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 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:SCN8A-ANO2 (FusionGDB2 ID:79201) |
Fusion Gene Summary for SCN8A-ANO2 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: SCN8A-ANO2 | Fusion gene ID: 79201 | Hgene | Tgene | Gene symbol | SCN8A | ANO2 | Gene ID | 6334 | 57101 |
| Gene name | sodium voltage-gated channel alpha subunit 8 | anoctamin 2 | |
| Synonyms | BFIS5|CERIII|CIAT|EIEE13|MED|MYOCL2|NaCh6|Nav1.6|PN4 | C12orf3|TMEM16B | |
| Cytomap | 12q13.13 | 12p13.31 | |
| Type of gene | protein-coding | protein-coding | |
| Description | sodium channel protein type 8 subunit alphahNa6/Scn8a voltage-gated sodium channelsodium channel, voltage gated, type VIII, alpha subunitvoltage-gated sodium channel subunit alpha Nav1.6voltage-gated sodium channel type VIII alpha protein | anoctamin-2anoctamin 2, calcium activated chloride channeltransmembrane protein 16B (eight membrane-spanning domains) | |
| Modification date | 20200313 | 20200329 | |
| UniProtAcc | . | Q9NQ90 | |
| Ensembl transtripts involved in fusion gene | ENST00000546961, ENST00000550891, ENST00000354534, ENST00000545061, | ENST00000327087, ENST00000546188, ENST00000356134, ENST00000538154, | |
| Fusion gene scores | * DoF score | 7 X 8 X 5=280 | 12 X 11 X 8=1056 |
| # samples | 8 | 15 | |
| ** MAII score | log2(8/280*10)=-1.8073549220576 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(15/1056*10)=-2.81557542886257 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: SCN8A [Title/Abstract] AND ANO2 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | SCN8A(52056877)-ANO2(5756967), # samples:2 | ||
| Anticipated loss of major functional domain due to fusion event. | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene breakpoints across SCN8A (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene breakpoints across ANO2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | SARC | TCGA-3B-A9HL-01A | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| ChimerDB4 | SARC | TCGA-3B-A9HL-01A | SCN8A | chr12 | 52056877 | - | ANO2 | chr12 | 5756967 | - |
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Fusion Gene ORF analysis for SCN8A-ANO2 |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| intron-3CDS | ENST00000546961 | ENST00000327087 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| intron-3CDS | ENST00000546961 | ENST00000546188 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| intron-3CDS | ENST00000546961 | ENST00000356134 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| intron-5UTR | ENST00000546961 | ENST00000538154 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| In-frame | ENST00000550891 | ENST00000327087 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| In-frame | ENST00000550891 | ENST00000546188 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| In-frame | ENST00000550891 | ENST00000356134 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| 5CDS-5UTR | ENST00000550891 | ENST00000538154 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| In-frame | ENST00000354534 | ENST00000327087 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| In-frame | ENST00000354534 | ENST00000546188 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| In-frame | ENST00000354534 | ENST00000356134 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| 5CDS-5UTR | ENST00000354534 | ENST00000538154 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| In-frame | ENST00000545061 | ENST00000327087 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| In-frame | ENST00000545061 | ENST00000546188 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| In-frame | ENST00000545061 | ENST00000356134 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| 5CDS-5UTR | ENST00000545061 | ENST00000538154 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000550891 | SCN8A | chr12 | 52056877 | + | ENST00000327087 | ANO2 | chr12 | 5756967 | - | 2504 | 404 | 110 | 1855 | 581 |
| ENST00000550891 | SCN8A | chr12 | 52056877 | + | ENST00000546188 | ANO2 | chr12 | 5756967 | - | 2501 | 404 | 110 | 1855 | 581 |
| ENST00000550891 | SCN8A | chr12 | 52056877 | + | ENST00000356134 | ANO2 | chr12 | 5756967 | - | 2501 | 404 | 110 | 1855 | 581 |
| ENST00000354534 | SCN8A | chr12 | 52056877 | + | ENST00000327087 | ANO2 | chr12 | 5756967 | - | 2554 | 454 | 160 | 1905 | 581 |
| ENST00000354534 | SCN8A | chr12 | 52056877 | + | ENST00000546188 | ANO2 | chr12 | 5756967 | - | 2551 | 454 | 160 | 1905 | 581 |
| ENST00000354534 | SCN8A | chr12 | 52056877 | + | ENST00000356134 | ANO2 | chr12 | 5756967 | - | 2551 | 454 | 160 | 1905 | 581 |
| ENST00000545061 | SCN8A | chr12 | 52056877 | + | ENST00000327087 | ANO2 | chr12 | 5756967 | - | 2430 | 330 | 36 | 1781 | 581 |
| ENST00000545061 | SCN8A | chr12 | 52056877 | + | ENST00000546188 | ANO2 | chr12 | 5756967 | - | 2427 | 330 | 36 | 1781 | 581 |
| ENST00000545061 | SCN8A | chr12 | 52056877 | + | ENST00000356134 | ANO2 | chr12 | 5756967 | - | 2427 | 330 | 36 | 1781 | 581 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000550891 | ENST00000327087 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - | 0.003520035 | 0.9964799 |
| ENST00000550891 | ENST00000546188 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - | 0.003549708 | 0.9964503 |
| ENST00000550891 | ENST00000356134 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - | 0.003549708 | 0.9964503 |
| ENST00000354534 | ENST00000327087 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - | 0.003916376 | 0.9960836 |
| ENST00000354534 | ENST00000546188 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - | 0.003974842 | 0.9960252 |
| ENST00000354534 | ENST00000356134 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - | 0.003974842 | 0.9960252 |
| ENST00000545061 | ENST00000327087 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - | 0.003328319 | 0.9966717 |
| ENST00000545061 | ENST00000546188 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - | 0.00335551 | 0.9966445 |
| ENST00000545061 | ENST00000356134 | SCN8A | chr12 | 52056877 | + | ANO2 | chr12 | 5756967 | - | 0.00335551 | 0.9966445 |
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Fusion Genomic Features for SCN8A-ANO2 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for SCN8A-ANO2 |
| Go to FGviewer for the breakpoints of chr12:52056877-chr12:5756967 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | ANO2 |
| FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Calcium-activated chloride channel (CaCC) which may play a role in olfactory signal transduction. Odorant molecules bind to odor-sensing receptors (OSRs), leading to an increase in calcium entry that activates CaCC current which amplifies the depolarization of the OSR cells, ANO2 seems to be the underlying chloride channel involved in this process. May mediate light perception amplification in retina. {ECO:0000269|PubMed:19474308, ECO:0000269|PubMed:20056604, ECO:0000269|PubMed:21890523, ECO:0000269|PubMed:21984732}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 1001_1003 | 515.0 | 999.0 | Motif | Note=DLG4 binding (PDZ) | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 1001_1003 | 516.0 | 1000.0 | Motif | Note=DLG4 binding (PDZ) | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 560_582 | 515.0 | 999.0 | Topological domain | Extracellular | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 604_623 | 515.0 | 999.0 | Topological domain | Cytoplasmic | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 645_748 | 515.0 | 999.0 | Topological domain | Extracellular | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 770_801 | 515.0 | 999.0 | Topological domain | Cytoplasmic | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 823_907 | 515.0 | 999.0 | Topological domain | Extracellular | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 929_1003 | 515.0 | 999.0 | Topological domain | Cytoplasmic | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 560_582 | 516.0 | 1000.0 | Topological domain | Extracellular | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 604_623 | 516.0 | 1000.0 | Topological domain | Cytoplasmic | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 645_748 | 516.0 | 1000.0 | Topological domain | Extracellular | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 770_801 | 516.0 | 1000.0 | Topological domain | Cytoplasmic | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 823_907 | 516.0 | 1000.0 | Topological domain | Extracellular | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 929_1003 | 516.0 | 1000.0 | Topological domain | Cytoplasmic | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 539_559 | 515.0 | 999.0 | Transmembrane | Helical | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 583_603 | 515.0 | 999.0 | Transmembrane | Helical | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 624_644 | 515.0 | 999.0 | Transmembrane | Helical | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 749_769 | 515.0 | 999.0 | Transmembrane | Helical | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 802_822 | 515.0 | 999.0 | Transmembrane | Helical | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 908_928 | 515.0 | 999.0 | Transmembrane | Helical | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 539_559 | 516.0 | 1000.0 | Transmembrane | Helical | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 583_603 | 516.0 | 1000.0 | Transmembrane | Helical | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 624_644 | 516.0 | 1000.0 | Transmembrane | Helical | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 749_769 | 516.0 | 1000.0 | Transmembrane | Helical | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 802_822 | 516.0 | 1000.0 | Transmembrane | Helical | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 908_928 | 516.0 | 1000.0 | Transmembrane | Helical |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1895_1924 | 92.0 | 1981.0 | Domain | IQ |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1895_1924 | 92.0 | 1940.0 | Domain | IQ |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1400_1421 | 92.0 | 1981.0 | Intramembrane | Pore-forming |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1691_1713 | 92.0 | 1981.0 | Intramembrane | Pore-forming |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 356_380 | 92.0 | 1981.0 | Intramembrane | Pore-forming |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 922_942 | 92.0 | 1981.0 | Intramembrane | Pore-forming |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1400_1421 | 92.0 | 1940.0 | Intramembrane | Pore-forming |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1691_1713 | 92.0 | 1940.0 | Intramembrane | Pore-forming |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 356_380 | 92.0 | 1940.0 | Intramembrane | Pore-forming |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 922_942 | 92.0 | 1940.0 | Intramembrane | Pore-forming |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 893_900 | 92.0 | 1981.0 | Nucleotide binding | ATP |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 893_900 | 92.0 | 1940.0 | Nucleotide binding | ATP |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 114_442 | 92.0 | 1981.0 | Repeat | I |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1180_1495 | 92.0 | 1981.0 | Repeat | III |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1504_1801 | 92.0 | 1981.0 | Repeat | IV |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 735_1007 | 92.0 | 1981.0 | Repeat | II |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 114_442 | 92.0 | 1940.0 | Repeat | I |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1180_1495 | 92.0 | 1940.0 | Repeat | III |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1504_1801 | 92.0 | 1940.0 | Repeat | IV |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 735_1007 | 92.0 | 1940.0 | Repeat | II |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1218_1230 | 92.0 | 1981.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1250_1263 | 92.0 | 1981.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1283_1290 | 92.0 | 1981.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1310_1326 | 92.0 | 1981.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1347_1399 | 92.0 | 1981.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1422_1438 | 92.0 | 1981.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1461_1523 | 92.0 | 1981.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 152_158 | 92.0 | 1981.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1542_1552 | 92.0 | 1981.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1572_1583 | 92.0 | 1981.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1602_1614 | 92.0 | 1981.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1632_1650 | 92.0 | 1981.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1669_1690 | 92.0 | 1981.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1714_1742 | 92.0 | 1981.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1766_1980 | 92.0 | 1981.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 180_193 | 92.0 | 1981.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1_132 | 92.0 | 1981.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 212_217 | 92.0 | 1981.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 235_253 | 92.0 | 1981.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 274_355 | 92.0 | 1981.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 381_387 | 92.0 | 1981.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 409_753 | 92.0 | 1981.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 773_783 | 92.0 | 1981.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 804_817 | 92.0 | 1981.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 838_839 | 92.0 | 1981.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 858_873 | 92.0 | 1981.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 893_921 | 92.0 | 1981.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 943_955 | 92.0 | 1981.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 977_1199 | 92.0 | 1981.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1218_1230 | 92.0 | 1940.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1250_1263 | 92.0 | 1940.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1283_1290 | 92.0 | 1940.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1310_1326 | 92.0 | 1940.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1347_1399 | 92.0 | 1940.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1422_1438 | 92.0 | 1940.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1461_1523 | 92.0 | 1940.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 152_158 | 92.0 | 1940.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1542_1552 | 92.0 | 1940.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1572_1583 | 92.0 | 1940.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1602_1614 | 92.0 | 1940.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1632_1650 | 92.0 | 1940.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1669_1690 | 92.0 | 1940.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1714_1742 | 92.0 | 1940.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1766_1980 | 92.0 | 1940.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 180_193 | 92.0 | 1940.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1_132 | 92.0 | 1940.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 212_217 | 92.0 | 1940.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 235_253 | 92.0 | 1940.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 274_355 | 92.0 | 1940.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 381_387 | 92.0 | 1940.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 409_753 | 92.0 | 1940.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 773_783 | 92.0 | 1940.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 804_817 | 92.0 | 1940.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 838_839 | 92.0 | 1940.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 858_873 | 92.0 | 1940.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 893_921 | 92.0 | 1940.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 943_955 | 92.0 | 1940.0 | Topological domain | Extracellular |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 977_1199 | 92.0 | 1940.0 | Topological domain | Cytoplasmic |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1200_1217 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS1 of repeat III |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1231_1249 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS2 of repeat III |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1264_1282 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS3 of repeat III |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1291_1309 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS4 of repeat III |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1327_1346 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS5 of repeat III |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 133_151 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS1 of repeat I |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1439_1460 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS6 of repeat III |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1524_1541 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS1 of repeat IV |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1553_1571 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS2 of repeat IV |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1584_1601 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS3 of repeat IV |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 159_179 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS2 of repeat I |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1615_1631 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS4 of repeat IV |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1651_1668 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS5 of repeat IV |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 1743_1765 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS6 of repeat IV |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 194_211 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS3 of repeat I |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 218_234 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS4 of repeat I |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 254_273 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS5 of repeat I |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 388_408 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS6 of repeat I |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 754_772 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS1 of repeat II |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 784_803 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS2 of repeat II |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 818_837 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS3 of repeat II |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 840_857 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS4 of repeat II |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 874_892 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS5 of repeat II |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000354534 | + | 2 | 27 | 956_976 | 92.0 | 1981.0 | Transmembrane | Helical%3B Name%3DS6 of repeat II |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1200_1217 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS1 of repeat III |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1231_1249 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS2 of repeat III |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1264_1282 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS3 of repeat III |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1291_1309 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS4 of repeat III |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1327_1346 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS5 of repeat III |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 133_151 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS1 of repeat I |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1439_1460 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS6 of repeat III |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1524_1541 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS1 of repeat IV |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1553_1571 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS2 of repeat IV |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1584_1601 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS3 of repeat IV |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 159_179 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS2 of repeat I |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1615_1631 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS4 of repeat IV |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1651_1668 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS5 of repeat IV |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 1743_1765 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS6 of repeat IV |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 194_211 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS3 of repeat I |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 218_234 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS4 of repeat I |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 254_273 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS5 of repeat I |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 388_408 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS6 of repeat I |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 754_772 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS1 of repeat II |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 784_803 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS2 of repeat II |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 818_837 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS3 of repeat II |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 840_857 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS4 of repeat II |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 874_892 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS5 of repeat II |
| Hgene | SCN8A | chr12:52056877 | chr12:5756967 | ENST00000545061 | + | 1 | 25 | 956_976 | 92.0 | 1940.0 | Transmembrane | Helical%3B Name%3DS6 of repeat II |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 1_365 | 515.0 | 999.0 | Topological domain | Cytoplasmic | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 387_434 | 515.0 | 999.0 | Topological domain | Extracellular | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 456_538 | 515.0 | 999.0 | Topological domain | Cytoplasmic | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 1_365 | 516.0 | 1000.0 | Topological domain | Cytoplasmic | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 387_434 | 516.0 | 1000.0 | Topological domain | Extracellular | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 456_538 | 516.0 | 1000.0 | Topological domain | Cytoplasmic | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 366_386 | 515.0 | 999.0 | Transmembrane | Helical | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000327087 | 14 | 26 | 435_455 | 515.0 | 999.0 | Transmembrane | Helical | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 366_386 | 516.0 | 1000.0 | Transmembrane | Helical | |
| Tgene | ANO2 | chr12:52056877 | chr12:5756967 | ENST00000356134 | 15 | 27 | 435_455 | 516.0 | 1000.0 | Transmembrane | Helical |
Top |
Fusion Gene Sequence for SCN8A-ANO2 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >In-frame_ENST00000550891_ENST00000327087_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(transcript)=2504nt_BP=404nt GAGACGCGAGTCTGAGAGCCTGCGGGCGGGCGGCGCGCTGCAGGCGAGCGGGCGAGCGGGCGCGCCCTGCAGGGAGCTGACCTGTCCTGG ACGCAGCATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCACCACCAGGCCCTGATAGTTTCAAGCCTTTCA CCCCTGAGTCACTGGCAAACATTGAGAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGTCATCGGGAGGACG ATGAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAGCAGGGAAGAGTTTGCCTTTCATCTACGGGGACATCCCCCAAGGCCTGGTTG CAGTTCCCCTGGAGGACTTTGACCCATACTATTTGACGCAGAAAGATGATGAAGATAAACTGACCTGGAAGGATCGTTTCCCAGGTTACC TGATGAACTTTGCCTCCATCTTATTCATGATTGCCCTGACATTCTCAATCGTCTTTGGGGTGATAGTGTATCGAATAACAACTGCAGCCG CTCTGTCTCTCAATAAGGCTACACGCTCCAATGTCCGGGTGACAGTGACAGCAACAGCAGTCATCATCAACCTCGTGGTCATCCTCATCC TGGACGAGATCTACGGCGCTGTGGCCAAGTGGCTCACCAAAATTGAGGTTCCGAAAACAGAACAGACTTTTGAAGAGCGCCTGATCCTCA AAGCTTTCTTGCTCAAGTTTGTCAATGCCTACTCCCCCATCTTCTATGTGGCCTTTTTCAAAGGGAGGTTTGTGGGCAGGCCTGGAAGCT ACGTCTATGTATTCGATGGTTACCGCATGGAAGAGTGTGCTCCAGGGGGCTGTCTCATGGAGCTCTGCATTCAGCTCAGCATCATCATGT TGGGGAAGCAGTTGATCCAGAACAACATCTTTGAGATTGGAGTCCCGAAGCTAAAGAAACTATTTCGAAAGCTGAAAGATGAGACCGAAG CTGGAGAAACTGACTCTGCCCATTCGAAACATCCAGAGCAGTGGGACCTAGACTACAGCTTGGAACCATACACAGGACTGACTCCGGAGT ACATGGAAATGATCATCCAGTTTGGTTTTGTCACCCTCTTCGTGGCCTCCTTTCCCCTGGCACCTGTGTTTGCCCTCCTCAACAACGTCA TTGAAGTGCGGCTCGATGCAAAGAAGTTTGTTACAGAGCTGAGACGGCCGGATGCTGTAAGAACCAAAGATATCGGAATCTGGTTTGACA TTCTCTCTGGAATTGGCAAGTTCTCTGTTATCAGCAACGCTTTTGTCATTGCGATCACCTCCGACTTTATCCCCCGCCTGGTGTACCAGT ACTCCTACAGTCACAATGGGACTCTGCACGGCTTTGTCAACCACACCCTCTCCTTTTTCAACGTCAGCCAGCTGAAGGAGGGGACGCAGC CAGAAAACTCACAGTTTGACCAGGAGGTTCAGTTCTGCAGGTTTAAGGATTACCGAGAGCCGCCATGGGCCCCGAACCCTTATGAGTTTT CGAAACAGTACTGGTTTATTCTGTCCGCCCGTCTGGCTTTTGTCATAATCTTCCAGAACCTCGTGATGTTCCTGAGCGTCCTCGTGGACT GGATGATTCCAGACATCCCCACGGACATCAGCGACCAGATCAAGAAAGAGAAGAGCTTATTAGTGGATTTCTTCCTGAAAGAGGAGCATG AGAAGCTCAAGCTGATGGATGAGCCGGCTCTGAGGAGCCCAGGAGGTGGGGATCGAAGCAGGAGCCGGGCAGCCAGCTCAGCACCTTCAG GCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCTCTCAGCACACCAATGTGTGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCAG CAGAGACACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGA GGGGGCAGTGTGTAAAAAGAAAGAGCCTGACAGAATGAGTGTAGGAAGGAAGAGAAATGATGCTACATCTCAGAAACTTCAAGCTTAAGT TTCTTTTAGGTCCCCTTTTAAGCTGCATCCTTTTGAGGGATTGGAACCCCACTGGGGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGC ATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAGGAGCACAGCA TCCCCTACTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAATTAAGTTACAAGGCTGA ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA >In-frame_ENST00000550891_ENST00000327087_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(amino acids)=581AA_start in transcript=110_stop in transcript=1855 MLQDEKMAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLEAGKSLPFIYGDIPQGLVAVPLEDF DPYYLTQKDDEDKLTWKDRFPGYLMNFASILFMIALTFSIVFGVIVYRITTAAALSLNKATRSNVRVTVTATAVIINLVVILILDEIYGA VAKWLTKIEVPKTEQTFEERLILKAFLLKFVNAYSPIFYVAFFKGRFVGRPGSYVYVFDGYRMEECAPGGCLMELCIQLSIIMLGKQLIQ NNIFEIGVPKLKKLFRKLKDETEAGETDSAHSKHPEQWDLDYSLEPYTGLTPEYMEMIIQFGFVTLFVASFPLAPVFALLNNVIEVRLDA KKFVTELRRPDAVRTKDIGIWFDILSGIGKFSVISNAFVIAITSDFIPRLVYQYSYSHNGTLHGFVNHTLSFFNVSQLKEGTQPENSQFD QEVQFCRFKDYREPPWAPNPYEFSKQYWFILSARLAFVIIFQNLVMFLSVLVDWMIPDIPTDISDQIKKEKSLLVDFFLKEEHEKLKLMD -------------------------------------------------------------- >In-frame_ENST00000550891_ENST00000546188_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(transcript)=2501nt_BP=404nt GAGACGCGAGTCTGAGAGCCTGCGGGCGGGCGGCGCGCTGCAGGCGAGCGGGCGAGCGGGCGCGCCCTGCAGGGAGCTGACCTGTCCTGG ACGCAGCATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCACCACCAGGCCCTGATAGTTTCAAGCCTTTCA CCCCTGAGTCACTGGCAAACATTGAGAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGTCATCGGGAGGACG ATGAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAGCAGGGAAGAGTTTGCCTTTCATCTACGGGGACATCCCCCAAGGCCTGGTTG CAGTTCCCCTGGAGGACTTTGACCCATACTATTTGACGCAGAAAGATGATGAAGATAAACTGACCTGGAAGGATCGTTTCCCAGGTTACC TGATGAACTTTGCCTCCATCTTATTCATGATTGCCCTGACATTCTCAATCGTCTTTGGGGTGATAGTGTATCGAATAACAACTGCAGCCG CTCTGTCTCTCAATAAGGCTACACGCTCCAATGTCCGGGTGACAGTGACAGCAACAGCAGTCATCATCAACCTCGTGGTCATCCTCATCC TGGACGAGATCTACGGCGCTGTGGCCAAGTGGCTCACCAAAATTGAGGTTCCGAAAACAGAACAGACTTTTGAAGAGCGCCTGATCCTCA AAGCTTTCTTGCTCAAGTTTGTCAATGCCTACTCCCCCATCTTCTATGTGGCCTTTTTCAAAGGGAGGTTTGTGGGCAGGCCTGGAAGCT ACGTCTATGTATTCGATGGTTACCGCATGGAAGAGTGTGCTCCAGGGGGCTGTCTCATGGAGCTCTGCATTCAGCTCAGCATCATCATGT TGGGGAAGCAGTTGATCCAGAACAACATCTTTGAGATTGGAGTCCCGAAGCTAAAGAAACTATTTCGAAAGCTGAAAGATGAGACCGAAG CTGGAGAAACTGACTCTGCCCATTCGAAACATCCAGAGCAGTGGGACCTAGACTACAGCTTGGAACCATACACAGGACTGACTCCGGAGT ACATGGAAATGATCATCCAGTTTGGTTTTGTCACCCTCTTCGTGGCCTCCTTTCCCCTGGCACCTGTGTTTGCCCTCCTCAACAACGTCA TTGAAGTGCGGCTCGATGCAAAGAAGTTTGTTACAGAGCTGAGACGGCCGGATGCTGTAAGAACCAAAGATATCGGAATCTGGTTTGACA TTCTCTCTGGAATTGGCAAGTTCTCTGTTATCAGCAACGCTTTTGTCATTGCGATCACCTCCGACTTTATCCCCCGCCTGGTGTACCAGT ACTCCTACAGTCACAATGGGACTCTGCACGGCTTTGTCAACCACACCCTCTCCTTTTTCAACGTCAGCCAGCTGAAGGAGGGGACGCAGC CAGAAAACTCACAGTTTGACCAGGAGGTTCAGTTCTGCAGGTTTAAGGATTACCGAGAGCCGCCATGGGCCCCGAACCCTTATGAGTTTT CGAAACAGTACTGGTTTATTCTGTCCGCCCGTCTGGCTTTTGTCATAATCTTCCAGAACCTCGTGATGTTCCTGAGCGTCCTCGTGGACT GGATGATTCCAGACATCCCCACGGACATCAGCGACCAGATCAAGAAAGAGAAGAGCTTATTAGTGGATTTCTTCCTGAAAGAGGAGCATG AGAAGCTCAAGCTGATGGATGAGCCGGCTCTGAGGAGCCCAGGAGGTGGGGATCGAAGCAGGAGCCGGGCAGCCAGCTCAGCACCTTCAG GCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCTCTCAGCACACCAATGTGTGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCAG CAGAGACACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGA GGGGGCAGTGTGTAAAAAGAAAGAGCCTGACAGAATGAGTGTAGGAAGGAAGAGAAATGATGCTACATCTCAGAAACTTCAAGCTTAAGT TTCTTTTAGGTCCCCTTTTAAGCTGCATCCTTTTGAGGGATTGGAACCCCACTGGGGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGC ATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAGGAGCACAGCA TCCCCTACTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAATTAAGTTACAAGGCTGA ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA >In-frame_ENST00000550891_ENST00000546188_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(amino acids)=581AA_start in transcript=110_stop in transcript=1855 MLQDEKMAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLEAGKSLPFIYGDIPQGLVAVPLEDF DPYYLTQKDDEDKLTWKDRFPGYLMNFASILFMIALTFSIVFGVIVYRITTAAALSLNKATRSNVRVTVTATAVIINLVVILILDEIYGA VAKWLTKIEVPKTEQTFEERLILKAFLLKFVNAYSPIFYVAFFKGRFVGRPGSYVYVFDGYRMEECAPGGCLMELCIQLSIIMLGKQLIQ NNIFEIGVPKLKKLFRKLKDETEAGETDSAHSKHPEQWDLDYSLEPYTGLTPEYMEMIIQFGFVTLFVASFPLAPVFALLNNVIEVRLDA KKFVTELRRPDAVRTKDIGIWFDILSGIGKFSVISNAFVIAITSDFIPRLVYQYSYSHNGTLHGFVNHTLSFFNVSQLKEGTQPENSQFD QEVQFCRFKDYREPPWAPNPYEFSKQYWFILSARLAFVIIFQNLVMFLSVLVDWMIPDIPTDISDQIKKEKSLLVDFFLKEEHEKLKLMD -------------------------------------------------------------- >In-frame_ENST00000550891_ENST00000356134_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(transcript)=2501nt_BP=404nt GAGACGCGAGTCTGAGAGCCTGCGGGCGGGCGGCGCGCTGCAGGCGAGCGGGCGAGCGGGCGCGCCCTGCAGGGAGCTGACCTGTCCTGG ACGCAGCATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCACCACCAGGCCCTGATAGTTTCAAGCCTTTCA CCCCTGAGTCACTGGCAAACATTGAGAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGTCATCGGGAGGACG ATGAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAGCAGGGAAGAGTTTGCCTTTCATCTACGGGGACATCCCCCAAGGCCTGGTTG CAGTTCCCCTGGAGGACTTTGACCCATACTATTTGACGCAGAAAGATGATGAAGATAAACTGACCTGGAAGGATCGTTTCCCAGGTTACC TGATGAACTTTGCCTCCATCTTATTCATGATTGCCCTGACATTCTCAATCGTCTTTGGGGTGATAGTGTATCGAATAACAACTGCAGCCG CTCTGTCTCTCAATAAGGCTACACGCTCCAATGTCCGGGTGACAGTGACAGCAACAGCAGTCATCATCAACCTCGTGGTCATCCTCATCC TGGACGAGATCTACGGCGCTGTGGCCAAGTGGCTCACCAAAATTGAGGTTCCGAAAACAGAACAGACTTTTGAAGAGCGCCTGATCCTCA AAGCTTTCTTGCTCAAGTTTGTCAATGCCTACTCCCCCATCTTCTATGTGGCCTTTTTCAAAGGGAGGTTTGTGGGCAGGCCTGGAAGCT ACGTCTATGTATTCGATGGTTACCGCATGGAAGAGTGTGCTCCAGGGGGCTGTCTCATGGAGCTCTGCATTCAGCTCAGCATCATCATGT TGGGGAAGCAGTTGATCCAGAACAACATCTTTGAGATTGGAGTCCCGAAGCTAAAGAAACTATTTCGAAAGCTGAAAGATGAGACCGAAG CTGGAGAAACTGACTCTGCCCATTCGAAACATCCAGAGCAGTGGGACCTAGACTACAGCTTGGAACCATACACAGGACTGACTCCGGAGT ACATGGAAATGATCATCCAGTTTGGTTTTGTCACCCTCTTCGTGGCCTCCTTTCCCCTGGCACCTGTGTTTGCCCTCCTCAACAACGTCA TTGAAGTGCGGCTCGATGCAAAGAAGTTTGTTACAGAGCTGAGACGGCCGGATGCTGTAAGAACCAAAGATATCGGAATCTGGTTTGACA TTCTCTCTGGAATTGGCAAGTTCTCTGTTATCAGCAACGCTTTTGTCATTGCGATCACCTCCGACTTTATCCCCCGCCTGGTGTACCAGT ACTCCTACAGTCACAATGGGACTCTGCACGGCTTTGTCAACCACACCCTCTCCTTTTTCAACGTCAGCCAGCTGAAGGAGGGGACGCAGC CAGAAAACTCACAGTTTGACCAGGAGGTTCAGTTCTGCAGGTTTAAGGATTACCGAGAGCCGCCATGGGCCCCGAACCCTTATGAGTTTT CGAAACAGTACTGGTTTATTCTGTCCGCCCGTCTGGCTTTTGTCATAATCTTCCAGAACCTCGTGATGTTCCTGAGCGTCCTCGTGGACT GGATGATTCCAGACATCCCCACGGACATCAGCGACCAGATCAAGAAAGAGAAGAGCTTATTAGTGGATTTCTTCCTGAAAGAGGAGCATG AGAAGCTCAAGCTGATGGATGAGCCGGCTCTGAGGAGCCCAGGAGGTGGGGATCGAAGCAGGAGCCGGGCAGCCAGCTCAGCACCTTCAG GCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCTCTCAGCACACCAATGTGTGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCAG CAGAGACACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGA GGGGGCAGTGTGTAAAAAGAAAGAGCCTGACAGAATGAGTGTAGGAAGGAAGAGAAATGATGCTACATCTCAGAAACTTCAAGCTTAAGT TTCTTTTAGGTCCCCTTTTAAGCTGCATCCTTTTGAGGGATTGGAACCCCACTGGGGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGC ATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAGGAGCACAGCA TCCCCTACTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAATTAAGTTACAAGGCTGA ATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAA >In-frame_ENST00000550891_ENST00000356134_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(amino acids)=581AA_start in transcript=110_stop in transcript=1855 MLQDEKMAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLEAGKSLPFIYGDIPQGLVAVPLEDF DPYYLTQKDDEDKLTWKDRFPGYLMNFASILFMIALTFSIVFGVIVYRITTAAALSLNKATRSNVRVTVTATAVIINLVVILILDEIYGA VAKWLTKIEVPKTEQTFEERLILKAFLLKFVNAYSPIFYVAFFKGRFVGRPGSYVYVFDGYRMEECAPGGCLMELCIQLSIIMLGKQLIQ NNIFEIGVPKLKKLFRKLKDETEAGETDSAHSKHPEQWDLDYSLEPYTGLTPEYMEMIIQFGFVTLFVASFPLAPVFALLNNVIEVRLDA KKFVTELRRPDAVRTKDIGIWFDILSGIGKFSVISNAFVIAITSDFIPRLVYQYSYSHNGTLHGFVNHTLSFFNVSQLKEGTQPENSQFD QEVQFCRFKDYREPPWAPNPYEFSKQYWFILSARLAFVIIFQNLVMFLSVLVDWMIPDIPTDISDQIKKEKSLLVDFFLKEEHEKLKLMD -------------------------------------------------------------- >In-frame_ENST00000354534_ENST00000327087_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(transcript)=2554nt_BP=454nt GAGCGCTCCAAGATGGCGCCCACCGCAGTCCCGCCCGCCGCATCCTCGGCGCCTTTGCAGTCCGGCCGCGCCTCCCGGGCCCCGCGTTAG GGCCGCCGCTGCCTCCCTCGCCGCCGCCGCTGCCAGCTGACCTGTCCTGGACGCAGCATAACTAACGAAGCTGCTGCAGGATGAGAAGAT GGCAGCGCGGCTGCTTGCACCACCAGGCCCTGATAGTTTCAAGCCTTTCACCCCTGAGTCACTGGCAAACATTGAGAGGCGCATTGCTGA GAGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGTCATCGGGAGGACGATGAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAGC AGGGAAGAGTTTGCCTTTCATCTACGGGGACATCCCCCAAGGCCTGGTTGCAGTTCCCCTGGAGGACTTTGACCCATACTATTTGACGCA GAAAGATGATGAAGATAAACTGACCTGGAAGGATCGTTTCCCAGGTTACCTGATGAACTTTGCCTCCATCTTATTCATGATTGCCCTGAC ATTCTCAATCGTCTTTGGGGTGATAGTGTATCGAATAACAACTGCAGCCGCTCTGTCTCTCAATAAGGCTACACGCTCCAATGTCCGGGT GACAGTGACAGCAACAGCAGTCATCATCAACCTCGTGGTCATCCTCATCCTGGACGAGATCTACGGCGCTGTGGCCAAGTGGCTCACCAA AATTGAGGTTCCGAAAACAGAACAGACTTTTGAAGAGCGCCTGATCCTCAAAGCTTTCTTGCTCAAGTTTGTCAATGCCTACTCCCCCAT CTTCTATGTGGCCTTTTTCAAAGGGAGGTTTGTGGGCAGGCCTGGAAGCTACGTCTATGTATTCGATGGTTACCGCATGGAAGAGTGTGC TCCAGGGGGCTGTCTCATGGAGCTCTGCATTCAGCTCAGCATCATCATGTTGGGGAAGCAGTTGATCCAGAACAACATCTTTGAGATTGG AGTCCCGAAGCTAAAGAAACTATTTCGAAAGCTGAAAGATGAGACCGAAGCTGGAGAAACTGACTCTGCCCATTCGAAACATCCAGAGCA GTGGGACCTAGACTACAGCTTGGAACCATACACAGGACTGACTCCGGAGTACATGGAAATGATCATCCAGTTTGGTTTTGTCACCCTCTT CGTGGCCTCCTTTCCCCTGGCACCTGTGTTTGCCCTCCTCAACAACGTCATTGAAGTGCGGCTCGATGCAAAGAAGTTTGTTACAGAGCT GAGACGGCCGGATGCTGTAAGAACCAAAGATATCGGAATCTGGTTTGACATTCTCTCTGGAATTGGCAAGTTCTCTGTTATCAGCAACGC TTTTGTCATTGCGATCACCTCCGACTTTATCCCCCGCCTGGTGTACCAGTACTCCTACAGTCACAATGGGACTCTGCACGGCTTTGTCAA CCACACCCTCTCCTTTTTCAACGTCAGCCAGCTGAAGGAGGGGACGCAGCCAGAAAACTCACAGTTTGACCAGGAGGTTCAGTTCTGCAG GTTTAAGGATTACCGAGAGCCGCCATGGGCCCCGAACCCTTATGAGTTTTCGAAACAGTACTGGTTTATTCTGTCCGCCCGTCTGGCTTT TGTCATAATCTTCCAGAACCTCGTGATGTTCCTGAGCGTCCTCGTGGACTGGATGATTCCAGACATCCCCACGGACATCAGCGACCAGAT CAAGAAAGAGAAGAGCTTATTAGTGGATTTCTTCCTGAAAGAGGAGCATGAGAAGCTCAAGCTGATGGATGAGCCGGCTCTGAGGAGCCC AGGAGGTGGGGATCGAAGCAGGAGCCGGGCAGCCAGCTCAGCACCTTCAGGCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCTCTCA GCACACCAATGTGTGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCTACACCCA CATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAGGGGGCAGTGTGTAAAAAGAAAGAGCCTGACAGAATGAGT GTAGGAAGGAAGAGAAATGATGCTACATCTCAGAAACTTCAAGCTTAAGTTTCTTTTAGGTCCCCTTTTAAGCTGCATCCTTTTGAGGGA TTGGAACCCCACTGGGGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACCAT CATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAGGAGCACAGCATCCCCTACTTACTATCACTACAAGAAAACTGAGTCACTTG CAGTGGGGCTGCCACAGTCTCAGCAGATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTC CAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAATGCAGATAACCATCATTTTATGAAAGTTCAGATTTAAAAT >In-frame_ENST00000354534_ENST00000327087_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(amino acids)=581AA_start in transcript=160_stop in transcript=1905 MLQDEKMAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLEAGKSLPFIYGDIPQGLVAVPLEDF DPYYLTQKDDEDKLTWKDRFPGYLMNFASILFMIALTFSIVFGVIVYRITTAAALSLNKATRSNVRVTVTATAVIINLVVILILDEIYGA VAKWLTKIEVPKTEQTFEERLILKAFLLKFVNAYSPIFYVAFFKGRFVGRPGSYVYVFDGYRMEECAPGGCLMELCIQLSIIMLGKQLIQ NNIFEIGVPKLKKLFRKLKDETEAGETDSAHSKHPEQWDLDYSLEPYTGLTPEYMEMIIQFGFVTLFVASFPLAPVFALLNNVIEVRLDA KKFVTELRRPDAVRTKDIGIWFDILSGIGKFSVISNAFVIAITSDFIPRLVYQYSYSHNGTLHGFVNHTLSFFNVSQLKEGTQPENSQFD QEVQFCRFKDYREPPWAPNPYEFSKQYWFILSARLAFVIIFQNLVMFLSVLVDWMIPDIPTDISDQIKKEKSLLVDFFLKEEHEKLKLMD -------------------------------------------------------------- >In-frame_ENST00000354534_ENST00000546188_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(transcript)=2551nt_BP=454nt GAGCGCTCCAAGATGGCGCCCACCGCAGTCCCGCCCGCCGCATCCTCGGCGCCTTTGCAGTCCGGCCGCGCCTCCCGGGCCCCGCGTTAG GGCCGCCGCTGCCTCCCTCGCCGCCGCCGCTGCCAGCTGACCTGTCCTGGACGCAGCATAACTAACGAAGCTGCTGCAGGATGAGAAGAT GGCAGCGCGGCTGCTTGCACCACCAGGCCCTGATAGTTTCAAGCCTTTCACCCCTGAGTCACTGGCAAACATTGAGAGGCGCATTGCTGA GAGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGTCATCGGGAGGACGATGAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAGC AGGGAAGAGTTTGCCTTTCATCTACGGGGACATCCCCCAAGGCCTGGTTGCAGTTCCCCTGGAGGACTTTGACCCATACTATTTGACGCA GAAAGATGATGAAGATAAACTGACCTGGAAGGATCGTTTCCCAGGTTACCTGATGAACTTTGCCTCCATCTTATTCATGATTGCCCTGAC ATTCTCAATCGTCTTTGGGGTGATAGTGTATCGAATAACAACTGCAGCCGCTCTGTCTCTCAATAAGGCTACACGCTCCAATGTCCGGGT GACAGTGACAGCAACAGCAGTCATCATCAACCTCGTGGTCATCCTCATCCTGGACGAGATCTACGGCGCTGTGGCCAAGTGGCTCACCAA AATTGAGGTTCCGAAAACAGAACAGACTTTTGAAGAGCGCCTGATCCTCAAAGCTTTCTTGCTCAAGTTTGTCAATGCCTACTCCCCCAT CTTCTATGTGGCCTTTTTCAAAGGGAGGTTTGTGGGCAGGCCTGGAAGCTACGTCTATGTATTCGATGGTTACCGCATGGAAGAGTGTGC TCCAGGGGGCTGTCTCATGGAGCTCTGCATTCAGCTCAGCATCATCATGTTGGGGAAGCAGTTGATCCAGAACAACATCTTTGAGATTGG AGTCCCGAAGCTAAAGAAACTATTTCGAAAGCTGAAAGATGAGACCGAAGCTGGAGAAACTGACTCTGCCCATTCGAAACATCCAGAGCA GTGGGACCTAGACTACAGCTTGGAACCATACACAGGACTGACTCCGGAGTACATGGAAATGATCATCCAGTTTGGTTTTGTCACCCTCTT CGTGGCCTCCTTTCCCCTGGCACCTGTGTTTGCCCTCCTCAACAACGTCATTGAAGTGCGGCTCGATGCAAAGAAGTTTGTTACAGAGCT GAGACGGCCGGATGCTGTAAGAACCAAAGATATCGGAATCTGGTTTGACATTCTCTCTGGAATTGGCAAGTTCTCTGTTATCAGCAACGC TTTTGTCATTGCGATCACCTCCGACTTTATCCCCCGCCTGGTGTACCAGTACTCCTACAGTCACAATGGGACTCTGCACGGCTTTGTCAA CCACACCCTCTCCTTTTTCAACGTCAGCCAGCTGAAGGAGGGGACGCAGCCAGAAAACTCACAGTTTGACCAGGAGGTTCAGTTCTGCAG GTTTAAGGATTACCGAGAGCCGCCATGGGCCCCGAACCCTTATGAGTTTTCGAAACAGTACTGGTTTATTCTGTCCGCCCGTCTGGCTTT TGTCATAATCTTCCAGAACCTCGTGATGTTCCTGAGCGTCCTCGTGGACTGGATGATTCCAGACATCCCCACGGACATCAGCGACCAGAT CAAGAAAGAGAAGAGCTTATTAGTGGATTTCTTCCTGAAAGAGGAGCATGAGAAGCTCAAGCTGATGGATGAGCCGGCTCTGAGGAGCCC AGGAGGTGGGGATCGAAGCAGGAGCCGGGCAGCCAGCTCAGCACCTTCAGGCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCTCTCA GCACACCAATGTGTGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCTACACCCA CATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAGGGGGCAGTGTGTAAAAAGAAAGAGCCTGACAGAATGAGT GTAGGAAGGAAGAGAAATGATGCTACATCTCAGAAACTTCAAGCTTAAGTTTCTTTTAGGTCCCCTTTTAAGCTGCATCCTTTTGAGGGA TTGGAACCCCACTGGGGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACCAT CATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAGGAGCACAGCATCCCCTACTTACTATCACTACAAGAAAACTGAGTCACTTG CAGTGGGGCTGCCACAGTCTCAGCAGATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTC CAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAATGCAGATAACCATCATTTTATGAAAGTTCAGATTTAAAAT >In-frame_ENST00000354534_ENST00000546188_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(amino acids)=581AA_start in transcript=160_stop in transcript=1905 MLQDEKMAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLEAGKSLPFIYGDIPQGLVAVPLEDF DPYYLTQKDDEDKLTWKDRFPGYLMNFASILFMIALTFSIVFGVIVYRITTAAALSLNKATRSNVRVTVTATAVIINLVVILILDEIYGA VAKWLTKIEVPKTEQTFEERLILKAFLLKFVNAYSPIFYVAFFKGRFVGRPGSYVYVFDGYRMEECAPGGCLMELCIQLSIIMLGKQLIQ NNIFEIGVPKLKKLFRKLKDETEAGETDSAHSKHPEQWDLDYSLEPYTGLTPEYMEMIIQFGFVTLFVASFPLAPVFALLNNVIEVRLDA KKFVTELRRPDAVRTKDIGIWFDILSGIGKFSVISNAFVIAITSDFIPRLVYQYSYSHNGTLHGFVNHTLSFFNVSQLKEGTQPENSQFD QEVQFCRFKDYREPPWAPNPYEFSKQYWFILSARLAFVIIFQNLVMFLSVLVDWMIPDIPTDISDQIKKEKSLLVDFFLKEEHEKLKLMD -------------------------------------------------------------- >In-frame_ENST00000354534_ENST00000356134_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(transcript)=2551nt_BP=454nt GAGCGCTCCAAGATGGCGCCCACCGCAGTCCCGCCCGCCGCATCCTCGGCGCCTTTGCAGTCCGGCCGCGCCTCCCGGGCCCCGCGTTAG GGCCGCCGCTGCCTCCCTCGCCGCCGCCGCTGCCAGCTGACCTGTCCTGGACGCAGCATAACTAACGAAGCTGCTGCAGGATGAGAAGAT GGCAGCGCGGCTGCTTGCACCACCAGGCCCTGATAGTTTCAAGCCTTTCACCCCTGAGTCACTGGCAAACATTGAGAGGCGCATTGCTGA GAGCAAGCTCAAGAAACCACCAAAGGCCGATGGCAGTCATCGGGAGGACGATGAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAGC AGGGAAGAGTTTGCCTTTCATCTACGGGGACATCCCCCAAGGCCTGGTTGCAGTTCCCCTGGAGGACTTTGACCCATACTATTTGACGCA GAAAGATGATGAAGATAAACTGACCTGGAAGGATCGTTTCCCAGGTTACCTGATGAACTTTGCCTCCATCTTATTCATGATTGCCCTGAC ATTCTCAATCGTCTTTGGGGTGATAGTGTATCGAATAACAACTGCAGCCGCTCTGTCTCTCAATAAGGCTACACGCTCCAATGTCCGGGT GACAGTGACAGCAACAGCAGTCATCATCAACCTCGTGGTCATCCTCATCCTGGACGAGATCTACGGCGCTGTGGCCAAGTGGCTCACCAA AATTGAGGTTCCGAAAACAGAACAGACTTTTGAAGAGCGCCTGATCCTCAAAGCTTTCTTGCTCAAGTTTGTCAATGCCTACTCCCCCAT CTTCTATGTGGCCTTTTTCAAAGGGAGGTTTGTGGGCAGGCCTGGAAGCTACGTCTATGTATTCGATGGTTACCGCATGGAAGAGTGTGC TCCAGGGGGCTGTCTCATGGAGCTCTGCATTCAGCTCAGCATCATCATGTTGGGGAAGCAGTTGATCCAGAACAACATCTTTGAGATTGG AGTCCCGAAGCTAAAGAAACTATTTCGAAAGCTGAAAGATGAGACCGAAGCTGGAGAAACTGACTCTGCCCATTCGAAACATCCAGAGCA GTGGGACCTAGACTACAGCTTGGAACCATACACAGGACTGACTCCGGAGTACATGGAAATGATCATCCAGTTTGGTTTTGTCACCCTCTT CGTGGCCTCCTTTCCCCTGGCACCTGTGTTTGCCCTCCTCAACAACGTCATTGAAGTGCGGCTCGATGCAAAGAAGTTTGTTACAGAGCT GAGACGGCCGGATGCTGTAAGAACCAAAGATATCGGAATCTGGTTTGACATTCTCTCTGGAATTGGCAAGTTCTCTGTTATCAGCAACGC TTTTGTCATTGCGATCACCTCCGACTTTATCCCCCGCCTGGTGTACCAGTACTCCTACAGTCACAATGGGACTCTGCACGGCTTTGTCAA CCACACCCTCTCCTTTTTCAACGTCAGCCAGCTGAAGGAGGGGACGCAGCCAGAAAACTCACAGTTTGACCAGGAGGTTCAGTTCTGCAG GTTTAAGGATTACCGAGAGCCGCCATGGGCCCCGAACCCTTATGAGTTTTCGAAACAGTACTGGTTTATTCTGTCCGCCCGTCTGGCTTT TGTCATAATCTTCCAGAACCTCGTGATGTTCCTGAGCGTCCTCGTGGACTGGATGATTCCAGACATCCCCACGGACATCAGCGACCAGAT CAAGAAAGAGAAGAGCTTATTAGTGGATTTCTTCCTGAAAGAGGAGCATGAGAAGCTCAAGCTGATGGATGAGCCGGCTCTGAGGAGCCC AGGAGGTGGGGATCGAAGCAGGAGCCGGGCAGCCAGCTCAGCACCTTCAGGCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCTCTCA GCACACCAATGTGTGAGCAGTTCAGCCTGCAGCAGAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCTACACCCA CATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTTGATGGGGTCTTGAAGAGGGGGCAGTGTGTAAAAAGAAAGAGCCTGACAGAATGAGT GTAGGAAGGAAGAGAAATGATGCTACATCTCAGAAACTTCAAGCTTAAGTTTCTTTTAGGTCCCCTTTTAAGCTGCATCCTTTTGAGGGA TTGGAACCCCACTGGGGTCTCTCCACCCCAGAGTCTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACCAT CATTTCTGACTTTGACCAGCTGTAAGAGAAATGCAGTCAGGAGCACAGCATCCCCTACTTACTATCACTACAAGAAAACTGAGTCACTTG CAGTGGGGCTGCCACAGTCTCAGCAGATGCAAATTAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTC CAAACCTGGGCTTGTCTCCACTTCACGTCACAAAAACGTTTGGAGCTAAATGCAGATAACCATCATTTTATGAAAGTTCAGATTTAAAAT >In-frame_ENST00000354534_ENST00000356134_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(amino acids)=581AA_start in transcript=160_stop in transcript=1905 MLQDEKMAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLEAGKSLPFIYGDIPQGLVAVPLEDF DPYYLTQKDDEDKLTWKDRFPGYLMNFASILFMIALTFSIVFGVIVYRITTAAALSLNKATRSNVRVTVTATAVIINLVVILILDEIYGA VAKWLTKIEVPKTEQTFEERLILKAFLLKFVNAYSPIFYVAFFKGRFVGRPGSYVYVFDGYRMEECAPGGCLMELCIQLSIIMLGKQLIQ NNIFEIGVPKLKKLFRKLKDETEAGETDSAHSKHPEQWDLDYSLEPYTGLTPEYMEMIIQFGFVTLFVASFPLAPVFALLNNVIEVRLDA KKFVTELRRPDAVRTKDIGIWFDILSGIGKFSVISNAFVIAITSDFIPRLVYQYSYSHNGTLHGFVNHTLSFFNVSQLKEGTQPENSQFD QEVQFCRFKDYREPPWAPNPYEFSKQYWFILSARLAFVIIFQNLVMFLSVLVDWMIPDIPTDISDQIKKEKSLLVDFFLKEEHEKLKLMD -------------------------------------------------------------- >In-frame_ENST00000545061_ENST00000327087_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(transcript)=2430nt_BP=330nt AGCTGACCTGTCCTGGACGCAGCATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCACCACCAGGCCCTGAT AGTTTCAAGCCTTTCACCCCTGAGTCACTGGCAAACATTGAGAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGC AGTCATCGGGAGGACGATGAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAGCAGGGAAGAGTTTGCCTTTCATCTACGGGGACATC CCCCAAGGCCTGGTTGCAGTTCCCCTGGAGGACTTTGACCCATACTATTTGACGCAGAAAGATGATGAAGATAAACTGACCTGGAAGGAT CGTTTCCCAGGTTACCTGATGAACTTTGCCTCCATCTTATTCATGATTGCCCTGACATTCTCAATCGTCTTTGGGGTGATAGTGTATCGA ATAACAACTGCAGCCGCTCTGTCTCTCAATAAGGCTACACGCTCCAATGTCCGGGTGACAGTGACAGCAACAGCAGTCATCATCAACCTC GTGGTCATCCTCATCCTGGACGAGATCTACGGCGCTGTGGCCAAGTGGCTCACCAAAATTGAGGTTCCGAAAACAGAACAGACTTTTGAA GAGCGCCTGATCCTCAAAGCTTTCTTGCTCAAGTTTGTCAATGCCTACTCCCCCATCTTCTATGTGGCCTTTTTCAAAGGGAGGTTTGTG GGCAGGCCTGGAAGCTACGTCTATGTATTCGATGGTTACCGCATGGAAGAGTGTGCTCCAGGGGGCTGTCTCATGGAGCTCTGCATTCAG CTCAGCATCATCATGTTGGGGAAGCAGTTGATCCAGAACAACATCTTTGAGATTGGAGTCCCGAAGCTAAAGAAACTATTTCGAAAGCTG AAAGATGAGACCGAAGCTGGAGAAACTGACTCTGCCCATTCGAAACATCCAGAGCAGTGGGACCTAGACTACAGCTTGGAACCATACACA GGACTGACTCCGGAGTACATGGAAATGATCATCCAGTTTGGTTTTGTCACCCTCTTCGTGGCCTCCTTTCCCCTGGCACCTGTGTTTGCC CTCCTCAACAACGTCATTGAAGTGCGGCTCGATGCAAAGAAGTTTGTTACAGAGCTGAGACGGCCGGATGCTGTAAGAACCAAAGATATC GGAATCTGGTTTGACATTCTCTCTGGAATTGGCAAGTTCTCTGTTATCAGCAACGCTTTTGTCATTGCGATCACCTCCGACTTTATCCCC CGCCTGGTGTACCAGTACTCCTACAGTCACAATGGGACTCTGCACGGCTTTGTCAACCACACCCTCTCCTTTTTCAACGTCAGCCAGCTG AAGGAGGGGACGCAGCCAGAAAACTCACAGTTTGACCAGGAGGTTCAGTTCTGCAGGTTTAAGGATTACCGAGAGCCGCCATGGGCCCCG AACCCTTATGAGTTTTCGAAACAGTACTGGTTTATTCTGTCCGCCCGTCTGGCTTTTGTCATAATCTTCCAGAACCTCGTGATGTTCCTG AGCGTCCTCGTGGACTGGATGATTCCAGACATCCCCACGGACATCAGCGACCAGATCAAGAAAGAGAAGAGCTTATTAGTGGATTTCTTC CTGAAAGAGGAGCATGAGAAGCTCAAGCTGATGGATGAGCCGGCTCTGAGGAGCCCAGGAGGTGGGGATCGAAGCAGGAGCCGGGCAGCC AGCTCAGCACCTTCAGGCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCTCTCAGCACACCAATGTGTGAGCAGTTCAGCCTGCAGCA GAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTT GATGGGGTCTTGAAGAGGGGGCAGTGTGTAAAAAGAAAGAGCCTGACAGAATGAGTGTAGGAAGGAAGAGAAATGATGCTACATCTCAGA AACTTCAAGCTTAAGTTTCTTTTAGGTCCCCTTTTAAGCTGCATCCTTTTGAGGGATTGGAACCCCACTGGGGTCTCTCCACCCCAGAGT CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGC AGTCAGGAGCACAGCATCCCCTACTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAAT TAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAA AACGTTTGGAGCTAAATGCAGATAACCATCATTTTATGAAAGTTCAGATTTAAAATAATAAAATAAATGGACACATTCTTTATAAAGATG >In-frame_ENST00000545061_ENST00000327087_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(amino acids)=581AA_start in transcript=36_stop in transcript=1781 MLQDEKMAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLEAGKSLPFIYGDIPQGLVAVPLEDF DPYYLTQKDDEDKLTWKDRFPGYLMNFASILFMIALTFSIVFGVIVYRITTAAALSLNKATRSNVRVTVTATAVIINLVVILILDEIYGA VAKWLTKIEVPKTEQTFEERLILKAFLLKFVNAYSPIFYVAFFKGRFVGRPGSYVYVFDGYRMEECAPGGCLMELCIQLSIIMLGKQLIQ NNIFEIGVPKLKKLFRKLKDETEAGETDSAHSKHPEQWDLDYSLEPYTGLTPEYMEMIIQFGFVTLFVASFPLAPVFALLNNVIEVRLDA KKFVTELRRPDAVRTKDIGIWFDILSGIGKFSVISNAFVIAITSDFIPRLVYQYSYSHNGTLHGFVNHTLSFFNVSQLKEGTQPENSQFD QEVQFCRFKDYREPPWAPNPYEFSKQYWFILSARLAFVIIFQNLVMFLSVLVDWMIPDIPTDISDQIKKEKSLLVDFFLKEEHEKLKLMD -------------------------------------------------------------- >In-frame_ENST00000545061_ENST00000546188_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(transcript)=2427nt_BP=330nt AGCTGACCTGTCCTGGACGCAGCATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCACCACCAGGCCCTGAT AGTTTCAAGCCTTTCACCCCTGAGTCACTGGCAAACATTGAGAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGC AGTCATCGGGAGGACGATGAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAGCAGGGAAGAGTTTGCCTTTCATCTACGGGGACATC CCCCAAGGCCTGGTTGCAGTTCCCCTGGAGGACTTTGACCCATACTATTTGACGCAGAAAGATGATGAAGATAAACTGACCTGGAAGGAT CGTTTCCCAGGTTACCTGATGAACTTTGCCTCCATCTTATTCATGATTGCCCTGACATTCTCAATCGTCTTTGGGGTGATAGTGTATCGA ATAACAACTGCAGCCGCTCTGTCTCTCAATAAGGCTACACGCTCCAATGTCCGGGTGACAGTGACAGCAACAGCAGTCATCATCAACCTC GTGGTCATCCTCATCCTGGACGAGATCTACGGCGCTGTGGCCAAGTGGCTCACCAAAATTGAGGTTCCGAAAACAGAACAGACTTTTGAA GAGCGCCTGATCCTCAAAGCTTTCTTGCTCAAGTTTGTCAATGCCTACTCCCCCATCTTCTATGTGGCCTTTTTCAAAGGGAGGTTTGTG GGCAGGCCTGGAAGCTACGTCTATGTATTCGATGGTTACCGCATGGAAGAGTGTGCTCCAGGGGGCTGTCTCATGGAGCTCTGCATTCAG CTCAGCATCATCATGTTGGGGAAGCAGTTGATCCAGAACAACATCTTTGAGATTGGAGTCCCGAAGCTAAAGAAACTATTTCGAAAGCTG AAAGATGAGACCGAAGCTGGAGAAACTGACTCTGCCCATTCGAAACATCCAGAGCAGTGGGACCTAGACTACAGCTTGGAACCATACACA GGACTGACTCCGGAGTACATGGAAATGATCATCCAGTTTGGTTTTGTCACCCTCTTCGTGGCCTCCTTTCCCCTGGCACCTGTGTTTGCC CTCCTCAACAACGTCATTGAAGTGCGGCTCGATGCAAAGAAGTTTGTTACAGAGCTGAGACGGCCGGATGCTGTAAGAACCAAAGATATC GGAATCTGGTTTGACATTCTCTCTGGAATTGGCAAGTTCTCTGTTATCAGCAACGCTTTTGTCATTGCGATCACCTCCGACTTTATCCCC CGCCTGGTGTACCAGTACTCCTACAGTCACAATGGGACTCTGCACGGCTTTGTCAACCACACCCTCTCCTTTTTCAACGTCAGCCAGCTG AAGGAGGGGACGCAGCCAGAAAACTCACAGTTTGACCAGGAGGTTCAGTTCTGCAGGTTTAAGGATTACCGAGAGCCGCCATGGGCCCCG AACCCTTATGAGTTTTCGAAACAGTACTGGTTTATTCTGTCCGCCCGTCTGGCTTTTGTCATAATCTTCCAGAACCTCGTGATGTTCCTG AGCGTCCTCGTGGACTGGATGATTCCAGACATCCCCACGGACATCAGCGACCAGATCAAGAAAGAGAAGAGCTTATTAGTGGATTTCTTC CTGAAAGAGGAGCATGAGAAGCTCAAGCTGATGGATGAGCCGGCTCTGAGGAGCCCAGGAGGTGGGGATCGAAGCAGGAGCCGGGCAGCC AGCTCAGCACCTTCAGGCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCTCTCAGCACACCAATGTGTGAGCAGTTCAGCCTGCAGCA GAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTT GATGGGGTCTTGAAGAGGGGGCAGTGTGTAAAAAGAAAGAGCCTGACAGAATGAGTGTAGGAAGGAAGAGAAATGATGCTACATCTCAGA AACTTCAAGCTTAAGTTTCTTTTAGGTCCCCTTTTAAGCTGCATCCTTTTGAGGGATTGGAACCCCACTGGGGTCTCTCCACCCCAGAGT CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGC AGTCAGGAGCACAGCATCCCCTACTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAAT TAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAA >In-frame_ENST00000545061_ENST00000546188_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(amino acids)=581AA_start in transcript=36_stop in transcript=1781 MLQDEKMAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLEAGKSLPFIYGDIPQGLVAVPLEDF DPYYLTQKDDEDKLTWKDRFPGYLMNFASILFMIALTFSIVFGVIVYRITTAAALSLNKATRSNVRVTVTATAVIINLVVILILDEIYGA VAKWLTKIEVPKTEQTFEERLILKAFLLKFVNAYSPIFYVAFFKGRFVGRPGSYVYVFDGYRMEECAPGGCLMELCIQLSIIMLGKQLIQ NNIFEIGVPKLKKLFRKLKDETEAGETDSAHSKHPEQWDLDYSLEPYTGLTPEYMEMIIQFGFVTLFVASFPLAPVFALLNNVIEVRLDA KKFVTELRRPDAVRTKDIGIWFDILSGIGKFSVISNAFVIAITSDFIPRLVYQYSYSHNGTLHGFVNHTLSFFNVSQLKEGTQPENSQFD QEVQFCRFKDYREPPWAPNPYEFSKQYWFILSARLAFVIIFQNLVMFLSVLVDWMIPDIPTDISDQIKKEKSLLVDFFLKEEHEKLKLMD -------------------------------------------------------------- >In-frame_ENST00000545061_ENST00000356134_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(transcript)=2427nt_BP=330nt AGCTGACCTGTCCTGGACGCAGCATAACTAACGAAGCTGCTGCAGGATGAGAAGATGGCAGCGCGGCTGCTTGCACCACCAGGCCCTGAT AGTTTCAAGCCTTTCACCCCTGAGTCACTGGCAAACATTGAGAGGCGCATTGCTGAGAGCAAGCTCAAGAAACCACCAAAGGCCGATGGC AGTCATCGGGAGGACGATGAGGACAGCAAGCCCAAGCCAAACAGCGACCTGGAAGCAGGGAAGAGTTTGCCTTTCATCTACGGGGACATC CCCCAAGGCCTGGTTGCAGTTCCCCTGGAGGACTTTGACCCATACTATTTGACGCAGAAAGATGATGAAGATAAACTGACCTGGAAGGAT CGTTTCCCAGGTTACCTGATGAACTTTGCCTCCATCTTATTCATGATTGCCCTGACATTCTCAATCGTCTTTGGGGTGATAGTGTATCGA ATAACAACTGCAGCCGCTCTGTCTCTCAATAAGGCTACACGCTCCAATGTCCGGGTGACAGTGACAGCAACAGCAGTCATCATCAACCTC GTGGTCATCCTCATCCTGGACGAGATCTACGGCGCTGTGGCCAAGTGGCTCACCAAAATTGAGGTTCCGAAAACAGAACAGACTTTTGAA GAGCGCCTGATCCTCAAAGCTTTCTTGCTCAAGTTTGTCAATGCCTACTCCCCCATCTTCTATGTGGCCTTTTTCAAAGGGAGGTTTGTG GGCAGGCCTGGAAGCTACGTCTATGTATTCGATGGTTACCGCATGGAAGAGTGTGCTCCAGGGGGCTGTCTCATGGAGCTCTGCATTCAG CTCAGCATCATCATGTTGGGGAAGCAGTTGATCCAGAACAACATCTTTGAGATTGGAGTCCCGAAGCTAAAGAAACTATTTCGAAAGCTG AAAGATGAGACCGAAGCTGGAGAAACTGACTCTGCCCATTCGAAACATCCAGAGCAGTGGGACCTAGACTACAGCTTGGAACCATACACA GGACTGACTCCGGAGTACATGGAAATGATCATCCAGTTTGGTTTTGTCACCCTCTTCGTGGCCTCCTTTCCCCTGGCACCTGTGTTTGCC CTCCTCAACAACGTCATTGAAGTGCGGCTCGATGCAAAGAAGTTTGTTACAGAGCTGAGACGGCCGGATGCTGTAAGAACCAAAGATATC GGAATCTGGTTTGACATTCTCTCTGGAATTGGCAAGTTCTCTGTTATCAGCAACGCTTTTGTCATTGCGATCACCTCCGACTTTATCCCC CGCCTGGTGTACCAGTACTCCTACAGTCACAATGGGACTCTGCACGGCTTTGTCAACCACACCCTCTCCTTTTTCAACGTCAGCCAGCTG AAGGAGGGGACGCAGCCAGAAAACTCACAGTTTGACCAGGAGGTTCAGTTCTGCAGGTTTAAGGATTACCGAGAGCCGCCATGGGCCCCG AACCCTTATGAGTTTTCGAAACAGTACTGGTTTATTCTGTCCGCCCGTCTGGCTTTTGTCATAATCTTCCAGAACCTCGTGATGTTCCTG AGCGTCCTCGTGGACTGGATGATTCCAGACATCCCCACGGACATCAGCGACCAGATCAAGAAAGAGAAGAGCTTATTAGTGGATTTCTTC CTGAAAGAGGAGCATGAGAAGCTCAAGCTGATGGATGAGCCGGCTCTGAGGAGCCCAGGAGGTGGGGATCGAAGCAGGAGCCGGGCAGCC AGCTCAGCACCTTCAGGCCAAAGCCAGCTGGGCAGCATGATGTCGTCAGGCTCTCAGCACACCAATGTGTGAGCAGTTCAGCCTGCAGCA GAGGAGGGCACGGCAGCAGAGACACGCACATGCACGTAAGCATGTTCCTACACCCACATGGCGTGCTGTCTGTCTGCAGGGGCCTGGCTT GATGGGGTCTTGAAGAGGGGGCAGTGTGTAAAAAGAAAGAGCCTGACAGAATGAGTGTAGGAAGGAAGAGAAATGATGCTACATCTCAGA AACTTCAAGCTTAAGTTTCTTTTAGGTCCCCTTTTAAGCTGCATCCTTTTGAGGGATTGGAACCCCACTGGGGTCTCTCCACCCCAGAGT CTCAGGCACCGCGAGCATTCCCATGTACCCTGGGGCACCCTCTTGTACTTCACCATCATTTCTGACTTTGACCAGCTGTAAGAGAAATGC AGTCAGGAGCACAGCATCCCCTACTTACTATCACTACAAGAAAACTGAGTCACTTGCAGTGGGGCTGCCACAGTCTCAGCAGATGCAAAT TAAGTTACAAGGCTGAATGGTGCAGCCGCTGGACCTGATAGTAAGGTGCAAAGGTCCAAACCTGGGCTTGTCTCCACTTCACGTCACAAA >In-frame_ENST00000545061_ENST00000356134_TCGA-3B-A9HL-01A_SCN8A_chr12_52056877_+_ANO2_chr12_5756967_length(amino acids)=581AA_start in transcript=36_stop in transcript=1781 MLQDEKMAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLEAGKSLPFIYGDIPQGLVAVPLEDF DPYYLTQKDDEDKLTWKDRFPGYLMNFASILFMIALTFSIVFGVIVYRITTAAALSLNKATRSNVRVTVTATAVIINLVVILILDEIYGA VAKWLTKIEVPKTEQTFEERLILKAFLLKFVNAYSPIFYVAFFKGRFVGRPGSYVYVFDGYRMEECAPGGCLMELCIQLSIIMLGKQLIQ NNIFEIGVPKLKKLFRKLKDETEAGETDSAHSKHPEQWDLDYSLEPYTGLTPEYMEMIIQFGFVTLFVASFPLAPVFALLNNVIEVRLDA KKFVTELRRPDAVRTKDIGIWFDILSGIGKFSVISNAFVIAITSDFIPRLVYQYSYSHNGTLHGFVNHTLSFFNVSQLKEGTQPENSQFD QEVQFCRFKDYREPPWAPNPYEFSKQYWFILSARLAFVIIFQNLVMFLSVLVDWMIPDIPTDISDQIKKEKSLLVDFFLKEEHEKLKLMD -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for SCN8A-ANO2 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for SCN8A-ANO2 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for SCN8A-ANO2 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | SCN8A | C3281191 | SCN8A-related epilepsy with encephalopathy | 16 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
| Hgene | SCN8A | C0014544 | Epilepsy | 3 | CTD_human;GENOMICS_ENGLAND |
| Hgene | SCN8A | C0005586 | Bipolar Disorder | 2 | PSYGENET |
| Hgene | SCN8A | C0086237 | Epilepsy, Cryptogenic | 2 | CTD_human |
| Hgene | SCN8A | C0236018 | Aura | 2 | CTD_human |
| Hgene | SCN8A | C0751111 | Awakening Epilepsy | 2 | CTD_human |
| Hgene | SCN8A | C3280415 | COGNITIVE IMPAIRMENT WITH OR WITHOUT CEREBELLAR ATAXIA | 2 | CTD_human;GENOMICS_ENGLAND |
| Hgene | SCN8A | C4310728 | SEIZURES, BENIGN FAMILIAL INFANTILE, 5 | 2 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
| Hgene | SCN8A | C0004134 | Ataxia | 1 | CTD_human |
| Hgene | SCN8A | C0007758 | Cerebellar Ataxia | 1 | CTD_human |
| Hgene | SCN8A | C0019372 | Herpesviridae Infections | 1 | CTD_human |
| Hgene | SCN8A | C0020796 | Profound Mental Retardation | 1 | CTD_human |
| Hgene | SCN8A | C0025363 | Mental Retardation, Psychosocial | 1 | CTD_human |
| Hgene | SCN8A | C0027765 | nervous system disorder | 1 | CTD_human |
| Hgene | SCN8A | C0032768 | Postherpetic neuralgia | 1 | CTD_human |
| Hgene | SCN8A | C0037140 | B Virus Infection | 1 | CTD_human |
| Hgene | SCN8A | C0038220 | Status Epilepticus | 1 | CTD_human |
| Hgene | SCN8A | C0040822 | Tremor | 1 | CTD_human |
| Hgene | SCN8A | C0040827 | Saturnine Tremor | 1 | CTD_human |
| Hgene | SCN8A | C0149840 | Senile Tremor | 1 | CTD_human |
| Hgene | SCN8A | C0220669 | Familial benign neonatal epilepsy | 1 | ORPHANET |
| Hgene | SCN8A | C0234162 | Cerebellar Dysmetria | 1 | CTD_human |
| Hgene | SCN8A | C0234357 | Adiadochokinesis | 1 | CTD_human |
| Hgene | SCN8A | C0234370 | Persistent Tremor | 1 | CTD_human |
| Hgene | SCN8A | C0234371 | Continuous Tremor | 1 | CTD_human |
| Hgene | SCN8A | C0234372 | Intermittent Tremor | 1 | CTD_human |
| Hgene | SCN8A | C0234373 | Fine Tremor | 1 | CTD_human |
| Hgene | SCN8A | C0234374 | Coarse Tremor | 1 | CTD_human |
| Hgene | SCN8A | C0234375 | Massive Tremor | 1 | CTD_human |
| Hgene | SCN8A | C0234376 | Action Tremor | 1 | CTD_human |
| Hgene | SCN8A | C0234377 | Passive Tremor | 1 | CTD_human |
| Hgene | SCN8A | C0234378 | Static Tremor | 1 | CTD_human |
| Hgene | SCN8A | C0234379 | Resting Tremor | 1 | CTD_human |
| Hgene | SCN8A | C0234381 | Darkness Tremor | 1 | CTD_human |
| Hgene | SCN8A | C0235078 | Tremor, Perioral | 1 | CTD_human |
| Hgene | SCN8A | C0235081 | Tremor, Limb | 1 | CTD_human |
| Hgene | SCN8A | C0235082 | Tremor, Muscle | 1 | CTD_human |
| Hgene | SCN8A | C0235083 | Nerve Tremors | 1 | CTD_human |
| Hgene | SCN8A | C0235843 | Tremor, Neonatal | 1 | CTD_human |
| Hgene | SCN8A | C0240991 | Ataxia, Sensory | 1 | CTD_human |
| Hgene | SCN8A | C0270823 | Petit mal status | 1 | CTD_human |
| Hgene | SCN8A | C0278161 | Ataxia, Motor | 1 | CTD_human |
| Hgene | SCN8A | C0311335 | Grand Mal Status Epilepticus | 1 | CTD_human |
| Hgene | SCN8A | C0393734 | Complex Partial Status Epilepticus | 1 | CTD_human |
| Hgene | SCN8A | C0427190 | Ataxia, Truncal | 1 | CTD_human |
| Hgene | SCN8A | C0520966 | Abnormal coordination | 1 | CTD_human |
| Hgene | SCN8A | C0750937 | Ataxia, Appendicular | 1 | CTD_human |
| Hgene | SCN8A | C0750940 | Tremor, Rubral | 1 | CTD_human |
| Hgene | SCN8A | C0750994 | Cerebellar Hemiataxia | 1 | CTD_human |
| Hgene | SCN8A | C0751522 | Status Epilepticus, Subclinical | 1 | CTD_human |
| Hgene | SCN8A | C0751523 | Non-Convulsive Status Epilepticus | 1 | CTD_human |
| Hgene | SCN8A | C0751524 | Simple Partial Status Epilepticus | 1 | CTD_human |
| Hgene | SCN8A | C0751564 | Pill Rolling Tremor | 1 | CTD_human |
| Hgene | SCN8A | C0751565 | Tremor, Semirhythmic | 1 | CTD_human |
| Hgene | SCN8A | C0917816 | Mental deficiency | 1 | CTD_human |
| Hgene | SCN8A | C1527384 | Involuntary Quiver | 1 | CTD_human |
| Hgene | SCN8A | C1535926 | Neurodevelopmental Disorders | 1 | CTD_human |
| Hgene | SCN8A | C1865926 | Infantile convulsions and paroxysmal choreoathetosis, familial (disorder) | 1 | ORPHANET |
| Hgene | SCN8A | C3668822 | Hypermetria (finding) | 1 | CTD_human |
| Hgene | SCN8A | C3714756 | Intellectual Disability | 1 | CTD_human;GENOMICS_ENGLAND |
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