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 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:RERE-CYP4A11 (FusionGDB2 ID:73030) |
Fusion Gene Summary for RERE-CYP4A11 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: RERE-CYP4A11 | Fusion gene ID: 73030 | Hgene | Tgene | Gene symbol | RERE | CYP4A11 | Gene ID | 473 | 1579 |
| Gene name | arginine-glutamic acid dipeptide repeats | cytochrome P450 family 4 subfamily A member 11 | |
| Synonyms | ARG|ARP|ATN1L|DNB1|NEDBEH | CP4Y|CYP4A2|CYP4AII|CYPIVA11 | |
| Cytomap | 1p36.23 | 1p33 | |
| Type of gene | protein-coding | protein-coding | |
| Description | arginine-glutamic acid dipeptide repeats proteinarginine-glutamic acid dipeptide (RE) repeatsatrophin 2atrophin-1 like proteinatrophin-1 related protein | cytochrome P450 4A1120-HETE synthase20-hydroxyeicosatetraenoic acid synthaseP450HL-omegaalkane-1 monooxygenasecytochrome P-450HK-omegacytochrome P450, family 4, subfamily A, polypeptide 11cytochrome P450, subfamily IVA, polypeptide 11cytochrome P4 | |
| Modification date | 20200313 | 20200313 | |
| UniProtAcc | . | Q02928 | |
| Ensembl transtripts involved in fusion gene | ENST00000337907, ENST00000377464, ENST00000400907, ENST00000400908, ENST00000476556, ENST00000460659, | ENST00000310638, ENST00000371904, ENST00000462347, ENST00000371905, ENST00000496519, ENST00000457840, | |
| Fusion gene scores | * DoF score | 27 X 28 X 11=8316 | 1 X 1 X 1=1 |
| # samples | 43 | 1 | |
| ** MAII score | log2(43/8316*10)=-4.27348119326891 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(1/1*10)=3.32192809488736 | |
| Context | PubMed: RERE [Title/Abstract] AND CYP4A11 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | RERE(8525985)-CYP4A11(47403809), # samples:3 | ||
| Anticipated loss of major functional domain due to fusion event. | RERE-CYP4A11 seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Tgene | CYP4A11 | GO:0001676 | long-chain fatty acid metabolic process | 18433732 |
| Tgene | CYP4A11 | GO:0006691 | leukotriene metabolic process | 9799565 |
| Tgene | CYP4A11 | GO:0019369 | arachidonic acid metabolic process | 10660572 |
| Tgene | CYP4A11 | GO:0019373 | epoxygenase P450 pathway | 9618440 |
| Tgene | CYP4A11 | GO:0055114 | oxidation-reduction process | 9618440|9799565|18433732 |
| Fusion gene breakpoints across RERE (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene breakpoints across CYP4A11 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | BRCA | TCGA-D8-A1XZ-01A | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| ChimerDB4 | BRCA | TCGA-D8-A1XZ-01A | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| ChimerDB4 | BRCA | TCGA-D8-A1XZ-01A | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
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Fusion Gene ORF analysis for RERE-CYP4A11 |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000337907 | ENST00000310638 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| In-frame | ENST00000337907 | ENST00000371904 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| In-frame | ENST00000337907 | ENST00000462347 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| In-frame | ENST00000337907 | ENST00000371905 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| 5CDS-intron | ENST00000337907 | ENST00000496519 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| 5CDS-5UTR | ENST00000337907 | ENST00000457840 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| In-frame | ENST00000377464 | ENST00000310638 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| In-frame | ENST00000377464 | ENST00000371904 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| In-frame | ENST00000377464 | ENST00000462347 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| In-frame | ENST00000377464 | ENST00000371905 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| 5CDS-intron | ENST00000377464 | ENST00000496519 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| 5CDS-5UTR | ENST00000377464 | ENST00000457840 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| In-frame | ENST00000400907 | ENST00000310638 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| In-frame | ENST00000400907 | ENST00000371904 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| In-frame | ENST00000400907 | ENST00000462347 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| In-frame | ENST00000400907 | ENST00000371905 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| 5CDS-intron | ENST00000400907 | ENST00000496519 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| 5CDS-5UTR | ENST00000400907 | ENST00000457840 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| Frame-shift | ENST00000400908 | ENST00000310638 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| Frame-shift | ENST00000400908 | ENST00000371904 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| Frame-shift | ENST00000400908 | ENST00000462347 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| Frame-shift | ENST00000400908 | ENST00000371905 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| 5CDS-intron | ENST00000400908 | ENST00000496519 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| 5CDS-5UTR | ENST00000400908 | ENST00000457840 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| intron-3CDS | ENST00000476556 | ENST00000310638 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| intron-3CDS | ENST00000476556 | ENST00000371904 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| intron-3CDS | ENST00000476556 | ENST00000462347 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| intron-3CDS | ENST00000476556 | ENST00000371905 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| intron-intron | ENST00000476556 | ENST00000496519 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| intron-5UTR | ENST00000476556 | ENST00000457840 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| intron-3CDS | ENST00000460659 | ENST00000310638 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| intron-3CDS | ENST00000460659 | ENST00000371904 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| intron-3CDS | ENST00000460659 | ENST00000462347 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| intron-3CDS | ENST00000460659 | ENST00000371905 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| intron-intron | ENST00000460659 | ENST00000496519 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| intron-5UTR | ENST00000460659 | ENST00000457840 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000337907 | RERE | chr1 | 8525985 | - | ENST00000310638 | CYP4A11 | chr1 | 47403809 | - | 4141 | 1838 | 533 | 3202 | 889 |
| ENST00000337907 | RERE | chr1 | 8525985 | - | ENST00000371904 | CYP4A11 | chr1 | 47403809 | - | 3380 | 1838 | 533 | 3205 | 890 |
| ENST00000337907 | RERE | chr1 | 8525985 | - | ENST00000462347 | CYP4A11 | chr1 | 47403809 | - | 3387 | 1838 | 533 | 2908 | 791 |
| ENST00000337907 | RERE | chr1 | 8525985 | - | ENST00000371905 | CYP4A11 | chr1 | 47403809 | - | 3337 | 1838 | 533 | 3010 | 825 |
| ENST00000377464 | RERE | chr1 | 8525985 | - | ENST00000310638 | CYP4A11 | chr1 | 47403809 | - | 2857 | 554 | 155 | 1918 | 587 |
| ENST00000377464 | RERE | chr1 | 8525985 | - | ENST00000371904 | CYP4A11 | chr1 | 47403809 | - | 2096 | 554 | 155 | 1921 | 588 |
| ENST00000377464 | RERE | chr1 | 8525985 | - | ENST00000462347 | CYP4A11 | chr1 | 47403809 | - | 2103 | 554 | 155 | 1624 | 489 |
| ENST00000377464 | RERE | chr1 | 8525985 | - | ENST00000371905 | CYP4A11 | chr1 | 47403809 | - | 2053 | 554 | 155 | 1726 | 523 |
| ENST00000400907 | RERE | chr1 | 8525985 | - | ENST00000310638 | CYP4A11 | chr1 | 47403809 | - | 3580 | 1277 | 74 | 2641 | 855 |
| ENST00000400907 | RERE | chr1 | 8525985 | - | ENST00000371904 | CYP4A11 | chr1 | 47403809 | - | 2819 | 1277 | 74 | 2644 | 856 |
| ENST00000400907 | RERE | chr1 | 8525985 | - | ENST00000462347 | CYP4A11 | chr1 | 47403809 | - | 2826 | 1277 | 74 | 2347 | 757 |
| ENST00000400907 | RERE | chr1 | 8525985 | - | ENST00000371905 | CYP4A11 | chr1 | 47403809 | - | 2776 | 1277 | 74 | 2449 | 791 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000337907 | ENST00000310638 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - | 0.001417378 | 0.9985826 |
| ENST00000337907 | ENST00000371904 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - | 0.002346561 | 0.9976534 |
| ENST00000337907 | ENST00000462347 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - | 0.003002701 | 0.99699736 |
| ENST00000337907 | ENST00000371905 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - | 0.001988069 | 0.99801195 |
| ENST00000377464 | ENST00000310638 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - | 0.010778805 | 0.9892212 |
| ENST00000377464 | ENST00000371904 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - | 0.012364891 | 0.9876351 |
| ENST00000377464 | ENST00000462347 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - | 0.033593964 | 0.966406 |
| ENST00000377464 | ENST00000371905 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - | 0.011682247 | 0.9883178 |
| ENST00000400907 | ENST00000310638 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - | 0.001610611 | 0.99838936 |
| ENST00000400907 | ENST00000371904 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - | 0.00280792 | 0.9971921 |
| ENST00000400907 | ENST00000462347 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - | 0.00355919 | 0.9964408 |
| ENST00000400907 | ENST00000371905 | RERE | chr1 | 8525985 | - | CYP4A11 | chr1 | 47403809 | - | 0.002334131 | 0.9976659 |
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Fusion Genomic Features for RERE-CYP4A11 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for RERE-CYP4A11 |
| Go to FGviewer for the breakpoints of chr1:8525985-chr1:47403809 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | CYP4A11 |
| FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: A cytochrome P450 monooxygenase involved in the metabolism of fatty acids and their oxygenated derivatives (oxylipins) (PubMed:7679927, PubMed:1739747, PubMed:8914854, PubMed:10553002, PubMed:10660572, PubMed:15611369). Mechanistically, uses molecular oxygen inserting one oxygen atom into a substrate, and reducing the second into a water molecule, with two electrons provided by NADPH via cytochrome P450 reductase (CPR; NADPH-ferrihemoprotein reductase) (PubMed:7679927, PubMed:1739747, PubMed:8914854, PubMed:10553002, PubMed:10660572, PubMed:15611369). Catalyzes predominantly the oxidation of the terminal carbon (omega-oxidation) of saturated and unsaturated fatty acids, the catalytic efficiency decreasing in the following order: dodecanoic > tetradecanoic > (9Z)-octadecenoic > (9Z,12Z)-octadecadienoic > hexadecanoic acid (PubMed:10553002, PubMed:10660572). Acts as a major omega-hydroxylase for dodecanoic (lauric) acid in liver (PubMed:7679927, PubMed:1739747, PubMed:8914854, PubMed:15611369). Participates in omega-hydroxylation of (5Z,8Z,11Z,14Z)-eicosatetraenoic acid (arachidonate) to 20-hydroxyeicosatetraenoic acid (20-HETE), a signaling molecule acting both as vasoconstrictive and natriuretic with overall effect on arterial blood pressure (PubMed:10620324, PubMed:10660572, PubMed:15611369). Can also catalyze the oxidation of the penultimate carbon (omega-1 oxidation) of fatty acids with lower efficiency (PubMed:7679927). May contribute to the degradation of saturated very long-chain fatty acids (VLCFAs) such as docosanoic acid, by catalyzing successive omega-oxidations to the corresponding dicarboxylic acid, thereby initiating chain shortening (PubMed:18182499). Omega-hydroxylates (9R,10S)-epoxy-octadecanoate stereoisomer (PubMed:15145985). Plays a minor role in omega-oxidation of long-chain 3-hydroxy fatty acids (PubMed:18065749). Has little activity toward prostaglandins A1 and E1 (PubMed:7679927). {ECO:0000269|PubMed:10553002, ECO:0000269|PubMed:10620324, ECO:0000269|PubMed:10660572, ECO:0000269|PubMed:15145985, ECO:0000269|PubMed:15611369, ECO:0000269|PubMed:1739747, ECO:0000269|PubMed:18065749, ECO:0000269|PubMed:18182499, ECO:0000269|PubMed:7679927, ECO:0000269|PubMed:8914854}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000337907 | - | 12 | 24 | 103_283 | 401.0 | 1567.0 | Domain | BAH |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000337907 | - | 12 | 24 | 284_387 | 401.0 | 1567.0 | Domain | ELM2 |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000400908 | - | 11 | 23 | 103_283 | 401.0 | 1567.0 | Domain | BAH |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000400908 | - | 11 | 23 | 284_387 | 401.0 | 1567.0 | Domain | ELM2 |
| Tgene | CYP4A11 | chr1:8525985 | chr1:47403809 | ENST00000310638 | 0 | 12 | 131_134 | 65.0 | 520.0 | Compositional bias | Note=Poly-Leu | |
| Tgene | CYP4A11 | chr1:8525985 | chr1:47403809 | ENST00000371905 | 0 | 11 | 131_134 | 65.0 | 456.0 | Compositional bias | Note=Poly-Leu |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000337907 | - | 12 | 24 | 1156_1211 | 401.0 | 1567.0 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000400908 | - | 11 | 23 | 1156_1211 | 401.0 | 1567.0 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000476556 | - | 1 | 13 | 1156_1211 | 0 | 1013.0 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000337907 | - | 12 | 24 | 1179_1204 | 401.0 | 1567.0 | Compositional bias | Note=Arg/Glu-rich (mixed charge) |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000337907 | - | 12 | 24 | 1300_1322 | 401.0 | 1567.0 | Compositional bias | Note=Arg/Glu-rich (mixed charge) |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000337907 | - | 12 | 24 | 1425_1445 | 401.0 | 1567.0 | Compositional bias | Note=His-rich |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000337907 | - | 12 | 24 | 1451_1510 | 401.0 | 1567.0 | Compositional bias | Note=Pro-rich |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000337907 | - | 12 | 24 | 738_1118 | 401.0 | 1567.0 | Compositional bias | Note=Pro-rich |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000400908 | - | 11 | 23 | 1179_1204 | 401.0 | 1567.0 | Compositional bias | Note=Arg/Glu-rich (mixed charge) |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000400908 | - | 11 | 23 | 1300_1322 | 401.0 | 1567.0 | Compositional bias | Note=Arg/Glu-rich (mixed charge) |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000400908 | - | 11 | 23 | 1425_1445 | 401.0 | 1567.0 | Compositional bias | Note=His-rich |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000400908 | - | 11 | 23 | 1451_1510 | 401.0 | 1567.0 | Compositional bias | Note=Pro-rich |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000400908 | - | 11 | 23 | 738_1118 | 401.0 | 1567.0 | Compositional bias | Note=Pro-rich |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000476556 | - | 1 | 13 | 1179_1204 | 0 | 1013.0 | Compositional bias | Note=Arg/Glu-rich (mixed charge) |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000476556 | - | 1 | 13 | 1300_1322 | 0 | 1013.0 | Compositional bias | Note=Arg/Glu-rich (mixed charge) |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000476556 | - | 1 | 13 | 1425_1445 | 0 | 1013.0 | Compositional bias | Note=His-rich |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000476556 | - | 1 | 13 | 1451_1510 | 0 | 1013.0 | Compositional bias | Note=Pro-rich |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000476556 | - | 1 | 13 | 738_1118 | 0 | 1013.0 | Compositional bias | Note=Pro-rich |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000337907 | - | 12 | 24 | 391_443 | 401.0 | 1567.0 | Domain | SANT |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000400908 | - | 11 | 23 | 391_443 | 401.0 | 1567.0 | Domain | SANT |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000476556 | - | 1 | 13 | 103_283 | 0 | 1013.0 | Domain | BAH |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000476556 | - | 1 | 13 | 284_387 | 0 | 1013.0 | Domain | ELM2 |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000476556 | - | 1 | 13 | 391_443 | 0 | 1013.0 | Domain | SANT |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000337907 | - | 12 | 24 | 507_532 | 401.0 | 1567.0 | Zinc finger | Note=GATA-type |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000400908 | - | 11 | 23 | 507_532 | 401.0 | 1567.0 | Zinc finger | Note=GATA-type |
| Hgene | RERE | chr1:8525985 | chr1:47403809 | ENST00000476556 | - | 1 | 13 | 507_532 | 0 | 1013.0 | Zinc finger | Note=GATA-type |
| Tgene | CYP4A11 | chr1:8525985 | chr1:47403809 | ENST00000310638 | 0 | 12 | 24_31 | 65.0 | 520.0 | Compositional bias | Note=Poly-Leu | |
| Tgene | CYP4A11 | chr1:8525985 | chr1:47403809 | ENST00000371905 | 0 | 11 | 24_31 | 65.0 | 456.0 | Compositional bias | Note=Poly-Leu |
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Fusion Gene Sequence for RERE-CYP4A11 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >In-frame_ENST00000337907_ENST00000310638_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(transcript)=4141nt_BP=1838nt AAAATCACCATCATCCTCAGGGAGCCCCCTCGCCCTCGGAAAACAAAACCAGACATGATCCTGGGCTCCTGCTTCTGAAAGATCTGCCCG ACCGAGGAGGAGGGAGCCTAGGTTCAAGTCGCAGGAAAGGTCACGGCAGGGAAGCCCCCTCAGCCCCTCCGCGTCGCCTCCCCGCGGGCC GCCCCTCTCGGCCCTGCGCCCCGCGGCCCCGCAGCCTCCGCGCGGCCTCCCGCCCCATCCCCGCCACTTTCCCCGGAGCTGGGCCGCGAA CACCTCACTATTGATGGTGTAGCGCTTTAGGGGAAGGAGGTGATTGTCTAGGAGTAACTGTATGTGCGCTCAGCACCGGGTCACAACCAC CGTGGGATCCACTTACAGAGAAGATTTGTGGAGAGCTTCAGCCTGTTTATGGTGTTACTGAGAAAGGAATTGTGGCCATTTGATATAATT CTGGATGGAAGACCTCTTATTTGTATTACATTGAATTAGAGCATTTTTGAAACGTTGGGGTTGTTGGAGTGGTTGGATTTTCCCTGGAAT TGAGTGAGAAATTCAGAAGACTGAAGCCCAGGCTTACTGTCTACCTTTCACGGAGGCCTAGCCGTGAGAGGACAGAAGAAGGCACGTGGC GAATCATGACAGCGGACAAAGACAAAGACAAAGACAAAGAGAAGGACCGGGACCGAGACCGGGACCGAGAGAGAGAGAAAAGAGACAAAG CAAGAGAGAGTGAGAATTCAAGGCCACGCCGGAGCTGTACCTTGGAAGGAGGAGCCAAAAATTATGCTGAGAGTGATCACAGTGAAGACG AGGACAATGACAACAATAGTGCCACCGCAGAGGAGTCCACGAAGAAGAATAAGAAGAAACCACCGAAAAAAAAGTCTCGTTATGAAAGGA CAGATACCGGTGAGATAACATCCTACATCACTGAAGATGATGTGGTCTACAGACCAGGAGACTGTGTGTATATCGAGAGTCGGAGGCCAA ACACACCGTATTTCATCTGTAGCATTCAAGACTTCAAACTGGTCCACAACTCCCAGGCCTGTTGCAGATCTCCAACTCCTGCTTTGTGTG ACCCCCCAGCATGCTCTCTGCCGGTGGCATCACAGCCACCACAGCATCTTTCTGAAGCCGGGAGAGGGCCTGTAGGGAGTAAGAGGGACC ATCTCCTCATGAACGTCAAATGGTACTACCGTCAATCTGAGGTTCCAGATTCTGTGTATCAGCATTTGGTTCAGGATCGACATAATGAAA ATGACTCTGGAAGAGAACTTGTCATTACAGACCCAGTTATCAAGAACCGAGAGCTCTTCATTTCTGATTACGTTGACACTTACCATGCTG CTGCCCTTAGAGGGAAGTGTAACATCTCCCATTTTTCTGACATATTTGCTGCTAGAGAGTTTAAAGCCCGAGTGGATTCATTTTTCTACA TATTAGGATATAACCCTGAGACAAGGAGGCTGAACAGTACCCAGGGGGAGATTCGTGTCGGTCCTAGTCATCAGGCCAAACTTCCAGATC TGCAACCATTTCCTTCTCCAGATGGTGATACAGTGACCCAACATGAGGAACTGGTCTGGATGCCTGGAGTTAACGACTGTGACCTCCTTA TGTACTTGAGGGCAGCAAGGAGCATGGCGGCATTTGCAGGAATGTGTGATGGAGGCTCTACAGAGGACGGCTGTGTCGCAGCCTCTCGGG ATGACACCACTCTGAATGCACTGAACACACTGCATGAAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGC CCAAGCTCATCGAGAAGTGCTGGACCGAGGACGAAGTGCTCCAACAGGACCAGGAGCTACAACGGATTCAGAAATGGGTGGAGACATTCC CAAGTGCCTGTCCTCATTGGCTATGGGGAGGCAAAGTTCGTGTCCAGCTCTATGACCCTGACTATATGAAGGTGATTCTGGGGAGATCAG ACCCGAAATCCCATGGTTCCTACAGATTCCTGGCTCCATGGATTGGGTACGGCTTGCTCCTGTTGAATGGGCAGACATGGTTCCAGCATC GACGGATGCTGACCCCAGCCTTCCACTATGACATCCTGAAGCCCTATGTGGGGCTCATGGCAGACTCTGTACGAGTGATGCTGGACAAAT GGGAAGAGCTCCTTGGCCAGGATTCCCCTCTGGAGGTCTTTCAGCACGTCTCCTTGATGACCCTGGACACCATCATGAAGTGTGCCTTCA GCCATCAGGGCAGCATCCAGGTGGACAGGAATTCTCAGTCCTACATACAGGCCATTAGTGACCTGAACAACCTGGTTTTTTCCCGTGTGA GGAATGCCTTTCACCAGAATGACACCATCTACAGCCTGACCTCTGCTGGCCGCTGGACACACCGCGCCTGCCAGCTGGCCCATCAGCACA CAGACCAAGTGATCCAACTGAGGAAGGCTCAACTACAGAAGGAGGGGGAGCTGGAGAAGATCAAGAGGAAGAGGCATTTGGATTTTCTGG ATATCCTCCTCTTGGCCAAAATGGAGAATGGGAGCATCTTGTCAGACAAGGACCTCCGTGCTGAGGTGGACACGTTCATGTTTGAGGGCC ACGACACCACAGCCAGTGGGATCTCCTGGATCCTCTATGCTCTGGCCACACACCCCAAGCATCAGGAGAGGTGCCGGGAGGAGATCCACA GCCTCCTGGGTGATGGAGCCTCCATCACCTGGAACCACCTGGACCAGATGCCCTACACCACCATGTGCATTAAGGAGGCACTGAGGCTCT ACCCACCGGTGCCAGGCATTGGCAGAGAGCTCAGCACTCCCGTCACCTTCCCTGATGGGCGCTCCTTGCCCAAAGGTATCATGGTCCTCC TCTCCATTTATGGCCTTCACCACAACCCAAAAGTGTGGCCCAACCCAGAGGTGTTTGACCCTTTCCGTTTTGCACCGGGTTCTGCTCAAC ACAGCCACGCTTTCCTGCCCTTCTCAGGAGGATCAAGGAACTGCATCGGGAAACAATTTGCCATGAACGAGCTGAAGGTGGCCACGGCCC TGACCCTGCTCCGCTTTGAGCTGCTGCCTGATCCCACCAGGATCCCCATCCCCATTGCACGACTTGTGTTGAAATCCAAAAATGGAATCC ACCTGCGTCTCAGGAGGCTCCCTAACCCTTGTGAAGACAAGGACCAGCTTTGAGGGCCTCCACCTGCCGTCCTGTCTTCCTGACCCCCGC TTCTGTCCCCTTCCTGTCTGCCCATATCCTGTTTTCTGTCTGCCCACCTTCCCTTCTTCCCACCTGCCTGCTGTCCCCCAGTCTGCCTGC CCTTCTCTCTCTCACCTTTCTCCAGGCTCCCTACCTGCTTGTCTACCTGTCTCCTACCCACCTGTATCTCTTGTTGGGAGAAAAGCTGAG TGTTGGGAGAAGCTGAGGCCGAGCTTGCATGTCTGACATAATGTAAAAGAGTCTTGGATCATGTCCAGGATCCAGGGTCTAAAACCCCTT GTGGCCTTTGGAACACCAAGCTCTGTGCTGAAGGGTGGAAGGCTACCCTGACGCACCATAATCTAAGCCCGGGGCATAAAACCCCTCGTG GCTTGGATAGAATCCAGGGCTCGTGGCTCTGGAATGTGTCTGAACTTGCTGCCTCCTCGCTCCTTGCTCTCCCAGGATCAATTGTATCTT GAGTTAAAAGAACCTGCTCTCCATTATCTCAAGTAGCAGAGCAGATGCTAAACCGTCACAGCTGTAAATCATGTGCTTAATGCAACATGC CCTTTCGACCCCCACATTCTCACCACCTGTTTCTTTGTTTGATCACCAATAAATAATCTGCACTTCCAGAGCTCGGGGCCTTCACAGCCT CCATCCTTAGCTTTGGCGCCCTGGACCCACTTTCTCTCTCAAACTGTCTTTTCTCACTGCTTTGACTCTGCCGGACTTTGTCACCCCCAC GACCTGGTGTTGGGTCTGAACACCCCAACATCCCTGAATCTCCACCCACCTCCCAAACTCCTGCCTGCCCTCCAGACTGTCTGCCCATAC ACCTGTCTCCTTCTTCCTGCCTGCTTGTCTGTTCCTATATTAGTTTCCTATTACTGCTGTAATAAACTATCACAATCTCAGTGATTTTAA >In-frame_ENST00000337907_ENST00000310638_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(amino acids)=889AA_start in transcript=533_stop in transcript=3202 MELSEKFRRLKPRLTVYLSRRPSRERTEEGTWRIMTADKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEGGAKNYAESDHS EDEDNDNNSATAEESTKKNKKKPPKKKSRYERTDTGEITSYITEDDVVYRPGDCVYIESRRPNTPYFICSIQDFKLVHNSQACCRSPTPA LCDPPACSLPVASQPPQHLSEAGRGPVGSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVIKNRELFISDYVDTY HAAALRGKCNISHFSDIFAAREFKARVDSFFYILGYNPETRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCD LLMYLRAARSMAAFAGMCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTEDEVLQQDQELQRIQKWVE TFPSACPHWLWGGKVRVQLYDPDYMKVILGRSDPKSHGSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDILKPYVGLMADSVRVML DKWEELLGQDSPLEVFQHVSLMTLDTIMKCAFSHQGSIQVDRNSQSYIQAISDLNNLVFSRVRNAFHQNDTIYSLTSAGRWTHRACQLAH QHTDQVIQLRKAQLQKEGELEKIKRKRHLDFLDILLLAKMENGSILSDKDLRAEVDTFMFEGHDTTASGISWILYALATHPKHQERCREE IHSLLGDGASITWNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRFAPGS -------------------------------------------------------------- >In-frame_ENST00000337907_ENST00000371904_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(transcript)=3380nt_BP=1838nt AAAATCACCATCATCCTCAGGGAGCCCCCTCGCCCTCGGAAAACAAAACCAGACATGATCCTGGGCTCCTGCTTCTGAAAGATCTGCCCG ACCGAGGAGGAGGGAGCCTAGGTTCAAGTCGCAGGAAAGGTCACGGCAGGGAAGCCCCCTCAGCCCCTCCGCGTCGCCTCCCCGCGGGCC GCCCCTCTCGGCCCTGCGCCCCGCGGCCCCGCAGCCTCCGCGCGGCCTCCCGCCCCATCCCCGCCACTTTCCCCGGAGCTGGGCCGCGAA CACCTCACTATTGATGGTGTAGCGCTTTAGGGGAAGGAGGTGATTGTCTAGGAGTAACTGTATGTGCGCTCAGCACCGGGTCACAACCAC CGTGGGATCCACTTACAGAGAAGATTTGTGGAGAGCTTCAGCCTGTTTATGGTGTTACTGAGAAAGGAATTGTGGCCATTTGATATAATT CTGGATGGAAGACCTCTTATTTGTATTACATTGAATTAGAGCATTTTTGAAACGTTGGGGTTGTTGGAGTGGTTGGATTTTCCCTGGAAT TGAGTGAGAAATTCAGAAGACTGAAGCCCAGGCTTACTGTCTACCTTTCACGGAGGCCTAGCCGTGAGAGGACAGAAGAAGGCACGTGGC GAATCATGACAGCGGACAAAGACAAAGACAAAGACAAAGAGAAGGACCGGGACCGAGACCGGGACCGAGAGAGAGAGAAAAGAGACAAAG CAAGAGAGAGTGAGAATTCAAGGCCACGCCGGAGCTGTACCTTGGAAGGAGGAGCCAAAAATTATGCTGAGAGTGATCACAGTGAAGACG AGGACAATGACAACAATAGTGCCACCGCAGAGGAGTCCACGAAGAAGAATAAGAAGAAACCACCGAAAAAAAAGTCTCGTTATGAAAGGA CAGATACCGGTGAGATAACATCCTACATCACTGAAGATGATGTGGTCTACAGACCAGGAGACTGTGTGTATATCGAGAGTCGGAGGCCAA ACACACCGTATTTCATCTGTAGCATTCAAGACTTCAAACTGGTCCACAACTCCCAGGCCTGTTGCAGATCTCCAACTCCTGCTTTGTGTG ACCCCCCAGCATGCTCTCTGCCGGTGGCATCACAGCCACCACAGCATCTTTCTGAAGCCGGGAGAGGGCCTGTAGGGAGTAAGAGGGACC ATCTCCTCATGAACGTCAAATGGTACTACCGTCAATCTGAGGTTCCAGATTCTGTGTATCAGCATTTGGTTCAGGATCGACATAATGAAA ATGACTCTGGAAGAGAACTTGTCATTACAGACCCAGTTATCAAGAACCGAGAGCTCTTCATTTCTGATTACGTTGACACTTACCATGCTG CTGCCCTTAGAGGGAAGTGTAACATCTCCCATTTTTCTGACATATTTGCTGCTAGAGAGTTTAAAGCCCGAGTGGATTCATTTTTCTACA TATTAGGATATAACCCTGAGACAAGGAGGCTGAACAGTACCCAGGGGGAGATTCGTGTCGGTCCTAGTCATCAGGCCAAACTTCCAGATC TGCAACCATTTCCTTCTCCAGATGGTGATACAGTGACCCAACATGAGGAACTGGTCTGGATGCCTGGAGTTAACGACTGTGACCTCCTTA TGTACTTGAGGGCAGCAAGGAGCATGGCGGCATTTGCAGGAATGTGTGATGGAGGCTCTACAGAGGACGGCTGTGTCGCAGCCTCTCGGG ATGACACCACTCTGAATGCACTGAACACACTGCATGAAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGC CCAAGCTCATCGAGAAGTGCTGGACCGAGGACGAAGTGCTCCAACAGGACCAGGAGCTACAACGGATTCAGAAATGGGTGGAGACATTCC CAAGTGCCTGTCCTCATTGGCTATGGGGAGGCAAAGTTCGTGTCCAGCTCTATGACCCTGACTATATGAAGGTGATTCTGGGGAGATCAG ACCCGAAATCCCATGGTTCCTACAGATTCCTGGCTCCATGGATTGGGTACGGCTTGCTCCTGTTGAATGGGCAGACATGGTTCCAGCATC GACGGATGCTGACCCCAGCCTTCCACTATGACATCCTGAAGCCCTATGTGGGGCTCATGGCAGACTCTGTACGAGTGATGCTGGACAAAT GGGAAGAGCTCCTTGGCCAGGATTCCCCTCTGGAGGTCTTTCAGCACGTCTCCTTGATGACCCTGGACACCATCATGAAGTGTGCCTTCA GCCATCAGGGCAGCATCCAGGTGGACAGGAATTCTCAGTCCTACATACAGGCCATTAGTGACCTGAACAACCTGGTTTTTTCCCGTGTGA GGAATGCCTTTCACCAGAATGACACCATCTACAGCCTGACCTCTGCTGGCCGCTGGACACACCGCGCCTGCCAGCTGGCCCATCAGCACA CAGGAGACCAAGTGATCCAACTGAGGAAGGCTCAACTACAGAAGGAGGGGGAGCTGGAGAAGATCAAGAGGAAGAGGCATTTGGATTTTC TGGATATCCTCCTCTTGGCCAAAATGGAGAATGGGAGCATCTTGTCAGACAAGGACCTCCGTGCTGAGGTGGACACGTTCATGTTTGAGG GCCACGACACCACAGCCAGTGGGATCTCCTGGATCCTCTATGCTCTGGCCACACACCCCAAGCATCAGGAGAGGTGCCGGGAGGAGATCC ACAGCCTCCTGGGTGATGGAGCCTCCATCACCTGGAACCACCTGGACCAGATGCCCTACACCACCATGTGCATTAAGGAGGCACTGAGGC TCTACCCACCGGTGCCAGGCATTGGCAGAGAGCTCAGCACTCCCGTCACCTTCCCTGATGGGCGCTCCTTGCCCAAAGGTATCATGGTCC TCCTCTCCATTTATGGCCTTCACCACAACCCAAAAGTGTGGCCCAACCCAGAGGTGTTTGACCCTTTCCGTTTTGCACCGGGTTCTGCTC AACACAGCCACGCTTTCCTGCCCTTCTCAGGAGGATCAAGGAACTGCATCGGGAAACAATTTGCCATGAACGAGCTGAAGGTGGCCACGG CCCTGACCCTGCTCCGCTTTGAGCTGCTGCCTGATCCCACCAGGATCCCCATCCCCATTGCACGACTTGTGTTGAAATCCAAAAATGGAA TCCACCTGCGTCTCAGGAGGCTCCCTAACCCTTGTGAAGACAAGGACCAGCTTTGAGGGCCTCCACCTGCCGTCCTGTCTTCCTGACCCC CGCTTCTGTCCCCTTCCTGTCTGCCCATATCCTGTTTTCTGTCTGCCCATACACCTGTCTCCTTCTTCCTGCCTGCTTGTCTGTTCCTAT >In-frame_ENST00000337907_ENST00000371904_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(amino acids)=890AA_start in transcript=533_stop in transcript=3205 MELSEKFRRLKPRLTVYLSRRPSRERTEEGTWRIMTADKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEGGAKNYAESDHS EDEDNDNNSATAEESTKKNKKKPPKKKSRYERTDTGEITSYITEDDVVYRPGDCVYIESRRPNTPYFICSIQDFKLVHNSQACCRSPTPA LCDPPACSLPVASQPPQHLSEAGRGPVGSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVIKNRELFISDYVDTY HAAALRGKCNISHFSDIFAAREFKARVDSFFYILGYNPETRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCD LLMYLRAARSMAAFAGMCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTEDEVLQQDQELQRIQKWVE TFPSACPHWLWGGKVRVQLYDPDYMKVILGRSDPKSHGSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDILKPYVGLMADSVRVML DKWEELLGQDSPLEVFQHVSLMTLDTIMKCAFSHQGSIQVDRNSQSYIQAISDLNNLVFSRVRNAFHQNDTIYSLTSAGRWTHRACQLAH QHTGDQVIQLRKAQLQKEGELEKIKRKRHLDFLDILLLAKMENGSILSDKDLRAEVDTFMFEGHDTTASGISWILYALATHPKHQERCRE EIHSLLGDGASITWNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRFAPG -------------------------------------------------------------- >In-frame_ENST00000337907_ENST00000462347_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(transcript)=3387nt_BP=1838nt AAAATCACCATCATCCTCAGGGAGCCCCCTCGCCCTCGGAAAACAAAACCAGACATGATCCTGGGCTCCTGCTTCTGAAAGATCTGCCCG ACCGAGGAGGAGGGAGCCTAGGTTCAAGTCGCAGGAAAGGTCACGGCAGGGAAGCCCCCTCAGCCCCTCCGCGTCGCCTCCCCGCGGGCC GCCCCTCTCGGCCCTGCGCCCCGCGGCCCCGCAGCCTCCGCGCGGCCTCCCGCCCCATCCCCGCCACTTTCCCCGGAGCTGGGCCGCGAA CACCTCACTATTGATGGTGTAGCGCTTTAGGGGAAGGAGGTGATTGTCTAGGAGTAACTGTATGTGCGCTCAGCACCGGGTCACAACCAC CGTGGGATCCACTTACAGAGAAGATTTGTGGAGAGCTTCAGCCTGTTTATGGTGTTACTGAGAAAGGAATTGTGGCCATTTGATATAATT CTGGATGGAAGACCTCTTATTTGTATTACATTGAATTAGAGCATTTTTGAAACGTTGGGGTTGTTGGAGTGGTTGGATTTTCCCTGGAAT TGAGTGAGAAATTCAGAAGACTGAAGCCCAGGCTTACTGTCTACCTTTCACGGAGGCCTAGCCGTGAGAGGACAGAAGAAGGCACGTGGC GAATCATGACAGCGGACAAAGACAAAGACAAAGACAAAGAGAAGGACCGGGACCGAGACCGGGACCGAGAGAGAGAGAAAAGAGACAAAG CAAGAGAGAGTGAGAATTCAAGGCCACGCCGGAGCTGTACCTTGGAAGGAGGAGCCAAAAATTATGCTGAGAGTGATCACAGTGAAGACG AGGACAATGACAACAATAGTGCCACCGCAGAGGAGTCCACGAAGAAGAATAAGAAGAAACCACCGAAAAAAAAGTCTCGTTATGAAAGGA CAGATACCGGTGAGATAACATCCTACATCACTGAAGATGATGTGGTCTACAGACCAGGAGACTGTGTGTATATCGAGAGTCGGAGGCCAA ACACACCGTATTTCATCTGTAGCATTCAAGACTTCAAACTGGTCCACAACTCCCAGGCCTGTTGCAGATCTCCAACTCCTGCTTTGTGTG ACCCCCCAGCATGCTCTCTGCCGGTGGCATCACAGCCACCACAGCATCTTTCTGAAGCCGGGAGAGGGCCTGTAGGGAGTAAGAGGGACC ATCTCCTCATGAACGTCAAATGGTACTACCGTCAATCTGAGGTTCCAGATTCTGTGTATCAGCATTTGGTTCAGGATCGACATAATGAAA ATGACTCTGGAAGAGAACTTGTCATTACAGACCCAGTTATCAAGAACCGAGAGCTCTTCATTTCTGATTACGTTGACACTTACCATGCTG CTGCCCTTAGAGGGAAGTGTAACATCTCCCATTTTTCTGACATATTTGCTGCTAGAGAGTTTAAAGCCCGAGTGGATTCATTTTTCTACA TATTAGGATATAACCCTGAGACAAGGAGGCTGAACAGTACCCAGGGGGAGATTCGTGTCGGTCCTAGTCATCAGGCCAAACTTCCAGATC TGCAACCATTTCCTTCTCCAGATGGTGATACAGTGACCCAACATGAGGAACTGGTCTGGATGCCTGGAGTTAACGACTGTGACCTCCTTA TGTACTTGAGGGCAGCAAGGAGCATGGCGGCATTTGCAGGAATGTGTGATGGAGGCTCTACAGAGGACGGCTGTGTCGCAGCCTCTCGGG ATGACACCACTCTGAATGCACTGAACACACTGCATGAAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGC CCAAGCTCATCGAGAAGTGCTGGACCGAGGACGAAGTGCTCCAACAGGACCAGGAGCTACAACGGATTCAGAAATGGGTGGAGACATTCC CAAGTGCCTGTCCTCATTGGCTATGGGGAGGCAAAGTTCGTGTCCAGCTCTATGACCCTGACTATATGAAGGTGATTCTGGGGAGATCAG ACCCGAAATCCCATGGTTCCTACAGATTCCTGGCTCCATGGATTGGGTACGGCTTGCTCCTGTTGAATGGGCAGACATGGTTCCAGCATC GACGGATGCTGACCCCAGCCTTCCACTATGACATCCTGAAGCCCTATGTGGGGCTCATGGCAGACTCTGTACGAGTGATGCTGGACAAAT GGGAAGAGCTCCTTGGCCAGGATTCCCCTCTGGAGGTCTTTCAGCACGTCTCCTTGATGACCCTGGACACCATCATGAAGTGTGCCTTCA GCCATCAGGGCAGCATCCAGGTGGACAGACCAAGTGATCCAACTGAGGAAGGCTCAACTACAGAAGGAGGGGGAGCTGGAGAAGATCAAG AGGAAGAGGCATTTGGATTTTCTGGATATCCTCCTCTTGGCCAAAGGGCCCCTGGTCTGCCCAGGCCTTGCTGGTGTTCAGGATGGAATT GTTTCAGGAACCACCTGGACCAGATGCCCTACACCACCATGTGCATTAAGGAGGCACTGAGGCTCTACCCACCGGTGCCAGGCATTGGCA GAGAGCTCAGCACTCCCGTCACCTTCCCTGATGGGCGCTCCTTGCCCAAAGGTATCATGGTCCTCCTCTCCATTTATGGCCTTCACCACA ACCCAAAAGTGTGGCCCAACCCAGAGGTGTTTGACCCTTTCCGTTTTGCACCGGGTTCTGCTCAACACAGCCACGCTTTCCTGCCCTTCT CAGGAGGATCAAGGAACTGCATCGGGAAACAATTTGCCATGAACGAGCTGAAGGTGGCCACGGCCCTGACCCTGCTCCGCTTTGAGCTGC TGCCTGATCCCACCAGGATCCCCATCCCCATTGCACGACTTGTGTTGAAATCCAAAAATGGAATCCACCTGCGTCTCAGGAGGCTCCCTA ACCCTTGTGAAGACAAGGACCAGCTTTGAGGGCCTCCACCTGCCGTCCTGTCTTCCTGACCCCCGCTTCTGTCCCCTTCCTGTCTGCCCA TATCCTGTTTTCTGTCTGCCCACCTTCCCTTCTTCCCACCTGCCTGCTGTCCCCCAGTCTGCCTGCCCTTCTCTCTCTCACCTTTCTCCA GGCTCCCTACCTGCTTGTCTACCTGTCTCCTACCCACCTGTATCTCTTGTTGGGAGAAAAGCTGAGTGTTGGGAGAAGCTGAGGCCGAGC TTGCATGTCTGACATAATGTAAAAGAGTCTTGGATCATGTCCAGGATCCAGGGTCTAAAACCCCTTGTGGCCTTTGGAACACCAAGCTCT GTGCTGAAGGGTGGAAGGCTACCCTGACGCACCATAATCTAAGCCCGGGGCATAAAACCCCTCGTGGCTTGGATAGAATCCAGGGCTCGT >In-frame_ENST00000337907_ENST00000462347_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(amino acids)=791AA_start in transcript=533_stop in transcript=2908 MELSEKFRRLKPRLTVYLSRRPSRERTEEGTWRIMTADKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEGGAKNYAESDHS EDEDNDNNSATAEESTKKNKKKPPKKKSRYERTDTGEITSYITEDDVVYRPGDCVYIESRRPNTPYFICSIQDFKLVHNSQACCRSPTPA LCDPPACSLPVASQPPQHLSEAGRGPVGSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVIKNRELFISDYVDTY HAAALRGKCNISHFSDIFAAREFKARVDSFFYILGYNPETRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCD LLMYLRAARSMAAFAGMCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTEDEVLQQDQELQRIQKWVE TFPSACPHWLWGGKVRVQLYDPDYMKVILGRSDPKSHGSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDILKPYVGLMADSVRVML DKWEELLGQDSPLEVFQHVSLMTLDTIMKCAFSHQGSIQVDRPSDPTEEGSTTEGGGAGEDQEEEAFGFSGYPPLGQRAPGLPRPCWCSG WNCFRNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRFAPGSAQHSHAFL -------------------------------------------------------------- >In-frame_ENST00000337907_ENST00000371905_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(transcript)=3337nt_BP=1838nt AAAATCACCATCATCCTCAGGGAGCCCCCTCGCCCTCGGAAAACAAAACCAGACATGATCCTGGGCTCCTGCTTCTGAAAGATCTGCCCG ACCGAGGAGGAGGGAGCCTAGGTTCAAGTCGCAGGAAAGGTCACGGCAGGGAAGCCCCCTCAGCCCCTCCGCGTCGCCTCCCCGCGGGCC GCCCCTCTCGGCCCTGCGCCCCGCGGCCCCGCAGCCTCCGCGCGGCCTCCCGCCCCATCCCCGCCACTTTCCCCGGAGCTGGGCCGCGAA CACCTCACTATTGATGGTGTAGCGCTTTAGGGGAAGGAGGTGATTGTCTAGGAGTAACTGTATGTGCGCTCAGCACCGGGTCACAACCAC CGTGGGATCCACTTACAGAGAAGATTTGTGGAGAGCTTCAGCCTGTTTATGGTGTTACTGAGAAAGGAATTGTGGCCATTTGATATAATT CTGGATGGAAGACCTCTTATTTGTATTACATTGAATTAGAGCATTTTTGAAACGTTGGGGTTGTTGGAGTGGTTGGATTTTCCCTGGAAT TGAGTGAGAAATTCAGAAGACTGAAGCCCAGGCTTACTGTCTACCTTTCACGGAGGCCTAGCCGTGAGAGGACAGAAGAAGGCACGTGGC GAATCATGACAGCGGACAAAGACAAAGACAAAGACAAAGAGAAGGACCGGGACCGAGACCGGGACCGAGAGAGAGAGAAAAGAGACAAAG CAAGAGAGAGTGAGAATTCAAGGCCACGCCGGAGCTGTACCTTGGAAGGAGGAGCCAAAAATTATGCTGAGAGTGATCACAGTGAAGACG AGGACAATGACAACAATAGTGCCACCGCAGAGGAGTCCACGAAGAAGAATAAGAAGAAACCACCGAAAAAAAAGTCTCGTTATGAAAGGA CAGATACCGGTGAGATAACATCCTACATCACTGAAGATGATGTGGTCTACAGACCAGGAGACTGTGTGTATATCGAGAGTCGGAGGCCAA ACACACCGTATTTCATCTGTAGCATTCAAGACTTCAAACTGGTCCACAACTCCCAGGCCTGTTGCAGATCTCCAACTCCTGCTTTGTGTG ACCCCCCAGCATGCTCTCTGCCGGTGGCATCACAGCCACCACAGCATCTTTCTGAAGCCGGGAGAGGGCCTGTAGGGAGTAAGAGGGACC ATCTCCTCATGAACGTCAAATGGTACTACCGTCAATCTGAGGTTCCAGATTCTGTGTATCAGCATTTGGTTCAGGATCGACATAATGAAA ATGACTCTGGAAGAGAACTTGTCATTACAGACCCAGTTATCAAGAACCGAGAGCTCTTCATTTCTGATTACGTTGACACTTACCATGCTG CTGCCCTTAGAGGGAAGTGTAACATCTCCCATTTTTCTGACATATTTGCTGCTAGAGAGTTTAAAGCCCGAGTGGATTCATTTTTCTACA TATTAGGATATAACCCTGAGACAAGGAGGCTGAACAGTACCCAGGGGGAGATTCGTGTCGGTCCTAGTCATCAGGCCAAACTTCCAGATC TGCAACCATTTCCTTCTCCAGATGGTGATACAGTGACCCAACATGAGGAACTGGTCTGGATGCCTGGAGTTAACGACTGTGACCTCCTTA TGTACTTGAGGGCAGCAAGGAGCATGGCGGCATTTGCAGGAATGTGTGATGGAGGCTCTACAGAGGACGGCTGTGTCGCAGCCTCTCGGG ATGACACCACTCTGAATGCACTGAACACACTGCATGAAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGC CCAAGCTCATCGAGAAGTGCTGGACCGAGGACGAAGTGCTCCAACAGGACCAGGAGCTACAACGGATTCAGAAATGGGTGGAGACATTCC CAAGTGCCTGTCCTCATTGGCTATGGGGAGGCAAAGTTCGTGTCCAGCTCTATGACCCTGACTATATGAAGGTGATTCTGGGGAGATCAG ACCCGAAATCCCATGGTTCCTACAGATTCCTGGCTCCATGGATTGGGTACGGCTTGCTCCTGTTGAATGGGCAGACATGGTTCCAGCATC GACGGATGCTGACCCCAGCCTTCCACTATGACATCCTGAAGCCCTATGTGGGGCTCATGGCAGACTCTGTACGAGTGATGCTGGACAAAT GGGAAGAGCTCCTTGGCCAGGATTCCCCTCTGGAGGTCTTTCAGCACGTCTCCTTGATGACCCTGGACACCATCATGAAGTGTGCCTTCA GCCATCAGGGCAGCATCCAGGTGGACAGGAATTCTCAGTCCTACATACAGGCCATTAGTGACCTGAACAACCTGGTTTTTTCCCGTGTGA GGAATGCCTTTCACCAGAATGACACCATCTACAGCCTGACCTCTGCTGGCCGCTGGACACACCGCGCCTGCCAGCTGGCCCATCAGCACA CAGACCAAGTGATCCAACTGAGGAAGGCTCAACTACAGAAGGAGGGGGAGCTGGAGAAGATCAAGAGGAAGAGGCATTTGGATTTTCTGG ATATCCTCCTCTTGGCCAAAATGGAGAATGGGAGCATCTTGTCAGACAAGGACCTCCGTGCTGAGGTGGACACGTTCATGTTTGAGGGCC ACGACACCACAGCCAGTGGGATCTCCTGGATCCTCTATGCTCTGGCCACACACCCCAAGCATCAGGAGAGGTGCCGGGAGGAGATCCACA GCCTCCTGGGTGATGGAGCCTCCATCACCTGGAACCACCTGGACCAGATGCCCTACACCACCATGTGCATTAAGGAGGCACTGAGGCTCT ACCCACCGGTGCCAGGCATTGGCAGAGAGCTCAGCACTCCCGTCACCTTCCCTGATGGGCGCTCCTTGCCCAAAGGTATCATGGTCCTCC TCTCCATTTATGGCCTTCACCACAACCCAAAAGTGTGGCCCAACCCAGAGGTGTTTGACCCTTTCCGTTTTGCACCGGGTTCTGCTCAAC ACAGCCACGCTTTCCTGCCCTTCTCAGGAGGATCAAGGTGAGACGTCCTGTGTGGTAATTCGAATAGAGGAATGAGGGAAGTCTCTGGTC AACCCTCTGATCTTTGTGAGCCTGATGTTCATATGTGGCATCTTCAGGTGTGCTCTTAAATGTTGGTATTTGTGGGAAAGTCAGGCACCT GGTGTGGGCGTCTCTGTGTACAAAAGGAAGGTGGCATTCAGAGCACCCCATGGAGACTTTGCTCCCTCTGCTTCTTCAAATGGGCAGCCT GAATTCACTGTCAGTGCATGTTCCAAACTTCAGTATATTCATGTATTTTCCTCACTTTAAGGATATGAATTCTCAAAATTAGATATTCTC >In-frame_ENST00000337907_ENST00000371905_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(amino acids)=825AA_start in transcript=533_stop in transcript=3010 MELSEKFRRLKPRLTVYLSRRPSRERTEEGTWRIMTADKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEGGAKNYAESDHS EDEDNDNNSATAEESTKKNKKKPPKKKSRYERTDTGEITSYITEDDVVYRPGDCVYIESRRPNTPYFICSIQDFKLVHNSQACCRSPTPA LCDPPACSLPVASQPPQHLSEAGRGPVGSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVIKNRELFISDYVDTY HAAALRGKCNISHFSDIFAAREFKARVDSFFYILGYNPETRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCD LLMYLRAARSMAAFAGMCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTEDEVLQQDQELQRIQKWVE TFPSACPHWLWGGKVRVQLYDPDYMKVILGRSDPKSHGSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDILKPYVGLMADSVRVML DKWEELLGQDSPLEVFQHVSLMTLDTIMKCAFSHQGSIQVDRNSQSYIQAISDLNNLVFSRVRNAFHQNDTIYSLTSAGRWTHRACQLAH QHTDQVIQLRKAQLQKEGELEKIKRKRHLDFLDILLLAKMENGSILSDKDLRAEVDTFMFEGHDTTASGISWILYALATHPKHQERCREE IHSLLGDGASITWNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRFAPGS -------------------------------------------------------------- >In-frame_ENST00000377464_ENST00000310638_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(transcript)=2857nt_BP=554nt GGCTTAGGTCATAGCACAAGCTCAGTGAAAGCTCTATGAGGTCTCTGAGACTGCATGTGCCTCCATTTTGAGTTGTTAGTGTAGAAAAGG GCAGAGTTTTAGCAGAAAGTAAAGGTTCAGGAATCCAGCTAGACTCACCAGAGCCCGTGTTAGTCATGGATGATCCATTCAGCCCCTGCA GGAGGCTGAACAGTACCCAGGGGGAGATTCGTGTCGGTCCTAGTCATCAGGCCAAACTTCCAGATCTGCAACCATTTCCTTCTCCAGATG GTGATACAGTGACCCAACATGAGGAACTGGTCTGGATGCCTGGAGTTAACGACTGTGACCTCCTTATGTACTTGAGGGCAGCAAGGAGCA TGGCGGCATTTGCAGGAATGTGTGATGGAGGCTCTACAGAGGACGGCTGTGTCGCAGCCTCTCGGGATGACACCACTCTGAATGCACTGA ACACACTGCATGAAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGA CCGAGGACGAAGTGCTCCAACAGGACCAGGAGCTACAACGGATTCAGAAATGGGTGGAGACATTCCCAAGTGCCTGTCCTCATTGGCTAT GGGGAGGCAAAGTTCGTGTCCAGCTCTATGACCCTGACTATATGAAGGTGATTCTGGGGAGATCAGACCCGAAATCCCATGGTTCCTACA GATTCCTGGCTCCATGGATTGGGTACGGCTTGCTCCTGTTGAATGGGCAGACATGGTTCCAGCATCGACGGATGCTGACCCCAGCCTTCC ACTATGACATCCTGAAGCCCTATGTGGGGCTCATGGCAGACTCTGTACGAGTGATGCTGGACAAATGGGAAGAGCTCCTTGGCCAGGATT CCCCTCTGGAGGTCTTTCAGCACGTCTCCTTGATGACCCTGGACACCATCATGAAGTGTGCCTTCAGCCATCAGGGCAGCATCCAGGTGG ACAGGAATTCTCAGTCCTACATACAGGCCATTAGTGACCTGAACAACCTGGTTTTTTCCCGTGTGAGGAATGCCTTTCACCAGAATGACA CCATCTACAGCCTGACCTCTGCTGGCCGCTGGACACACCGCGCCTGCCAGCTGGCCCATCAGCACACAGACCAAGTGATCCAACTGAGGA AGGCTCAACTACAGAAGGAGGGGGAGCTGGAGAAGATCAAGAGGAAGAGGCATTTGGATTTTCTGGATATCCTCCTCTTGGCCAAAATGG AGAATGGGAGCATCTTGTCAGACAAGGACCTCCGTGCTGAGGTGGACACGTTCATGTTTGAGGGCCACGACACCACAGCCAGTGGGATCT CCTGGATCCTCTATGCTCTGGCCACACACCCCAAGCATCAGGAGAGGTGCCGGGAGGAGATCCACAGCCTCCTGGGTGATGGAGCCTCCA TCACCTGGAACCACCTGGACCAGATGCCCTACACCACCATGTGCATTAAGGAGGCACTGAGGCTCTACCCACCGGTGCCAGGCATTGGCA GAGAGCTCAGCACTCCCGTCACCTTCCCTGATGGGCGCTCCTTGCCCAAAGGTATCATGGTCCTCCTCTCCATTTATGGCCTTCACCACA ACCCAAAAGTGTGGCCCAACCCAGAGGTGTTTGACCCTTTCCGTTTTGCACCGGGTTCTGCTCAACACAGCCACGCTTTCCTGCCCTTCT CAGGAGGATCAAGGAACTGCATCGGGAAACAATTTGCCATGAACGAGCTGAAGGTGGCCACGGCCCTGACCCTGCTCCGCTTTGAGCTGC TGCCTGATCCCACCAGGATCCCCATCCCCATTGCACGACTTGTGTTGAAATCCAAAAATGGAATCCACCTGCGTCTCAGGAGGCTCCCTA ACCCTTGTGAAGACAAGGACCAGCTTTGAGGGCCTCCACCTGCCGTCCTGTCTTCCTGACCCCCGCTTCTGTCCCCTTCCTGTCTGCCCA TATCCTGTTTTCTGTCTGCCCACCTTCCCTTCTTCCCACCTGCCTGCTGTCCCCCAGTCTGCCTGCCCTTCTCTCTCTCACCTTTCTCCA GGCTCCCTACCTGCTTGTCTACCTGTCTCCTACCCACCTGTATCTCTTGTTGGGAGAAAAGCTGAGTGTTGGGAGAAGCTGAGGCCGAGC TTGCATGTCTGACATAATGTAAAAGAGTCTTGGATCATGTCCAGGATCCAGGGTCTAAAACCCCTTGTGGCCTTTGGAACACCAAGCTCT GTGCTGAAGGGTGGAAGGCTACCCTGACGCACCATAATCTAAGCCCGGGGCATAAAACCCCTCGTGGCTTGGATAGAATCCAGGGCTCGT GGCTCTGGAATGTGTCTGAACTTGCTGCCTCCTCGCTCCTTGCTCTCCCAGGATCAATTGTATCTTGAGTTAAAAGAACCTGCTCTCCAT TATCTCAAGTAGCAGAGCAGATGCTAAACCGTCACAGCTGTAAATCATGTGCTTAATGCAACATGCCCTTTCGACCCCCACATTCTCACC ACCTGTTTCTTTGTTTGATCACCAATAAATAATCTGCACTTCCAGAGCTCGGGGCCTTCACAGCCTCCATCCTTAGCTTTGGCGCCCTGG ACCCACTTTCTCTCTCAAACTGTCTTTTCTCACTGCTTTGACTCTGCCGGACTTTGTCACCCCCACGACCTGGTGTTGGGTCTGAACACC CCAACATCCCTGAATCTCCACCCACCTCCCAAACTCCTGCCTGCCCTCCAGACTGTCTGCCCATACACCTGTCTCCTTCTTCCTGCCTGC >In-frame_ENST00000377464_ENST00000310638_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(amino acids)=587AA_start in transcript=155_stop in transcript=1918 MDDPFSPCRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMYLRAARSMAAFAGMCDGGSTEDGCVAASR DDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTEDEVLQQDQELQRIQKWVETFPSACPHWLWGGKVRVQLYDPDYMKVILGRS DPKSHGSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDILKPYVGLMADSVRVMLDKWEELLGQDSPLEVFQHVSLMTLDTIMKCAF SHQGSIQVDRNSQSYIQAISDLNNLVFSRVRNAFHQNDTIYSLTSAGRWTHRACQLAHQHTDQVIQLRKAQLQKEGELEKIKRKRHLDFL DILLLAKMENGSILSDKDLRAEVDTFMFEGHDTTASGISWILYALATHPKHQERCREEIHSLLGDGASITWNHLDQMPYTTMCIKEALRL YPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRFAPGSAQHSHAFLPFSGGSRNCIGKQFAMNELKVATA -------------------------------------------------------------- >In-frame_ENST00000377464_ENST00000371904_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(transcript)=2096nt_BP=554nt GGCTTAGGTCATAGCACAAGCTCAGTGAAAGCTCTATGAGGTCTCTGAGACTGCATGTGCCTCCATTTTGAGTTGTTAGTGTAGAAAAGG GCAGAGTTTTAGCAGAAAGTAAAGGTTCAGGAATCCAGCTAGACTCACCAGAGCCCGTGTTAGTCATGGATGATCCATTCAGCCCCTGCA GGAGGCTGAACAGTACCCAGGGGGAGATTCGTGTCGGTCCTAGTCATCAGGCCAAACTTCCAGATCTGCAACCATTTCCTTCTCCAGATG GTGATACAGTGACCCAACATGAGGAACTGGTCTGGATGCCTGGAGTTAACGACTGTGACCTCCTTATGTACTTGAGGGCAGCAAGGAGCA TGGCGGCATTTGCAGGAATGTGTGATGGAGGCTCTACAGAGGACGGCTGTGTCGCAGCCTCTCGGGATGACACCACTCTGAATGCACTGA ACACACTGCATGAAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGA CCGAGGACGAAGTGCTCCAACAGGACCAGGAGCTACAACGGATTCAGAAATGGGTGGAGACATTCCCAAGTGCCTGTCCTCATTGGCTAT GGGGAGGCAAAGTTCGTGTCCAGCTCTATGACCCTGACTATATGAAGGTGATTCTGGGGAGATCAGACCCGAAATCCCATGGTTCCTACA GATTCCTGGCTCCATGGATTGGGTACGGCTTGCTCCTGTTGAATGGGCAGACATGGTTCCAGCATCGACGGATGCTGACCCCAGCCTTCC ACTATGACATCCTGAAGCCCTATGTGGGGCTCATGGCAGACTCTGTACGAGTGATGCTGGACAAATGGGAAGAGCTCCTTGGCCAGGATT CCCCTCTGGAGGTCTTTCAGCACGTCTCCTTGATGACCCTGGACACCATCATGAAGTGTGCCTTCAGCCATCAGGGCAGCATCCAGGTGG ACAGGAATTCTCAGTCCTACATACAGGCCATTAGTGACCTGAACAACCTGGTTTTTTCCCGTGTGAGGAATGCCTTTCACCAGAATGACA CCATCTACAGCCTGACCTCTGCTGGCCGCTGGACACACCGCGCCTGCCAGCTGGCCCATCAGCACACAGGAGACCAAGTGATCCAACTGA GGAAGGCTCAACTACAGAAGGAGGGGGAGCTGGAGAAGATCAAGAGGAAGAGGCATTTGGATTTTCTGGATATCCTCCTCTTGGCCAAAA TGGAGAATGGGAGCATCTTGTCAGACAAGGACCTCCGTGCTGAGGTGGACACGTTCATGTTTGAGGGCCACGACACCACAGCCAGTGGGA TCTCCTGGATCCTCTATGCTCTGGCCACACACCCCAAGCATCAGGAGAGGTGCCGGGAGGAGATCCACAGCCTCCTGGGTGATGGAGCCT CCATCACCTGGAACCACCTGGACCAGATGCCCTACACCACCATGTGCATTAAGGAGGCACTGAGGCTCTACCCACCGGTGCCAGGCATTG GCAGAGAGCTCAGCACTCCCGTCACCTTCCCTGATGGGCGCTCCTTGCCCAAAGGTATCATGGTCCTCCTCTCCATTTATGGCCTTCACC ACAACCCAAAAGTGTGGCCCAACCCAGAGGTGTTTGACCCTTTCCGTTTTGCACCGGGTTCTGCTCAACACAGCCACGCTTTCCTGCCCT TCTCAGGAGGATCAAGGAACTGCATCGGGAAACAATTTGCCATGAACGAGCTGAAGGTGGCCACGGCCCTGACCCTGCTCCGCTTTGAGC TGCTGCCTGATCCCACCAGGATCCCCATCCCCATTGCACGACTTGTGTTGAAATCCAAAAATGGAATCCACCTGCGTCTCAGGAGGCTCC CTAACCCTTGTGAAGACAAGGACCAGCTTTGAGGGCCTCCACCTGCCGTCCTGTCTTCCTGACCCCCGCTTCTGTCCCCTTCCTGTCTGC CCATATCCTGTTTTCTGTCTGCCCATACACCTGTCTCCTTCTTCCTGCCTGCTTGTCTGTTCCTATATTAGTTTCCTATTACTGCTGTAA >In-frame_ENST00000377464_ENST00000371904_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(amino acids)=588AA_start in transcript=155_stop in transcript=1921 MDDPFSPCRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMYLRAARSMAAFAGMCDGGSTEDGCVAASR DDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTEDEVLQQDQELQRIQKWVETFPSACPHWLWGGKVRVQLYDPDYMKVILGRS DPKSHGSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDILKPYVGLMADSVRVMLDKWEELLGQDSPLEVFQHVSLMTLDTIMKCAF SHQGSIQVDRNSQSYIQAISDLNNLVFSRVRNAFHQNDTIYSLTSAGRWTHRACQLAHQHTGDQVIQLRKAQLQKEGELEKIKRKRHLDF LDILLLAKMENGSILSDKDLRAEVDTFMFEGHDTTASGISWILYALATHPKHQERCREEIHSLLGDGASITWNHLDQMPYTTMCIKEALR LYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRFAPGSAQHSHAFLPFSGGSRNCIGKQFAMNELKVAT -------------------------------------------------------------- >In-frame_ENST00000377464_ENST00000462347_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(transcript)=2103nt_BP=554nt GGCTTAGGTCATAGCACAAGCTCAGTGAAAGCTCTATGAGGTCTCTGAGACTGCATGTGCCTCCATTTTGAGTTGTTAGTGTAGAAAAGG GCAGAGTTTTAGCAGAAAGTAAAGGTTCAGGAATCCAGCTAGACTCACCAGAGCCCGTGTTAGTCATGGATGATCCATTCAGCCCCTGCA GGAGGCTGAACAGTACCCAGGGGGAGATTCGTGTCGGTCCTAGTCATCAGGCCAAACTTCCAGATCTGCAACCATTTCCTTCTCCAGATG GTGATACAGTGACCCAACATGAGGAACTGGTCTGGATGCCTGGAGTTAACGACTGTGACCTCCTTATGTACTTGAGGGCAGCAAGGAGCA TGGCGGCATTTGCAGGAATGTGTGATGGAGGCTCTACAGAGGACGGCTGTGTCGCAGCCTCTCGGGATGACACCACTCTGAATGCACTGA ACACACTGCATGAAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGA CCGAGGACGAAGTGCTCCAACAGGACCAGGAGCTACAACGGATTCAGAAATGGGTGGAGACATTCCCAAGTGCCTGTCCTCATTGGCTAT GGGGAGGCAAAGTTCGTGTCCAGCTCTATGACCCTGACTATATGAAGGTGATTCTGGGGAGATCAGACCCGAAATCCCATGGTTCCTACA GATTCCTGGCTCCATGGATTGGGTACGGCTTGCTCCTGTTGAATGGGCAGACATGGTTCCAGCATCGACGGATGCTGACCCCAGCCTTCC ACTATGACATCCTGAAGCCCTATGTGGGGCTCATGGCAGACTCTGTACGAGTGATGCTGGACAAATGGGAAGAGCTCCTTGGCCAGGATT CCCCTCTGGAGGTCTTTCAGCACGTCTCCTTGATGACCCTGGACACCATCATGAAGTGTGCCTTCAGCCATCAGGGCAGCATCCAGGTGG ACAGACCAAGTGATCCAACTGAGGAAGGCTCAACTACAGAAGGAGGGGGAGCTGGAGAAGATCAAGAGGAAGAGGCATTTGGATTTTCTG GATATCCTCCTCTTGGCCAAAGGGCCCCTGGTCTGCCCAGGCCTTGCTGGTGTTCAGGATGGAATTGTTTCAGGAACCACCTGGACCAGA TGCCCTACACCACCATGTGCATTAAGGAGGCACTGAGGCTCTACCCACCGGTGCCAGGCATTGGCAGAGAGCTCAGCACTCCCGTCACCT TCCCTGATGGGCGCTCCTTGCCCAAAGGTATCATGGTCCTCCTCTCCATTTATGGCCTTCACCACAACCCAAAAGTGTGGCCCAACCCAG AGGTGTTTGACCCTTTCCGTTTTGCACCGGGTTCTGCTCAACACAGCCACGCTTTCCTGCCCTTCTCAGGAGGATCAAGGAACTGCATCG GGAAACAATTTGCCATGAACGAGCTGAAGGTGGCCACGGCCCTGACCCTGCTCCGCTTTGAGCTGCTGCCTGATCCCACCAGGATCCCCA TCCCCATTGCACGACTTGTGTTGAAATCCAAAAATGGAATCCACCTGCGTCTCAGGAGGCTCCCTAACCCTTGTGAAGACAAGGACCAGC TTTGAGGGCCTCCACCTGCCGTCCTGTCTTCCTGACCCCCGCTTCTGTCCCCTTCCTGTCTGCCCATATCCTGTTTTCTGTCTGCCCACC TTCCCTTCTTCCCACCTGCCTGCTGTCCCCCAGTCTGCCTGCCCTTCTCTCTCTCACCTTTCTCCAGGCTCCCTACCTGCTTGTCTACCT GTCTCCTACCCACCTGTATCTCTTGTTGGGAGAAAAGCTGAGTGTTGGGAGAAGCTGAGGCCGAGCTTGCATGTCTGACATAATGTAAAA GAGTCTTGGATCATGTCCAGGATCCAGGGTCTAAAACCCCTTGTGGCCTTTGGAACACCAAGCTCTGTGCTGAAGGGTGGAAGGCTACCC TGACGCACCATAATCTAAGCCCGGGGCATAAAACCCCTCGTGGCTTGGATAGAATCCAGGGCTCGTGGCTCTGGAATGTGTCTGAACTTG >In-frame_ENST00000377464_ENST00000462347_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(amino acids)=489AA_start in transcript=155_stop in transcript=1624 MDDPFSPCRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMYLRAARSMAAFAGMCDGGSTEDGCVAASR DDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTEDEVLQQDQELQRIQKWVETFPSACPHWLWGGKVRVQLYDPDYMKVILGRS DPKSHGSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDILKPYVGLMADSVRVMLDKWEELLGQDSPLEVFQHVSLMTLDTIMKCAF SHQGSIQVDRPSDPTEEGSTTEGGGAGEDQEEEAFGFSGYPPLGQRAPGLPRPCWCSGWNCFRNHLDQMPYTTMCIKEALRLYPPVPGIG RELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRFAPGSAQHSHAFLPFSGGSRNCIGKQFAMNELKVATALTLLRFEL -------------------------------------------------------------- >In-frame_ENST00000377464_ENST00000371905_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(transcript)=2053nt_BP=554nt GGCTTAGGTCATAGCACAAGCTCAGTGAAAGCTCTATGAGGTCTCTGAGACTGCATGTGCCTCCATTTTGAGTTGTTAGTGTAGAAAAGG GCAGAGTTTTAGCAGAAAGTAAAGGTTCAGGAATCCAGCTAGACTCACCAGAGCCCGTGTTAGTCATGGATGATCCATTCAGCCCCTGCA GGAGGCTGAACAGTACCCAGGGGGAGATTCGTGTCGGTCCTAGTCATCAGGCCAAACTTCCAGATCTGCAACCATTTCCTTCTCCAGATG GTGATACAGTGACCCAACATGAGGAACTGGTCTGGATGCCTGGAGTTAACGACTGTGACCTCCTTATGTACTTGAGGGCAGCAAGGAGCA TGGCGGCATTTGCAGGAATGTGTGATGGAGGCTCTACAGAGGACGGCTGTGTCGCAGCCTCTCGGGATGACACCACTCTGAATGCACTGA ACACACTGCATGAAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGA CCGAGGACGAAGTGCTCCAACAGGACCAGGAGCTACAACGGATTCAGAAATGGGTGGAGACATTCCCAAGTGCCTGTCCTCATTGGCTAT GGGGAGGCAAAGTTCGTGTCCAGCTCTATGACCCTGACTATATGAAGGTGATTCTGGGGAGATCAGACCCGAAATCCCATGGTTCCTACA GATTCCTGGCTCCATGGATTGGGTACGGCTTGCTCCTGTTGAATGGGCAGACATGGTTCCAGCATCGACGGATGCTGACCCCAGCCTTCC ACTATGACATCCTGAAGCCCTATGTGGGGCTCATGGCAGACTCTGTACGAGTGATGCTGGACAAATGGGAAGAGCTCCTTGGCCAGGATT CCCCTCTGGAGGTCTTTCAGCACGTCTCCTTGATGACCCTGGACACCATCATGAAGTGTGCCTTCAGCCATCAGGGCAGCATCCAGGTGG ACAGGAATTCTCAGTCCTACATACAGGCCATTAGTGACCTGAACAACCTGGTTTTTTCCCGTGTGAGGAATGCCTTTCACCAGAATGACA CCATCTACAGCCTGACCTCTGCTGGCCGCTGGACACACCGCGCCTGCCAGCTGGCCCATCAGCACACAGACCAAGTGATCCAACTGAGGA AGGCTCAACTACAGAAGGAGGGGGAGCTGGAGAAGATCAAGAGGAAGAGGCATTTGGATTTTCTGGATATCCTCCTCTTGGCCAAAATGG AGAATGGGAGCATCTTGTCAGACAAGGACCTCCGTGCTGAGGTGGACACGTTCATGTTTGAGGGCCACGACACCACAGCCAGTGGGATCT CCTGGATCCTCTATGCTCTGGCCACACACCCCAAGCATCAGGAGAGGTGCCGGGAGGAGATCCACAGCCTCCTGGGTGATGGAGCCTCCA TCACCTGGAACCACCTGGACCAGATGCCCTACACCACCATGTGCATTAAGGAGGCACTGAGGCTCTACCCACCGGTGCCAGGCATTGGCA GAGAGCTCAGCACTCCCGTCACCTTCCCTGATGGGCGCTCCTTGCCCAAAGGTATCATGGTCCTCCTCTCCATTTATGGCCTTCACCACA ACCCAAAAGTGTGGCCCAACCCAGAGGTGTTTGACCCTTTCCGTTTTGCACCGGGTTCTGCTCAACACAGCCACGCTTTCCTGCCCTTCT CAGGAGGATCAAGGTGAGACGTCCTGTGTGGTAATTCGAATAGAGGAATGAGGGAAGTCTCTGGTCAACCCTCTGATCTTTGTGAGCCTG ATGTTCATATGTGGCATCTTCAGGTGTGCTCTTAAATGTTGGTATTTGTGGGAAAGTCAGGCACCTGGTGTGGGCGTCTCTGTGTACAAA AGGAAGGTGGCATTCAGAGCACCCCATGGAGACTTTGCTCCCTCTGCTTCTTCAAATGGGCAGCCTGAATTCACTGTCAGTGCATGTTCC >In-frame_ENST00000377464_ENST00000371905_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(amino acids)=523AA_start in transcript=155_stop in transcript=1726 MDDPFSPCRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMYLRAARSMAAFAGMCDGGSTEDGCVAASR DDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTEDEVLQQDQELQRIQKWVETFPSACPHWLWGGKVRVQLYDPDYMKVILGRS DPKSHGSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDILKPYVGLMADSVRVMLDKWEELLGQDSPLEVFQHVSLMTLDTIMKCAF SHQGSIQVDRNSQSYIQAISDLNNLVFSRVRNAFHQNDTIYSLTSAGRWTHRACQLAHQHTDQVIQLRKAQLQKEGELEKIKRKRHLDFL DILLLAKMENGSILSDKDLRAEVDTFMFEGHDTTASGISWILYALATHPKHQERCREEIHSLLGDGASITWNHLDQMPYTTMCIKEALRL -------------------------------------------------------------- >In-frame_ENST00000400907_ENST00000310638_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(transcript)=3580nt_BP=1277nt TGAAGCCCAGGCTTACTGTCTACCTTTCACGGAGGCCTAGCCGTGAGAGGACAGAAGAAGGCACGTGGCGAATCATGACAGCGGACAAAG ACAAAGACAAAGACAAAGAGAAGGACCGGGACCGAGACCGGGACCGAGAGAGAGAGAAAAGAGACAAAGCAAGAGAGAGTGAGAATTCAA GGCCACGCCGGAGCTGTACCTTGGAAGGAGGAGCCAAAAATTATGCTGAGAGTGATCACAGTGAAGACGAGGACAATGACAACAATAGTG CCACCGCAGAGGAGTCCACGAAGAAGAATAAGAAGAAACCACCGAAAAAAAAGTCTCGTTATGAAAGGACAGATACCGGTGAGATAACAT CCTACATCACTGAAGATGATGTGGTCTACAGACCAGGAGACTGTGTGTATATCGAGAGTCGGAGGCCAAACACACCGTATTTCATCTGTA GCATTCAAGACTTCAAACTGGTCCACAACTCCCAGGCCTGTTGCAGATCTCCAACTCCTGCTTTGTGTGACCCCCCAGCATGCTCTCTGC CGGTGGCATCACAGCCACCACAGCATCTTTCTGAAGCCGGGAGAGGGCCTGTAGGGAGTAAGAGGGACCATCTCCTCATGAACGTCAAAT GGTACTACCGTCAATCTGAGGTTCCAGATTCTGTGTATCAGCATTTGGTTCAGGATCGACATAATGAAAATGACTCTGGAAGAGAACTTG TCATTACAGACCCAGTTATCAAGAACCGAGAGCTCTTCATTTCTGATTACGTTGACACTTACCATGCTGCTGCCCTTAGAGGGAAGTGTA ACATCTCCCATTTTTCTGACATATTTGCTGCTAGAGAGTTTAAAGCCCGAGTGGATTCATTTTTCTACATATTAGGATATAACCCTGAGA CAAGGAGGCTGAACAGTACCCAGGGGGAGATTCGTGTCGGTCCTAGTCATCAGGCCAAACTTCCAGATCTGCAACCATTTCCTTCTCCAG ATGGTGATACAGTGACCCAACATGAGGAACTGGTCTGGATGCCTGGAGTTAACGACTGTGACCTCCTTATGTACTTGAGGGCAGCAAGGA GCATGGCGGCATTTGCAGGAATGTGTGATGGAGGCTCTACAGAGGACGGCTGTGTCGCAGCCTCTCGGGATGACACCACTCTGAATGCAC TGAACACACTGCATGAAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCT GGACCGAGGACGAAGTGCTCCAACAGGACCAGGAGCTACAACGGATTCAGAAATGGGTGGAGACATTCCCAAGTGCCTGTCCTCATTGGC TATGGGGAGGCAAAGTTCGTGTCCAGCTCTATGACCCTGACTATATGAAGGTGATTCTGGGGAGATCAGACCCGAAATCCCATGGTTCCT ACAGATTCCTGGCTCCATGGATTGGGTACGGCTTGCTCCTGTTGAATGGGCAGACATGGTTCCAGCATCGACGGATGCTGACCCCAGCCT TCCACTATGACATCCTGAAGCCCTATGTGGGGCTCATGGCAGACTCTGTACGAGTGATGCTGGACAAATGGGAAGAGCTCCTTGGCCAGG ATTCCCCTCTGGAGGTCTTTCAGCACGTCTCCTTGATGACCCTGGACACCATCATGAAGTGTGCCTTCAGCCATCAGGGCAGCATCCAGG TGGACAGGAATTCTCAGTCCTACATACAGGCCATTAGTGACCTGAACAACCTGGTTTTTTCCCGTGTGAGGAATGCCTTTCACCAGAATG ACACCATCTACAGCCTGACCTCTGCTGGCCGCTGGACACACCGCGCCTGCCAGCTGGCCCATCAGCACACAGACCAAGTGATCCAACTGA GGAAGGCTCAACTACAGAAGGAGGGGGAGCTGGAGAAGATCAAGAGGAAGAGGCATTTGGATTTTCTGGATATCCTCCTCTTGGCCAAAA TGGAGAATGGGAGCATCTTGTCAGACAAGGACCTCCGTGCTGAGGTGGACACGTTCATGTTTGAGGGCCACGACACCACAGCCAGTGGGA TCTCCTGGATCCTCTATGCTCTGGCCACACACCCCAAGCATCAGGAGAGGTGCCGGGAGGAGATCCACAGCCTCCTGGGTGATGGAGCCT CCATCACCTGGAACCACCTGGACCAGATGCCCTACACCACCATGTGCATTAAGGAGGCACTGAGGCTCTACCCACCGGTGCCAGGCATTG GCAGAGAGCTCAGCACTCCCGTCACCTTCCCTGATGGGCGCTCCTTGCCCAAAGGTATCATGGTCCTCCTCTCCATTTATGGCCTTCACC ACAACCCAAAAGTGTGGCCCAACCCAGAGGTGTTTGACCCTTTCCGTTTTGCACCGGGTTCTGCTCAACACAGCCACGCTTTCCTGCCCT TCTCAGGAGGATCAAGGAACTGCATCGGGAAACAATTTGCCATGAACGAGCTGAAGGTGGCCACGGCCCTGACCCTGCTCCGCTTTGAGC TGCTGCCTGATCCCACCAGGATCCCCATCCCCATTGCACGACTTGTGTTGAAATCCAAAAATGGAATCCACCTGCGTCTCAGGAGGCTCC CTAACCCTTGTGAAGACAAGGACCAGCTTTGAGGGCCTCCACCTGCCGTCCTGTCTTCCTGACCCCCGCTTCTGTCCCCTTCCTGTCTGC CCATATCCTGTTTTCTGTCTGCCCACCTTCCCTTCTTCCCACCTGCCTGCTGTCCCCCAGTCTGCCTGCCCTTCTCTCTCTCACCTTTCT CCAGGCTCCCTACCTGCTTGTCTACCTGTCTCCTACCCACCTGTATCTCTTGTTGGGAGAAAAGCTGAGTGTTGGGAGAAGCTGAGGCCG AGCTTGCATGTCTGACATAATGTAAAAGAGTCTTGGATCATGTCCAGGATCCAGGGTCTAAAACCCCTTGTGGCCTTTGGAACACCAAGC TCTGTGCTGAAGGGTGGAAGGCTACCCTGACGCACCATAATCTAAGCCCGGGGCATAAAACCCCTCGTGGCTTGGATAGAATCCAGGGCT CGTGGCTCTGGAATGTGTCTGAACTTGCTGCCTCCTCGCTCCTTGCTCTCCCAGGATCAATTGTATCTTGAGTTAAAAGAACCTGCTCTC CATTATCTCAAGTAGCAGAGCAGATGCTAAACCGTCACAGCTGTAAATCATGTGCTTAATGCAACATGCCCTTTCGACCCCCACATTCTC ACCACCTGTTTCTTTGTTTGATCACCAATAAATAATCTGCACTTCCAGAGCTCGGGGCCTTCACAGCCTCCATCCTTAGCTTTGGCGCCC TGGACCCACTTTCTCTCTCAAACTGTCTTTTCTCACTGCTTTGACTCTGCCGGACTTTGTCACCCCCACGACCTGGTGTTGGGTCTGAAC ACCCCAACATCCCTGAATCTCCACCCACCTCCCAAACTCCTGCCTGCCCTCCAGACTGTCTGCCCATACACCTGTCTCCTTCTTCCTGCC >In-frame_ENST00000400907_ENST00000310638_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(amino acids)=855AA_start in transcript=74_stop in transcript=2641 MTADKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEGGAKNYAESDHSEDEDNDNNSATAEESTKKNKKKPPKKKSRYERTD TGEITSYITEDDVVYRPGDCVYIESRRPNTPYFICSIQDFKLVHNSQACCRSPTPALCDPPACSLPVASQPPQHLSEAGRGPVGSKRDHL LMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVIKNRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARVDSFFYIL GYNPETRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMYLRAARSMAAFAGMCDGGSTEDGCVAASRDD TTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTEDEVLQQDQELQRIQKWVETFPSACPHWLWGGKVRVQLYDPDYMKVILGRSDP KSHGSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDILKPYVGLMADSVRVMLDKWEELLGQDSPLEVFQHVSLMTLDTIMKCAFSH QGSIQVDRNSQSYIQAISDLNNLVFSRVRNAFHQNDTIYSLTSAGRWTHRACQLAHQHTDQVIQLRKAQLQKEGELEKIKRKRHLDFLDI LLLAKMENGSILSDKDLRAEVDTFMFEGHDTTASGISWILYALATHPKHQERCREEIHSLLGDGASITWNHLDQMPYTTMCIKEALRLYP PVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRFAPGSAQHSHAFLPFSGGSRNCIGKQFAMNELKVATALT -------------------------------------------------------------- >In-frame_ENST00000400907_ENST00000371904_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(transcript)=2819nt_BP=1277nt TGAAGCCCAGGCTTACTGTCTACCTTTCACGGAGGCCTAGCCGTGAGAGGACAGAAGAAGGCACGTGGCGAATCATGACAGCGGACAAAG ACAAAGACAAAGACAAAGAGAAGGACCGGGACCGAGACCGGGACCGAGAGAGAGAGAAAAGAGACAAAGCAAGAGAGAGTGAGAATTCAA GGCCACGCCGGAGCTGTACCTTGGAAGGAGGAGCCAAAAATTATGCTGAGAGTGATCACAGTGAAGACGAGGACAATGACAACAATAGTG CCACCGCAGAGGAGTCCACGAAGAAGAATAAGAAGAAACCACCGAAAAAAAAGTCTCGTTATGAAAGGACAGATACCGGTGAGATAACAT CCTACATCACTGAAGATGATGTGGTCTACAGACCAGGAGACTGTGTGTATATCGAGAGTCGGAGGCCAAACACACCGTATTTCATCTGTA GCATTCAAGACTTCAAACTGGTCCACAACTCCCAGGCCTGTTGCAGATCTCCAACTCCTGCTTTGTGTGACCCCCCAGCATGCTCTCTGC CGGTGGCATCACAGCCACCACAGCATCTTTCTGAAGCCGGGAGAGGGCCTGTAGGGAGTAAGAGGGACCATCTCCTCATGAACGTCAAAT GGTACTACCGTCAATCTGAGGTTCCAGATTCTGTGTATCAGCATTTGGTTCAGGATCGACATAATGAAAATGACTCTGGAAGAGAACTTG TCATTACAGACCCAGTTATCAAGAACCGAGAGCTCTTCATTTCTGATTACGTTGACACTTACCATGCTGCTGCCCTTAGAGGGAAGTGTA ACATCTCCCATTTTTCTGACATATTTGCTGCTAGAGAGTTTAAAGCCCGAGTGGATTCATTTTTCTACATATTAGGATATAACCCTGAGA CAAGGAGGCTGAACAGTACCCAGGGGGAGATTCGTGTCGGTCCTAGTCATCAGGCCAAACTTCCAGATCTGCAACCATTTCCTTCTCCAG ATGGTGATACAGTGACCCAACATGAGGAACTGGTCTGGATGCCTGGAGTTAACGACTGTGACCTCCTTATGTACTTGAGGGCAGCAAGGA GCATGGCGGCATTTGCAGGAATGTGTGATGGAGGCTCTACAGAGGACGGCTGTGTCGCAGCCTCTCGGGATGACACCACTCTGAATGCAC TGAACACACTGCATGAAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCT GGACCGAGGACGAAGTGCTCCAACAGGACCAGGAGCTACAACGGATTCAGAAATGGGTGGAGACATTCCCAAGTGCCTGTCCTCATTGGC TATGGGGAGGCAAAGTTCGTGTCCAGCTCTATGACCCTGACTATATGAAGGTGATTCTGGGGAGATCAGACCCGAAATCCCATGGTTCCT ACAGATTCCTGGCTCCATGGATTGGGTACGGCTTGCTCCTGTTGAATGGGCAGACATGGTTCCAGCATCGACGGATGCTGACCCCAGCCT TCCACTATGACATCCTGAAGCCCTATGTGGGGCTCATGGCAGACTCTGTACGAGTGATGCTGGACAAATGGGAAGAGCTCCTTGGCCAGG ATTCCCCTCTGGAGGTCTTTCAGCACGTCTCCTTGATGACCCTGGACACCATCATGAAGTGTGCCTTCAGCCATCAGGGCAGCATCCAGG TGGACAGGAATTCTCAGTCCTACATACAGGCCATTAGTGACCTGAACAACCTGGTTTTTTCCCGTGTGAGGAATGCCTTTCACCAGAATG ACACCATCTACAGCCTGACCTCTGCTGGCCGCTGGACACACCGCGCCTGCCAGCTGGCCCATCAGCACACAGGAGACCAAGTGATCCAAC TGAGGAAGGCTCAACTACAGAAGGAGGGGGAGCTGGAGAAGATCAAGAGGAAGAGGCATTTGGATTTTCTGGATATCCTCCTCTTGGCCA AAATGGAGAATGGGAGCATCTTGTCAGACAAGGACCTCCGTGCTGAGGTGGACACGTTCATGTTTGAGGGCCACGACACCACAGCCAGTG GGATCTCCTGGATCCTCTATGCTCTGGCCACACACCCCAAGCATCAGGAGAGGTGCCGGGAGGAGATCCACAGCCTCCTGGGTGATGGAG CCTCCATCACCTGGAACCACCTGGACCAGATGCCCTACACCACCATGTGCATTAAGGAGGCACTGAGGCTCTACCCACCGGTGCCAGGCA TTGGCAGAGAGCTCAGCACTCCCGTCACCTTCCCTGATGGGCGCTCCTTGCCCAAAGGTATCATGGTCCTCCTCTCCATTTATGGCCTTC ACCACAACCCAAAAGTGTGGCCCAACCCAGAGGTGTTTGACCCTTTCCGTTTTGCACCGGGTTCTGCTCAACACAGCCACGCTTTCCTGC CCTTCTCAGGAGGATCAAGGAACTGCATCGGGAAACAATTTGCCATGAACGAGCTGAAGGTGGCCACGGCCCTGACCCTGCTCCGCTTTG AGCTGCTGCCTGATCCCACCAGGATCCCCATCCCCATTGCACGACTTGTGTTGAAATCCAAAAATGGAATCCACCTGCGTCTCAGGAGGC TCCCTAACCCTTGTGAAGACAAGGACCAGCTTTGAGGGCCTCCACCTGCCGTCCTGTCTTCCTGACCCCCGCTTCTGTCCCCTTCCTGTC TGCCCATATCCTGTTTTCTGTCTGCCCATACACCTGTCTCCTTCTTCCTGCCTGCTTGTCTGTTCCTATATTAGTTTCCTATTACTGCTG >In-frame_ENST00000400907_ENST00000371904_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(amino acids)=856AA_start in transcript=74_stop in transcript=2644 MTADKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEGGAKNYAESDHSEDEDNDNNSATAEESTKKNKKKPPKKKSRYERTD TGEITSYITEDDVVYRPGDCVYIESRRPNTPYFICSIQDFKLVHNSQACCRSPTPALCDPPACSLPVASQPPQHLSEAGRGPVGSKRDHL LMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVIKNRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARVDSFFYIL GYNPETRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMYLRAARSMAAFAGMCDGGSTEDGCVAASRDD TTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTEDEVLQQDQELQRIQKWVETFPSACPHWLWGGKVRVQLYDPDYMKVILGRSDP KSHGSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDILKPYVGLMADSVRVMLDKWEELLGQDSPLEVFQHVSLMTLDTIMKCAFSH QGSIQVDRNSQSYIQAISDLNNLVFSRVRNAFHQNDTIYSLTSAGRWTHRACQLAHQHTGDQVIQLRKAQLQKEGELEKIKRKRHLDFLD ILLLAKMENGSILSDKDLRAEVDTFMFEGHDTTASGISWILYALATHPKHQERCREEIHSLLGDGASITWNHLDQMPYTTMCIKEALRLY PPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRFAPGSAQHSHAFLPFSGGSRNCIGKQFAMNELKVATAL -------------------------------------------------------------- >In-frame_ENST00000400907_ENST00000462347_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(transcript)=2826nt_BP=1277nt TGAAGCCCAGGCTTACTGTCTACCTTTCACGGAGGCCTAGCCGTGAGAGGACAGAAGAAGGCACGTGGCGAATCATGACAGCGGACAAAG ACAAAGACAAAGACAAAGAGAAGGACCGGGACCGAGACCGGGACCGAGAGAGAGAGAAAAGAGACAAAGCAAGAGAGAGTGAGAATTCAA GGCCACGCCGGAGCTGTACCTTGGAAGGAGGAGCCAAAAATTATGCTGAGAGTGATCACAGTGAAGACGAGGACAATGACAACAATAGTG CCACCGCAGAGGAGTCCACGAAGAAGAATAAGAAGAAACCACCGAAAAAAAAGTCTCGTTATGAAAGGACAGATACCGGTGAGATAACAT CCTACATCACTGAAGATGATGTGGTCTACAGACCAGGAGACTGTGTGTATATCGAGAGTCGGAGGCCAAACACACCGTATTTCATCTGTA GCATTCAAGACTTCAAACTGGTCCACAACTCCCAGGCCTGTTGCAGATCTCCAACTCCTGCTTTGTGTGACCCCCCAGCATGCTCTCTGC CGGTGGCATCACAGCCACCACAGCATCTTTCTGAAGCCGGGAGAGGGCCTGTAGGGAGTAAGAGGGACCATCTCCTCATGAACGTCAAAT GGTACTACCGTCAATCTGAGGTTCCAGATTCTGTGTATCAGCATTTGGTTCAGGATCGACATAATGAAAATGACTCTGGAAGAGAACTTG TCATTACAGACCCAGTTATCAAGAACCGAGAGCTCTTCATTTCTGATTACGTTGACACTTACCATGCTGCTGCCCTTAGAGGGAAGTGTA ACATCTCCCATTTTTCTGACATATTTGCTGCTAGAGAGTTTAAAGCCCGAGTGGATTCATTTTTCTACATATTAGGATATAACCCTGAGA CAAGGAGGCTGAACAGTACCCAGGGGGAGATTCGTGTCGGTCCTAGTCATCAGGCCAAACTTCCAGATCTGCAACCATTTCCTTCTCCAG ATGGTGATACAGTGACCCAACATGAGGAACTGGTCTGGATGCCTGGAGTTAACGACTGTGACCTCCTTATGTACTTGAGGGCAGCAAGGA GCATGGCGGCATTTGCAGGAATGTGTGATGGAGGCTCTACAGAGGACGGCTGTGTCGCAGCCTCTCGGGATGACACCACTCTGAATGCAC TGAACACACTGCATGAAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCT GGACCGAGGACGAAGTGCTCCAACAGGACCAGGAGCTACAACGGATTCAGAAATGGGTGGAGACATTCCCAAGTGCCTGTCCTCATTGGC TATGGGGAGGCAAAGTTCGTGTCCAGCTCTATGACCCTGACTATATGAAGGTGATTCTGGGGAGATCAGACCCGAAATCCCATGGTTCCT ACAGATTCCTGGCTCCATGGATTGGGTACGGCTTGCTCCTGTTGAATGGGCAGACATGGTTCCAGCATCGACGGATGCTGACCCCAGCCT TCCACTATGACATCCTGAAGCCCTATGTGGGGCTCATGGCAGACTCTGTACGAGTGATGCTGGACAAATGGGAAGAGCTCCTTGGCCAGG ATTCCCCTCTGGAGGTCTTTCAGCACGTCTCCTTGATGACCCTGGACACCATCATGAAGTGTGCCTTCAGCCATCAGGGCAGCATCCAGG TGGACAGACCAAGTGATCCAACTGAGGAAGGCTCAACTACAGAAGGAGGGGGAGCTGGAGAAGATCAAGAGGAAGAGGCATTTGGATTTT CTGGATATCCTCCTCTTGGCCAAAGGGCCCCTGGTCTGCCCAGGCCTTGCTGGTGTTCAGGATGGAATTGTTTCAGGAACCACCTGGACC AGATGCCCTACACCACCATGTGCATTAAGGAGGCACTGAGGCTCTACCCACCGGTGCCAGGCATTGGCAGAGAGCTCAGCACTCCCGTCA CCTTCCCTGATGGGCGCTCCTTGCCCAAAGGTATCATGGTCCTCCTCTCCATTTATGGCCTTCACCACAACCCAAAAGTGTGGCCCAACC CAGAGGTGTTTGACCCTTTCCGTTTTGCACCGGGTTCTGCTCAACACAGCCACGCTTTCCTGCCCTTCTCAGGAGGATCAAGGAACTGCA TCGGGAAACAATTTGCCATGAACGAGCTGAAGGTGGCCACGGCCCTGACCCTGCTCCGCTTTGAGCTGCTGCCTGATCCCACCAGGATCC CCATCCCCATTGCACGACTTGTGTTGAAATCCAAAAATGGAATCCACCTGCGTCTCAGGAGGCTCCCTAACCCTTGTGAAGACAAGGACC AGCTTTGAGGGCCTCCACCTGCCGTCCTGTCTTCCTGACCCCCGCTTCTGTCCCCTTCCTGTCTGCCCATATCCTGTTTTCTGTCTGCCC ACCTTCCCTTCTTCCCACCTGCCTGCTGTCCCCCAGTCTGCCTGCCCTTCTCTCTCTCACCTTTCTCCAGGCTCCCTACCTGCTTGTCTA CCTGTCTCCTACCCACCTGTATCTCTTGTTGGGAGAAAAGCTGAGTGTTGGGAGAAGCTGAGGCCGAGCTTGCATGTCTGACATAATGTA AAAGAGTCTTGGATCATGTCCAGGATCCAGGGTCTAAAACCCCTTGTGGCCTTTGGAACACCAAGCTCTGTGCTGAAGGGTGGAAGGCTA CCCTGACGCACCATAATCTAAGCCCGGGGCATAAAACCCCTCGTGGCTTGGATAGAATCCAGGGCTCGTGGCTCTGGAATGTGTCTGAAC >In-frame_ENST00000400907_ENST00000462347_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(amino acids)=757AA_start in transcript=74_stop in transcript=2347 MTADKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEGGAKNYAESDHSEDEDNDNNSATAEESTKKNKKKPPKKKSRYERTD TGEITSYITEDDVVYRPGDCVYIESRRPNTPYFICSIQDFKLVHNSQACCRSPTPALCDPPACSLPVASQPPQHLSEAGRGPVGSKRDHL LMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVIKNRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARVDSFFYIL GYNPETRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMYLRAARSMAAFAGMCDGGSTEDGCVAASRDD TTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTEDEVLQQDQELQRIQKWVETFPSACPHWLWGGKVRVQLYDPDYMKVILGRSDP KSHGSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDILKPYVGLMADSVRVMLDKWEELLGQDSPLEVFQHVSLMTLDTIMKCAFSH QGSIQVDRPSDPTEEGSTTEGGGAGEDQEEEAFGFSGYPPLGQRAPGLPRPCWCSGWNCFRNHLDQMPYTTMCIKEALRLYPPVPGIGRE LSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRFAPGSAQHSHAFLPFSGGSRNCIGKQFAMNELKVATALTLLRFELLP -------------------------------------------------------------- >In-frame_ENST00000400907_ENST00000371905_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(transcript)=2776nt_BP=1277nt TGAAGCCCAGGCTTACTGTCTACCTTTCACGGAGGCCTAGCCGTGAGAGGACAGAAGAAGGCACGTGGCGAATCATGACAGCGGACAAAG ACAAAGACAAAGACAAAGAGAAGGACCGGGACCGAGACCGGGACCGAGAGAGAGAGAAAAGAGACAAAGCAAGAGAGAGTGAGAATTCAA GGCCACGCCGGAGCTGTACCTTGGAAGGAGGAGCCAAAAATTATGCTGAGAGTGATCACAGTGAAGACGAGGACAATGACAACAATAGTG CCACCGCAGAGGAGTCCACGAAGAAGAATAAGAAGAAACCACCGAAAAAAAAGTCTCGTTATGAAAGGACAGATACCGGTGAGATAACAT CCTACATCACTGAAGATGATGTGGTCTACAGACCAGGAGACTGTGTGTATATCGAGAGTCGGAGGCCAAACACACCGTATTTCATCTGTA GCATTCAAGACTTCAAACTGGTCCACAACTCCCAGGCCTGTTGCAGATCTCCAACTCCTGCTTTGTGTGACCCCCCAGCATGCTCTCTGC CGGTGGCATCACAGCCACCACAGCATCTTTCTGAAGCCGGGAGAGGGCCTGTAGGGAGTAAGAGGGACCATCTCCTCATGAACGTCAAAT GGTACTACCGTCAATCTGAGGTTCCAGATTCTGTGTATCAGCATTTGGTTCAGGATCGACATAATGAAAATGACTCTGGAAGAGAACTTG TCATTACAGACCCAGTTATCAAGAACCGAGAGCTCTTCATTTCTGATTACGTTGACACTTACCATGCTGCTGCCCTTAGAGGGAAGTGTA ACATCTCCCATTTTTCTGACATATTTGCTGCTAGAGAGTTTAAAGCCCGAGTGGATTCATTTTTCTACATATTAGGATATAACCCTGAGA CAAGGAGGCTGAACAGTACCCAGGGGGAGATTCGTGTCGGTCCTAGTCATCAGGCCAAACTTCCAGATCTGCAACCATTTCCTTCTCCAG ATGGTGATACAGTGACCCAACATGAGGAACTGGTCTGGATGCCTGGAGTTAACGACTGTGACCTCCTTATGTACTTGAGGGCAGCAAGGA GCATGGCGGCATTTGCAGGAATGTGTGATGGAGGCTCTACAGAGGACGGCTGTGTCGCAGCCTCTCGGGATGACACCACTCTGAATGCAC TGAACACACTGCATGAAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCT GGACCGAGGACGAAGTGCTCCAACAGGACCAGGAGCTACAACGGATTCAGAAATGGGTGGAGACATTCCCAAGTGCCTGTCCTCATTGGC TATGGGGAGGCAAAGTTCGTGTCCAGCTCTATGACCCTGACTATATGAAGGTGATTCTGGGGAGATCAGACCCGAAATCCCATGGTTCCT ACAGATTCCTGGCTCCATGGATTGGGTACGGCTTGCTCCTGTTGAATGGGCAGACATGGTTCCAGCATCGACGGATGCTGACCCCAGCCT TCCACTATGACATCCTGAAGCCCTATGTGGGGCTCATGGCAGACTCTGTACGAGTGATGCTGGACAAATGGGAAGAGCTCCTTGGCCAGG ATTCCCCTCTGGAGGTCTTTCAGCACGTCTCCTTGATGACCCTGGACACCATCATGAAGTGTGCCTTCAGCCATCAGGGCAGCATCCAGG TGGACAGGAATTCTCAGTCCTACATACAGGCCATTAGTGACCTGAACAACCTGGTTTTTTCCCGTGTGAGGAATGCCTTTCACCAGAATG ACACCATCTACAGCCTGACCTCTGCTGGCCGCTGGACACACCGCGCCTGCCAGCTGGCCCATCAGCACACAGACCAAGTGATCCAACTGA GGAAGGCTCAACTACAGAAGGAGGGGGAGCTGGAGAAGATCAAGAGGAAGAGGCATTTGGATTTTCTGGATATCCTCCTCTTGGCCAAAA TGGAGAATGGGAGCATCTTGTCAGACAAGGACCTCCGTGCTGAGGTGGACACGTTCATGTTTGAGGGCCACGACACCACAGCCAGTGGGA TCTCCTGGATCCTCTATGCTCTGGCCACACACCCCAAGCATCAGGAGAGGTGCCGGGAGGAGATCCACAGCCTCCTGGGTGATGGAGCCT CCATCACCTGGAACCACCTGGACCAGATGCCCTACACCACCATGTGCATTAAGGAGGCACTGAGGCTCTACCCACCGGTGCCAGGCATTG GCAGAGAGCTCAGCACTCCCGTCACCTTCCCTGATGGGCGCTCCTTGCCCAAAGGTATCATGGTCCTCCTCTCCATTTATGGCCTTCACC ACAACCCAAAAGTGTGGCCCAACCCAGAGGTGTTTGACCCTTTCCGTTTTGCACCGGGTTCTGCTCAACACAGCCACGCTTTCCTGCCCT TCTCAGGAGGATCAAGGTGAGACGTCCTGTGTGGTAATTCGAATAGAGGAATGAGGGAAGTCTCTGGTCAACCCTCTGATCTTTGTGAGC CTGATGTTCATATGTGGCATCTTCAGGTGTGCTCTTAAATGTTGGTATTTGTGGGAAAGTCAGGCACCTGGTGTGGGCGTCTCTGTGTAC AAAAGGAAGGTGGCATTCAGAGCACCCCATGGAGACTTTGCTCCCTCTGCTTCTTCAAATGGGCAGCCTGAATTCACTGTCAGTGCATGT >In-frame_ENST00000400907_ENST00000371905_TCGA-D8-A1XZ-01A_RERE_chr1_8525985_-_CYP4A11_chr1_47403809_length(amino acids)=791AA_start in transcript=74_stop in transcript=2449 MTADKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEGGAKNYAESDHSEDEDNDNNSATAEESTKKNKKKPPKKKSRYERTD TGEITSYITEDDVVYRPGDCVYIESRRPNTPYFICSIQDFKLVHNSQACCRSPTPALCDPPACSLPVASQPPQHLSEAGRGPVGSKRDHL LMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVIKNRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARVDSFFYIL GYNPETRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMYLRAARSMAAFAGMCDGGSTEDGCVAASRDD TTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTEDEVLQQDQELQRIQKWVETFPSACPHWLWGGKVRVQLYDPDYMKVILGRSDP KSHGSYRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDILKPYVGLMADSVRVMLDKWEELLGQDSPLEVFQHVSLMTLDTIMKCAFSH QGSIQVDRNSQSYIQAISDLNNLVFSRVRNAFHQNDTIYSLTSAGRWTHRACQLAHQHTDQVIQLRKAQLQKEGELEKIKRKRHLDFLDI LLLAKMENGSILSDKDLRAEVDTFMFEGHDTTASGISWILYALATHPKHQERCREEIHSLLGDGASITWNHLDQMPYTTMCIKEALRLYP -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for RERE-CYP4A11 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for RERE-CYP4A11 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
| Tgene | CYP4A11 | Q02928 | DB00157 | NADH | Small molecule | Approved|Nutraceutical | |
| Tgene | CYP4A11 | Q02928 | DB00157 | NADH | Small molecule | Approved|Nutraceutical |
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Related Diseases for RERE-CYP4A11 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | RERE | C4310772 | NEURODEVELOPMENTAL DISORDER WITH OR WITHOUT ANOMALIES OF THE BRAIN, EYE, OR HEART | 3 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
| Hgene | RERE | C0087031 | Juvenile-Onset Still Disease | 1 | CTD_human |
| Hgene | RERE | C1842870 | Chromosome 1p36 Deletion Syndrome | 1 | ORPHANET |
| Hgene | RERE | C3495559 | Juvenile arthritis | 1 | CTD_human |
| Hgene | RERE | C3714758 | Juvenile psoriatic arthritis | 1 | CTD_human |
| Hgene | RERE | C4552091 | Polyarthritis, Juvenile, Rheumatoid Factor Negative | 1 | CTD_human |
| Hgene | RERE | C4704862 | Polyarthritis, Juvenile, Rheumatoid Factor Positive | 1 | CTD_human |
| Tgene | CYP4A11 | C2239176 | Liver carcinoma | 1 | CTD_human |
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