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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:RBM14-C11orf80 (FusionGDB2 ID:72318) |
Fusion Gene Summary for RBM14-C11orf80 |
Fusion gene summary |
Fusion gene information | Fusion gene name: RBM14-C11orf80 | Fusion gene ID: 72318 | Hgene | Tgene | Gene symbol | RBM14 | C11orf80 | Gene ID | 100526737 | 79703 |
Gene name | RBM14-RBM4 readthrough | chromosome 11 open reading frame 80 | |
Synonyms | COAZ|PSP2|RBM14|SIP | HYDM4|TOP6BL|TOPOVIBL | |
Cytomap | 11q13.2 | 11q13.2 | |
Type of gene | protein-coding | protein-coding | |
Description | RBM14-RBM4 proteinParaspeckle protein 2RBM14/RBM4 fusionRNA-binding motif protein 14RNA-binding protein 14RRM-containing coactivator activator/modulatorSYT-interacting proteinSynaptotagmin-interacting proteintranscriptional coactivator CoAZ | type 2 DNA topoisomerase 6 subunit B-liketype 2 DNA topoisomerase VI subunit B-like | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000310137, ENST00000393979, ENST00000409372, ENST00000443702, ENST00000409738, ENST00000461478, | ENST00000346672, ENST00000360962, ENST00000527634, ENST00000540737, ENST00000532565, ENST00000525449, ENST00000527368, | |
Fusion gene scores | * DoF score | 12 X 5 X 10=600 | 19 X 19 X 10=3610 |
# samples | 13 | 24 | |
** MAII score | log2(13/600*10)=-2.20645087746743 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(24/3610*10)=-3.91089252616601 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: RBM14 [Title/Abstract] AND C11orf80 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | C11orf80(66595835)-RBM14(66391685), # samples:3 RBM14(66384528)-C11orf80(66526514), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | C11orf80-RBM14 seems lost the major protein functional domain in Tgene partner, which is a tumor suppressor due to the frame-shifted ORF. C11orf80-RBM14 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across RBM14 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across C11orf80 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | GBM | TCGA-06-2559-01A | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
ChimerDB4 | GBM | TCGA-06-2570-01A | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
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Fusion Gene ORF analysis for RBM14-C11orf80 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000310137 | ENST00000346672 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
In-frame | ENST00000310137 | ENST00000360962 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000310137 | ENST00000527634 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000310137 | ENST00000540737 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000310137 | ENST00000532565 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000310137 | ENST00000525449 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-3UTR | ENST00000310137 | ENST00000527368 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
In-frame | ENST00000393979 | ENST00000346672 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
In-frame | ENST00000393979 | ENST00000360962 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000393979 | ENST00000527634 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000393979 | ENST00000540737 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000393979 | ENST00000532565 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000393979 | ENST00000525449 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-3UTR | ENST00000393979 | ENST00000527368 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
In-frame | ENST00000409372 | ENST00000346672 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
In-frame | ENST00000409372 | ENST00000360962 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000409372 | ENST00000527634 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000409372 | ENST00000540737 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000409372 | ENST00000532565 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000409372 | ENST00000525449 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-3UTR | ENST00000409372 | ENST00000527368 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
In-frame | ENST00000443702 | ENST00000346672 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
In-frame | ENST00000443702 | ENST00000360962 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000443702 | ENST00000527634 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000443702 | ENST00000540737 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000443702 | ENST00000532565 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000443702 | ENST00000525449 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-3UTR | ENST00000443702 | ENST00000527368 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
In-frame | ENST00000409738 | ENST00000346672 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
In-frame | ENST00000409738 | ENST00000360962 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000409738 | ENST00000527634 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000409738 | ENST00000540737 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000409738 | ENST00000532565 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-5UTR | ENST00000409738 | ENST00000525449 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
5CDS-3UTR | ENST00000409738 | ENST00000527368 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
intron-3CDS | ENST00000461478 | ENST00000346672 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
intron-3CDS | ENST00000461478 | ENST00000360962 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
intron-5UTR | ENST00000461478 | ENST00000527634 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
intron-5UTR | ENST00000461478 | ENST00000540737 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
intron-5UTR | ENST00000461478 | ENST00000532565 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
intron-5UTR | ENST00000461478 | ENST00000525449 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
intron-3UTR | ENST00000461478 | ENST00000527368 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000310137 | RBM14 | chr11 | 66384528 | + | ENST00000346672 | C11orf80 | chr11 | 66526514 | + | 2027 | 476 | 1 | 1932 | 643 |
ENST00000310137 | RBM14 | chr11 | 66384528 | + | ENST00000360962 | C11orf80 | chr11 | 66526514 | + | 2323 | 476 | 1 | 2040 | 679 |
ENST00000393979 | RBM14 | chr11 | 66384528 | + | ENST00000346672 | C11orf80 | chr11 | 66526514 | + | 1983 | 432 | 8 | 1888 | 626 |
ENST00000393979 | RBM14 | chr11 | 66384528 | + | ENST00000360962 | C11orf80 | chr11 | 66526514 | + | 2279 | 432 | 8 | 1996 | 662 |
ENST00000409372 | RBM14 | chr11 | 66384528 | + | ENST00000346672 | C11orf80 | chr11 | 66526514 | + | 1979 | 428 | 4 | 1884 | 626 |
ENST00000409372 | RBM14 | chr11 | 66384528 | + | ENST00000360962 | C11orf80 | chr11 | 66526514 | + | 2275 | 428 | 4 | 1992 | 662 |
ENST00000443702 | RBM14 | chr11 | 66384528 | + | ENST00000346672 | C11orf80 | chr11 | 66526514 | + | 1963 | 412 | 18 | 1868 | 616 |
ENST00000443702 | RBM14 | chr11 | 66384528 | + | ENST00000360962 | C11orf80 | chr11 | 66526514 | + | 2259 | 412 | 18 | 1976 | 652 |
ENST00000409738 | RBM14 | chr11 | 66384528 | + | ENST00000346672 | C11orf80 | chr11 | 66526514 | + | 1894 | 343 | 6 | 1799 | 597 |
ENST00000409738 | RBM14 | chr11 | 66384528 | + | ENST00000360962 | C11orf80 | chr11 | 66526514 | + | 2190 | 343 | 6 | 1907 | 633 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000310137 | ENST00000346672 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + | 0.016095888 | 0.9839041 |
ENST00000310137 | ENST00000360962 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + | 0.015212262 | 0.9847877 |
ENST00000393979 | ENST00000346672 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + | 0.016064413 | 0.9839356 |
ENST00000393979 | ENST00000360962 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + | 0.015197619 | 0.9848024 |
ENST00000409372 | ENST00000346672 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + | 0.015976783 | 0.9840232 |
ENST00000409372 | ENST00000360962 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + | 0.015140559 | 0.9848594 |
ENST00000443702 | ENST00000346672 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + | 0.01593587 | 0.9840641 |
ENST00000443702 | ENST00000360962 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + | 0.015028498 | 0.98497146 |
ENST00000409738 | ENST00000346672 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + | 0.016984658 | 0.98301536 |
ENST00000409738 | ENST00000360962 | RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526514 | + | 0.015812542 | 0.9841875 |
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Fusion Genomic Features for RBM14-C11orf80 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526513 | + | 1.58E-13 | 1 |
RBM14 | chr11 | 66384528 | + | C11orf80 | chr11 | 66526513 | + | 1.58E-13 | 1 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for RBM14-C11orf80 |
Go to FGviewer for the breakpoints of chr11:66384528-chr11:66526514 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | RBM14 | chr11:66384528 | chr11:66526514 | ENST00000310137 | + | 1 | 3 | 1_73 | 112.33333333333333 | 670.0 | Domain | RRM 1 |
Hgene | RBM14 | chr11:66384528 | chr11:66526514 | ENST00000393979 | + | 1 | 3 | 1_73 | 112.33333333333333 | 157.0 | Domain | RRM 1 |
Hgene | RBM14 | chr11:66384528 | chr11:66526514 | ENST00000409738 | + | 1 | 2 | 1_73 | 112.33333333333333 | 120.0 | Domain | RRM 1 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | RBM14 | chr11:66384528 | chr11:66526514 | ENST00000310137 | + | 1 | 3 | 224_569 | 112.33333333333333 | 670.0 | Compositional bias | Note=Ala-rich |
Hgene | RBM14 | chr11:66384528 | chr11:66526514 | ENST00000393979 | + | 1 | 3 | 224_569 | 112.33333333333333 | 157.0 | Compositional bias | Note=Ala-rich |
Hgene | RBM14 | chr11:66384528 | chr11:66526514 | ENST00000409738 | + | 1 | 2 | 224_569 | 112.33333333333333 | 120.0 | Compositional bias | Note=Ala-rich |
Hgene | RBM14 | chr11:66384528 | chr11:66526514 | ENST00000310137 | + | 1 | 3 | 79_149 | 112.33333333333333 | 670.0 | Domain | RRM 2 |
Hgene | RBM14 | chr11:66384528 | chr11:66526514 | ENST00000393979 | + | 1 | 3 | 79_149 | 112.33333333333333 | 157.0 | Domain | RRM 2 |
Hgene | RBM14 | chr11:66384528 | chr11:66526514 | ENST00000409738 | + | 1 | 2 | 79_149 | 112.33333333333333 | 120.0 | Domain | RRM 2 |
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Fusion Gene Sequence for RBM14-C11orf80 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000310137_ENST00000346672_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(transcript)=2027nt_BP=476nt ATTGGCTAGGCCAGGGCGCCTGCGCGGCGGGGTTCTCGGTCGCCAGCCATTCCTGAGGAGGACTGCCGGTCGTTCGGACGTCTTGCCTGT CGCTGGAGGAGAGGTCCGGGCTCTCCAGGAAGGTGGCTGCGGCGACAAAATGAAGATATTCGTGGGCAACGTCGACGGGGCGGATACGAC TCCGGAGGAGCTGGCAGCCCTCTTTGCGCCCTACGGCACGGTCATGAGCTGCGCCGTCATGAAACAGTTCGCCTTCGTGCACATGCGCGA GAACGCGGGCGCGCTGCGCGCCATCGAAGCCCTGCACGGCCACGAGCTGCGGCCGGGGCGCGCGCTCGTGGTGGAGATGTCGCGCCCAAG GCCTCTTAATACTTGGAAGATTTTCGTGGGCAATGTGTCGGCTGCATGCACGAGCCAGGAACTGCGCAGCCTCTTCGAGCGCCGCGGACG CGTCATCGAGTGTGACGTGGTGAAAGTTGCTTCTGCAGGAAGCCTTTTTGGTGGCATGGTCCTCAAGAAGTTCCTAAAAGAAATACAGTC CATACTGCCCGGAATCTCTGCAAAGCTGACTTGGACTTCAGAGGAAGGCAGCTATTCTCAGGATATGACAGGGGTAACACCCTTCCAGAT GATTTTTGAGGTTGATGAAAAGCCCAGAACCTTGATGACAGATTGTCTGGTTATAAAGCATTTTTTACGTAAAATCATCATGGTGCACCC TAAGGTCAGATTTCATTTCAGTGTAAAGGTAAATGGAATCCTCTCCACAGAGATCTTTGGGGTGGAGAATGAACCCACTTTGAACCTTGG GAATGGAATTGCTCTTTTGGTCGACTCCCAGCATTATGTGAGTAGACCAAATTTTGGTACAATTGAATCACACTGCAGCAGAATTCACCC TGTGCTAGGACATCCAGTAATGCTTTTCATCCCTGAAGACGTGGCTGGCATGGACTTGTTGGGAGAACTGATACTGACTCCAGCAGCTGC ACTGTGCCCCAGCCCAAAGGTTTCTTCCAACCAGCTTAACAGGATTTCTTCAGTTTCCATATTTCTATATGGACCTTTGGGTCTGCCTCT GATATTGTCAACTTGGGAGCAGCCGATGACTACTTTCTTCAAAGATACCTCTTCTTTAGTTGACTGGAAAAAATACCATTTGTGTATGAT ACCCAATTTGGATCTCAATTTGGATAGAGATTTGGTGCTTCCAGATGTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGAC TATGGATCCTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGATTTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGT CTATACTTTGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAGCCACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGT CTTGGAGCAACATCACCAGGCTGCCAAGGCAGCTGACACACAAGAGTTCAGGACCAAACTGCACAAAGTATTTCGTGAGATCACCCAACA CCAATTTCTTCACCACTGCTCATGTGAGGTGAAGCAGCAGCTAACCCTAGAAAAAAAGGACTCAGCCCAGGGCACTGAGGACGCACCTGA TAACAGCAGCCTGGAGCTCCTAGCAGATACCAGCGGGCAAGCAGAAAACAAGAGGCTCAAGAGGGGCAGCCCCCGCATAGAGGAGATGCG AGCTCTGCGCTCTGCCAGGGCCCCGAGCCCGTCAGAGGCCGCCCCGCGCCGCCCGGAAGCCACCGCGGCCCCCCTCACTCCTAGAGGAAG GGAGCACCGCGAGGCTCACGGCAGGGCCCTGGCGCCGGGCAGGGCGAGCCTCGGAAGCCGCCTGGAGGACGTGCTGTGGCTGCAGGAGGT CTCCAACCTGTCAGAGTGGCTGAGTCCCAGCCCTGGGCCCTGAGCCGGGTCCCCTTCCGCAAGCGCCCACCGATCCGGAGGCTGCGGGCA >In-frame_ENST00000310137_ENST00000346672_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(amino acids)=643AA_start in transcript=1_stop in transcript=1932 LARPGRLRGGVLGRQPFLRRTAGRSDVLPVAGGEVRALQEGGCGDKMKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRE NAGALRAIEALHGHELRPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKVASAGSLFGGMVLKKFLKEIQS ILPGISAKLTWTSEEGSYSQDMTGVTPFQMIFEVDEKPRTLMTDCLVIKHFLRKIIMVHPKVRFHFSVKVNGILSTEIFGVENEPTLNLG NGIALLVDSQHYVSRPNFGTIESHCSRIHPVLGHPVMLFIPEDVAGMDLLGELILTPAAALCPSPKVSSNQLNRISSVSIFLYGPLGLPL ILSTWEQPMTTFFKDTSSLVDWKKYHLCMIPNLDLNLDRDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGV YTLLTTHLNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAADTQEFRTKLHKVFREITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPD NSSLELLADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLTPRGREHREAHGRALAPGRASLGSRLEDVLWLQEV -------------------------------------------------------------- >In-frame_ENST00000310137_ENST00000360962_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(transcript)=2323nt_BP=476nt ATTGGCTAGGCCAGGGCGCCTGCGCGGCGGGGTTCTCGGTCGCCAGCCATTCCTGAGGAGGACTGCCGGTCGTTCGGACGTCTTGCCTGT CGCTGGAGGAGAGGTCCGGGCTCTCCAGGAAGGTGGCTGCGGCGACAAAATGAAGATATTCGTGGGCAACGTCGACGGGGCGGATACGAC TCCGGAGGAGCTGGCAGCCCTCTTTGCGCCCTACGGCACGGTCATGAGCTGCGCCGTCATGAAACAGTTCGCCTTCGTGCACATGCGCGA GAACGCGGGCGCGCTGCGCGCCATCGAAGCCCTGCACGGCCACGAGCTGCGGCCGGGGCGCGCGCTCGTGGTGGAGATGTCGCGCCCAAG GCCTCTTAATACTTGGAAGATTTTCGTGGGCAATGTGTCGGCTGCATGCACGAGCCAGGAACTGCGCAGCCTCTTCGAGCGCCGCGGACG CGTCATCGAGTGTGACGTGGTGAAAGTTGCTTCTGCAGGAAGCCTTTTTGGTGGCATGGTCCTCAAGAAGTTCCTAAAAGAAATACAGTC CATACTGCCCGGAATCTCTGCAAAGCTGACTTGGACTTCAGAGGAAGGCAGCTATTCTCAGGATATGACAGGGGTAACACCCTTCCAGAT GATTTTTGAGGTTGATGAAAAGCCCAGAACCTTGATGACAGATTGTCTGGTTATAAAGCATTTTTTACGTAAAATCATCATGGTGCACCC TAAGGTCAGATTTCATTTCAGTGTAAAGGTAAATGGAATCCTCTCCACAGAGATCTTTGGGGTGGAGAATGAACCCACTTTGAACCTTGG GAATGGAATTGCTCTTTTGGTCGACTCCCAGCATTATGTGAGACCAAATTTTGGTACAATTGAATCACACTGCAGCAGAATTCACCCTGT GCTAGGACATCCAGTAATGCTTTTCATCCCTGAAGACGTGGCTGGCATGGACTTGTTGGGAGAACTGATACTGACTCCAGCAGCTGCACT GTGCCCCAGCCCAAAGGTTTCTTCCAACCAGCTTAACAGGATTTCTTCAGTTTCCATATTTCTATATGGACCTTTGGGTCTGCCTCTGAT ATTGTCAACTTGGGAGCAGCCGATGACTACTTTCTTCAAAGATACCTCTTCTTTAGTTGACTGGAAAAAATACCATTTGTGTATGATACC CAATTTGGATCTCAATTTGGATAGAGATTTGGTGCTTCCAGATGTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTAT GGATCCTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGATTTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTA TACTTTGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAGCCACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTT GGAGCAACATCACCAGGCTGCCAAGGCTCAGCAGAAACTACAGGCCTCACTCTCAGTGGCTGTGAACTCCATCATGAGTATTCTGACTGG AAGCACTAGGAGCAGCTTCCGAAAGATGTGTCTCCAGACCCTTCAAGCAGCTGACACACAAGAGTTCAGGACCAAACTGCACAAAGTATT TCGTGAGATCACCCAACACCAATTTCTTCACCACTGCTCATGTGAGGTGAAGCAGCAGCTAACCCTAGAAAAAAAGGACTCAGCCCAGGG CACTGAGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGCAGATACCAGCGGGCAAGCAGAAAACAAGAGGCTCAAGAGGGGCAGCCC CCGCATAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCCGAGCCCGTCAGAGGCCGCCCCGCGCCGCCCGGAAGCCACCGCGGCCCC CCTCACTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAGGGCCCTGGCGCCGGGCAGGGCGAGCCTCGGAAGCCGCCTGGAGGACGT GCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAGTCCCAGCCCTGGGCCCTGAGCCGGGTCCCCTTCCGCAAGCGCCCACCG ATCCGGAGGCTGCGGGCAGCCGTTATCCCGTGGTTTAATAAAGCTGCCGCGCGCTCACCAAGTCCTCTTCCGCGTCTGCTTCCGCGTCGG GCCCGGGCGGGGCGGGGCGGGGCGTGGAGCCGCGCCGCGGCCTGACGTCACCCACACCTCCCTGGGACTGCGTCACTGGTGCGCGCCGCG >In-frame_ENST00000310137_ENST00000360962_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(amino acids)=679AA_start in transcript=1_stop in transcript=2040 LARPGRLRGGVLGRQPFLRRTAGRSDVLPVAGGEVRALQEGGCGDKMKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRE NAGALRAIEALHGHELRPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKVASAGSLFGGMVLKKFLKEIQS ILPGISAKLTWTSEEGSYSQDMTGVTPFQMIFEVDEKPRTLMTDCLVIKHFLRKIIMVHPKVRFHFSVKVNGILSTEIFGVENEPTLNLG NGIALLVDSQHYVRPNFGTIESHCSRIHPVLGHPVMLFIPEDVAGMDLLGELILTPAAALCPSPKVSSNQLNRISSVSIFLYGPLGLPLI LSTWEQPMTTFFKDTSSLVDWKKYHLCMIPNLDLNLDRDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVY TLLTTHLNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAQQKLQASLSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVF REITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAP -------------------------------------------------------------- >In-frame_ENST00000393979_ENST00000346672_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(transcript)=1983nt_BP=432nt AGCCATTCCTGAGGAGGACTGCCGGTCGTTCGGACGTCTTGCCTGTCGCTGGAGGAGAGGTCCGGGCTCTCCAGGAAGGTGGCTGCGGCG ACAAAATGAAGATATTCGTGGGCAACGTCGACGGGGCGGATACGACTCCGGAGGAGCTGGCAGCCCTCTTTGCGCCCTACGGCACGGTCA TGAGCTGCGCCGTCATGAAACAGTTCGCCTTCGTGCACATGCGCGAGAACGCGGGCGCGCTGCGCGCCATCGAAGCCCTGCACGGCCACG AGCTGCGGCCGGGGCGCGCGCTCGTGGTGGAGATGTCGCGCCCAAGGCCTCTTAATACTTGGAAGATTTTCGTGGGCAATGTGTCGGCTG CATGCACGAGCCAGGAACTGCGCAGCCTCTTCGAGCGCCGCGGACGCGTCATCGAGTGTGACGTGGTGAAAGTTGCTTCTGCAGGAAGCC TTTTTGGTGGCATGGTCCTCAAGAAGTTCCTAAAAGAAATACAGTCCATACTGCCCGGAATCTCTGCAAAGCTGACTTGGACTTCAGAGG AAGGCAGCTATTCTCAGGATATGACAGGGGTAACACCCTTCCAGATGATTTTTGAGGTTGATGAAAAGCCCAGAACCTTGATGACAGATT GTCTGGTTATAAAGCATTTTTTACGTAAAATCATCATGGTGCACCCTAAGGTCAGATTTCATTTCAGTGTAAAGGTAAATGGAATCCTCT CCACAGAGATCTTTGGGGTGGAGAATGAACCCACTTTGAACCTTGGGAATGGAATTGCTCTTTTGGTCGACTCCCAGCATTATGTGAGTA GACCAAATTTTGGTACAATTGAATCACACTGCAGCAGAATTCACCCTGTGCTAGGACATCCAGTAATGCTTTTCATCCCTGAAGACGTGG CTGGCATGGACTTGTTGGGAGAACTGATACTGACTCCAGCAGCTGCACTGTGCCCCAGCCCAAAGGTTTCTTCCAACCAGCTTAACAGGA TTTCTTCAGTTTCCATATTTCTATATGGACCTTTGGGTCTGCCTCTGATATTGTCAACTTGGGAGCAGCCGATGACTACTTTCTTCAAAG ATACCTCTTCTTTAGTTGACTGGAAAAAATACCATTTGTGTATGATACCCAATTTGGATCTCAATTTGGATAGAGATTTGGTGCTTCCAG ATGTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATCCTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGG ATTTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTTTGCTCACAACTCATCTCAATGCCATCCTTGTGGAGA GCCACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGCAACATCACCAGGCTGCCAAGGCAGCTGACACACAAG AGTTCAGGACCAAACTGCACAAAGTATTTCGTGAGATCACCCAACACCAATTTCTTCACCACTGCTCATGTGAGGTGAAGCAGCAGCTAA CCCTAGAAAAAAAGGACTCAGCCCAGGGCACTGAGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGCAGATACCAGCGGGCAAGCAG AAAACAAGAGGCTCAAGAGGGGCAGCCCCCGCATAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCCGAGCCCGTCAGAGGCCGCCC CGCGCCGCCCGGAAGCCACCGCGGCCCCCCTCACTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAGGGCCCTGGCGCCGGGCAGGG CGAGCCTCGGAAGCCGCCTGGAGGACGTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAGTCCCAGCCCTGGGCCCTGAG CCGGGTCCCCTTCCGCAAGCGCCCACCGATCCGGAGGCTGCGGGCAGCCGTTATCCCGTGGTTTAATAAAGCTGCCGCGCGCTCACCAAG >In-frame_ENST00000393979_ENST00000346672_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(amino acids)=626AA_start in transcript=8_stop in transcript=1888 MRRTAGRSDVLPVAGGEVRALQEGGCGDKMKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHELR PGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKVASAGSLFGGMVLKKFLKEIQSILPGISAKLTWTSEEGS YSQDMTGVTPFQMIFEVDEKPRTLMTDCLVIKHFLRKIIMVHPKVRFHFSVKVNGILSTEIFGVENEPTLNLGNGIALLVDSQHYVSRPN FGTIESHCSRIHPVLGHPVMLFIPEDVAGMDLLGELILTPAAALCPSPKVSSNQLNRISSVSIFLYGPLGLPLILSTWEQPMTTFFKDTS SLVDWKKYHLCMIPNLDLNLDRDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTHLNAILVESHS VVQGSIQFTVDKVLEQHHQAAKAADTQEFRTKLHKVFREITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENK -------------------------------------------------------------- >In-frame_ENST00000393979_ENST00000360962_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(transcript)=2279nt_BP=432nt AGCCATTCCTGAGGAGGACTGCCGGTCGTTCGGACGTCTTGCCTGTCGCTGGAGGAGAGGTCCGGGCTCTCCAGGAAGGTGGCTGCGGCG ACAAAATGAAGATATTCGTGGGCAACGTCGACGGGGCGGATACGACTCCGGAGGAGCTGGCAGCCCTCTTTGCGCCCTACGGCACGGTCA TGAGCTGCGCCGTCATGAAACAGTTCGCCTTCGTGCACATGCGCGAGAACGCGGGCGCGCTGCGCGCCATCGAAGCCCTGCACGGCCACG AGCTGCGGCCGGGGCGCGCGCTCGTGGTGGAGATGTCGCGCCCAAGGCCTCTTAATACTTGGAAGATTTTCGTGGGCAATGTGTCGGCTG CATGCACGAGCCAGGAACTGCGCAGCCTCTTCGAGCGCCGCGGACGCGTCATCGAGTGTGACGTGGTGAAAGTTGCTTCTGCAGGAAGCC TTTTTGGTGGCATGGTCCTCAAGAAGTTCCTAAAAGAAATACAGTCCATACTGCCCGGAATCTCTGCAAAGCTGACTTGGACTTCAGAGG AAGGCAGCTATTCTCAGGATATGACAGGGGTAACACCCTTCCAGATGATTTTTGAGGTTGATGAAAAGCCCAGAACCTTGATGACAGATT GTCTGGTTATAAAGCATTTTTTACGTAAAATCATCATGGTGCACCCTAAGGTCAGATTTCATTTCAGTGTAAAGGTAAATGGAATCCTCT CCACAGAGATCTTTGGGGTGGAGAATGAACCCACTTTGAACCTTGGGAATGGAATTGCTCTTTTGGTCGACTCCCAGCATTATGTGAGAC CAAATTTTGGTACAATTGAATCACACTGCAGCAGAATTCACCCTGTGCTAGGACATCCAGTAATGCTTTTCATCCCTGAAGACGTGGCTG GCATGGACTTGTTGGGAGAACTGATACTGACTCCAGCAGCTGCACTGTGCCCCAGCCCAAAGGTTTCTTCCAACCAGCTTAACAGGATTT CTTCAGTTTCCATATTTCTATATGGACCTTTGGGTCTGCCTCTGATATTGTCAACTTGGGAGCAGCCGATGACTACTTTCTTCAAAGATA CCTCTTCTTTAGTTGACTGGAAAAAATACCATTTGTGTATGATACCCAATTTGGATCTCAATTTGGATAGAGATTTGGTGCTTCCAGATG TGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATCCTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGATT TCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTTTGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAGCC ACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGCAACATCACCAGGCTGCCAAGGCTCAGCAGAAACTACAGG CCTCACTCTCAGTGGCTGTGAACTCCATCATGAGTATTCTGACTGGAAGCACTAGGAGCAGCTTCCGAAAGATGTGTCTCCAGACCCTTC AAGCAGCTGACACACAAGAGTTCAGGACCAAACTGCACAAAGTATTTCGTGAGATCACCCAACACCAATTTCTTCACCACTGCTCATGTG AGGTGAAGCAGCAGCTAACCCTAGAAAAAAAGGACTCAGCCCAGGGCACTGAGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGCAG ATACCAGCGGGCAAGCAGAAAACAAGAGGCTCAAGAGGGGCAGCCCCCGCATAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCCGA GCCCGTCAGAGGCCGCCCCGCGCCGCCCGGAAGCCACCGCGGCCCCCCTCACTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAGGG CCCTGGCGCCGGGCAGGGCGAGCCTCGGAAGCCGCCTGGAGGACGTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAGTC CCAGCCCTGGGCCCTGAGCCGGGTCCCCTTCCGCAAGCGCCCACCGATCCGGAGGCTGCGGGCAGCCGTTATCCCGTGGTTTAATAAAGC TGCCGCGCGCTCACCAAGTCCTCTTCCGCGTCTGCTTCCGCGTCGGGCCCGGGCGGGGCGGGGCGGGGCGTGGAGCCGCGCCGCGGCCTG ACGTCACCCACACCTCCCTGGGACTGCGTCACTGGTGCGCGCCGCGGGTCAGGGCGCAATGGCGGCGCTGGGCGGGGATGGGCTGCGACT >In-frame_ENST00000393979_ENST00000360962_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(amino acids)=662AA_start in transcript=8_stop in transcript=1996 MRRTAGRSDVLPVAGGEVRALQEGGCGDKMKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHELR PGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKVASAGSLFGGMVLKKFLKEIQSILPGISAKLTWTSEEGS YSQDMTGVTPFQMIFEVDEKPRTLMTDCLVIKHFLRKIIMVHPKVRFHFSVKVNGILSTEIFGVENEPTLNLGNGIALLVDSQHYVRPNF GTIESHCSRIHPVLGHPVMLFIPEDVAGMDLLGELILTPAAALCPSPKVSSNQLNRISSVSIFLYGPLGLPLILSTWEQPMTTFFKDTSS LVDWKKYHLCMIPNLDLNLDRDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTHLNAILVESHSV VQGSIQFTVDKVLEQHHQAAKAQQKLQASLSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVFREITQHQFLHHCSCEVK QQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLTPRGREHREAHGRALA -------------------------------------------------------------- >In-frame_ENST00000409372_ENST00000346672_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(transcript)=1979nt_BP=428nt ATTCCTGAGGAGGACTGCCGGTCGTTCGGACGTCTTGCCTGTCGCTGGAGGAGAGGTCCGGGCTCTCCAGGAAGGTGGCTGCGGCGACAA AATGAAGATATTCGTGGGCAACGTCGACGGGGCGGATACGACTCCGGAGGAGCTGGCAGCCCTCTTTGCGCCCTACGGCACGGTCATGAG CTGCGCCGTCATGAAACAGTTCGCCTTCGTGCACATGCGCGAGAACGCGGGCGCGCTGCGCGCCATCGAAGCCCTGCACGGCCACGAGCT GCGGCCGGGGCGCGCGCTCGTGGTGGAGATGTCGCGCCCAAGGCCTCTTAATACTTGGAAGATTTTCGTGGGCAATGTGTCGGCTGCATG CACGAGCCAGGAACTGCGCAGCCTCTTCGAGCGCCGCGGACGCGTCATCGAGTGTGACGTGGTGAAAGTTGCTTCTGCAGGAAGCCTTTT TGGTGGCATGGTCCTCAAGAAGTTCCTAAAAGAAATACAGTCCATACTGCCCGGAATCTCTGCAAAGCTGACTTGGACTTCAGAGGAAGG CAGCTATTCTCAGGATATGACAGGGGTAACACCCTTCCAGATGATTTTTGAGGTTGATGAAAAGCCCAGAACCTTGATGACAGATTGTCT GGTTATAAAGCATTTTTTACGTAAAATCATCATGGTGCACCCTAAGGTCAGATTTCATTTCAGTGTAAAGGTAAATGGAATCCTCTCCAC AGAGATCTTTGGGGTGGAGAATGAACCCACTTTGAACCTTGGGAATGGAATTGCTCTTTTGGTCGACTCCCAGCATTATGTGAGTAGACC AAATTTTGGTACAATTGAATCACACTGCAGCAGAATTCACCCTGTGCTAGGACATCCAGTAATGCTTTTCATCCCTGAAGACGTGGCTGG CATGGACTTGTTGGGAGAACTGATACTGACTCCAGCAGCTGCACTGTGCCCCAGCCCAAAGGTTTCTTCCAACCAGCTTAACAGGATTTC TTCAGTTTCCATATTTCTATATGGACCTTTGGGTCTGCCTCTGATATTGTCAACTTGGGAGCAGCCGATGACTACTTTCTTCAAAGATAC CTCTTCTTTAGTTGACTGGAAAAAATACCATTTGTGTATGATACCCAATTTGGATCTCAATTTGGATAGAGATTTGGTGCTTCCAGATGT GAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATCCTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGATTT CCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTTTGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAGCCA CAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGCAACATCACCAGGCTGCCAAGGCAGCTGACACACAAGAGTT CAGGACCAAACTGCACAAAGTATTTCGTGAGATCACCCAACACCAATTTCTTCACCACTGCTCATGTGAGGTGAAGCAGCAGCTAACCCT AGAAAAAAAGGACTCAGCCCAGGGCACTGAGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGCAGATACCAGCGGGCAAGCAGAAAA CAAGAGGCTCAAGAGGGGCAGCCCCCGCATAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCCGAGCCCGTCAGAGGCCGCCCCGCG CCGCCCGGAAGCCACCGCGGCCCCCCTCACTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAGGGCCCTGGCGCCGGGCAGGGCGAG CCTCGGAAGCCGCCTGGAGGACGTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAGTCCCAGCCCTGGGCCCTGAGCCGG >In-frame_ENST00000409372_ENST00000346672_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(amino acids)=626AA_start in transcript=4_stop in transcript=1884 MRRTAGRSDVLPVAGGEVRALQEGGCGDKMKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHELR PGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKVASAGSLFGGMVLKKFLKEIQSILPGISAKLTWTSEEGS YSQDMTGVTPFQMIFEVDEKPRTLMTDCLVIKHFLRKIIMVHPKVRFHFSVKVNGILSTEIFGVENEPTLNLGNGIALLVDSQHYVSRPN FGTIESHCSRIHPVLGHPVMLFIPEDVAGMDLLGELILTPAAALCPSPKVSSNQLNRISSVSIFLYGPLGLPLILSTWEQPMTTFFKDTS SLVDWKKYHLCMIPNLDLNLDRDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTHLNAILVESHS VVQGSIQFTVDKVLEQHHQAAKAADTQEFRTKLHKVFREITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENK -------------------------------------------------------------- >In-frame_ENST00000409372_ENST00000360962_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(transcript)=2275nt_BP=428nt ATTCCTGAGGAGGACTGCCGGTCGTTCGGACGTCTTGCCTGTCGCTGGAGGAGAGGTCCGGGCTCTCCAGGAAGGTGGCTGCGGCGACAA AATGAAGATATTCGTGGGCAACGTCGACGGGGCGGATACGACTCCGGAGGAGCTGGCAGCCCTCTTTGCGCCCTACGGCACGGTCATGAG CTGCGCCGTCATGAAACAGTTCGCCTTCGTGCACATGCGCGAGAACGCGGGCGCGCTGCGCGCCATCGAAGCCCTGCACGGCCACGAGCT GCGGCCGGGGCGCGCGCTCGTGGTGGAGATGTCGCGCCCAAGGCCTCTTAATACTTGGAAGATTTTCGTGGGCAATGTGTCGGCTGCATG CACGAGCCAGGAACTGCGCAGCCTCTTCGAGCGCCGCGGACGCGTCATCGAGTGTGACGTGGTGAAAGTTGCTTCTGCAGGAAGCCTTTT TGGTGGCATGGTCCTCAAGAAGTTCCTAAAAGAAATACAGTCCATACTGCCCGGAATCTCTGCAAAGCTGACTTGGACTTCAGAGGAAGG CAGCTATTCTCAGGATATGACAGGGGTAACACCCTTCCAGATGATTTTTGAGGTTGATGAAAAGCCCAGAACCTTGATGACAGATTGTCT GGTTATAAAGCATTTTTTACGTAAAATCATCATGGTGCACCCTAAGGTCAGATTTCATTTCAGTGTAAAGGTAAATGGAATCCTCTCCAC AGAGATCTTTGGGGTGGAGAATGAACCCACTTTGAACCTTGGGAATGGAATTGCTCTTTTGGTCGACTCCCAGCATTATGTGAGACCAAA TTTTGGTACAATTGAATCACACTGCAGCAGAATTCACCCTGTGCTAGGACATCCAGTAATGCTTTTCATCCCTGAAGACGTGGCTGGCAT GGACTTGTTGGGAGAACTGATACTGACTCCAGCAGCTGCACTGTGCCCCAGCCCAAAGGTTTCTTCCAACCAGCTTAACAGGATTTCTTC AGTTTCCATATTTCTATATGGACCTTTGGGTCTGCCTCTGATATTGTCAACTTGGGAGCAGCCGATGACTACTTTCTTCAAAGATACCTC TTCTTTAGTTGACTGGAAAAAATACCATTTGTGTATGATACCCAATTTGGATCTCAATTTGGATAGAGATTTGGTGCTTCCAGATGTGAG TTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATCCTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGATTTCCA CAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTTTGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAGCCACAG TGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGCAACATCACCAGGCTGCCAAGGCTCAGCAGAAACTACAGGCCTC ACTCTCAGTGGCTGTGAACTCCATCATGAGTATTCTGACTGGAAGCACTAGGAGCAGCTTCCGAAAGATGTGTCTCCAGACCCTTCAAGC AGCTGACACACAAGAGTTCAGGACCAAACTGCACAAAGTATTTCGTGAGATCACCCAACACCAATTTCTTCACCACTGCTCATGTGAGGT GAAGCAGCAGCTAACCCTAGAAAAAAAGGACTCAGCCCAGGGCACTGAGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGCAGATAC CAGCGGGCAAGCAGAAAACAAGAGGCTCAAGAGGGGCAGCCCCCGCATAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCCGAGCCC GTCAGAGGCCGCCCCGCGCCGCCCGGAAGCCACCGCGGCCCCCCTCACTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAGGGCCCT GGCGCCGGGCAGGGCGAGCCTCGGAAGCCGCCTGGAGGACGTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAGTCCCAG CCCTGGGCCCTGAGCCGGGTCCCCTTCCGCAAGCGCCCACCGATCCGGAGGCTGCGGGCAGCCGTTATCCCGTGGTTTAATAAAGCTGCC GCGCGCTCACCAAGTCCTCTTCCGCGTCTGCTTCCGCGTCGGGCCCGGGCGGGGCGGGGCGGGGCGTGGAGCCGCGCCGCGGCCTGACGT CACCCACACCTCCCTGGGACTGCGTCACTGGTGCGCGCCGCGGGTCAGGGCGCAATGGCGGCGCTGGGCGGGGATGGGCTGCGACTGCTG >In-frame_ENST00000409372_ENST00000360962_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(amino acids)=662AA_start in transcript=4_stop in transcript=1992 MRRTAGRSDVLPVAGGEVRALQEGGCGDKMKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHELR PGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKVASAGSLFGGMVLKKFLKEIQSILPGISAKLTWTSEEGS YSQDMTGVTPFQMIFEVDEKPRTLMTDCLVIKHFLRKIIMVHPKVRFHFSVKVNGILSTEIFGVENEPTLNLGNGIALLVDSQHYVRPNF GTIESHCSRIHPVLGHPVMLFIPEDVAGMDLLGELILTPAAALCPSPKVSSNQLNRISSVSIFLYGPLGLPLILSTWEQPMTTFFKDTSS LVDWKKYHLCMIPNLDLNLDRDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTHLNAILVESHSV VQGSIQFTVDKVLEQHHQAAKAQQKLQASLSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVFREITQHQFLHHCSCEVK QQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLTPRGREHREAHGRALA -------------------------------------------------------------- >In-frame_ENST00000443702_ENST00000346672_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(transcript)=1963nt_BP=412nt GCCGGTCGTTCGGACGTCTTGCCTGTCGCTGGAGGAGAGGTCCGGGCTCTCCAGGAAGGTGGCTGCGGCGACAAAATGAAGATATTCGTG GGCAACGTCGACGGGGCGGATACGACTCCGGAGGAGCTGGCAGCCCTCTTTGCGCCCTACGGCACGGTCATGAGCTGCGCCGTCATGAAA CAGTTCGCCTTCGTGCACATGCGCGAGAACGCGGGCGCGCTGCGCGCCATCGAAGCCCTGCACGGCCACGAGCTGCGGCCGGGGCGCGCG CTCGTGGTGGAGATGTCGCGCCCAAGGCCTCTTAATACTTGGAAGATTTTCGTGGGCAATGTGTCGGCTGCATGCACGAGCCAGGAACTG CGCAGCCTCTTCGAGCGCCGCGGACGCGTCATCGAGTGTGACGTGGTGAAAGTTGCTTCTGCAGGAAGCCTTTTTGGTGGCATGGTCCTC AAGAAGTTCCTAAAAGAAATACAGTCCATACTGCCCGGAATCTCTGCAAAGCTGACTTGGACTTCAGAGGAAGGCAGCTATTCTCAGGAT ATGACAGGGGTAACACCCTTCCAGATGATTTTTGAGGTTGATGAAAAGCCCAGAACCTTGATGACAGATTGTCTGGTTATAAAGCATTTT TTACGTAAAATCATCATGGTGCACCCTAAGGTCAGATTTCATTTCAGTGTAAAGGTAAATGGAATCCTCTCCACAGAGATCTTTGGGGTG GAGAATGAACCCACTTTGAACCTTGGGAATGGAATTGCTCTTTTGGTCGACTCCCAGCATTATGTGAGTAGACCAAATTTTGGTACAATT GAATCACACTGCAGCAGAATTCACCCTGTGCTAGGACATCCAGTAATGCTTTTCATCCCTGAAGACGTGGCTGGCATGGACTTGTTGGGA GAACTGATACTGACTCCAGCAGCTGCACTGTGCCCCAGCCCAAAGGTTTCTTCCAACCAGCTTAACAGGATTTCTTCAGTTTCCATATTT CTATATGGACCTTTGGGTCTGCCTCTGATATTGTCAACTTGGGAGCAGCCGATGACTACTTTCTTCAAAGATACCTCTTCTTTAGTTGAC TGGAAAAAATACCATTTGTGTATGATACCCAATTTGGATCTCAATTTGGATAGAGATTTGGTGCTTCCAGATGTGAGTTATCAGGTGGAA TCCAGTGAGGAGGATCAGTCTCAGACTATGGATCCTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGATTTCCACAGTGCATTTCCA GTCCAGCAAATGGAAATCTGGGGAGTCTATACTTTGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAGCCACAGTGTAGTGCAAGGT TCCATCCAATTCACTGTGGACAAGGTCTTGGAGCAACATCACCAGGCTGCCAAGGCAGCTGACACACAAGAGTTCAGGACCAAACTGCAC AAAGTATTTCGTGAGATCACCCAACACCAATTTCTTCACCACTGCTCATGTGAGGTGAAGCAGCAGCTAACCCTAGAAAAAAAGGACTCA GCCCAGGGCACTGAGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGCAGATACCAGCGGGCAAGCAGAAAACAAGAGGCTCAAGAGG GGCAGCCCCCGCATAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCCGAGCCCGTCAGAGGCCGCCCCGCGCCGCCCGGAAGCCACC GCGGCCCCCCTCACTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAGGGCCCTGGCGCCGGGCAGGGCGAGCCTCGGAAGCCGCCTG GAGGACGTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAGTCCCAGCCCTGGGCCCTGAGCCGGGTCCCCTTCCGCAAGC >In-frame_ENST00000443702_ENST00000346672_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(amino acids)=616AA_start in transcript=18_stop in transcript=1868 MPVAGGEVRALQEGGCGDKMKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHELRPGRALVVEMS RPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKVASAGSLFGGMVLKKFLKEIQSILPGISAKLTWTSEEGSYSQDMTGVTP FQMIFEVDEKPRTLMTDCLVIKHFLRKIIMVHPKVRFHFSVKVNGILSTEIFGVENEPTLNLGNGIALLVDSQHYVSRPNFGTIESHCSR IHPVLGHPVMLFIPEDVAGMDLLGELILTPAAALCPSPKVSSNQLNRISSVSIFLYGPLGLPLILSTWEQPMTTFFKDTSSLVDWKKYHL CMIPNLDLNLDRDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTHLNAILVESHSVVQGSIQFTV DKVLEQHHQAAKAADTQEFRTKLHKVFREITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRIE -------------------------------------------------------------- >In-frame_ENST00000443702_ENST00000360962_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(transcript)=2259nt_BP=412nt GCCGGTCGTTCGGACGTCTTGCCTGTCGCTGGAGGAGAGGTCCGGGCTCTCCAGGAAGGTGGCTGCGGCGACAAAATGAAGATATTCGTG GGCAACGTCGACGGGGCGGATACGACTCCGGAGGAGCTGGCAGCCCTCTTTGCGCCCTACGGCACGGTCATGAGCTGCGCCGTCATGAAA CAGTTCGCCTTCGTGCACATGCGCGAGAACGCGGGCGCGCTGCGCGCCATCGAAGCCCTGCACGGCCACGAGCTGCGGCCGGGGCGCGCG CTCGTGGTGGAGATGTCGCGCCCAAGGCCTCTTAATACTTGGAAGATTTTCGTGGGCAATGTGTCGGCTGCATGCACGAGCCAGGAACTG CGCAGCCTCTTCGAGCGCCGCGGACGCGTCATCGAGTGTGACGTGGTGAAAGTTGCTTCTGCAGGAAGCCTTTTTGGTGGCATGGTCCTC AAGAAGTTCCTAAAAGAAATACAGTCCATACTGCCCGGAATCTCTGCAAAGCTGACTTGGACTTCAGAGGAAGGCAGCTATTCTCAGGAT ATGACAGGGGTAACACCCTTCCAGATGATTTTTGAGGTTGATGAAAAGCCCAGAACCTTGATGACAGATTGTCTGGTTATAAAGCATTTT TTACGTAAAATCATCATGGTGCACCCTAAGGTCAGATTTCATTTCAGTGTAAAGGTAAATGGAATCCTCTCCACAGAGATCTTTGGGGTG GAGAATGAACCCACTTTGAACCTTGGGAATGGAATTGCTCTTTTGGTCGACTCCCAGCATTATGTGAGACCAAATTTTGGTACAATTGAA TCACACTGCAGCAGAATTCACCCTGTGCTAGGACATCCAGTAATGCTTTTCATCCCTGAAGACGTGGCTGGCATGGACTTGTTGGGAGAA CTGATACTGACTCCAGCAGCTGCACTGTGCCCCAGCCCAAAGGTTTCTTCCAACCAGCTTAACAGGATTTCTTCAGTTTCCATATTTCTA TATGGACCTTTGGGTCTGCCTCTGATATTGTCAACTTGGGAGCAGCCGATGACTACTTTCTTCAAAGATACCTCTTCTTTAGTTGACTGG AAAAAATACCATTTGTGTATGATACCCAATTTGGATCTCAATTTGGATAGAGATTTGGTGCTTCCAGATGTGAGTTATCAGGTGGAATCC AGTGAGGAGGATCAGTCTCAGACTATGGATCCTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGATTTCCACAGTGCATTTCCAGTC CAGCAAATGGAAATCTGGGGAGTCTATACTTTGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAGCCACAGTGTAGTGCAAGGTTCC ATCCAATTCACTGTGGACAAGGTCTTGGAGCAACATCACCAGGCTGCCAAGGCTCAGCAGAAACTACAGGCCTCACTCTCAGTGGCTGTG AACTCCATCATGAGTATTCTGACTGGAAGCACTAGGAGCAGCTTCCGAAAGATGTGTCTCCAGACCCTTCAAGCAGCTGACACACAAGAG TTCAGGACCAAACTGCACAAAGTATTTCGTGAGATCACCCAACACCAATTTCTTCACCACTGCTCATGTGAGGTGAAGCAGCAGCTAACC CTAGAAAAAAAGGACTCAGCCCAGGGCACTGAGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGCAGATACCAGCGGGCAAGCAGAA AACAAGAGGCTCAAGAGGGGCAGCCCCCGCATAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCCGAGCCCGTCAGAGGCCGCCCCG CGCCGCCCGGAAGCCACCGCGGCCCCCCTCACTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAGGGCCCTGGCGCCGGGCAGGGCG AGCCTCGGAAGCCGCCTGGAGGACGTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAGTCCCAGCCCTGGGCCCTGAGCC GGGTCCCCTTCCGCAAGCGCCCACCGATCCGGAGGCTGCGGGCAGCCGTTATCCCGTGGTTTAATAAAGCTGCCGCGCGCTCACCAAGTC CTCTTCCGCGTCTGCTTCCGCGTCGGGCCCGGGCGGGGCGGGGCGGGGCGTGGAGCCGCGCCGCGGCCTGACGTCACCCACACCTCCCTG GGACTGCGTCACTGGTGCGCGCCGCGGGTCAGGGCGCAATGGCGGCGCTGGGCGGGGATGGGCTGCGACTGCTGTCGGTGTCGCGGCCGG >In-frame_ENST00000443702_ENST00000360962_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(amino acids)=652AA_start in transcript=18_stop in transcript=1976 MPVAGGEVRALQEGGCGDKMKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHELRPGRALVVEMS RPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKVASAGSLFGGMVLKKFLKEIQSILPGISAKLTWTSEEGSYSQDMTGVTP FQMIFEVDEKPRTLMTDCLVIKHFLRKIIMVHPKVRFHFSVKVNGILSTEIFGVENEPTLNLGNGIALLVDSQHYVRPNFGTIESHCSRI HPVLGHPVMLFIPEDVAGMDLLGELILTPAAALCPSPKVSSNQLNRISSVSIFLYGPLGLPLILSTWEQPMTTFFKDTSSLVDWKKYHLC MIPNLDLNLDRDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTHLNAILVESHSVVQGSIQFTVD KVLEQHHQAAKAQQKLQASLSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVFREITQHQFLHHCSCEVKQQLTLEKKDS AQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLTPRGREHREAHGRALAPGRASLGSRL -------------------------------------------------------------- >In-frame_ENST00000409738_ENST00000346672_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(transcript)=1894nt_BP=343nt GACAAAATGAAGATATTCGTGGGCAACGTCGACGGGGCGGATACGACTCCGGAGGAGCTGGCAGCCCTCTTTGCGCCCTACGGCACGGTC ATGAGCTGCGCCGTCATGAAACAGTTCGCCTTCGTGCACATGCGCGAGAACGCGGGCGCGCTGCGCGCCATCGAAGCCCTGCACGGCCAC GAGCTGCGGCCGGGGCGCGCGCTCGTGGTGGAGATGTCGCGCCCAAGGCCTCTTAATACTTGGAAGATTTTCGTGGGCAATGTGTCGGCT GCATGCACGAGCCAGGAACTGCGCAGCCTCTTCGAGCGCCGCGGACGCGTCATCGAGTGTGACGTGGTGAAAGTTGCTTCTGCAGGAAGC CTTTTTGGTGGCATGGTCCTCAAGAAGTTCCTAAAAGAAATACAGTCCATACTGCCCGGAATCTCTGCAAAGCTGACTTGGACTTCAGAG GAAGGCAGCTATTCTCAGGATATGACAGGGGTAACACCCTTCCAGATGATTTTTGAGGTTGATGAAAAGCCCAGAACCTTGATGACAGAT TGTCTGGTTATAAAGCATTTTTTACGTAAAATCATCATGGTGCACCCTAAGGTCAGATTTCATTTCAGTGTAAAGGTAAATGGAATCCTC TCCACAGAGATCTTTGGGGTGGAGAATGAACCCACTTTGAACCTTGGGAATGGAATTGCTCTTTTGGTCGACTCCCAGCATTATGTGAGT AGACCAAATTTTGGTACAATTGAATCACACTGCAGCAGAATTCACCCTGTGCTAGGACATCCAGTAATGCTTTTCATCCCTGAAGACGTG GCTGGCATGGACTTGTTGGGAGAACTGATACTGACTCCAGCAGCTGCACTGTGCCCCAGCCCAAAGGTTTCTTCCAACCAGCTTAACAGG ATTTCTTCAGTTTCCATATTTCTATATGGACCTTTGGGTCTGCCTCTGATATTGTCAACTTGGGAGCAGCCGATGACTACTTTCTTCAAA GATACCTCTTCTTTAGTTGACTGGAAAAAATACCATTTGTGTATGATACCCAATTTGGATCTCAATTTGGATAGAGATTTGGTGCTTCCA GATGTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATCCTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTG GATTTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTTTGCTCACAACTCATCTCAATGCCATCCTTGTGGAG AGCCACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGCAACATCACCAGGCTGCCAAGGCAGCTGACACACAA GAGTTCAGGACCAAACTGCACAAAGTATTTCGTGAGATCACCCAACACCAATTTCTTCACCACTGCTCATGTGAGGTGAAGCAGCAGCTA ACCCTAGAAAAAAAGGACTCAGCCCAGGGCACTGAGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGCAGATACCAGCGGGCAAGCA GAAAACAAGAGGCTCAAGAGGGGCAGCCCCCGCATAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCCGAGCCCGTCAGAGGCCGCC CCGCGCCGCCCGGAAGCCACCGCGGCCCCCCTCACTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAGGGCCCTGGCGCCGGGCAGG GCGAGCCTCGGAAGCCGCCTGGAGGACGTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAGTCCCAGCCCTGGGCCCTGA GCCGGGTCCCCTTCCGCAAGCGCCCACCGATCCGGAGGCTGCGGGCAGCCGTTATCCCGTGGTTTAATAAAGCTGCCGCGCGCTCACCAA >In-frame_ENST00000409738_ENST00000346672_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(amino acids)=597AA_start in transcript=6_stop in transcript=1799 MKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHELRPGRALVVEMSRPRPLNTWKIFVGNVSAAC TSQELRSLFERRGRVIECDVVKVASAGSLFGGMVLKKFLKEIQSILPGISAKLTWTSEEGSYSQDMTGVTPFQMIFEVDEKPRTLMTDCL VIKHFLRKIIMVHPKVRFHFSVKVNGILSTEIFGVENEPTLNLGNGIALLVDSQHYVSRPNFGTIESHCSRIHPVLGHPVMLFIPEDVAG MDLLGELILTPAAALCPSPKVSSNQLNRISSVSIFLYGPLGLPLILSTWEQPMTTFFKDTSSLVDWKKYHLCMIPNLDLNLDRDLVLPDV SYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTHLNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAADTQEF RTKLHKVFREITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPR -------------------------------------------------------------- >In-frame_ENST00000409738_ENST00000360962_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(transcript)=2190nt_BP=343nt GACAAAATGAAGATATTCGTGGGCAACGTCGACGGGGCGGATACGACTCCGGAGGAGCTGGCAGCCCTCTTTGCGCCCTACGGCACGGTC ATGAGCTGCGCCGTCATGAAACAGTTCGCCTTCGTGCACATGCGCGAGAACGCGGGCGCGCTGCGCGCCATCGAAGCCCTGCACGGCCAC GAGCTGCGGCCGGGGCGCGCGCTCGTGGTGGAGATGTCGCGCCCAAGGCCTCTTAATACTTGGAAGATTTTCGTGGGCAATGTGTCGGCT GCATGCACGAGCCAGGAACTGCGCAGCCTCTTCGAGCGCCGCGGACGCGTCATCGAGTGTGACGTGGTGAAAGTTGCTTCTGCAGGAAGC CTTTTTGGTGGCATGGTCCTCAAGAAGTTCCTAAAAGAAATACAGTCCATACTGCCCGGAATCTCTGCAAAGCTGACTTGGACTTCAGAG GAAGGCAGCTATTCTCAGGATATGACAGGGGTAACACCCTTCCAGATGATTTTTGAGGTTGATGAAAAGCCCAGAACCTTGATGACAGAT TGTCTGGTTATAAAGCATTTTTTACGTAAAATCATCATGGTGCACCCTAAGGTCAGATTTCATTTCAGTGTAAAGGTAAATGGAATCCTC TCCACAGAGATCTTTGGGGTGGAGAATGAACCCACTTTGAACCTTGGGAATGGAATTGCTCTTTTGGTCGACTCCCAGCATTATGTGAGA CCAAATTTTGGTACAATTGAATCACACTGCAGCAGAATTCACCCTGTGCTAGGACATCCAGTAATGCTTTTCATCCCTGAAGACGTGGCT GGCATGGACTTGTTGGGAGAACTGATACTGACTCCAGCAGCTGCACTGTGCCCCAGCCCAAAGGTTTCTTCCAACCAGCTTAACAGGATT TCTTCAGTTTCCATATTTCTATATGGACCTTTGGGTCTGCCTCTGATATTGTCAACTTGGGAGCAGCCGATGACTACTTTCTTCAAAGAT ACCTCTTCTTTAGTTGACTGGAAAAAATACCATTTGTGTATGATACCCAATTTGGATCTCAATTTGGATAGAGATTTGGTGCTTCCAGAT GTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATCCTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGAT TTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTTTGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAGC CACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGCAACATCACCAGGCTGCCAAGGCTCAGCAGAAACTACAG GCCTCACTCTCAGTGGCTGTGAACTCCATCATGAGTATTCTGACTGGAAGCACTAGGAGCAGCTTCCGAAAGATGTGTCTCCAGACCCTT CAAGCAGCTGACACACAAGAGTTCAGGACCAAACTGCACAAAGTATTTCGTGAGATCACCCAACACCAATTTCTTCACCACTGCTCATGT GAGGTGAAGCAGCAGCTAACCCTAGAAAAAAAGGACTCAGCCCAGGGCACTGAGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGCA GATACCAGCGGGCAAGCAGAAAACAAGAGGCTCAAGAGGGGCAGCCCCCGCATAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCCG AGCCCGTCAGAGGCCGCCCCGCGCCGCCCGGAAGCCACCGCGGCCCCCCTCACTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAGG GCCCTGGCGCCGGGCAGGGCGAGCCTCGGAAGCCGCCTGGAGGACGTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAGT CCCAGCCCTGGGCCCTGAGCCGGGTCCCCTTCCGCAAGCGCCCACCGATCCGGAGGCTGCGGGCAGCCGTTATCCCGTGGTTTAATAAAG CTGCCGCGCGCTCACCAAGTCCTCTTCCGCGTCTGCTTCCGCGTCGGGCCCGGGCGGGGCGGGGCGGGGCGTGGAGCCGCGCCGCGGCCT GACGTCACCCACACCTCCCTGGGACTGCGTCACTGGTGCGCGCCGCGGGTCAGGGCGCAATGGCGGCGCTGGGCGGGGATGGGCTGCGAC >In-frame_ENST00000409738_ENST00000360962_TCGA-06-2559-01A_RBM14_chr11_66384528_+_C11orf80_chr11_66526514_length(amino acids)=633AA_start in transcript=6_stop in transcript=1907 MKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHELRPGRALVVEMSRPRPLNTWKIFVGNVSAAC TSQELRSLFERRGRVIECDVVKVASAGSLFGGMVLKKFLKEIQSILPGISAKLTWTSEEGSYSQDMTGVTPFQMIFEVDEKPRTLMTDCL VIKHFLRKIIMVHPKVRFHFSVKVNGILSTEIFGVENEPTLNLGNGIALLVDSQHYVRPNFGTIESHCSRIHPVLGHPVMLFIPEDVAGM DLLGELILTPAAALCPSPKVSSNQLNRISSVSIFLYGPLGLPLILSTWEQPMTTFFKDTSSLVDWKKYHLCMIPNLDLNLDRDLVLPDVS YQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTHLNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAQQKLQAS LSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVFREITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADT SGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLTPRGREHREAHGRALAPGRASLGSRLEDVLWLQEVSNLSEWLSPS -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for RBM14-C11orf80 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for RBM14-C11orf80 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for RBM14-C11orf80 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | C11orf80 | C0678213 | Complete hydatidiform mole | 1 | ORPHANET |