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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:SH3KBP1-ZNF92 (FusionGDB2 ID:80929) |
Fusion Gene Summary for SH3KBP1-ZNF92 |
Fusion gene summary |
Fusion gene information | Fusion gene name: SH3KBP1-ZNF92 | Fusion gene ID: 80929 | Hgene | Tgene | Gene symbol | SH3KBP1 | ZNF92 | Gene ID | 30011 | 168374 |
Gene name | SH3 domain containing kinase binding protein 1 | zinc finger protein 92 | |
Synonyms | AGMX2|CD2BP3|CIN85|GIG10|HSB-1|HSB1|IMD61|MIG18 | HEL-203|HPF12|HTF12|TF12 | |
Cytomap | Xp22.12 | 7q11.21 | |
Type of gene | protein-coding | protein-coding | |
Description | SH3 domain-containing kinase-binding protein 1CD2-binding protein 3SH3-domain kinase binding protein 1Src family kinase-binding protein 1c-Cbl-interacting proteincbl-interacting protein of 85 kDahuman Src family kinase-binding protein 1migration-in | zinc finger protein 92epididymis luminal protein 203zinc finger protein HTF12 | |
Modification date | 20200327 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000397821, ENST00000379716, ENST00000379698, ENST00000541422, ENST00000379697, ENST00000477102, | ENST00000328747, ENST00000431504, ENST00000357512, ENST00000450302, | |
Fusion gene scores | * DoF score | 14 X 14 X 5=980 | 3 X 4 X 3=36 |
# samples | 15 | 3 | |
** MAII score | log2(15/980*10)=-2.70781924850669 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/36*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: SH3KBP1 [Title/Abstract] AND ZNF92 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | SH3KBP1(19701941)-ZNF92(64852815), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | SH3KBP1-ZNF92 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. SH3KBP1-ZNF92 seems lost the major protein functional domain in Tgene partner, which is a transcription factor due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across SH3KBP1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across ZNF92 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | SARC | TCGA-IE-A4EJ-01A | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
ChimerDB4 | SARC | TCGA-IE-A4EJ-01A | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
ChimerDB4 | SARC | TCGA-IE-A4EJ-01A | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
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Fusion Gene ORF analysis for SH3KBP1-ZNF92 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000397821 | ENST00000328747 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
5CDS-intron | ENST00000397821 | ENST00000431504 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
5CDS-intron | ENST00000397821 | ENST00000357512 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
5CDS-intron | ENST00000397821 | ENST00000450302 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
intron-3CDS | ENST00000379716 | ENST00000328747 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
intron-intron | ENST00000379716 | ENST00000431504 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
intron-intron | ENST00000379716 | ENST00000357512 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
intron-intron | ENST00000379716 | ENST00000450302 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
In-frame | ENST00000379698 | ENST00000328747 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
5CDS-intron | ENST00000379698 | ENST00000431504 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
5CDS-intron | ENST00000379698 | ENST00000357512 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
5CDS-intron | ENST00000379698 | ENST00000450302 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
intron-3CDS | ENST00000541422 | ENST00000328747 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
intron-intron | ENST00000541422 | ENST00000431504 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
intron-intron | ENST00000541422 | ENST00000357512 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
intron-intron | ENST00000541422 | ENST00000450302 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
In-frame | ENST00000379697 | ENST00000328747 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
5CDS-intron | ENST00000379697 | ENST00000431504 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
5CDS-intron | ENST00000379697 | ENST00000357512 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
5CDS-intron | ENST00000379697 | ENST00000450302 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
intron-3CDS | ENST00000477102 | ENST00000328747 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
intron-intron | ENST00000477102 | ENST00000431504 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
intron-intron | ENST00000477102 | ENST00000357512 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
intron-intron | ENST00000477102 | ENST00000450302 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + |
Frame-shift | ENST00000397821 | ENST00000328747 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
5CDS-5UTR | ENST00000397821 | ENST00000431504 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
5CDS-5UTR | ENST00000397821 | ENST00000357512 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
5CDS-5UTR | ENST00000397821 | ENST00000450302 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
intron-3CDS | ENST00000379716 | ENST00000328747 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
intron-5UTR | ENST00000379716 | ENST00000431504 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
intron-5UTR | ENST00000379716 | ENST00000357512 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
intron-5UTR | ENST00000379716 | ENST00000450302 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
Frame-shift | ENST00000379698 | ENST00000328747 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
5CDS-5UTR | ENST00000379698 | ENST00000431504 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
5CDS-5UTR | ENST00000379698 | ENST00000357512 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
5CDS-5UTR | ENST00000379698 | ENST00000450302 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
intron-3CDS | ENST00000541422 | ENST00000328747 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
intron-5UTR | ENST00000541422 | ENST00000431504 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
intron-5UTR | ENST00000541422 | ENST00000357512 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
intron-5UTR | ENST00000541422 | ENST00000450302 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
Frame-shift | ENST00000379697 | ENST00000328747 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
5CDS-5UTR | ENST00000379697 | ENST00000431504 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
5CDS-5UTR | ENST00000379697 | ENST00000357512 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
5CDS-5UTR | ENST00000379697 | ENST00000450302 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
intron-3CDS | ENST00000477102 | ENST00000328747 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
intron-5UTR | ENST00000477102 | ENST00000431504 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
intron-5UTR | ENST00000477102 | ENST00000357512 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
intron-5UTR | ENST00000477102 | ENST00000450302 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64863254 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000397821 | SH3KBP1 | chrX | 19701941 | - | ENST00000328747 | ZNF92 | chr7 | 64852815 | + | 4025 | 1017 | 291 | 2774 | 827 |
ENST00000379698 | SH3KBP1 | chrX | 19701941 | - | ENST00000328747 | ZNF92 | chr7 | 64852815 | + | 3690 | 682 | 67 | 2439 | 790 |
ENST00000379697 | SH3KBP1 | chrX | 19701941 | - | ENST00000328747 | ZNF92 | chr7 | 64852815 | + | 4015 | 1007 | 149 | 2764 | 871 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000397821 | ENST00000328747 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + | 0.000139861 | 0.99986017 |
ENST00000379698 | ENST00000328747 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + | 0.000524077 | 0.9994759 |
ENST00000379697 | ENST00000328747 | SH3KBP1 | chrX | 19701941 | - | ZNF92 | chr7 | 64852815 | + | 8.97E-05 | 0.99991024 |
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Fusion Genomic Features for SH3KBP1-ZNF92 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
SH3KBP1 | chrX | 19701940 | - | ZNF92 | chr7 | 64852814 | + | 0.005870051 | 0.99413 |
SH3KBP1 | chrX | 19701940 | - | ZNF92 | chr7 | 64863253 | + | 4.94E-06 | 0.9999951 |
SH3KBP1 | chrX | 19701940 | - | ZNF92 | chr7 | 64852814 | + | 0.005870051 | 0.99413 |
SH3KBP1 | chrX | 19701940 | - | ZNF92 | chr7 | 64863253 | + | 4.94E-06 | 0.9999951 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for SH3KBP1-ZNF92 |
Go to FGviewer for the breakpoints of chrX:19701941-chr7:64852815 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | SH3KBP1 | chrX:19701941 | chr7:64852815 | ENST00000379698 | - | 5 | 17 | 1_58 | 205.0 | 629.0 | Domain | SH3 1 |
Hgene | SH3KBP1 | chrX:19701941 | chr7:64852815 | ENST00000379698 | - | 5 | 17 | 98_157 | 205.0 | 629.0 | Domain | SH3 2 |
Hgene | SH3KBP1 | chrX:19701941 | chr7:64852815 | ENST00000397821 | - | 6 | 18 | 1_58 | 242.0 | 666.0 | Domain | SH3 1 |
Hgene | SH3KBP1 | chrX:19701941 | chr7:64852815 | ENST00000397821 | - | 6 | 18 | 98_157 | 242.0 | 666.0 | Domain | SH3 2 |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 4_75 | 1.0 | 587.0 | Domain | KRAB | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 4_75 | 1.0 | 555.0 | Domain | KRAB | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 4_75 | 0 | 518.0 | Domain | KRAB | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 145_167 | 1.0 | 587.0 | Zinc finger | C2H2-type 1%3B degenerate | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 173_195 | 1.0 | 587.0 | Zinc finger | C2H2-type 2%3B degenerate | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 201_223 | 1.0 | 587.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 229_251 | 1.0 | 587.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 257_279 | 1.0 | 587.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 285_307 | 1.0 | 587.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 313_335 | 1.0 | 587.0 | Zinc finger | C2H2-type 7 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 341_363 | 1.0 | 587.0 | Zinc finger | C2H2-type 8 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 369_391 | 1.0 | 587.0 | Zinc finger | C2H2-type 9 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 397_419 | 1.0 | 587.0 | Zinc finger | C2H2-type 10 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 425_447 | 1.0 | 587.0 | Zinc finger | C2H2-type 11 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 453_475 | 1.0 | 587.0 | Zinc finger | C2H2-type 12 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 481_503 | 1.0 | 587.0 | Zinc finger | C2H2-type 13 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 509_531 | 1.0 | 587.0 | Zinc finger | C2H2-type 14%3B degenerate | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 537_559 | 1.0 | 587.0 | Zinc finger | C2H2-type 15%3B degenerate | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000328747 | 0 | 4 | 563_586 | 1.0 | 587.0 | Zinc finger | C2H2-type 16%3B degenerate | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 145_167 | 1.0 | 555.0 | Zinc finger | C2H2-type 1%3B degenerate | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 173_195 | 1.0 | 555.0 | Zinc finger | C2H2-type 2%3B degenerate | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 201_223 | 1.0 | 555.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 229_251 | 1.0 | 555.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 257_279 | 1.0 | 555.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 285_307 | 1.0 | 555.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 313_335 | 1.0 | 555.0 | Zinc finger | C2H2-type 7 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 341_363 | 1.0 | 555.0 | Zinc finger | C2H2-type 8 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 369_391 | 1.0 | 555.0 | Zinc finger | C2H2-type 9 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 397_419 | 1.0 | 555.0 | Zinc finger | C2H2-type 10 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 425_447 | 1.0 | 555.0 | Zinc finger | C2H2-type 11 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 453_475 | 1.0 | 555.0 | Zinc finger | C2H2-type 12 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 481_503 | 1.0 | 555.0 | Zinc finger | C2H2-type 13 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 509_531 | 1.0 | 555.0 | Zinc finger | C2H2-type 14%3B degenerate | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 537_559 | 1.0 | 555.0 | Zinc finger | C2H2-type 15%3B degenerate | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000357512 | 0 | 3 | 563_586 | 1.0 | 555.0 | Zinc finger | C2H2-type 16%3B degenerate | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 145_167 | 0 | 518.0 | Zinc finger | C2H2-type 1%3B degenerate | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 173_195 | 0 | 518.0 | Zinc finger | C2H2-type 2%3B degenerate | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 201_223 | 0 | 518.0 | Zinc finger | C2H2-type 3 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 229_251 | 0 | 518.0 | Zinc finger | C2H2-type 4 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 257_279 | 0 | 518.0 | Zinc finger | C2H2-type 5 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 285_307 | 0 | 518.0 | Zinc finger | C2H2-type 6 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 313_335 | 0 | 518.0 | Zinc finger | C2H2-type 7 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 341_363 | 0 | 518.0 | Zinc finger | C2H2-type 8 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 369_391 | 0 | 518.0 | Zinc finger | C2H2-type 9 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 397_419 | 0 | 518.0 | Zinc finger | C2H2-type 10 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 425_447 | 0 | 518.0 | Zinc finger | C2H2-type 11 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 453_475 | 0 | 518.0 | Zinc finger | C2H2-type 12 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 481_503 | 0 | 518.0 | Zinc finger | C2H2-type 13 | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 509_531 | 0 | 518.0 | Zinc finger | C2H2-type 14%3B degenerate | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 537_559 | 0 | 518.0 | Zinc finger | C2H2-type 15%3B degenerate | |
Tgene | ZNF92 | chrX:19701941 | chr7:64852815 | ENST00000450302 | 0 | 3 | 563_586 | 0 | 518.0 | Zinc finger | C2H2-type 16%3B degenerate |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | SH3KBP1 | chrX:19701941 | chr7:64852815 | ENST00000379698 | - | 5 | 17 | 602_664 | 205.0 | 629.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | SH3KBP1 | chrX:19701941 | chr7:64852815 | ENST00000379716 | - | 1 | 13 | 602_664 | 0 | 428.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | SH3KBP1 | chrX:19701941 | chr7:64852815 | ENST00000397821 | - | 6 | 18 | 602_664 | 242.0 | 666.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | SH3KBP1 | chrX:19701941 | chr7:64852815 | ENST00000379698 | - | 5 | 17 | 327_428 | 205.0 | 629.0 | Compositional bias | Note=Pro-rich |
Hgene | SH3KBP1 | chrX:19701941 | chr7:64852815 | ENST00000379716 | - | 1 | 13 | 327_428 | 0 | 428.0 | Compositional bias | Note=Pro-rich |
Hgene | SH3KBP1 | chrX:19701941 | chr7:64852815 | ENST00000397821 | - | 6 | 18 | 327_428 | 242.0 | 666.0 | Compositional bias | Note=Pro-rich |
Hgene | SH3KBP1 | chrX:19701941 | chr7:64852815 | ENST00000379698 | - | 5 | 17 | 267_328 | 205.0 | 629.0 | Domain | SH3 3 |
Hgene | SH3KBP1 | chrX:19701941 | chr7:64852815 | ENST00000379716 | - | 1 | 13 | 1_58 | 0 | 428.0 | Domain | SH3 1 |
Hgene | SH3KBP1 | chrX:19701941 | chr7:64852815 | ENST00000379716 | - | 1 | 13 | 267_328 | 0 | 428.0 | Domain | SH3 3 |
Hgene | SH3KBP1 | chrX:19701941 | chr7:64852815 | ENST00000379716 | - | 1 | 13 | 98_157 | 0 | 428.0 | Domain | SH3 2 |
Hgene | SH3KBP1 | chrX:19701941 | chr7:64852815 | ENST00000397821 | - | 6 | 18 | 267_328 | 242.0 | 666.0 | Domain | SH3 3 |
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Fusion Gene Sequence for SH3KBP1-ZNF92 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000397821_ENST00000328747_TCGA-IE-A4EJ-01A_SH3KBP1_chrX_19701941_-_ZNF92_chr7_64852815_length(transcript)=4025nt_BP=1017nt CGCAATTTCCACTCGCGGGGAGCAGGAAACCCGGCGCAGCCGGGCGCATTGGGCCGCGATGCAACAGCAGCAGCAGGAGTCGCCCCGGGG CAGCAGCGGCAGCAGCAGCAGAGGCAGCAGCGGGCGGCGCTGAGCCGCCGCCGCCGCCACTGAGGAAGAAGCCGGCCCAGCCGCCGCCGC GTCCGGACCCTCGCGCCTGGATCCCAGCGCCCCGATCCCGGCGCCCCAACCCCCACGCCCGCCTCCGCCAACTTTCACGCTGCCTCGGCG GCCCGGCCCGGCTCGACGCCAATGGTGGAGGCCATAGTGGAGTTTGACTACCAGGCCCAGCACGATGATGAGCTGACGATCAGCGTGGGT GAAATCATCACCAACATCAGGAAGGAGGATGGAGGCTGGTGGGAGGGACAGATCAACGGCAGGAGAGGTTTGTTCCCTGACAACTTTGTA AGAGAAATAAAGAAAGAGATGAAGAAAGACCCTCTCACCAACAAAGCTCCAGAAAAGCCCCTGCACGAAGTGCCCAGTGGAAACTCTTTG CTGTCTTCTGAAACGATTTTAAGAACCAATAAGAGAGGCGAGCGACGGAGGCGCCGGTGCCAGGTGGCATTCAGCTACCTGCCCCAGAAT GACGATGAACTTGAGCTGAAAGTTGGCGACATCATAGAGGTGGTAGGAGAGGTAGAGGAAGGATGGTGGGAAGGTGTTCTCAACGGGAAG ACTGGAATGTTTCCTTCCAACTTCATCAAGGAGCTGTCAGGGGAGTCGGATGAGCTTGGCATTTCCCAGGATGAGCAGCTATCCAAGTCA AGTTTAAGGGAAACCACAGGCTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAACTGCA GCAATCCAGCCCAAGAAAGTTAAGGGAGTGGGCTTTGGAGACATTTTCAAAGACAAGCCAATCAAACTAAGACCAAGGTCAATTGAAGTA GAAAATGACTTTCTGCCGGTAGAAAAGGGACCACTGACATTTAGGGATGTGAAAATAGAATTCTCTCTAGAGGAATGGCAATGCCTGGAC ACTGCGCAGCGGAATTTATATAGAGATGTGATGTTAGAGAACTACAGAAACCTGGTCTTCCTTGGTATTGCTGTCTCTAAGCCAGACCTG ATCACCTGGCTGGAGCAAGGAAAAGAGCCCTGGAATCTGAAGAGACATGAGATGGTAGACAAAACCCCAGTTATGTGTTCTCATTTTGCC CAAGATGTTTGGCCAGAGCACAGCATAAAAGATTCTTTCCAAAAAGTGATACTGAGAACATATGGAAAATATGGACATGAGAATTTACAG CTAAGAAAAGACCATAAAAGTGTGGATGCATGTAAGGTGTACAAAGGAGGTTATAATGGACTTAACCAGTGTTTGACAACTACTGACAGC AAGATATTTCAGTGTGATAAATATGTGAAAGTCTTTCATAAATTTCCAAATGTAAATAGAAATAAGATAAGACATACTGGAAAGAAACCT TTCAAATGTAAAAACCGTGGCAAATCATTTTGCATGCTTTCACAATTAACTCAACATAAGAAAATTCATACTAGAGAGTATTCTTACAAA TGTGAAGAATGTGGTAAAGCCTTTAACTGGTCCTCAACCCTTACTAAACATAAGATAATTCATACTGGAGAAAAACCCTACAAATGTGAA GAATGTGGCAAAGCTTTTAACCGGTCCTCAAATCTTACTAAACATAAAATAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGT GGCAAAGCTTTTAACCGGTCCTCAACCCTTACTAAACATAAAAGAATTCATACAGAAGAGAAACCCTACAAATGTGAAGAATGTGGCAAG GCCTTTAACCAGTTCTCGATTCTTAATAAACATAAGAGAATTCATATGGAAGATAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTT AGAGTATTCTCAATTCTTAAAAAACATAAGATAATCCATACTGGGGAAAAACCATACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAG TTCTCAAACCTTACTAAACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTGATGAATGTGGCAAAGCCTTTAACCAGTCCTCA ACCCTTACTAAACATAAAAGAATTCATACGGGAGAAAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAAACAGTCCTCAACCCTT ACTGAACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTGAAAAATGTGGCAAGGCCTTTAGCTGGTCCTCAGCTTTTACTAAA CATAAGAGAAATCATATGGAAGATAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAGTGTATTCTCAACCCTTACTAAACATAAA ATAATTCATACTAGAGAAAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTCCTCAATTTTTACTAAACATAAGATAATT CACACTGAAGGGAAATCCTACAAATGTGAAAAATGTGGCAATGCTTTTAACCAGTCCTCAAACCTTACTGCACGTAAGATAATTTATACT GGAGAGAAACCCTACAAATATGAAGAATGTGACAAAGCCTTTAACAAGTTCTCAACCCTTATTACACATCAGATAATTTATACTGGAGAG AAACCCTGCAAACATGAATGTGGCAGAGCCTTTAACAAATCCTCAAATTATACTAAAGAGAAACTACAAACCTGAAAGATGTGACAATGA TTTTCACTACACCTCAAACTTTTCTAAACATAAACCATATTGGTGCCCTAGAAATGTGAGGAATATGACAAGGACTTTAAATGGTTGTCA CGCTTGATTGTAGGTAAGATAATTTATATTGGAGAAAAATCCTCCAAGTATGAAGAATGTGGCAAACTTTTAACCAATCCTCACACCTTA TTGCACAGGAAAGCATTTATACTTGAGAAAAATTGTATAAAGAATATGGAAAAGCCATTTATATCTGCTCACATGTAAAAACATCAGTTC ATACTTAATAAAATGCAATTACCGTCAAATCTTTCAGAAAATATAAGCCTTTAATACGAGGAAGAGTATTCTTAAGATGAACATTACAAA TAGAAAGAGGGTTGTAGTACCTTTAGTTTTATGATAGATCTTATTGTACACATTTTGTACCAGAGGAAAACCCTAAAGCATTAGTTGCTC AAACTTTGTTCGACATCAGGGAATTTGTATTGGAGAAAAACCCTGCAAATGTAATAAATATGGAAAAACATTTTTTCAAAAACTACAGCT TGGAAAACATCAGAGAGTTCATACTAAAATATATTTTTGCAGATGCAGTAAATATGAAAAATATTTAATCCCAAATTAAGTCTATGTAAA TATCAGAATTCACAGTAGAAATCATAAGGCATAAGGCACTGATACTTCAGACATTACACTAAATTAGAGTGTTGAGTATAGGAGATCCAA AACTAAAATTGTTAGGTAAGTTATTTATATATAACTTTAAAAGAAGTAGAAGATTTTTTGGAGATTTATAATTACATTCAAAGTATACTT TTTTCTTGAAAAAAATTACAGATTTTTTGAAAAGCAATTGATGTAATTTAACTCTCAAATTCATGTTTTTCTTCATTCCTATTATATTCA CATGTGAAAGCAAGTGATCTGTTGTTGCTGAATCAGAGATATGAGAGATTCTTTTTTATAGGTGGGCATTATTTATGCCCCTTTCTGTGG AAGAGTAAGAAAATTAAAATACAAGATGCATGAGGAAAATGTAGAGATGCTCTTTGTGATTAACTTAGAATATTAAGTGCTACTTGAGGT ACATGTTCAGACTAACATTCTTTTGCAGTATAGTGAGAAAAAAACATTTTAAAATTAATTATCATTTTGTTGATTGTGCTTTTATGTAAT >In-frame_ENST00000397821_ENST00000328747_TCGA-IE-A4EJ-01A_SH3KBP1_chrX_19701941_-_ZNF92_chr7_64852815_length(amino acids)=827AA_start in transcript=291_stop in transcript=2774 MVEAIVEFDYQAQHDDELTISVGEIITNIRKEDGGWWEGQINGRRGLFPDNFVREIKKEMKKDPLTNKAPEKPLHEVPSGNSLLSSETIL RTNKRGERRRRRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKELSGESDELGISQDEQLSKSSLRETTG SESDGGDSSSTKSEGANGTVATAAIQPKKVKGVGFGDIFKDKPIKLRPRSIEVENDFLPVEKGPLTFRDVKIEFSLEEWQCLDTAQRNLY RDVMLENYRNLVFLGIAVSKPDLITWLEQGKEPWNLKRHEMVDKTPVMCSHFAQDVWPEHSIKDSFQKVILRTYGKYGHENLQLRKDHKS VDACKVYKGGYNGLNQCLTTTDSKIFQCDKYVKVFHKFPNVNRNKIRHTGKKPFKCKNRGKSFCMLSQLTQHKKIHTREYSYKCEECGKA FNWSSTLTKHKIIHTGEKPYKCEECGKAFNRSSNLTKHKIIHTGEKPYKCEECGKAFNRSSTLTKHKRIHTEEKPYKCEECGKAFNQFSI LNKHKRIHMEDKPYKCEECGKAFRVFSILKKHKIIHTGEKPYKCEECGKAFNQFSNLTKHKIIHTGEKPYKCDECGKAFNQSSTLTKHKR IHTGEKPYKCEECGKAFKQSSTLTEHKIIHTGEKPYKCEKCGKAFSWSSAFTKHKRNHMEDKPYKCEECGKAFSVFSTLTKHKIIHTREK PYKCEECGKAFNQSSIFTKHKIIHTEGKSYKCEKCGNAFNQSSNLTARKIIYTGEKPYKYEECDKAFNKFSTLITHQIIYTGEKPCKHEC -------------------------------------------------------------- >In-frame_ENST00000379698_ENST00000328747_TCGA-IE-A4EJ-01A_SH3KBP1_chrX_19701941_-_ZNF92_chr7_64852815_length(transcript)=3690nt_BP=682nt GAGCACGGAACTTATTCCTGCCCAGAGTTCAGACACAGCCAGAAATTACCATTTCATACTTCACAGAATGGAGGTTTCAGCAGCCAAAGC CCCAAGTGCCGCAGACTTGTCTGAGATTGAAATAAAGAAAGAGATGAAGAAAGACCCTCTCACCAACAAAGCTCCAGAAAAGCCCCTGCA CGAAGTGCCCAGTGGAAACTCTTTGCTGTCTTCTGAAACGATTTTAAGAACCAATAAGAGAGGCGAGCGACGGAGGCGCCGGTGCCAGGT GGCATTCAGCTACCTGCCCCAGAATGACGATGAACTTGAGCTGAAAGTTGGCGACATCATAGAGGTGGTAGGAGAGGTAGAGGAAGGATG GTGGGAAGGTGTTCTCAACGGGAAGACTGGAATGTTTCCTTCCAACTTCATCAAGGAGCTGTCAGGGGAGTCGGATGAGCTTGGCATTTC CCAGGATGAGCAGCTATCCAAGTCAAGTTTAAGGGAAACCACAGGCTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGG TGCCAACGGGACAGTGGCAACTGCAGCAATCCAGCCCAAGAAAGTTAAGGGAGTGGGCTTTGGAGACATTTTCAAAGACAAGCCAATCAA ACTAAGACCAAGGTCAATTGAAGTAGAAAATGACTTTCTGCCGGTAGAAAAGGGACCACTGACATTTAGGGATGTGAAAATAGAATTCTC TCTAGAGGAATGGCAATGCCTGGACACTGCGCAGCGGAATTTATATAGAGATGTGATGTTAGAGAACTACAGAAACCTGGTCTTCCTTGG TATTGCTGTCTCTAAGCCAGACCTGATCACCTGGCTGGAGCAAGGAAAAGAGCCCTGGAATCTGAAGAGACATGAGATGGTAGACAAAAC CCCAGTTATGTGTTCTCATTTTGCCCAAGATGTTTGGCCAGAGCACAGCATAAAAGATTCTTTCCAAAAAGTGATACTGAGAACATATGG AAAATATGGACATGAGAATTTACAGCTAAGAAAAGACCATAAAAGTGTGGATGCATGTAAGGTGTACAAAGGAGGTTATAATGGACTTAA CCAGTGTTTGACAACTACTGACAGCAAGATATTTCAGTGTGATAAATATGTGAAAGTCTTTCATAAATTTCCAAATGTAAATAGAAATAA GATAAGACATACTGGAAAGAAACCTTTCAAATGTAAAAACCGTGGCAAATCATTTTGCATGCTTTCACAATTAACTCAACATAAGAAAAT TCATACTAGAGAGTATTCTTACAAATGTGAAGAATGTGGTAAAGCCTTTAACTGGTCCTCAACCCTTACTAAACATAAGATAATTCATAC TGGAGAAAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAACCGGTCCTCAAATCTTACTAAACATAAAATAATTCATACTGGAGA GAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAACCGGTCCTCAACCCTTACTAAACATAAAAGAATTCATACAGAAGAGAAACC CTACAAATGTGAAGAATGTGGCAAGGCCTTTAACCAGTTCTCGATTCTTAATAAACATAAGAGAATTCATATGGAAGATAAACCCTACAA ATGTGAAGAATGTGGCAAAGCCTTTAGAGTATTCTCAATTCTTAAAAAACATAAGATAATCCATACTGGGGAAAAACCATACAAATGTGA AGAATGTGGCAAAGCCTTTAACCAGTTCTCAAACCTTACTAAACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTGATGAATG TGGCAAAGCCTTTAACCAGTCCTCAACCCTTACTAAACATAAAAGAATTCATACGGGAGAAAAACCCTACAAATGTGAAGAATGTGGCAA AGCTTTTAAACAGTCCTCAACCCTTACTGAACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTGAAAAATGTGGCAAGGCCTT TAGCTGGTCCTCAGCTTTTACTAAACATAAGAGAAATCATATGGAAGATAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAGTGT ATTCTCAACCCTTACTAAACATAAAATAATTCATACTAGAGAAAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTCCTC AATTTTTACTAAACATAAGATAATTCACACTGAAGGGAAATCCTACAAATGTGAAAAATGTGGCAATGCTTTTAACCAGTCCTCAAACCT TACTGCACGTAAGATAATTTATACTGGAGAGAAACCCTACAAATATGAAGAATGTGACAAAGCCTTTAACAAGTTCTCAACCCTTATTAC ACATCAGATAATTTATACTGGAGAGAAACCCTGCAAACATGAATGTGGCAGAGCCTTTAACAAATCCTCAAATTATACTAAAGAGAAACT ACAAACCTGAAAGATGTGACAATGATTTTCACTACACCTCAAACTTTTCTAAACATAAACCATATTGGTGCCCTAGAAATGTGAGGAATA TGACAAGGACTTTAAATGGTTGTCACGCTTGATTGTAGGTAAGATAATTTATATTGGAGAAAAATCCTCCAAGTATGAAGAATGTGGCAA ACTTTTAACCAATCCTCACACCTTATTGCACAGGAAAGCATTTATACTTGAGAAAAATTGTATAAAGAATATGGAAAAGCCATTTATATC TGCTCACATGTAAAAACATCAGTTCATACTTAATAAAATGCAATTACCGTCAAATCTTTCAGAAAATATAAGCCTTTAATACGAGGAAGA GTATTCTTAAGATGAACATTACAAATAGAAAGAGGGTTGTAGTACCTTTAGTTTTATGATAGATCTTATTGTACACATTTTGTACCAGAG GAAAACCCTAAAGCATTAGTTGCTCAAACTTTGTTCGACATCAGGGAATTTGTATTGGAGAAAAACCCTGCAAATGTAATAAATATGGAA AAACATTTTTTCAAAAACTACAGCTTGGAAAACATCAGAGAGTTCATACTAAAATATATTTTTGCAGATGCAGTAAATATGAAAAATATT TAATCCCAAATTAAGTCTATGTAAATATCAGAATTCACAGTAGAAATCATAAGGCATAAGGCACTGATACTTCAGACATTACACTAAATT AGAGTGTTGAGTATAGGAGATCCAAAACTAAAATTGTTAGGTAAGTTATTTATATATAACTTTAAAAGAAGTAGAAGATTTTTTGGAGAT TTATAATTACATTCAAAGTATACTTTTTTCTTGAAAAAAATTACAGATTTTTTGAAAAGCAATTGATGTAATTTAACTCTCAAATTCATG TTTTTCTTCATTCCTATTATATTCACATGTGAAAGCAAGTGATCTGTTGTTGCTGAATCAGAGATATGAGAGATTCTTTTTTATAGGTGG GCATTATTTATGCCCCTTTCTGTGGAAGAGTAAGAAAATTAAAATACAAGATGCATGAGGAAAATGTAGAGATGCTCTTTGTGATTAACT TAGAATATTAAGTGCTACTTGAGGTACATGTTCAGACTAACATTCTTTTGCAGTATAGTGAGAAAAAAACATTTTAAAATTAATTATCAT TTTGTTGATTGTGCTTTTATGTAATAAAATGCAGTACTTTAAAACATTTAGATTGTGTGTGAACTTAATTTTGTAATTAAACATTTTTTT >In-frame_ENST00000379698_ENST00000328747_TCGA-IE-A4EJ-01A_SH3KBP1_chrX_19701941_-_ZNF92_chr7_64852815_length(amino acids)=790AA_start in transcript=67_stop in transcript=2439 MEVSAAKAPSAADLSEIEIKKEMKKDPLTNKAPEKPLHEVPSGNSLLSSETILRTNKRGERRRRRCQVAFSYLPQNDDELELKVGDIIEV VGEVEEGWWEGVLNGKTGMFPSNFIKELSGESDELGISQDEQLSKSSLRETTGSESDGGDSSSTKSEGANGTVATAAIQPKKVKGVGFGD IFKDKPIKLRPRSIEVENDFLPVEKGPLTFRDVKIEFSLEEWQCLDTAQRNLYRDVMLENYRNLVFLGIAVSKPDLITWLEQGKEPWNLK RHEMVDKTPVMCSHFAQDVWPEHSIKDSFQKVILRTYGKYGHENLQLRKDHKSVDACKVYKGGYNGLNQCLTTTDSKIFQCDKYVKVFHK FPNVNRNKIRHTGKKPFKCKNRGKSFCMLSQLTQHKKIHTREYSYKCEECGKAFNWSSTLTKHKIIHTGEKPYKCEECGKAFNRSSNLTK HKIIHTGEKPYKCEECGKAFNRSSTLTKHKRIHTEEKPYKCEECGKAFNQFSILNKHKRIHMEDKPYKCEECGKAFRVFSILKKHKIIHT GEKPYKCEECGKAFNQFSNLTKHKIIHTGEKPYKCDECGKAFNQSSTLTKHKRIHTGEKPYKCEECGKAFKQSSTLTEHKIIHTGEKPYK CEKCGKAFSWSSAFTKHKRNHMEDKPYKCEECGKAFSVFSTLTKHKIIHTREKPYKCEECGKAFNQSSIFTKHKIIHTEGKSYKCEKCGN -------------------------------------------------------------- >In-frame_ENST00000379697_ENST00000328747_TCGA-IE-A4EJ-01A_SH3KBP1_chrX_19701941_-_ZNF92_chr7_64852815_length(transcript)=4015nt_BP=1007nt GCCGCCACTGAGGAAGAAGCCGGCCCAGCCGCCGCCGCGTCCGGACCCTCGCGCCTGGATCCCAGCGCCCCGATCCCGGCGCCCCAACCC CCACGCCCGCCTCCGCCAACTTTCACGCTGCCTCGGCGGCCCGGCCCGGCTCGACGCCAATGGTGGAGGCCATAGTGGAGTTTGACTACC AGGCCCAGCACGATGATGAGCTGACGATCAGCGTGGGTGAAATCATCACCAACATCAGGAAGGAGGATGGAGGCTGGTGGGAGGGACAGA TCAACGGCAGGAGAGGTTTGTTCCCTGACAACTTTGTAAGAGAAATAAAGAAAGAGATGAAGAAAGACCCTCTCACCAACAAAGCTCCAG AAAAGCCCCTGCACGAAGTGCCCAGTGGAAACTCTTTGCTGTCTTCTGAAACGATTTTAAGAACCAATAAGAGAGGCGAGCGACGGAGGC GCCGGTGCCAGGTGGCATTCAGCTACCTGCCCCAGAATGACGATGAACTTGAGCTGAAAGTTGGCGACATCATAGAGGTGGTAGGAGAGG TAGAGGAAGGATGGTGGGAAGGTGTTCTCAACGGGAAGACTGGAATGTTTCCTTCCAACTTCATCAAGGAGCTGTCAGGGGAGTCGGATG AGCTTGGCATTTCCCAGGATGAGCAGCTATCCAAGTCAAGGCCTGAAGGTCTCCCTCCAGCTTCTCTGCTGCCCTTTCCAGCTCACGGAG CAAAAGGAAAGACTACCTTTGAAGGGACAATTCTGTACCGAGCTGCACCGGGAAAGACGGAGGGCCACAGACGCTATTACAGTTTAAGGG AAACCACAGGCTCCGAGAGTGATGGGGGTGACTCAAGCAGCACCAAGTCTGAAGGTGCCAACGGGACAGTGGCAACTGCAGCAATCCAGC CCAAGAAAGTTAAGGGAGTGGGCTTTGGAGACATTTTCAAAGACAAGCCAATCAAACTAAGACCAAGGTCAATTGAAGTAGAAAATGACT TTCTGCCGGTAGAAAAGGGACCACTGACATTTAGGGATGTGAAAATAGAATTCTCTCTAGAGGAATGGCAATGCCTGGACACTGCGCAGC GGAATTTATATAGAGATGTGATGTTAGAGAACTACAGAAACCTGGTCTTCCTTGGTATTGCTGTCTCTAAGCCAGACCTGATCACCTGGC TGGAGCAAGGAAAAGAGCCCTGGAATCTGAAGAGACATGAGATGGTAGACAAAACCCCAGTTATGTGTTCTCATTTTGCCCAAGATGTTT GGCCAGAGCACAGCATAAAAGATTCTTTCCAAAAAGTGATACTGAGAACATATGGAAAATATGGACATGAGAATTTACAGCTAAGAAAAG ACCATAAAAGTGTGGATGCATGTAAGGTGTACAAAGGAGGTTATAATGGACTTAACCAGTGTTTGACAACTACTGACAGCAAGATATTTC AGTGTGATAAATATGTGAAAGTCTTTCATAAATTTCCAAATGTAAATAGAAATAAGATAAGACATACTGGAAAGAAACCTTTCAAATGTA AAAACCGTGGCAAATCATTTTGCATGCTTTCACAATTAACTCAACATAAGAAAATTCATACTAGAGAGTATTCTTACAAATGTGAAGAAT GTGGTAAAGCCTTTAACTGGTCCTCAACCCTTACTAAACATAAGATAATTCATACTGGAGAAAAACCCTACAAATGTGAAGAATGTGGCA AAGCTTTTAACCGGTCCTCAAATCTTACTAAACATAAAATAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTT TTAACCGGTCCTCAACCCTTACTAAACATAAAAGAATTCATACAGAAGAGAAACCCTACAAATGTGAAGAATGTGGCAAGGCCTTTAACC AGTTCTCGATTCTTAATAAACATAAGAGAATTCATATGGAAGATAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAGAGTATTCT CAATTCTTAAAAAACATAAGATAATCCATACTGGGGAAAAACCATACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTTCTCAAACC TTACTAAACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTGATGAATGTGGCAAAGCCTTTAACCAGTCCTCAACCCTTACTA AACATAAAAGAATTCATACGGGAGAAAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAAACAGTCCTCAACCCTTACTGAACATA AGATAATTCATACTGGAGAGAAACCCTACAAATGTGAAAAATGTGGCAAGGCCTTTAGCTGGTCCTCAGCTTTTACTAAACATAAGAGAA ATCATATGGAAGATAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAGTGTATTCTCAACCCTTACTAAACATAAAATAATTCATA CTAGAGAAAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTCCTCAATTTTTACTAAACATAAGATAATTCACACTGAAG GGAAATCCTACAAATGTGAAAAATGTGGCAATGCTTTTAACCAGTCCTCAAACCTTACTGCACGTAAGATAATTTATACTGGAGAGAAAC CCTACAAATATGAAGAATGTGACAAAGCCTTTAACAAGTTCTCAACCCTTATTACACATCAGATAATTTATACTGGAGAGAAACCCTGCA AACATGAATGTGGCAGAGCCTTTAACAAATCCTCAAATTATACTAAAGAGAAACTACAAACCTGAAAGATGTGACAATGATTTTCACTAC ACCTCAAACTTTTCTAAACATAAACCATATTGGTGCCCTAGAAATGTGAGGAATATGACAAGGACTTTAAATGGTTGTCACGCTTGATTG TAGGTAAGATAATTTATATTGGAGAAAAATCCTCCAAGTATGAAGAATGTGGCAAACTTTTAACCAATCCTCACACCTTATTGCACAGGA AAGCATTTATACTTGAGAAAAATTGTATAAAGAATATGGAAAAGCCATTTATATCTGCTCACATGTAAAAACATCAGTTCATACTTAATA AAATGCAATTACCGTCAAATCTTTCAGAAAATATAAGCCTTTAATACGAGGAAGAGTATTCTTAAGATGAACATTACAAATAGAAAGAGG GTTGTAGTACCTTTAGTTTTATGATAGATCTTATTGTACACATTTTGTACCAGAGGAAAACCCTAAAGCATTAGTTGCTCAAACTTTGTT CGACATCAGGGAATTTGTATTGGAGAAAAACCCTGCAAATGTAATAAATATGGAAAAACATTTTTTCAAAAACTACAGCTTGGAAAACAT CAGAGAGTTCATACTAAAATATATTTTTGCAGATGCAGTAAATATGAAAAATATTTAATCCCAAATTAAGTCTATGTAAATATCAGAATT CACAGTAGAAATCATAAGGCATAAGGCACTGATACTTCAGACATTACACTAAATTAGAGTGTTGAGTATAGGAGATCCAAAACTAAAATT GTTAGGTAAGTTATTTATATATAACTTTAAAAGAAGTAGAAGATTTTTTGGAGATTTATAATTACATTCAAAGTATACTTTTTTCTTGAA AAAAATTACAGATTTTTTGAAAAGCAATTGATGTAATTTAACTCTCAAATTCATGTTTTTCTTCATTCCTATTATATTCACATGTGAAAG CAAGTGATCTGTTGTTGCTGAATCAGAGATATGAGAGATTCTTTTTTATAGGTGGGCATTATTTATGCCCCTTTCTGTGGAAGAGTAAGA AAATTAAAATACAAGATGCATGAGGAAAATGTAGAGATGCTCTTTGTGATTAACTTAGAATATTAAGTGCTACTTGAGGTACATGTTCAG ACTAACATTCTTTTGCAGTATAGTGAGAAAAAAACATTTTAAAATTAATTATCATTTTGTTGATTGTGCTTTTATGTAATAAAATGCAGT >In-frame_ENST00000379697_ENST00000328747_TCGA-IE-A4EJ-01A_SH3KBP1_chrX_19701941_-_ZNF92_chr7_64852815_length(amino acids)=871AA_start in transcript=149_stop in transcript=2764 MVEAIVEFDYQAQHDDELTISVGEIITNIRKEDGGWWEGQINGRRGLFPDNFVREIKKEMKKDPLTNKAPEKPLHEVPSGNSLLSSETIL RTNKRGERRRRRCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKELSGESDELGISQDEQLSKSRPEGLPP ASLLPFPAHGAKGKTTFEGTILYRAAPGKTEGHRRYYSLRETTGSESDGGDSSSTKSEGANGTVATAAIQPKKVKGVGFGDIFKDKPIKL RPRSIEVENDFLPVEKGPLTFRDVKIEFSLEEWQCLDTAQRNLYRDVMLENYRNLVFLGIAVSKPDLITWLEQGKEPWNLKRHEMVDKTP VMCSHFAQDVWPEHSIKDSFQKVILRTYGKYGHENLQLRKDHKSVDACKVYKGGYNGLNQCLTTTDSKIFQCDKYVKVFHKFPNVNRNKI RHTGKKPFKCKNRGKSFCMLSQLTQHKKIHTREYSYKCEECGKAFNWSSTLTKHKIIHTGEKPYKCEECGKAFNRSSNLTKHKIIHTGEK PYKCEECGKAFNRSSTLTKHKRIHTEEKPYKCEECGKAFNQFSILNKHKRIHMEDKPYKCEECGKAFRVFSILKKHKIIHTGEKPYKCEE CGKAFNQFSNLTKHKIIHTGEKPYKCDECGKAFNQSSTLTKHKRIHTGEKPYKCEECGKAFKQSSTLTEHKIIHTGEKPYKCEKCGKAFS WSSAFTKHKRNHMEDKPYKCEECGKAFSVFSTLTKHKIIHTREKPYKCEECGKAFNQSSIFTKHKIIHTEGKSYKCEKCGNAFNQSSNLT -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for SH3KBP1-ZNF92 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for SH3KBP1-ZNF92 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for SH3KBP1-ZNF92 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | SH3KBP1 | C0007102 | Malignant tumor of colon | 1 | CTD_human |
Hgene | SH3KBP1 | C0009375 | Colonic Neoplasms | 1 | CTD_human |