST00000356286 | RBCK1 | chr20 | 400375 | + | ENST00000262318 | CLCN7 | chr16 | 1509188 | - | 4573 | 1461 | 576 | 3644 | 1022 |
ENST00000353660 | RBCK1 | chr20 | 400375 | + | ENST00000448525 | CLCN7 | chr16 | 1509188 | - | 4719 | 1198 | 568 | 3021 | 817 |
ENST00000353660 | RBCK1 | chr20 | 400375 | + | ENST00000382745 | CLCN7 | chr16 | 1509188 | - | 4718 | 1198 | 568 | 3021 | 817 |
ENST00000353660 | RBCK1 | chr20 | 400375 | + | ENST00000262318 | CLCN7 | chr16 | 1509188 | - | 4310 | 1198 | 568 | 3381 | 937 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000356286 | ENST00000448525 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - | 0.001673371 | 0.9983266 |
ENST00000356286 | ENST00000382745 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - | 0.00167978 | 0.99832016 |
ENST00000356286 | ENST00000262318 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - | 0.002967808 | 0.99703217 |
ENST00000353660 | ENST00000448525 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - | 0.004309394 | 0.99569064 |
ENST00000353660 | ENST00000382745 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - | 0.004316999 | 0.99568295 |
ENST00000353660 | ENST00000262318 | RBCK1 | chr20 | 400375 | + | CLCN7 | chr16 | 1509188 | - | 0.004481082 | 0.9955189 |
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Fusion Genomic Features for RBCK1-CLCN7 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for RBCK1-CLCN7 |
Go to FGviewer for the breakpoints of chr20:400375-chr16:1509188 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | CLCN7 |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Slowly voltage-gated channel mediating the exchange of chloride ions against protons (PubMed:18449189, PubMed:21527911). Functions as antiporter and contributes to the acidification of the lysosome lumen and may be involved in maintaining lysosomal pH (PubMed:18449189, PubMed:21527911, PubMed:31155284). The CLC channel family contains both chloride channels and proton-coupled anion transporters that exchange chloride or another anion for protons (By similarity). The presence of conserved gating glutamate residues is typical for family members that function as antiporters (By similarity). {ECO:0000250|UniProtKB:P35523, ECO:0000269|PubMed:18449189, ECO:0000269|PubMed:21527911, ECO:0000269|PubMed:31155284}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000353660 | + | 5 | 11 | 55_119 | 210.0 | 469.0 | Domain | Ubiquitin-like |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000356286 | + | 6 | 12 | 55_119 | 252.0 | 511.0 | Domain | Ubiquitin-like |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000356286 | + | 6 | 12 | 193_222 | 252.0 | 511.0 | Zinc finger | RanBP2-type |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 631_695 | 198.0 | 806.0 | Domain | CBS 1 | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 741_799 | 198.0 | 806.0 | Domain | CBS 2 | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 631_695 | 174.0 | 782.0 | Domain | CBS 1 | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 741_799 | 174.0 | 782.0 | Domain | CBS 2 | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 206_213 | 198.0 | 806.0 | Intramembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 288_300 | 198.0 | 806.0 | Intramembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 304_312 | 198.0 | 806.0 | Intramembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 545_559 | 198.0 | 806.0 | Intramembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 560_562 | 198.0 | 806.0 | Intramembrane | Note%3DLoop between two helices | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 563_574 | 198.0 | 806.0 | Intramembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 575_578 | 198.0 | 806.0 | Intramembrane | Note%3DLoop between two helices | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 206_213 | 174.0 | 782.0 | Intramembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 288_300 | 174.0 | 782.0 | Intramembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 304_312 | 174.0 | 782.0 | Intramembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 545_559 | 174.0 | 782.0 | Intramembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 560_562 | 174.0 | 782.0 | Intramembrane | Note%3DLoop between two helices | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 563_574 | 174.0 | 782.0 | Intramembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 575_578 | 174.0 | 782.0 | Intramembrane | Note%3DLoop between two helices | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 203_207 | 198.0 | 806.0 | Motif | Selectivity filter part_1 | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 245_249 | 198.0 | 806.0 | Motif | Selectivity filter part_2 | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 512_516 | 198.0 | 806.0 | Motif | Selectivity filter part_3 | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 203_207 | 174.0 | 782.0 | Motif | Selectivity filter part_1 | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 245_249 | 174.0 | 782.0 | Motif | Selectivity filter part_2 | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 512_516 | 174.0 | 782.0 | Motif | Selectivity filter part_3 | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 658_660 | 198.0 | 806.0 | Nucleotide binding | ATP | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 783_786 | 198.0 | 806.0 | Nucleotide binding | ATP | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 658_660 | 174.0 | 782.0 | Nucleotide binding | ATP | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 783_786 | 174.0 | 782.0 | Nucleotide binding | ATP | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 598_805 | 198.0 | 806.0 | Topological domain | Cytoplasmic | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 598_805 | 174.0 | 782.0 | Topological domain | Cytoplasmic | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 223_241 | 198.0 | 806.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 247_264 | 198.0 | 806.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 322_341 | 198.0 | 806.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 375_405 | 198.0 | 806.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 410_432 | 198.0 | 806.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 487_507 | 198.0 | 806.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 512_535 | 198.0 | 806.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 579_597 | 198.0 | 806.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 174_197 | 174.0 | 782.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 223_241 | 174.0 | 782.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 247_264 | 174.0 | 782.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 322_341 | 174.0 | 782.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 375_405 | 174.0 | 782.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 410_432 | 174.0 | 782.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 487_507 | 174.0 | 782.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 512_535 | 174.0 | 782.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 579_597 | 174.0 | 782.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000353660 | + | 5 | 11 | 233_261 | 210.0 | 469.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000356286 | + | 6 | 12 | 233_261 | 252.0 | 511.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000353660 | + | 5 | 11 | 278_506 | 210.0 | 469.0 | Region | TRIAD supradomain |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000356286 | + | 6 | 12 | 278_506 | 252.0 | 511.0 | Region | TRIAD supradomain |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000353660 | + | 5 | 11 | 193_222 | 210.0 | 469.0 | Zinc finger | RanBP2-type |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000353660 | + | 5 | 11 | 282_332 | 210.0 | 469.0 | Zinc finger | RING-type 1 |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000353660 | + | 5 | 11 | 351_411 | 210.0 | 469.0 | Zinc finger | IBR-type |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000353660 | + | 5 | 11 | 447_476 | 210.0 | 469.0 | Zinc finger | RING-type 2%3B atypical |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000356286 | + | 6 | 12 | 282_332 | 252.0 | 511.0 | Zinc finger | RING-type 1 |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000356286 | + | 6 | 12 | 351_411 | 252.0 | 511.0 | Zinc finger | IBR-type |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000356286 | + | 6 | 12 | 447_476 | 252.0 | 511.0 | Zinc finger | RING-type 2%3B atypical |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 1_126 | 198.0 | 806.0 | Topological domain | Cytoplasmic | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 1_126 | 174.0 | 782.0 | Topological domain | Cytoplasmic | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 127_159 | 198.0 | 806.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000382745 | 5 | 25 | 174_197 | 198.0 | 806.0 | Transmembrane | Helical | |
Tgene | CLCN7 | chr20:400375 | chr16:1509188 | ENST00000448525 | 4 | 24 | 127_159 | 174.0 | 782.0 | Transmembrane | Helical |
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Fusion Gene Sequence for RBCK1-CLCN7 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000356286_ENST00000448525_TCGA-5M-AAT4-01A_RBCK1_chr20_400375_+_CLCN7_chr16_1509188_length(transcript)=4982nt_BP=1461nt CGCCTGCGGCCCAGCTCCTTCCCGCGGCTCTGCGATGCGGCCCGCAGGGTGACCCGGGCGGGAGTCCGGGGACCCGCGATCAGCCCCGGA GGACGGGGTGGGGTCGCCCCAAACAGGAGCGCCGGGACCGCTGGGACCCCGCACTCGGCGTCCGCCGCCGCCGGGTAGCCGGGCAGTGGA GGTCCCGGATGAGGCGACAATTTTTCCGGCCCCCCCTCCCAGTCCCGCCCCACTTCCGGGGCCGCCACTTTCACTTTCTCTTCCGCCGAA GCCGCTCCCCTTGCGAAGAACTGGGGCCTCCCGGGAGGAGAGAGGGCTTTGCCTTGAAACCCGGGACGCCAGGGGCGCTCCCGCAAGTGG GGGTCCTCCGGGACTTGGAACGCCCCGGCTGGGTGGTGTCCGGGCGTCCTTTCCCCGCTTCTTCCCACCTCGGCTGGTCCCGTTTCCTCC TGCGCCCAGTGCGGACCTGTCTCGGCGCCCGCTGCCCTCTCACCGCCCCACGCAGGATCCCGGCCTGGTCACCGGGCAGTGTGATGCTTC CCGACTGCCGCGGGGACAGCGAGGCACACACAGGGCTTGGGCCGCGCCGGAGGCCACACGGCCTGGCTGAGTTGCTCCTGGTCTCCCGCC TCTCCCAGGCGACCCGGAGGTAGCATTTCCCAGGAGGCACGGTCCCCCCCAGGGGGATGGGCACAGCCACGCCAGATGGACGAGAAGACC AAGAAAGCAGAGGAAATGGCCCTGAGCCTCACCCGAGCAGTGGCGGGCGGGGATGAACAGGTGGCAATGAAGTGTGCCATCTGGCTGGCA GAGCAACGGGTGCCCCTGAGTGTGCAACTGAAGCCTGAGGTCTCCCCAACGCAGGACATCAGGCTGTGGGTGAGCGTGGAGGATGCTCAG ATGCACACCGTCACCATCTGGCTCACAGTGCGCCCTGATATGACAGTGGCGTCTCTCAAGGACATGGTTTTTCTGGACTATGGCTTCCCA CCAGTCTTGCAGCAGTGGGTGATTGGGCAGCGGCTGGCACGAGACCAGGAGACCCTGCACTCCCATGGGGTGCGGCAGAATGGGGACAGT GCCTACCTCTATCTGCTGTCAGCCCGCAACACCTCCCTCAACCCTCAGGAGCTGCAGCGGGAGCGGCAGCTGCGGATGCTGGAAGATCTG GGCTTCAAGGACCTCACGCTGCAGCCGCGGGGCCCTCTGGAGCCAGGCCCCCCAAAGCCCGGGGTCCCCCAGGAACCCGGACGGGGGCAG CCAGATGCAGTGCCTGAGCCCCCACCGGTGGGCTGGCAGTGCCCCGGGTGCACCTTCATCAACAAGCCCACGCGGCCTGGCTGTGAGATG TGCTGCCGGGCGCGCCCCGAGGCCTACCAGGTCCCCGCCTCATACCAGCCCGACGAGGAGGAGCGAGCGCGCCTGGCGGGCGAGGAGGAG GCGCTGCGTCAGTACCAGCAGCCGGTGGCTGCTGGCAGCGGAATCCCCCAGATCAAGTGCTTCCTCAACGGGGTGAAGATCCCCCACGTG GTGCGGCTCAAGACGTTGGTGATCAAAGTGTCCGGTGTGATCCTGTCCGTGGTCGGGGGCCTGGCCGTGGGAAAGGAAGGGCCGATGATC CACTCAGGTTCAGTGATTGCCGCCGGGATCTCTCAGGGAAGGTCAACGTCACTGAAACGAGATTTCAAGATCTTCGAGTACTTCCGCAGA GACACAGAGAAGCGGGACTTCGTCTCCGCAGGGGCTGCGGCCGGAGTGTCAGCGGCGTTTGGAGCCCCCGTGGGTGGGGTCCTGTTCAGC TTGGAGGAGGGTGCGTCCTTCTGGAACCAGTTCCTGACCTGGAGGATCTTCTTTGCTTCCATGATCTCCACGTTCACCCTGAATTTTGTT CTGAGCATTTACCACGGGAACATGTGGGACCTGTCCAGCCCAGGCCTCATCAACTTCGGAAGGTTTGACTCGGAGAAAATGGCCTACACG ATCCACGAGATCCCGGTCTTCATCGCCATGGGCGTGGTGGGCGGTGTGCTTGGAGCAGTGTTCAATGCCTTGAACTACTGGCTGACCATG TTTCGAATCAGGTACATCCACCGGCCCTGCCTGCAGGTGATTGAGGCCGTGCTGGTGGCCGCCGTCACGGCCACAGTTGCCTTCGTGCTG ATCTACTCGTCGCGGGATTGCCAGCCCCTGCAGGGGGGCTCCATGTCCTACCCGCTGCAGCTCTTTTGTGCAGATGGCGAGTACAACTCC ATGGCTGCGGCCTTCTTCAACACCCCGGAGAAGAGCGTGGTGAGCCTCTTCCACGACCCGCCAGGCTCCTACAACCCCCTGACCCTCGGC CTGTTCACGCTGGTCTACTTCTTCCTGGCCTGCTGGACCTACGGGCTCACGGTGTCTGCCGGGGTCTTCATCCCGTCCCTGCTCATCGGG GCTGCCTGGGGCCGGCTCTTTGGGATCTCCCTGTCCTACCTCACGGGGGCGGCGATCTGGGCGGACCCCGGCAAATACGCCCTGATGGGA GCTGCTGCCCAGCTGGGCGGGATTGTGCGGATGACACTGAGCCTGACCGTCATCATGATGGAGGCCACCAGCAACGTGACCTACGGCTTC CCCATCATGCTGGTGCTCATGACCGCCAAGATCGTGGGCGACGTCTTCATTGAGGGCCTGTACGACATGCACATTCAGCTGCAGAGTGTG CCCTTCCTGCACTGGGAGGCCCCGGTCACCTCACACTCACTCACTGCCAGGGAGGTGATGAGCACACCAGTGACCTGCCTGAGGCGGCGT GAGAAGGTCGGCGTCATTGTGGACGTGCTGAGCGACACGGCGTCCAATCACAACGGCTTCCCCGTGGTGGAGCATGCCGATGACACCCAG CCTGCCCGGCTCCAGGGCCTGATCCTGCGCTCCCAGCTCATCGTTCTCCTAAAGCACAAGGTGTTTGTGGAGCGGTCCAACCTGGGCCTG GTACAGCGGCGCCTGAGGCTGAAGGACTTCCGAGACGCCTACCCGCGCTTCCCACCCATCCAGTCCATCCACGTGTCCCAGGACGAGCGG GAGTGCACCATGGACCTCTCCGAGTTCATGAACCCCTCCCCCTACACGGTGCCCCAGGAGGCGTCGCTCCCACGGGTGTTCAAGCTGTTC CGGGCCCTGGGCCTGCGGCACCTGGTGGTGGTGGACAACCGCAATCAGGTTGTCGGGTTGGTGACCAGGAAGGACCTCGCCAGGTACCGC CTGGGAAAGAGAGGCTTGGAGGAGCTCTCGCTGGCCCAGACGTGAGGCCCAGCCCTGCCCATAATGGGCACTGGCGCTGGCACCCCGGCC CTTCTGCATTTCCTCCCGGAGTCACTGGTTTCTCGGCCCAAACCATGCTCCCCAGCAGTGGCAATGGCGAGCACCCTGCAGCTGGGCGGG CAGGCGGCAGGCGCGGAACTGACCCTCTCGCGGGACTGACCCTGTTGTGGGCAGTGGTCTCCCCCCTTGGCGCCTCCTTGCGCAGGCCCA GCCTCCACTCTCCTCGTCTAGGTTTCTTTACCTCCAGGGATCAGCTGTGTGTGTGTGACCTCCCTACCGGGCTATCGGCCTCTTGGGAGC CAGCGGCAGGGCCGGCACCTGCGTGCCTGTGCCCGTGTGCGTGAGACAGAGCCCTTGCCCCTGCTGCTGCCCCGAGGGCTGCCCTGCCCT GGAAGGGCCCCTCTGCCTCCACACCAGTGGAGTCTTCGAGACTTGGGAGCTGCTTGGCCTCATTTTCAGCCATGAGCAGACGGCCTGTGG TCCCTGGGCCTGAGGCACGGACTCGTAGCACCAGGGTTTGGAGGCTGCGACCGCCCCGGAGAGCAGCTTCACACTGGCGCCACAGAGGAG CCCCACGTGCACTCCCCGGCCTGCATCCGGCTTGGGTACACAGGCCCAGAGGACTGGGGTGACTCACGGGCCCTGTGCTGTGATGTTGAG AGCTGAGAAAAACCTCCAAGGCCCTGAGCCCCATGCCCAGCCCTGCCTTGGTCCCCCAACCCCCAGAGCTTGGAGTCTGGGCCCCACACC CAGCCCTGCCTTGGTCCCTGAGCCTCAGAGCGTGGAATTGCTGCCCTGTGGACACTGGCTGGGAAGGCAGGTCTTCCCCTAGCACATGGG GACCCCGGCCTCGAGGGTGACCTCCCTACCCCGCCCCTGCCAGCCACCAAGCGCAGGTGCAGCGGGGGCCAGACTCCTGCCGGCCTCAGA GGACACCTGGCCCAGCACAGGCAGCTAGAAGGGCCGGTGGGCACCGGGGCCGGGAAGCCCCCACCTCACCACCTGAGGGCCCCTGGGAGG CTCCTCTGGCCTGGCTGGGCTGGGTCTGGGGCCGCCACAGGCCCCTCACGGGGCGGCAGAGGCAACTTCAGTGTCCCTGTTAGAGCAACA CGGGTCCCTCCGTGGGGGGCTGGGTGCGGCCCCCTGCCGTGTATTTCCTCCCCAGGGAGTGGGGCCTCCCCGGGAGCTGACGCCACCACC CTGCTTAGCCCTCACAGGGCCCCAAGGTGTCCGAGTGTGTTGGGTCTGAACGCGAAATAAAGAAATCCTCTCAGCCCGCCTTTGCCAGCG TCGTCCCTCCCACCCCACCCAGACCACGTCCAACAGCCTGGGACTTTCGGGACCCTGGGGTCGGGGCACCGTGTGGAGTGAGAAAGGCGT GAAAGACAGCGGCTGCGGCCACCCAGGGCACCAGCCACATCCTCTTCCTCGTCCCCGCCCCTCAGCCTCCCTCCTCTGGCTCCTGGCTGG TGGGTCTGGGGGCAAGGCAGAGGCGCTCCAGGTGGAGGGGGGCGGGCCGGGGTGCCCACGCTGGGGTGACGCAAGAAGAAAACTCCCGGG CCTCAGAGTCGGCGCCGGAAACCTAGGTCTGGGTTTCCCTCGTGGTGGTTGTGTACTGAGGACCTGGAAGTGATCATATTTTGGATATAT >In-frame_ENST00000356286_ENST00000448525_TCGA-5M-AAT4-01A_RBCK1_chr20_400375_+_CLCN7_chr16_1509188_length(amino acids)=902AA_start in transcript=576_stop in transcript=3284 MGRAGGHTAWLSCSWSPASPRRPGGSISQEARSPPGGWAQPRQMDEKTKKAEEMALSLTRAVAGGDEQVAMKCAIWLAEQRVPLSVQLKP EVSPTQDIRLWVSVEDAQMHTVTIWLTVRPDMTVASLKDMVFLDYGFPPVLQQWVIGQRLARDQETLHSHGVRQNGDSAYLYLLSARNTS LNPQELQRERQLRMLEDLGFKDLTLQPRGPLEPGPPKPGVPQEPGRGQPDAVPEPPPVGWQCPGCTFINKPTRPGCEMCCRARPEAYQVP ASYQPDEEERARLAGEEEALRQYQQPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSVIAAGISQ GRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLNFVLSIYHGNMWDLS SPGLINFGRFDSEKMAYTIHEIPVFIAMGVVGGVLGAVFNALNYWLTMFRIRYIHRPCLQVIEAVLVAAVTATVAFVLIYSSRDCQPLQG GSMSYPLQLFCADGEYNSMAAAFFNTPEKSVVSLFHDPPGSYNPLTLGLFTLVYFFLACWTYGLTVSAGVFIPSLLIGAAWGRLFGISLS YLTGAAIWADPGKYALMGAAAQLGGIVRMTLSLTVIMMEATSNVTYGFPIMLVLMTAKIVGDVFIEGLYDMHIQLQSVPFLHWEAPVTSH SLTAREVMSTPVTCLRRREKVGVIVDVLSDTASNHNGFPVVEHADDTQPARLQGLILRSQLIVLLKHKVFVERSNLGLVQRRLRLKDFRD AYPRFPPIQSIHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNRNQVVGLVTRKDLARYRLGKRGLEELSLA -------------------------------------------------------------- >In-frame_ENST00000356286_ENST00000382745_TCGA-5M-AAT4-01A_RBCK1_chr20_400375_+_CLCN7_chr16_1509188_length(transcript)=4981nt_BP=1461nt CGCCTGCGGCCCAGCTCCTTCCCGCGGCTCTGCGATGCGGCCCGCAGGGTGACCCGGGCGGGAGTCCGGGGACCCGCGATCAGCCCCGGA GGACGGGGTGGGGTCGCCCCAAACAGGAGCGCCGGGACCGCTGGGACCCCGCACTCGGCGTCCGCCGCCGCCGGGTAGCCGGGCAGTGGA GGTCCCGGATGAGGCGACAATTTTTCCGGCCCCCCCTCCCAGTCCCGCCCCACTTCCGGGGCCGCCACTTTCACTTTCTCTTCCGCCGAA GCCGCTCCCCTTGCGAAGAACTGGGGCCTCCCGGGAGGAGAGAGGGCTTTGCCTTGAAACCCGGGACGCCAGGGGCGCTCCCGCAAGTGG GGGTCCTCCGGGACTTGGAACGCCCCGGCTGGGTGGTGTCCGGGCGTCCTTTCCCCGCTTCTTCCCACCTCGGCTGGTCCCGTTTCCTCC TGCGCCCAGTGCGGACCTGTCTCGGCGCCCGCTGCCCTCTCACCGCCCCACGCAGGATCCCGGCCTGGTCACCGGGCAGTGTGATGCTTC CCGACTGCCGCGGGGACAGCGAGGCACACACAGGGCTTGGGCCGCGCCGGAGGCCACACGGCCTGGCTGAGTTGCTCCTGGTCTCCCGCC TCTCCCAGGCGACCCGGAGGTAGCATTTCCCAGGAGGCACGGTCCCCCCCAGGGGGATGGGCACAGCCACGCCAGATGGACGAGAAGACC AAGAAAGCAGAGGAAATGGCCCTGAGCCTCACCCGAGCAGTGGCGGGCGGGGATGAACAGGTGGCAATGAAGTGTGCCATCTGGCTGGCA GAGCAACGGGTGCCCCTGAGTGTGCAACTGAAGCCTGAGGTCTCCCCAACGCAGGACATCAGGCTGTGGGTGAGCGTGGAGGATGCTCAG ATGCACACCGTCACCATCTGGCTCACAGTGCGCCCTGATATGACAGTGGCGTCTCTCAAGGACATGGTTTTTCTGGACTATGGCTTCCCA CCAGTCTTGCAGCAGTGGGTGATTGGGCAGCGGCTGGCACGAGACCAGGAGACCCTGCACTCCCATGGGGTGCGGCAGAATGGGGACAGT GCCTACCTCTATCTGCTGTCAGCCCGCAACACCTCCCTCAACCCTCAGGAGCTGCAGCGGGAGCGGCAGCTGCGGATGCTGGAAGATCTG GGCTTCAAGGACCTCACGCTGCAGCCGCGGGGCCCTCTGGAGCCAGGCCCCCCAAAGCCCGGGGTCCCCCAGGAACCCGGACGGGGGCAG CCAGATGCAGTGCCTGAGCCCCCACCGGTGGGCTGGCAGTGCCCCGGGTGCACCTTCATCAACAAGCCCACGCGGCCTGGCTGTGAGATG TGCTGCCGGGCGCGCCCCGAGGCCTACCAGGTCCCCGCCTCATACCAGCCCGACGAGGAGGAGCGAGCGCGCCTGGCGGGCGAGGAGGAG GCGCTGCGTCAGTACCAGCAGCCGGTGGCTGCTGGCAGCGGAATCCCCCAGATCAAGTGCTTCCTCAACGGGGTGAAGATCCCCCACGTG GTGCGGCTCAAGACGTTGGTGATCAAAGTGTCCGGTGTGATCCTGTCCGTGGTCGGGGGCCTGGCCGTGGGAAAGGAAGGGCCGATGATC CACTCAGGTTCAGTGATTGCCGCCGGGATCTCTCAGGGAAGGTCAACGTCACTGAAACGAGATTTCAAGATCTTCGAGTACTTCCGCAGA GACACAGAGAAGCGGGACTTCGTCTCCGCAGGGGCTGCGGCCGGAGTGTCAGCGGCGTTTGGAGCCCCCGTGGGTGGGGTCCTGTTCAGC TTGGAGGAGGGTGCGTCCTTCTGGAACCAGTTCCTGACCTGGAGGATCTTCTTTGCTTCCATGATCTCCACGTTCACCCTGAATTTTGTT CTGAGCATTTACCACGGGAACATGTGGGACCTGTCCAGCCCAGGCCTCATCAACTTCGGAAGGTTTGACTCGGAGAAAATGGCCTACACG ATCCACGAGATCCCGGTCTTCATCGCCATGGGCGTGGTGGGCGGTGTGCTTGGAGCAGTGTTCAATGCCTTGAACTACTGGCTGACCATG TTTCGAATCAGGTACATCCACCGGCCCTGCCTGCAGGTGATTGAGGCCGTGCTGGTGGCCGCCGTCACGGCCACAGTTGCCTTCGTGCTG ATCTACTCGTCGCGGGATTGCCAGCCCCTGCAGGGGGGCTCCATGTCCTACCCGCTGCAGCTCTTTTGTGCAGATGGCGAGTACAACTCC ATGGCTGCGGCCTTCTTCAACACCCCGGAGAAGAGCGTGGTGAGCCTCTTCCACGACCCGCCAGGCTCCTACAACCCCCTGACCCTCGGC CTGTTCACGCTGGTCTACTTCTTCCTGGCCTGCTGGACCTACGGGCTCACGGTGTCTGCCGGGGTCTTCATCCCGTCCCTGCTCATCGGG GCTGCCTGGGGCCGGCTCTTTGGGATCTCCCTGTCCTACCTCACGGGGGCGGCGATCTGGGCGGACCCCGGCAAATACGCCCTGATGGGA GCTGCTGCCCAGCTGGGCGGGATTGTGCGGATGACACTGAGCCTGACCGTCATCATGATGGAGGCCACCAGCAACGTGACCTACGGCTTC CCCATCATGCTGGTGCTCATGACCGCCAAGATCGTGGGCGACGTCTTCATTGAGGGCCTGTACGACATGCACATTCAGCTGCAGAGTGTG CCCTTCCTGCACTGGGAGGCCCCGGTCACCTCACACTCACTCACTGCCAGGGAGGTGATGAGCACACCAGTGACCTGCCTGAGGCGGCGT GAGAAGGTCGGCGTCATTGTGGACGTGCTGAGCGACACGGCGTCCAATCACAACGGCTTCCCCGTGGTGGAGCATGCCGATGACACCCAG CCTGCCCGGCTCCAGGGCCTGATCCTGCGCTCCCAGCTCATCGTTCTCCTAAAGCACAAGGTGTTTGTGGAGCGGTCCAACCTGGGCCTG GTACAGCGGCGCCTGAGGCTGAAGGACTTCCGAGACGCCTACCCGCGCTTCCCACCCATCCAGTCCATCCACGTGTCCCAGGACGAGCGG GAGTGCACCATGGACCTCTCCGAGTTCATGAACCCCTCCCCCTACACGGTGCCCCAGGAGGCGTCGCTCCCACGGGTGTTCAAGCTGTTC CGGGCCCTGGGCCTGCGGCACCTGGTGGTGGTGGACAACCGCAATCAGGTTGTCGGGTTGGTGACCAGGAAGGACCTCGCCAGGTACCGC CTGGGAAAGAGAGGCTTGGAGGAGCTCTCGCTGGCCCAGACGTGAGGCCCAGCCCTGCCCATAATGGGCACTGGCGCTGGCACCCCGGCC CTTCTGCATTTCCTCCCGGAGTCACTGGTTTCTCGGCCCAAACCATGCTCCCCAGCAGTGGCAATGGCGAGCACCCTGCAGCTGGGCGGG CAGGCGGCAGGCGCGGAACTGACCCTCTCGCGGGACTGACCCTGTTGTGGGCAGTGGTCTCCCCCCTTGGCGCCTCCTTGCGCAGGCCCA GCCTCCACTCTCCTCGTCTAGGTTTCTTTACCTCCAGGGATCAGCTGTGTGTGTGTGACCTCCCTACCGGGCTATCGGCCTCTTGGGAGC CAGCGGCAGGGCCGGCACCTGCGTGCCTGTGCCCGTGTGCGTGAGACAGAGCCCTTGCCCCTGCTGCTGCCCCGAGGGCTGCCCTGCCCT GGAAGGGCCCCTCTGCCTCCACACCAGTGGAGTCTTCGAGACTTGGGAGCTGCTTGGCCTCATTTTCAGCCATGAGCAGACGGCCTGTGG TCCCTGGGCCTGAGGCACGGACTCGTAGCACCAGGGTTTGGAGGCTGCGACCGCCCCGGAGAGCAGCTTCACACTGGCGCCACAGAGGAG CCCCACGTGCACTCCCCGGCCTGCATCCGGCTTGGGTACACAGGCCCAGAGGACTGGGGTGACTCACGGGCCCTGTGCTGTGATGTTGAG AGCTGAGAAAAACCTCCAAGGCCCTGAGCCCCATGCCCAGCCCTGCCTTGGTCCCCCAACCCCCAGAGCTTGGAGTCTGGGCCCCACACC CAGCCCTGCCTTGGTCCCTGAGCCTCAGAGCGTGGAATTGCTGCCCTGTGGACACTGGCTGGGAAGGCAGGTCTTCCCCTAGCACATGGG GACCCCGGCCTCGAGGGTGACCTCCCTACCCCGCCCCTGCCAGCCACCAAGCGCAGGTGCAGCGGGGGCCAGACTCCTGCCGGCCTCAGA GGACACCTGGCCCAGCACAGGCAGCTAGAAGGGCCGGTGGGCACCGGGGCCGGGAAGCCCCCACCTCACCACCTGAGGGCCCCTGGGAGG CTCCTCTGGCCTGGCTGGGCTGGGTCTGGGGCCGCCACAGGCCCCTCACGGGGCGGCAGAGGCAACTTCAGTGTCCCTGTTAGAGCAACA CGGGTCCCTCCGTGGGGGGCTGGGTGCGGCCCCCTGCCGTGTATTTCCTCCCCAGGGAGTGGGGCCTCCCCGGGAGCTGACGCCACCACC CTGCTTAGCCCTCACAGGGCCCCAAGGTGTCCGAGTGTGTTGGGTCTGAACGCGAAATAAAGAAATCCTCTCAGCCCGCCTTTGCCAGCG TCGTCCCTCCCACCCCACCCAGACCACGTCCAACAGCCTGGGACTTTCGGGACCCTGGGGTCGGGGCACCGTGTGGAGTGAGAAAGGCGT GAAAGACAGCGGCTGCGGCCACCCAGGGCACCAGCCACATCCTCTTCCTCGTCCCCGCCCCTCAGCCTCCCTCCTCTGGCTCCTGGCTGG TGGGTCTGGGGGCAAGGCAGAGGCGCTCCAGGTGGAGGGGGGCGGGCCGGGGTGCCCACGCTGGGGTGACGCAAGAAGAAAACTCCCGGG CCTCAGAGTCGGCGCCGGAAACCTAGGTCTGGGTTTCCCTCGTGGTGGTTGTGTACTGAGGACCTGGAAGTGATCATATTTTGGATATAT >In-frame_ENST00000356286_ENST00000382745_TCGA-5M-AAT4-01A_RBCK1_chr20_400375_+_CLCN7_chr16_1509188_length(amino acids)=902AA_start in transcript=576_stop in transcript=3284 MGRAGGHTAWLSCSWSPASPRRPGGSISQEARSPPGGWAQPRQMDEKTKKAEEMALSLTRAVAGGDEQVAMKCAIWLAEQRVPLSVQLKP EVSPTQDIRLWVSVEDAQMHTVTIWLTVRPDMTVASLKDMVFLDYGFPPVLQQWVIGQRLARDQETLHSHGVRQNGDSAYLYLLSARNTS LNPQELQRERQLRMLEDLGFKDLTLQPRGPLEPGPPKPGVPQEPGRGQPDAVPEPPPVGWQCPGCTFINKPTRPGCEMCCRARPEAYQVP ASYQPDEEERARLAGEEEALRQYQQPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSVIAAGISQ GRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLNFVLSIYHGNMWDLS SPGLINFGRFDSEKMAYTIHEIPVFIAMGVVGGVLGAVFNALNYWLTMFRIRYIHRPCLQVIEAVLVAAVTATVAFVLIYSSRDCQPLQG GSMSYPLQLFCADGEYNSMAAAFFNTPEKSVVSLFHDPPGSYNPLTLGLFTLVYFFLACWTYGLTVSAGVFIPSLLIGAAWGRLFGISLS YLTGAAIWADPGKYALMGAAAQLGGIVRMTLSLTVIMMEATSNVTYGFPIMLVLMTAKIVGDVFIEGLYDMHIQLQSVPFLHWEAPVTSH SLTAREVMSTPVTCLRRREKVGVIVDVLSDTASNHNGFPVVEHADDTQPARLQGLILRSQLIVLLKHKVFVERSNLGLVQRRLRLKDFRD AYPRFPPIQSIHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNRNQVVGLVTRKDLARYRLGKRGLEELSLA -------------------------------------------------------------- >In-frame_ENST00000356286_ENST00000262318_TCGA-5M-AAT4-01A_RBCK1_chr20_400375_+_CLCN7_chr16_1509188_length(transcript)=4573nt_BP=1461nt CGCCTGCGGCCCAGCTCCTTCCCGCGGCTCTGCGATGCGGCCCGCAGGGTGACCCGGGCGGGAGTCCGGGGACCCGCGATCAGCCCCGGA GGACGGGGTGGGGTCGCCCCAAACAGGAGCGCCGGGACCGCTGGGACCCCGCACTCGGCGTCCGCCGCCGCCGGGTAGCCGGGCAGTGGA GGTCCCGGATGAGGCGACAATTTTTCCGGCCCCCCCTCCCAGTCCCGCCCCACTTCCGGGGCCGCCACTTTCACTTTCTCTTCCGCCGAA GCCGCTCCCCTTGCGAAGAACTGGGGCCTCCCGGGAGGAGAGAGGGCTTTGCCTTGAAACCCGGGACGCCAGGGGCGCTCCCGCAAGTGG GGGTCCTCCGGGACTTGGAACGCCCCGGCTGGGTGGTGTCCGGGCGTCCTTTCCCCGCTTCTTCCCACCTCGGCTGGTCCCGTTTCCTCC TGCGCCCAGTGCGGACCTGTCTCGGCGCCCGCTGCCCTCTCACCGCCCCACGCAGGATCCCGGCCTGGTCACCGGGCAGTGTGATGCTTC CCGACTGCCGCGGGGACAGCGAGGCACACACAGGGCTTGGGCCGCGCCGGAGGCCACACGGCCTGGCTGAGTTGCTCCTGGTCTCCCGCC TCTCCCAGGCGACCCGGAGGTAGCATTTCCCAGGAGGCACGGTCCCCCCCAGGGGGATGGGCACAGCCACGCCAGATGGACGAGAAGACC AAGAAAGCAGAGGAAATGGCCCTGAGCCTCACCCGAGCAGTGGCGGGCGGGGATGAACAGGTGGCAATGAAGTGTGCCATCTGGCTGGCA GAGCAACGGGTGCCCCTGAGTGTGCAACTGAAGCCTGAGGTCTCCCCAACGCAGGACATCAGGCTGTGGGTGAGCGTGGAGGATGCTCAG ATGCACACCGTCACCATCTGGCTCACAGTGCGCCCTGATATGACAGTGGCGTCTCTCAAGGACATGGTTTTTCTGGACTATGGCTTCCCA CCAGTCTTGCAGCAGTGGGTGATTGGGCAGCGGCTGGCACGAGACCAGGAGACCCTGCACTCCCATGGGGTGCGGCAGAATGGGGACAGT GCCTACCTCTATCTGCTGTCAGCCCGCAACACCTCCCTCAACCCTCAGGAGCTGCAGCGGGAGCGGCAGCTGCGGATGCTGGAAGATCTG GGCTTCAAGGACCTCACGCTGCAGCCGCGGGGCCCTCTGGAGCCAGGCCCCCCAAAGCCCGGGGTCCCCCAGGAACCCGGACGGGGGCAG CCAGATGCAGTGCCTGAGCCCCCACCGGTGGGCTGGCAGTGCCCCGGGTGCACCTTCATCAACAAGCCCACGCGGCCTGGCTGTGAGATG TGCTGCCGGGCGCGCCCCGAGGCCTACCAGGTCCCCGCCTCATACCAGCCCGACGAGGAGGAGCGAGCGCGCCTGGCGGGCGAGGAGGAG GCGCTGCGTCAGTACCAGCAGCCGGTGGCTGCTGGCAGCGGAATCCCCCAGATCAAGTGCTTCCTCAACGGGGTGAAGATCCCCCACGTG GTGCGGCTCAAGACGTTGGTGATCAAAGTGTCCGGTGTGATCCTGTCCGTGGTCGGGGGCCTGGCCGTGGGAAAGGAAGGGCCGATGATC CACTCAGGTTCAGTGATTGCCGCCGGGATCTCTCAGGGAAGGTCAACGTCACTGAAACGAGATTTCAAGATCTTCGAGTACTTCCGCAGA GACACAGAGAAGCGGGACTTCGTCTCCGCAGGGGCTGCGGCCGGAGTGTCAGCGGCGTTTGGAGCCCCCGTGGGTGGGGTCCTGTTCAGC TTGGAGGAGGGTGCGTCCTTCTGGAACCAGTTCCTGACCTGGAGGATCTTCTTTGCTTCCATGATCTCCACGTTCACCCTGAATTTTGTT CTGAGCATTTACCACGGGAACATGTGGGACCTGTCCAGCCCAGGCCTCATCAACTTCGGAAGGTTTGACTCGGAGAAAATGGCCTACACG ATCCACGAGATCCCGGTCTTCATCGCCATGGGCGTGGTGGGCGGTGTGCTTGGAGCAGTGTTCAATGCCTTGAACTACTGGCTGACCATG TTTCGAATCAGGTACATCCACCGGCCCTGCCTGCAGGTGATTGAGGCCGTGCTGGTGGCCGCCGTCACGGCCACAGTTGCCTTCGTGCTG ATCTACTCGTCGCGGGATTGCCAGCCCCTGCAGGGGGGCTCCATGTCCTACCCGCTGCAGCTCTTTTGTGCAGATGGCGAGTACAACTCC ATGGCTGCGGCCTTCTTCAACACCCCGGAGAAGAGCGTGGTGAGCCTCTTCCACGACCCGCCAGGCTCCTACAACCCCCTGACCCTCGGC CTGTTCACGCTGGTCTACTTCTTCCTGGCCTGCTGGACCTACGGGCTCACGGTGTCTGCCGGGGTCTTCATCCCGTCCCTGCTCATCGGG GCTGCCTGGGGCCGGCTCTTTGGGATCTCCCTGTCCTACCTCACGGGGGCGGCGATCTGGGCGGACCCCGGCAAATACGCCCTGATGGGA GCTGCTGCCCAGCTGGGCGGGATTGTGCGGATGACACTGAGCCTGACCGTCATCATGATGGAGGCCACCAGCAACGTGACCTACGGCTTC CCCATCATGCTGGTGCTCATGACCGCCAAGATCGTGGGCGACGTCTTCATTGAGGGCCTGTACGACATGCACATTCAGCTGCAGAGTGTG CCCTTCCTGCACTGGGAGGCCCCGGTCACCTCACACTCACTCACTGCCAGGGAGGTGATGAGCACACCAGTGACCTGCCTGAGGCGGCGT GAGAAGGTCGGCGTCATTGTGGACGTGCTGAGCGACACGGCGTCCAATCACAACGGCTTCCCCGTGGTGGAGCATGCCGATGACACCCAG CCTGCCCGGCTCCAGGGCCTGATCCTGCGCTCCCAGCTCATCGTTCTCCTAAAGCACAAGGTGTTTGTGGAGCGGTCCAACCTGGGCCTG GTACAGCGGCGCCTGAGGCTGAAGGACTTCCGAGACGCCTACCCGCGCTTCCCACCCATCCAGTCCATCCACGTGTCCCAGGACGAGCGG GAGTGCACCATGGACCTCTCCGAGTTCATGAACCCCTCCCCCTACACGGTGCCCCAGGCATGCGTCGCTCCCACGGGTGTTCAAGCTGTT CCGGGCCCTGGGCCTGCGGCACCTGGTGGTGGTGGACAACCGCAATCAGGTTGTCGGGTTGGTGACCAGGAAGGACCTCGCCAGGTACCG CCTGGGAAAGAGAGGCTTGGAGGAGCTCTCGCTGGCCCAGACGTGAGGCCCAGCCCTGCCCATAATGGGCACTGGCGCTGGCACCCCGGC CCTTCTGCATTTCCTCCCGGAGTCACTGGTTTCTCGGCCCAAACCATGCTCCCCAGCAGTGGCAATGGCGAGCACCCTGCAGCTGGGCGG GCAGGCGGCAGGCGCGGAACTGACCCTCTCGCGGGACTGACCCTGTTGTGGGCAGTGGTCTCCCCCCTTGGCGCCTCCTTGCGCAGGCCC AGCCTCCACTCTCCTCGTCTAGGTTTCTTTACCTCCAGGGATCAGCTGTGTGTGTGTGACCTCCCTACCGGGCTATCGGCCTCTTGGGAG CCAGCGGCAGGGCCGGCACCTGCGTGCCTGTGCCCGTGTGCGTGAGACAGAGCCCTTGCCCCTGCTGCTGCCCCGAGGGCTGCCCTGCCC TGGAAGGGCCCCTCTGCCTCCACACCAGTGGAGTCTTCGAGACTTGGGAGCTGCTTGGCCTCATTTTCAGCCATGAGCAGACGGCCTGTG GTCCCTGGGCCTGAGGCACGGACTCGTAGCACCAGGGTTTGGAGGCTGCGACCGCCCCGGAGAGCAGCTTCACACTGGCGCCACAGAGGA GCCCCACGTGCACTCCCCGGCCTGCATCCGGCTTGGGTACACAGGCCCAGAGGACTGGGGTGACTCACGGGCCCTGTGCTGTGATGTTGA GAGCTGAGAAAAACCTCCAAGGCCCTGAGCCCCATGCCCAGCCCTGCCTTGGTCCCCCAACCCCCAGAGCTTGGAGTCTGGGCCCCACAC CCAGCCCTGCCTTGGTCCCTGAGCCTCAGAGCGTGGAATTGCTGCCCTGTGGACACTGGCTGGGAAGGCAGGTCTTCCCCTAGCACATGG GGACCCCGGCCTCGAGGGTGACCTCCCTACCCCGCCCCTGCCAGCCACCAAGCGCAGGTGCAGCGGGGGCCAGACTCCTGCCGGCCTCAG AGGACACCTGGCCCAGCACAGGCAGCTAGAAGGGCCGGTGGGCACCGGGGCCGGGAAGCCCCCACCTCACCACCTGAGGGCCCCTGGGAG GCTCCTCTGGCCTGGCTGGGCTGGGTCTGGGGCCGCCACAGGCCCCTCACGGGGCGGCAGAGGCAACTTCAGTGTCCCTGTTAGAGCAAC ACGGGTCCCTCCGTGGGGGGCTGGGTGCGGCCCCCTGCCGTGTATTTCCTCCCCAGGGAGTGGGGCCTCCCCGGGAGCTGACGCCACCAC >In-frame_ENST00000356286_ENST00000262318_TCGA-5M-AAT4-01A_RBCK1_chr20_400375_+_CLCN7_chr16_1509188_length(amino acids)=1022AA_start in transcript=576_stop in transcript=3644 MGRAGGHTAWLSCSWSPASPRRPGGSISQEARSPPGGWAQPRQMDEKTKKAEEMALSLTRAVAGGDEQVAMKCAIWLAEQRVPLSVQLKP EVSPTQDIRLWVSVEDAQMHTVTIWLTVRPDMTVASLKDMVFLDYGFPPVLQQWVIGQRLARDQETLHSHGVRQNGDSAYLYLLSARNTS LNPQELQRERQLRMLEDLGFKDLTLQPRGPLEPGPPKPGVPQEPGRGQPDAVPEPPPVGWQCPGCTFINKPTRPGCEMCCRARPEAYQVP ASYQPDEEERARLAGEEEALRQYQQPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSVIAAGISQ GRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLNFVLSIYHGNMWDLS SPGLINFGRFDSEKMAYTIHEIPVFIAMGVVGGVLGAVFNALNYWLTMFRIRYIHRPCLQVIEAVLVAAVTATVAFVLIYSSRDCQPLQG GSMSYPLQLFCADGEYNSMAAAFFNTPEKSVVSLFHDPPGSYNPLTLGLFTLVYFFLACWTYGLTVSAGVFIPSLLIGAAWGRLFGISLS YLTGAAIWADPGKYALMGAAAQLGGIVRMTLSLTVIMMEATSNVTYGFPIMLVLMTAKIVGDVFIEGLYDMHIQLQSVPFLHWEAPVTSH SLTAREVMSTPVTCLRRREKVGVIVDVLSDTASNHNGFPVVEHADDTQPARLQGLILRSQLIVLLKHKVFVERSNLGLVQRRLRLKDFRD AYPRFPPIQSIHVSQDERECTMDLSEFMNPSPYTVPQACVAPTGVQAVPGPGPAAPGGGGQPQSGCRVGDQEGPRQVPPGKERLGGALAG PDVRPSPAHNGHWRWHPGPSAFPPGVTGFSAQTMLPSSGNGEHPAAGRAGGRRGTDPLAGLTLLWAVVSPLGASLRRPSLHSPRLGFFTS -------------------------------------------------------------- >In-frame_ENST00000353660_ENST00000448525_TCGA-5M-AAT4-01A_RBCK1_chr20_400375_+_CLCN7_chr16_1509188_length(transcript)=4719nt_BP=1198nt GCGCCGGGACCGCTGGGACCCCGCACTCGGCGTCCGCCGCCGCCGGGTAGCCGGGCAGTGGAGGTCCCGGATGAGGCGACAATTTTTCCG GCCCCCCCTCCCAGTCCCGCCCCACTTCCGGGGCCGCCACTTTCACTTTCTCTTCCGCCGAAGCCGCTCCCCTTGCGAAGAACTGGGGCC TCCCGGGAGGAGAGAGGGCTTTGCCTTGAAACCCGGGACGCCAGGGGCGCTCCCGCAAGTGGGGGTCCTCCGGGACTTGGAACGCCCCGG CTGGGTGGTGTCCGGGCGTCCTTTCCCCGCTTCTTCCCACCTCGGCTGGTCCCGTTTCCTCCTGCGCCCAGTGCGGACCTGTCTCGGCGC CCGCTGCCCTCTCACCGCCCCACGCAGGATCCCGGCCTGGTCACCGGGCAGTGTGATGCTTCCCGACTGCCGCGGGGACAGCGAGGCACA CACAGGGCTTGGGCCGCGCCGGAGGCCACACGGCCTGGCTGAGTTGCTCCTGGTCTCCCGCCTCTCCCAGGCGACCCGGAGGTAGCATTT CCCAGGAGGCACGGTCCCCCCCAGGGGGATGGGCACAGCCACGCCAGATGGACGAGAAGACCAAGAAAGGCTGTGGGTGAGCGTGGAGGA TGCTCAGATGCACACCGTCACCATCTGGCTCACAGTGCGCCCTGATATGACAGTGGCGTCTCTCAAGGACATGGTTTTTCTGGACTATGG CTTCCCACCAGTCTTGCAGCAGTGGGTGATTGGGCAGCGGCTGGCACGAGACCAGGAGACCCTGCACTCCCATGGGGTGCGGCAGAATGG GGACAGTGCCTACCTCTATCTGCTGTCAGCCCGCAACACCTCCCTCAACCCTCAGGAGCTGCAGCGGGAGCGGCAGCTGCGGATGCTGGA AGATCTGGGCTTCAAGGACCTCACGCTGCAGCCGCGGGGCCCTCTGGAGCCAGGCCCCCCAAAGCCCGGGGTCCCCCAGGAACCCGGACG GGGGCAGCCAGATGCAGTGCCTGAGCCCCCACCGGTGGGCTGGCAGTGCCCCGGGTGCACCTTCATCAACAAGCCCACGCGGCCTGGCTG TGAGATGTGCTGCCGGGCGCGCCCCGAGGCCTACCAGGTCCCCGCCTCATACCAGCCCGACGAGGAGGAGCGAGCGCGCCTGGCGGGCGA GGAGGAGGCGCTGCGTCAGTACCAGCAGCCGGTGGCTGCTGGCAGCGGAATCCCCCAGATCAAGTGCTTCCTCAACGGGGTGAAGATCCC CCACGTGGTGCGGCTCAAGACGTTGGTGATCAAAGTGTCCGGTGTGATCCTGTCCGTGGTCGGGGGCCTGGCCGTGGGAAAGGAAGGGCC GATGATCCACTCAGGTTCAGTGATTGCCGCCGGGATCTCTCAGGGAAGGTCAACGTCACTGAAACGAGATTTCAAGATCTTCGAGTACTT CCGCAGAGACACAGAGAAGCGGGACTTCGTCTCCGCAGGGGCTGCGGCCGGAGTGTCAGCGGCGTTTGGAGCCCCCGTGGGTGGGGTCCT GTTCAGCTTGGAGGAGGGTGCGTCCTTCTGGAACCAGTTCCTGACCTGGAGGATCTTCTTTGCTTCCATGATCTCCACGTTCACCCTGAA TTTTGTTCTGAGCATTTACCACGGGAACATGTGGGACCTGTCCAGCCCAGGCCTCATCAACTTCGGAAGGTTTGACTCGGAGAAAATGGC CTACACGATCCACGAGATCCCGGTCTTCATCGCCATGGGCGTGGTGGGCGGTGTGCTTGGAGCAGTGTTCAATGCCTTGAACTACTGGCT GACCATGTTTCGAATCAGGTACATCCACCGGCCCTGCCTGCAGGTGATTGAGGCCGTGCTGGTGGCCGCCGTCACGGCCACAGTTGCCTT CGTGCTGATCTACTCGTCGCGGGATTGCCAGCCCCTGCAGGGGGGCTCCATGTCCTACCCGCTGCAGCTCTTTTGTGCAGATGGCGAGTA CAACTCCATGGCTGCGGCCTTCTTCAACACCCCGGAGAAGAGCGTGGTGAGCCTCTTCCACGACCCGCCAGGCTCCTACAACCCCCTGAC CCTCGGCCTGTTCACGCTGGTCTACTTCTTCCTGGCCTGCTGGACCTACGGGCTCACGGTGTCTGCCGGGGTCTTCATCCCGTCCCTGCT CATCGGGGCTGCCTGGGGCCGGCTCTTTGGGATCTCCCTGTCCTACCTCACGGGGGCGGCGATCTGGGCGGACCCCGGCAAATACGCCCT GATGGGAGCTGCTGCCCAGCTGGGCGGGATTGTGCGGATGACACTGAGCCTGACCGTCATCATGATGGAGGCCACCAGCAACGTGACCTA CGGCTTCCCCATCATGCTGGTGCTCATGACCGCCAAGATCGTGGGCGACGTCTTCATTGAGGGCCTGTACGACATGCACATTCAGCTGCA GAGTGTGCCCTTCCTGCACTGGGAGGCCCCGGTCACCTCACACTCACTCACTGCCAGGGAGGTGATGAGCACACCAGTGACCTGCCTGAG GCGGCGTGAGAAGGTCGGCGTCATTGTGGACGTGCTGAGCGACACGGCGTCCAATCACAACGGCTTCCCCGTGGTGGAGCATGCCGATGA CACCCAGCCTGCCCGGCTCCAGGGCCTGATCCTGCGCTCCCAGCTCATCGTTCTCCTAAAGCACAAGGTGTTTGTGGAGCGGTCCAACCT GGGCCTGGTACAGCGGCGCCTGAGGCTGAAGGACTTCCGAGACGCCTACCCGCGCTTCCCACCCATCCAGTCCATCCACGTGTCCCAGGA CGAGCGGGAGTGCACCATGGACCTCTCCGAGTTCATGAACCCCTCCCCCTACACGGTGCCCCAGGAGGCGTCGCTCCCACGGGTGTTCAA GCTGTTCCGGGCCCTGGGCCTGCGGCACCTGGTGGTGGTGGACAACCGCAATCAGGTTGTCGGGTTGGTGACCAGGAAGGACCTCGCCAG GTACCGCCTGGGAAAGAGAGGCTTGGAGGAGCTCTCGCTGGCCCAGACGTGAGGCCCAGCCCTGCCCATAATGGGCACTGGCGCTGGCAC CCCGGCCCTTCTGCATTTCCTCCCGGAGTCACTGGTTTCTCGGCCCAAACCATGCTCCCCAGCAGTGGCAATGGCGAGCACCCTGCAGCT GGGCGGGCAGGCGGCAGGCGCGGAACTGACCCTCTCGCGGGACTGACCCTGTTGTGGGCAGTGGTCTCCCCCCTTGGCGCCTCCTTGCGC AGGCCCAGCCTCCACTCTCCTCGTCTAGGTTTCTTTACCTCCAGGGATCAGCTGTGTGTGTGTGACCTCCCTACCGGGCTATCGGCCTCT TGGGAGCCAGCGGCAGGGCCGGCACCTGCGTGCCTGTGCCCGTGTGCGTGAGACAGAGCCCTTGCCCCTGCTGCTGCCCCGAGGGCTGCC CTGCCCTGGAAGGGCCCCTCTGCCTCCACACCAGTGGAGTCTTCGAGACTTGGGAGCTGCTTGGCCTCATTTTCAGCCATGAGCAGACGG CCTGTGGTCCCTGGGCCTGAGGCACGGACTCGTAGCACCAGGGTTTGGAGGCTGCGACCGCCCCGGAGAGCAGCTTCACACTGGCGCCAC AGAGGAGCCCCACGTGCACTCCCCGGCCTGCATCCGGCTTGGGTACACAGGCCCAGAGGACTGGGGTGACTCACGGGCCCTGTGCTGTGA TGTTGAGAGCTGAGAAAAACCTCCAAGGCCCTGAGCCCCATGCCCAGCCCTGCCTTGGTCCCCCAACCCCCAGAGCTTGGAGTCTGGGCC CCACACCCAGCCCTGCCTTGGTCCCTGAGCCTCAGAGCGTGGAATTGCTGCCCTGTGGACACTGGCTGGGAAGGCAGGTCTTCCCCTAGC ACATGGGGACCCCGGCCTCGAGGGTGACCTCCCTACCCCGCCCCTGCCAGCCACCAAGCGCAGGTGCAGCGGGGGCCAGACTCCTGCCGG CCTCAGAGGACACCTGGCCCAGCACAGGCAGCTAGAAGGGCCGGTGGGCACCGGGGCCGGGAAGCCCCCACCTCACCACCTGAGGGCCCC TGGGAGGCTCCTCTGGCCTGGCTGGGCTGGGTCTGGGGCCGCCACAGGCCCCTCACGGGGCGGCAGAGGCAACTTCAGTGTCCCTGTTAG AGCAACACGGGTCCCTCCGTGGGGGGCTGGGTGCGGCCCCCTGCCGTGTATTTCCTCCCCAGGGAGTGGGGCCTCCCCGGGAGCTGACGC CACCACCCTGCTTAGCCCTCACAGGGCCCCAAGGTGTCCGAGTGTGTTGGGTCTGAACGCGAAATAAAGAAATCCTCTCAGCCCGCCTTT GCCAGCGTCGTCCCTCCCACCCCACCCAGACCACGTCCAACAGCCTGGGACTTTCGGGACCCTGGGGTCGGGGCACCGTGTGGAGTGAGA AAGGCGTGAAAGACAGCGGCTGCGGCCACCCAGGGCACCAGCCACATCCTCTTCCTCGTCCCCGCCCCTCAGCCTCCCTCCTCTGGCTCC TGGCTGGTGGGTCTGGGGGCAAGGCAGAGGCGCTCCAGGTGGAGGGGGGCGGGCCGGGGTGCCCACGCTGGGGTGACGCAAGAAGAAAAC TCCCGGGCCTCAGAGTCGGCGCCGGAAACCTAGGTCTGGGTTTCCCTCGTGGTGGTTGTGTACTGAGGACCTGGAAGTGATCATATTTTG >In-frame_ENST00000353660_ENST00000448525_TCGA-5M-AAT4-01A_RBCK1_chr20_400375_+_CLCN7_chr16_1509188_length(amino acids)=817AA_start in transcript=568_stop in transcript=3021 MGTATPDGREDQERLWVSVEDAQMHTVTIWLTVRPDMTVASLKDMVFLDYGFPPVLQQWVIGQRLARDQETLHSHGVRQNGDSAYLYLLS ARNTSLNPQELQRERQLRMLEDLGFKDLTLQPRGPLEPGPPKPGVPQEPGRGQPDAVPEPPPVGWQCPGCTFINKPTRPGCEMCCRARPE AYQVPASYQPDEEERARLAGEEEALRQYQQPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSVIA AGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLNFVLSIYHGN MWDLSSPGLINFGRFDSEKMAYTIHEIPVFIAMGVVGGVLGAVFNALNYWLTMFRIRYIHRPCLQVIEAVLVAAVTATVAFVLIYSSRDC QPLQGGSMSYPLQLFCADGEYNSMAAAFFNTPEKSVVSLFHDPPGSYNPLTLGLFTLVYFFLACWTYGLTVSAGVFIPSLLIGAAWGRLF GISLSYLTGAAIWADPGKYALMGAAAQLGGIVRMTLSLTVIMMEATSNVTYGFPIMLVLMTAKIVGDVFIEGLYDMHIQLQSVPFLHWEA PVTSHSLTAREVMSTPVTCLRRREKVGVIVDVLSDTASNHNGFPVVEHADDTQPARLQGLILRSQLIVLLKHKVFVERSNLGLVQRRLRL KDFRDAYPRFPPIQSIHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNRNQVVGLVTRKDLARYRLGKRGLE -------------------------------------------------------------- >In-frame_ENST00000353660_ENST00000382745_TCGA-5M-AAT4-01A_RBCK1_chr20_400375_+_CLCN7_chr16_1509188_length(transcript)=4718nt_BP=1198nt GCGCCGGGACCGCTGGGACCCCGCACTCGGCGTCCGCCGCCGCCGGGTAGCCGGGCAGTGGAGGTCCCGGATGAGGCGACAATTTTTCCG GCCCCCCCTCCCAGTCCCGCCCCACTTCCGGGGCCGCCACTTTCACTTTCTCTTCCGCCGAAGCCGCTCCCCTTGCGAAGAACTGGGGCC TCCCGGGAGGAGAGAGGGCTTTGCCTTGAAACCCGGGACGCCAGGGGCGCTCCCGCAAGTGGGGGTCCTCCGGGACTTGGAACGCCCCGG CTGGGTGGTGTCCGGGCGTCCTTTCCCCGCTTCTTCCCACCTCGGCTGGTCCCGTTTCCTCCTGCGCCCAGTGCGGACCTGTCTCGGCGC CCGCTGCCCTCTCACCGCCCCACGCAGGATCCCGGCCTGGTCACCGGGCAGTGTGATGCTTCCCGACTGCCGCGGGGACAGCGAGGCACA CACAGGGCTTGGGCCGCGCCGGAGGCCACACGGCCTGGCTGAGTTGCTCCTGGTCTCCCGCCTCTCCCAGGCGACCCGGAGGTAGCATTT CCCAGGAGGCACGGTCCCCCCCAGGGGGATGGGCACAGCCACGCCAGATGGACGAGAAGACCAAGAAAGGCTGTGGGTGAGCGTGGAGGA TGCTCAGATGCACACCGTCACCATCTGGCTCACAGTGCGCCCTGATATGACAGTGGCGTCTCTCAAGGACATGGTTTTTCTGGACTATGG CTTCCCACCAGTCTTGCAGCAGTGGGTGATTGGGCAGCGGCTGGCACGAGACCAGGAGACCCTGCACTCCCATGGGGTGCGGCAGAATGG GGACAGTGCCTACCTCTATCTGCTGTCAGCCCGCAACACCTCCCTCAACCCTCAGGAGCTGCAGCGGGAGCGGCAGCTGCGGATGCTGGA AGATCTGGGCTTCAAGGACCTCACGCTGCAGCCGCGGGGCCCTCTGGAGCCAGGCCCCCCAAAGCCCGGGGTCCCCCAGGAACCCGGACG GGGGCAGCCAGATGCAGTGCCTGAGCCCCCACCGGTGGGCTGGCAGTGCCCCGGGTGCACCTTCATCAACAAGCCCACGCGGCCTGGCTG TGAGATGTGCTGCCGGGCGCGCCCCGAGGCCTACCAGGTCCCCGCCTCATACCAGCCCGACGAGGAGGAGCGAGCGCGCCTGGCGGGCGA GGAGGAGGCGCTGCGTCAGTACCAGCAGCCGGTGGCTGCTGGCAGCGGAATCCCCCAGATCAAGTGCTTCCTCAACGGGGTGAAGATCCC CCACGTGGTGCGGCTCAAGACGTTGGTGATCAAAGTGTCCGGTGTGATCCTGTCCGTGGTCGGGGGCCTGGCCGTGGGAAAGGAAGGGCC GATGATCCACTCAGGTTCAGTGATTGCCGCCGGGATCTCTCAGGGAAGGTCAACGTCACTGAAACGAGATTTCAAGATCTTCGAGTACTT CCGCAGAGACACAGAGAAGCGGGACTTCGTCTCCGCAGGGGCTGCGGCCGGAGTGTCAGCGGCGTTTGGAGCCCCCGTGGGTGGGGTCCT GTTCAGCTTGGAGGAGGGTGCGTCCTTCTGGAACCAGTTCCTGACCTGGAGGATCTTCTTTGCTTCCATGATCTCCACGTTCACCCTGAA TTTTGTTCTGAGCATTTACCACGGGAACATGTGGGACCTGTCCAGCCCAGGCCTCATCAACTTCGGAAGGTTTGACTCGGAGAAAATGGC CTACACGATCCACGAGATCCCGGTCTTCATCGCCATGGGCGTGGTGGGCGGTGTGCTTGGAGCAGTGTTCAATGCCTTGAACTACTGGCT GACCATGTTTCGAATCAGGTACATCCACCGGCCCTGCCTGCAGGTGATTGAGGCCGTGCTGGTGGCCGCCGTCACGGCCACAGTTGCCTT CGTGCTGATCTACTCGTCGCGGGATTGCCAGCCCCTGCAGGGGGGCTCCATGTCCTACCCGCTGCAGCTCTTTTGTGCAGATGGCGAGTA CAACTCCATGGCTGCGGCCTTCTTCAACACCCCGGAGAAGAGCGTGGTGAGCCTCTTCCACGACCCGCCAGGCTCCTACAACCCCCTGAC CCTCGGCCTGTTCACGCTGGTCTACTTCTTCCTGGCCTGCTGGACCTACGGGCTCACGGTGTCTGCCGGGGTCTTCATCCCGTCCCTGCT CATCGGGGCTGCCTGGGGCCGGCTCTTTGGGATCTCCCTGTCCTACCTCACGGGGGCGGCGATCTGGGCGGACCCCGGCAAATACGCCCT GATGGGAGCTGCTGCCCAGCTGGGCGGGATTGTGCGGATGACACTGAGCCTGACCGTCATCATGATGGAGGCCACCAGCAACGTGACCTA CGGCTTCCCCATCATGCTGGTGCTCATGACCGCCAAGATCGTGGGCGACGTCTTCATTGAGGGCCTGTACGACATGCACATTCAGCTGCA GAGTGTGCCCTTCCTGCACTGGGAGGCCCCGGTCACCTCACACTCACTCACTGCCAGGGAGGTGATGAGCACACCAGTGACCTGCCTGAG GCGGCGTGAGAAGGTCGGCGTCATTGTGGACGTGCTGAGCGACACGGCGTCCAATCACAACGGCTTCCCCGTGGTGGAGCATGCCGATGA CACCCAGCCTGCCCGGCTCCAGGGCCTGATCCTGCGCTCCCAGCTCATCGTTCTCCTAAAGCACAAGGTGTTTGTGGAGCGGTCCAACCT GGGCCTGGTACAGCGGCGCCTGAGGCTGAAGGACTTCCGAGACGCCTACCCGCGCTTCCCACCCATCCAGTCCATCCACGTGTCCCAGGA CGAGCGGGAGTGCACCATGGACCTCTCCGAGTTCATGAACCCCTCCCCCTACACGGTGCCCCAGGAGGCGTCGCTCCCACGGGTGTTCAA GCTGTTCCGGGCCCTGGGCCTGCGGCACCTGGTGGTGGTGGACAACCGCAATCAGGTTGTCGGGTTGGTGACCAGGAAGGACCTCGCCAG GTACCGCCTGGGAAAGAGAGGCTTGGAGGAGCTCTCGCTGGCCCAGACGTGAGGCCCAGCCCTGCCCATAATGGGCACTGGCGCTGGCAC CCCGGCCCTTCTGCATTTCCTCCCGGAGTCACTGGTTTCTCGGCCCAAACCATGCTCCCCAGCAGTGGCAATGGCGAGCACCCTGCAGCT GGGCGGGCAGGCGGCAGGCGCGGAACTGACCCTCTCGCGGGACTGACCCTGTTGTGGGCAGTGGTCTCCCCCCTTGGCGCCTCCTTGCGC AGGCCCAGCCTCCACTCTCCTCGTCTAGGTTTCTTTACCTCCAGGGATCAGCTGTGTGTGTGTGACCTCCCTACCGGGCTATCGGCCTCT TGGGAGCCAGCGGCAGGGCCGGCACCTGCGTGCCTGTGCCCGTGTGCGTGAGACAGAGCCCTTGCCCCTGCTGCTGCCCCGAGGGCTGCC CTGCCCTGGAAGGGCCCCTCTGCCTCCACACCAGTGGAGTCTTCGAGACTTGGGAGCTGCTTGGCCTCATTTTCAGCCATGAGCAGACGG CCTGTGGTCCCTGGGCCTGAGGCACGGACTCGTAGCACCAGGGTTTGGAGGCTGCGACCGCCCCGGAGAGCAGCTTCACACTGGCGCCAC AGAGGAGCCCCACGTGCACTCCCCGGCCTGCATCCGGCTTGGGTACACAGGCCCAGAGGACTGGGGTGACTCACGGGCCCTGTGCTGTGA TGTTGAGAGCTGAGAAAAACCTCCAAGGCCCTGAGCCCCATGCCCAGCCCTGCCTTGGTCCCCCAACCCCCAGAGCTTGGAGTCTGGGCC CCACACCCAGCCCTGCCTTGGTCCCTGAGCCTCAGAGCGTGGAATTGCTGCCCTGTGGACACTGGCTGGGAAGGCAGGTCTTCCCCTAGC ACATGGGGACCCCGGCCTCGAGGGTGACCTCCCTACCCCGCCCCTGCCAGCCACCAAGCGCAGGTGCAGCGGGGGCCAGACTCCTGCCGG CCTCAGAGGACACCTGGCCCAGCACAGGCAGCTAGAAGGGCCGGTGGGCACCGGGGCCGGGAAGCCCCCACCTCACCACCTGAGGGCCCC TGGGAGGCTCCTCTGGCCTGGCTGGGCTGGGTCTGGGGCCGCCACAGGCCCCTCACGGGGCGGCAGAGGCAACTTCAGTGTCCCTGTTAG AGCAACACGGGTCCCTCCGTGGGGGGCTGGGTGCGGCCCCCTGCCGTGTATTTCCTCCCCAGGGAGTGGGGCCTCCCCGGGAGCTGACGC CACCACCCTGCTTAGCCCTCACAGGGCCCCAAGGTGTCCGAGTGTGTTGGGTCTGAACGCGAAATAAAGAAATCCTCTCAGCCCGCCTTT GCCAGCGTCGTCCCTCCCACCCCACCCAGACCACGTCCAACAGCCTGGGACTTTCGGGACCCTGGGGTCGGGGCACCGTGTGGAGTGAGA AAGGCGTGAAAGACAGCGGCTGCGGCCACCCAGGGCACCAGCCACATCCTCTTCCTCGTCCCCGCCCCTCAGCCTCCCTCCTCTGGCTCC TGGCTGGTGGGTCTGGGGGCAAGGCAGAGGCGCTCCAGGTGGAGGGGGGCGGGCCGGGGTGCCCACGCTGGGGTGACGCAAGAAGAAAAC TCCCGGGCCTCAGAGTCGGCGCCGGAAACCTAGGTCTGGGTTTCCCTCGTGGTGGTTGTGTACTGAGGACCTGGAAGTGATCATATTTTG >In-frame_ENST00000353660_ENST00000382745_TCGA-5M-AAT4-01A_RBCK1_chr20_400375_+_CLCN7_chr16_1509188_length(amino acids)=817AA_start in transcript=568_stop in transcript=3021 MGTATPDGREDQERLWVSVEDAQMHTVTIWLTVRPDMTVASLKDMVFLDYGFPPVLQQWVIGQRLARDQETLHSHGVRQNGDSAYLYLLS ARNTSLNPQELQRERQLRMLEDLGFKDLTLQPRGPLEPGPPKPGVPQEPGRGQPDAVPEPPPVGWQCPGCTFINKPTRPGCEMCCRARPE AYQVPASYQPDEEERARLAGEEEALRQYQQPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSVIA AGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLNFVLSIYHGN MWDLSSPGLINFGRFDSEKMAYTIHEIPVFIAMGVVGGVLGAVFNALNYWLTMFRIRYIHRPCLQVIEAVLVAAVTATVAFVLIYSSRDC QPLQGGSMSYPLQLFCADGEYNSMAAAFFNTPEKSVVSLFHDPPGSYNPLTLGLFTLVYFFLACWTYGLTVSAGVFIPSLLIGAAWGRLF GISLSYLTGAAIWADPGKYALMGAAAQLGGIVRMTLSLTVIMMEATSNVTYGFPIMLVLMTAKIVGDVFIEGLYDMHIQLQSVPFLHWEA PVTSHSLTAREVMSTPVTCLRRREKVGVIVDVLSDTASNHNGFPVVEHADDTQPARLQGLILRSQLIVLLKHKVFVERSNLGLVQRRLRL KDFRDAYPRFPPIQSIHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLVVVDNRNQVVGLVTRKDLARYRLGKRGLE -------------------------------------------------------------- >In-frame_ENST00000353660_ENST00000262318_TCGA-5M-AAT4-01A_RBCK1_chr20_400375_+_CLCN7_chr16_1509188_length(transcript)=4310nt_BP=1198nt GCGCCGGGACCGCTGGGACCCCGCACTCGGCGTCCGCCGCCGCCGGGTAGCCGGGCAGTGGAGGTCCCGGATGAGGCGACAATTTTTCCG GCCCCCCCTCCCAGTCCCGCCCCACTTCCGGGGCCGCCACTTTCACTTTCTCTTCCGCCGAAGCCGCTCCCCTTGCGAAGAACTGGGGCC TCCCGGGAGGAGAGAGGGCTTTGCCTTGAAACCCGGGACGCCAGGGGCGCTCCCGCAAGTGGGGGTCCTCCGGGACTTGGAACGCCCCGG CTGGGTGGTGTCCGGGCGTCCTTTCCCCGCTTCTTCCCACCTCGGCTGGTCCCGTTTCCTCCTGCGCCCAGTGCGGACCTGTCTCGGCGC CCGCTGCCCTCTCACCGCCCCACGCAGGATCCCGGCCTGGTCACCGGGCAGTGTGATGCTTCCCGACTGCCGCGGGGACAGCGAGGCACA CACAGGGCTTGGGCCGCGCCGGAGGCCACACGGCCTGGCTGAGTTGCTCCTGGTCTCCCGCCTCTCCCAGGCGACCCGGAGGTAGCATTT CCCAGGAGGCACGGTCCCCCCCAGGGGGATGGGCACAGCCACGCCAGATGGACGAGAAGACCAAGAAAGGCTGTGGGTGAGCGTGGAGGA TGCTCAGATGCACACCGTCACCATCTGGCTCACAGTGCGCCCTGATATGACAGTGGCGTCTCTCAAGGACATGGTTTTTCTGGACTATGG CTTCCCACCAGTCTTGCAGCAGTGGGTGATTGGGCAGCGGCTGGCACGAGACCAGGAGACCCTGCACTCCCATGGGGTGCGGCAGAATGG GGACAGTGCCTACCTCTATCTGCTGTCAGCCCGCAACACCTCCCTCAACCCTCAGGAGCTGCAGCGGGAGCGGCAGCTGCGGATGCTGGA AGATCTGGGCTTCAAGGACCTCACGCTGCAGCCGCGGGGCCCTCTGGAGCCAGGCCCCCCAAAGCCCGGGGTCCCCCAGGAACCCGGACG GGGGCAGCCAGATGCAGTGCCTGAGCCCCCACCGGTGGGCTGGCAGTGCCCCGGGTGCACCTTCATCAACAAGCCCACGCGGCCTGGCTG TGAGATGTGCTGCCGGGCGCGCCCCGAGGCCTACCAGGTCCCCGCCTCATACCAGCCCGACGAGGAGGAGCGAGCGCGCCTGGCGGGCGA GGAGGAGGCGCTGCGTCAGTACCAGCAGCCGGTGGCTGCTGGCAGCGGAATCCCCCAGATCAAGTGCTTCCTCAACGGGGTGAAGATCCC CCACGTGGTGCGGCTCAAGACGTTGGTGATCAAAGTGTCCGGTGTGATCCTGTCCGTGGTCGGGGGCCTGGCCGTGGGAAAGGAAGGGCC GATGATCCACTCAGGTTCAGTGATTGCCGCCGGGATCTCTCAGGGAAGGTCAACGTCACTGAAACGAGATTTCAAGATCTTCGAGTACTT CCGCAGAGACACAGAGAAGCGGGACTTCGTCTCCGCAGGGGCTGCGGCCGGAGTGTCAGCGGCGTTTGGAGCCCCCGTGGGTGGGGTCCT GTTCAGCTTGGAGGAGGGTGCGTCCTTCTGGAACCAGTTCCTGACCTGGAGGATCTTCTTTGCTTCCATGATCTCCACGTTCACCCTGAA TTTTGTTCTGAGCATTTACCACGGGAACATGTGGGACCTGTCCAGCCCAGGCCTCATCAACTTCGGAAGGTTTGACTCGGAGAAAATGGC CTACACGATCCACGAGATCCCGGTCTTCATCGCCATGGGCGTGGTGGGCGGTGTGCTTGGAGCAGTGTTCAATGCCTTGAACTACTGGCT GACCATGTTTCGAATCAGGTACATCCACCGGCCCTGCCTGCAGGTGATTGAGGCCGTGCTGGTGGCCGCCGTCACGGCCACAGTTGCCTT CGTGCTGATCTACTCGTCGCGGGATTGCCAGCCCCTGCAGGGGGGCTCCATGTCCTACCCGCTGCAGCTCTTTTGTGCAGATGGCGAGTA CAACTCCATGGCTGCGGCCTTCTTCAACACCCCGGAGAAGAGCGTGGTGAGCCTCTTCCACGACCCGCCAGGCTCCTACAACCCCCTGAC CCTCGGCCTGTTCACGCTGGTCTACTTCTTCCTGGCCTGCTGGACCTACGGGCTCACGGTGTCTGCCGGGGTCTTCATCCCGTCCCTGCT CATCGGGGCTGCCTGGGGCCGGCTCTTTGGGATCTCCCTGTCCTACCTCACGGGGGCGGCGATCTGGGCGGACCCCGGCAAATACGCCCT GATGGGAGCTGCTGCCCAGCTGGGCGGGATTGTGCGGATGACACTGAGCCTGACCGTCATCATGATGGAGGCCACCAGCAACGTGACCTA CGGCTTCCCCATCATGCTGGTGCTCATGACCGCCAAGATCGTGGGCGACGTCTTCATTGAGGGCCTGTACGACATGCACATTCAGCTGCA GAGTGTGCCCTTCCTGCACTGGGAGGCCCCGGTCACCTCACACTCACTCACTGCCAGGGAGGTGATGAGCACACCAGTGACCTGCCTGAG GCGGCGTGAGAAGGTCGGCGTCATTGTGGACGTGCTGAGCGACACGGCGTCCAATCACAACGGCTTCCCCGTGGTGGAGCATGCCGATGA CACCCAGCCTGCCCGGCTCCAGGGCCTGATCCTGCGCTCCCAGCTCATCGTTCTCCTAAAGCACAAGGTGTTTGTGGAGCGGTCCAACCT GGGCCTGGTACAGCGGCGCCTGAGGCTGAAGGACTTCCGAGACGCCTACCCGCGCTTCCCACCCATCCAGTCCATCCACGTGTCCCAGGA CGAGCGGGAGTGCACCATGGACCTCTCCGAGTTCATGAACCCCTCCCCCTACACGGTGCCCCAGGCATGCGTCGCTCCCACGGGTGTTCA AGCTGTTCCGGGCCCTGGGCCTGCGGCACCTGGTGGTGGTGGACAACCGCAATCAGGTTGTCGGGTTGGTGACCAGGAAGGACCTCGCCA GGTACCGCCTGGGAAAGAGAGGCTTGGAGGAGCTCTCGCTGGCCCAGACGTGAGGCCCAGCCCTGCCCATAATGGGCACTGGCGCTGGCA CCCCGGCCCTTCTGCATTTCCTCCCGGAGTCACTGGTTTCTCGGCCCAAACCATGCTCCCCAGCAGTGGCAATGGCGAGCACCCTGCAGC TGGGCGGGCAGGCGGCAGGCGCGGAACTGACCCTCTCGCGGGACTGACCCTGTTGTGGGCAGTGGTCTCCCCCCTTGGCGCCTCCTTGCG CAGGCCCAGCCTCCACTCTCCTCGTCTAGGTTTCTTTACCTCCAGGGATCAGCTGTGTGTGTGTGACCTCCCTACCGGGCTATCGGCCTC TTGGGAGCCAGCGGCAGGGCCGGCACCTGCGTGCCTGTGCCCGTGTGCGTGAGACAGAGCCCTTGCCCCTGCTGCTGCCCCGAGGGCTGC CCTGCCCTGGAAGGGCCCCTCTGCCTCCACACCAGTGGAGTCTTCGAGACTTGGGAGCTGCTTGGCCTCATTTTCAGCCATGAGCAGACG GCCTGTGGTCCCTGGGCCTGAGGCACGGACTCGTAGCACCAGGGTTTGGAGGCTGCGACCGCCCCGGAGAGCAGCTTCACACTGGCGCCA CAGAGGAGCCCCACGTGCACTCCCCGGCCTGCATCCGGCTTGGGTACACAGGCCCAGAGGACTGGGGTGACTCACGGGCCCTGTGCTGTG ATGTTGAGAGCTGAGAAAAACCTCCAAGGCCCTGAGCCCCATGCCCAGCCCTGCCTTGGTCCCCCAACCCCCAGAGCTTGGAGTCTGGGC CCCACACCCAGCCCTGCCTTGGTCCCTGAGCCTCAGAGCGTGGAATTGCTGCCCTGTGGACACTGGCTGGGAAGGCAGGTCTTCCCCTAG CACATGGGGACCCCGGCCTCGAGGGTGACCTCCCTACCCCGCCCCTGCCAGCCACCAAGCGCAGGTGCAGCGGGGGCCAGACTCCTGCCG GCCTCAGAGGACACCTGGCCCAGCACAGGCAGCTAGAAGGGCCGGTGGGCACCGGGGCCGGGAAGCCCCCACCTCACCACCTGAGGGCCC CTGGGAGGCTCCTCTGGCCTGGCTGGGCTGGGTCTGGGGCCGCCACAGGCCCCTCACGGGGCGGCAGAGGCAACTTCAGTGTCCCTGTTA GAGCAACACGGGTCCCTCCGTGGGGGGCTGGGTGCGGCCCCCTGCCGTGTATTTCCTCCCCAGGGAGTGGGGCCTCCCCGGGAGCTGACG >In-frame_ENST00000353660_ENST00000262318_TCGA-5M-AAT4-01A_RBCK1_chr20_400375_+_CLCN7_chr16_1509188_length(amino acids)=937AA_start in transcript=568_stop in transcript=3381 MGTATPDGREDQERLWVSVEDAQMHTVTIWLTVRPDMTVASLKDMVFLDYGFPPVLQQWVIGQRLARDQETLHSHGVRQNGDSAYLYLLS ARNTSLNPQELQRERQLRMLEDLGFKDLTLQPRGPLEPGPPKPGVPQEPGRGQPDAVPEPPPVGWQCPGCTFINKPTRPGCEMCCRARPE AYQVPASYQPDEEERARLAGEEEALRQYQQPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSVIA AGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLNFVLSIYHGN MWDLSSPGLINFGRFDSEKMAYTIHEIPVFIAMGVVGGVLGAVFNALNYWLTMFRIRYIHRPCLQVIEAVLVAAVTATVAFVLIYSSRDC QPLQGGSMSYPLQLFCADGEYNSMAAAFFNTPEKSVVSLFHDPPGSYNPLTLGLFTLVYFFLACWTYGLTVSAGVFIPSLLIGAAWGRLF GISLSYLTGAAIWADPGKYALMGAAAQLGGIVRMTLSLTVIMMEATSNVTYGFPIMLVLMTAKIVGDVFIEGLYDMHIQLQSVPFLHWEA PVTSHSLTAREVMSTPVTCLRRREKVGVIVDVLSDTASNHNGFPVVEHADDTQPARLQGLILRSQLIVLLKHKVFVERSNLGLVQRRLRL KDFRDAYPRFPPIQSIHVSQDERECTMDLSEFMNPSPYTVPQACVAPTGVQAVPGPGPAAPGGGGQPQSGCRVGDQEGPRQVPPGKERLG GALAGPDVRPSPAHNGHWRWHPGPSAFPPGVTGFSAQTMLPSSGNGEHPAAGRAGGRRGTDPLAGLTLLWAVVSPLGASLRRPSLHSPRL -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for RBCK1-CLCN7 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000356286 | + | 6 | 12 | 1_220 | 252.0 | 511.0 | IRF3 |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000353660 | + | 5 | 11 | 69_131 | 210.0 | 469.0 | RNF31 |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000356286 | + | 6 | 12 | 69_131 | 252.0 | 511.0 | RNF31 |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000353660 | + | 5 | 11 | 1_220 | 210.0 | 469.0 | IRF3 |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000353660 | + | 5 | 11 | 1_270 | 210.0 | 469.0 | TAB2 |
Hgene | RBCK1 | chr20:400375 | chr16:1509188 | ENST00000356286 | + | 6 | 12 | 1_270 | 252.0 | 511.0 | TAB2 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for RBCK1-CLCN7 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for RBCK1-CLCN7 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | RBCK1 | C4014605 | POLYGLUCOSAN BODY MYOPATHY 1 WITH OR WITHOUT IMMUNODEFICIENCY | 5 | GENOMICS_ENGLAND;UNIPROT |
Hgene | RBCK1 | C4751567 | Polyglucosan body myopathy type 1 | 2 | ORPHANET |
Hgene | RBCK1 | C0018800 | Cardiomegaly | 1 | CTD_human |
Hgene | RBCK1 | C1383860 | Cardiac Hypertrophy | 1 | CTD_human |
Tgene | CLCN7 | C1969106 | Osteopetrosis, Autosomal Recessive 4 | 7 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Tgene | CLCN7 | C3179239 | Osteopetrosis Autosomal Dominant Type 2 | 5 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Tgene | CLCN7 | C1318518 | Infantile malignant osteopetrosis | 3 | ORPHANET |
Tgene | CLCN7 | C0432261 | Osteopetrosis - intermediate type | 1 | ORPHANET |
Tgene | CLCN7 | C1969093 | Osteopetrosis, Autosomal Recessive 6 | 1 | ORPHANET |