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 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:SKIV2L-MSH5 (FusionGDB2 ID:81532) |
Fusion Gene Summary for SKIV2L-MSH5 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: SKIV2L-MSH5 | Fusion gene ID: 81532 | Hgene | Tgene | Gene symbol | SKIV2L | MSH5 | Gene ID | 6499 | 4439 |
| Gene name | Ski2 like RNA helicase | mutS homolog 5 | |
| Synonyms | 170A|DDX13|HLP|SKI2|SKI2W|SKIV2|SKIV2L1|THES2 | G7|MUTSH5|NG23|POF13 | |
| Cytomap | 6p21.33 | 6p21.33 | |
| Type of gene | protein-coding | protein-coding | |
| Description | helicase SKI2WSKI2 homolog, superkiller viralicidic activity 2-likehelicase-like proteinsuperkiller viralicidic activity 2-like | mutS protein homolog 5 | |
| Modification date | 20200313 | 20200313 | |
| UniProtAcc | . | O43196 | |
| Ensembl transtripts involved in fusion gene | ENST00000375394, ENST00000488648, ENST00000544581, ENST00000448219, ENST00000471547, ENST00000429465, ENST00000476338, ENST00000412823, ENST00000480914, ENST00000383336, ENST00000461360, ENST00000421789, ENST00000466463, | ENST00000375742, ENST00000375755, ENST00000375750, ENST00000534153, ENST00000375703, ENST00000375740, ENST00000431848, ENST00000482280, ENST00000395853, ENST00000430216, ENST00000486924, ENST00000416549, ENST00000456839, ENST00000478326, ENST00000458144, ENST00000419269, ENST00000414412, ENST00000549746, ENST00000427735, ENST00000457742, ENST00000497157, ENST00000435700, ENST00000436559, ENST00000439816, ENST00000460275, ENST00000549604, ENST00000441395, ENST00000441401, ENST00000578225, ENST00000473342, ENST00000448617, ENST00000436192, ENST00000436004, ENST00000490125, ENST00000457917, ENST00000480915, ENST00000443040, ENST00000448169, | |
| Fusion gene scores | * DoF score | 6 X 5 X 5=150 | 5 X 6 X 4=120 |
| # samples | 6 | 5 | |
| ** MAII score | log2(6/150*10)=-1.32192809488736 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/120*10)=-1.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: SKIV2L [Title/Abstract] AND MSH5 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | SKIV2L(31934623)-MSH5(31715164), # samples:1 | ||
| Anticipated loss of major functional domain due to fusion event. | SKIV2L-MSH5 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene breakpoints across SKIV2L (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene breakpoints across MSH5 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | BRCA | TCGA-BH-A0DX-01A | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
Top |
Fusion Gene ORF analysis for SKIV2L-MSH5 |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| Frame-shift | ENST00000375394 | ENST00000375742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| Frame-shift | ENST00000375394 | ENST00000375755 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| Frame-shift | ENST00000375394 | ENST00000375750 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| Frame-shift | ENST00000375394 | ENST00000534153 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| Frame-shift | ENST00000375394 | ENST00000375703 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| Frame-shift | ENST00000375394 | ENST00000375740 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-5UTR | ENST00000375394 | ENST00000431848 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000482280 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000395853 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000430216 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000486924 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000416549 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000456839 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000478326 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000458144 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000419269 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000414412 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000549746 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000427735 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000457742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000497157 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000435700 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000436559 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000439816 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000460275 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000549604 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000441395 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000441401 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000578225 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000473342 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000448617 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000436192 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000436004 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000490125 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000457917 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000480915 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000443040 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000375394 | ENST00000448169 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000488648 | ENST00000375742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000488648 | ENST00000375755 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000488648 | ENST00000375750 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000488648 | ENST00000534153 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000488648 | ENST00000375703 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000488648 | ENST00000375740 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-5UTR | ENST00000488648 | ENST00000431848 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000482280 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000395853 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000430216 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000486924 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000416549 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000456839 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000478326 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000458144 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000419269 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000414412 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000549746 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000427735 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000457742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000497157 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000435700 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000436559 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000439816 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000460275 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000549604 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000441395 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000441401 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000578225 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000473342 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000448617 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000436192 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000436004 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000490125 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000457917 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000480915 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000443040 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000488648 | ENST00000448169 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| Frame-shift | ENST00000544581 | ENST00000375742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| Frame-shift | ENST00000544581 | ENST00000375755 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| Frame-shift | ENST00000544581 | ENST00000375750 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| Frame-shift | ENST00000544581 | ENST00000534153 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| Frame-shift | ENST00000544581 | ENST00000375703 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| Frame-shift | ENST00000544581 | ENST00000375740 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-5UTR | ENST00000544581 | ENST00000431848 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000482280 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000395853 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000430216 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000486924 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000416549 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000456839 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000478326 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000458144 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000419269 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000414412 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000549746 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000427735 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000457742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000497157 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000435700 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000436559 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000439816 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000460275 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000549604 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000441395 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000441401 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000578225 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000473342 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000448617 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000436192 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000436004 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000490125 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000457917 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000480915 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000443040 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| 5CDS-intron | ENST00000544581 | ENST00000448169 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000448219 | ENST00000375742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000448219 | ENST00000375755 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000448219 | ENST00000375750 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000448219 | ENST00000534153 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000448219 | ENST00000375703 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000448219 | ENST00000375740 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-5UTR | ENST00000448219 | ENST00000431848 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000482280 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000395853 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000430216 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000486924 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000416549 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000456839 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000478326 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000458144 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000419269 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000414412 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000549746 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000427735 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000457742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000497157 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000435700 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000436559 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000439816 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000460275 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000549604 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000441395 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000441401 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000578225 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000473342 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000448617 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000436192 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000436004 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000490125 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000457917 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000480915 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000443040 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000448219 | ENST00000448169 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000471547 | ENST00000375742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000471547 | ENST00000375755 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000471547 | ENST00000375750 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000471547 | ENST00000534153 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000471547 | ENST00000375703 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000471547 | ENST00000375740 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-5UTR | ENST00000471547 | ENST00000431848 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000482280 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000395853 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000430216 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000486924 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000416549 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000456839 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000478326 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000458144 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000419269 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000414412 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000549746 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000427735 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000457742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000497157 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000435700 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000436559 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000439816 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000460275 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000549604 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000441395 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000441401 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000578225 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000473342 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000448617 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000436192 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000436004 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000490125 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000457917 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000480915 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000443040 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000471547 | ENST00000448169 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000429465 | ENST00000375742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000429465 | ENST00000375755 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000429465 | ENST00000375750 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000429465 | ENST00000534153 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000429465 | ENST00000375703 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000429465 | ENST00000375740 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-5UTR | ENST00000429465 | ENST00000431848 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000482280 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000395853 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000430216 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000486924 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000416549 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000456839 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000478326 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000458144 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000419269 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000414412 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000549746 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000427735 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000457742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000497157 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000435700 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000436559 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000439816 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000460275 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000549604 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000441395 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000441401 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000578225 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000473342 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000448617 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000436192 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000436004 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000490125 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000457917 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000480915 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000443040 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000429465 | ENST00000448169 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000476338 | ENST00000375742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000476338 | ENST00000375755 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000476338 | ENST00000375750 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000476338 | ENST00000534153 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000476338 | ENST00000375703 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000476338 | ENST00000375740 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-5UTR | ENST00000476338 | ENST00000431848 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000482280 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000395853 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000430216 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000486924 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000416549 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000456839 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000478326 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000458144 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000419269 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000414412 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000549746 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000427735 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000457742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000497157 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000435700 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000436559 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000439816 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000460275 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000549604 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000441395 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000441401 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000578225 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000473342 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000448617 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000436192 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000436004 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000490125 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000457917 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000480915 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000443040 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000476338 | ENST00000448169 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000412823 | ENST00000375742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000412823 | ENST00000375755 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000412823 | ENST00000375750 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000412823 | ENST00000534153 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000412823 | ENST00000375703 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000412823 | ENST00000375740 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-5UTR | ENST00000412823 | ENST00000431848 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000482280 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000395853 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000430216 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000486924 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000416549 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000456839 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000478326 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000458144 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000419269 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000414412 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000549746 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000427735 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000457742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000497157 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000435700 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000436559 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000439816 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000460275 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000549604 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000441395 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000441401 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000578225 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000473342 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000448617 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000436192 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000436004 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000490125 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000457917 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000480915 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000443040 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000412823 | ENST00000448169 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000480914 | ENST00000375742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000480914 | ENST00000375755 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000480914 | ENST00000375750 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000480914 | ENST00000534153 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000480914 | ENST00000375703 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000480914 | ENST00000375740 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-5UTR | ENST00000480914 | ENST00000431848 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000482280 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000395853 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000430216 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000486924 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000416549 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000456839 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000478326 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000458144 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000419269 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000414412 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000549746 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000427735 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000457742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000497157 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000435700 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000436559 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000439816 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000460275 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000549604 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000441395 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000441401 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000578225 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000473342 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000448617 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000436192 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000436004 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000490125 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000457917 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000480915 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000443040 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000480914 | ENST00000448169 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000383336 | ENST00000375742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000383336 | ENST00000375755 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000383336 | ENST00000375750 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000383336 | ENST00000534153 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000383336 | ENST00000375703 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000383336 | ENST00000375740 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-5UTR | ENST00000383336 | ENST00000431848 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000482280 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000395853 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000430216 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000486924 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000416549 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000456839 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000478326 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000458144 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000419269 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000414412 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000549746 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000427735 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000457742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000497157 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000435700 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000436559 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000439816 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000460275 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000549604 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000441395 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000441401 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000578225 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000473342 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000448617 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000436192 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000436004 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000490125 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000457917 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000480915 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000443040 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000383336 | ENST00000448169 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000461360 | ENST00000375742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000461360 | ENST00000375755 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000461360 | ENST00000375750 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000461360 | ENST00000534153 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000461360 | ENST00000375703 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000461360 | ENST00000375740 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-5UTR | ENST00000461360 | ENST00000431848 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000482280 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000395853 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000430216 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000486924 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000416549 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000456839 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000478326 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000458144 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000419269 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000414412 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000549746 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000427735 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000457742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000497157 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000435700 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000436559 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000439816 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000460275 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000549604 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000441395 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000441401 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000578225 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000473342 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000448617 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000436192 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000436004 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000490125 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000457917 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000480915 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000443040 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000461360 | ENST00000448169 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000421789 | ENST00000375742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000421789 | ENST00000375755 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000421789 | ENST00000375750 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000421789 | ENST00000534153 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000421789 | ENST00000375703 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000421789 | ENST00000375740 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-5UTR | ENST00000421789 | ENST00000431848 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000482280 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000395853 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000430216 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000486924 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000416549 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000456839 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000478326 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000458144 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000419269 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000414412 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000549746 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000427735 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000457742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000497157 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000435700 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000436559 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000439816 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000460275 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000549604 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000441395 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000441401 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000578225 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000473342 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000448617 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000436192 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000436004 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000490125 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000457917 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000480915 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000443040 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000421789 | ENST00000448169 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000466463 | ENST00000375742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000466463 | ENST00000375755 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000466463 | ENST00000375750 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000466463 | ENST00000534153 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000466463 | ENST00000375703 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-3CDS | ENST00000466463 | ENST00000375740 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-5UTR | ENST00000466463 | ENST00000431848 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000482280 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000395853 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000430216 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000486924 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000416549 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000456839 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000478326 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000458144 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000419269 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000414412 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000549746 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000427735 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000457742 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000497157 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000435700 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000436559 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000439816 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000460275 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000549604 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000441395 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000441401 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000578225 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000473342 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000448617 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000436192 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000436004 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000490125 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000457917 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000480915 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000443040 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| intron-intron | ENST00000466463 | ENST00000448169 | SKIV2L | chr6 | 31934623 | - | MSH5 | chr6 | 31715164 | + |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
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Fusion Genomic Features for SKIV2L-MSH5 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for SKIV2L-MSH5 |
| Go to FGviewer for the breakpoints of :-: - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | MSH5 |
| FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Involved in DNA mismatch repair and meiotic recombination processes. Facilitates crossovers between homologs during meiosis (By similarity). {ECO:0000250}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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Fusion Gene Sequence for SKIV2L-MSH5 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
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Fusion Gene PPI Analysis for SKIV2L-MSH5 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for SKIV2L-MSH5 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for SKIV2L-MSH5 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | SKIV2L | C1857276 | Trichohepatoenteric Syndrome | 3 | CTD_human;GENOMICS_ENGLAND;ORPHANET |
| Hgene | SKIV2L | C3281289 | TRICHOHEPATOENTERIC SYNDROME 2 | 3 | GENOMICS_ENGLAND;UNIPROT |
| Hgene | SKIV2L | C0021053 | Immune System Diseases | 1 | GENOMICS_ENGLAND |
| Tgene | MSH5 | C2239176 | Liver carcinoma | 1 | CTD_human |
| Tgene | MSH5 | C3469524 | PROSTATE CANCER, SUSCEPTIBILITY TO | 1 | GENOMICS_ENGLAND |
| Tgene | MSH5 | C4479510 | PREMATURE OVARIAN FAILURE 13 | 1 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
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