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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:SLC43A2-SMG6 (FusionGDB2 ID:82682)

Fusion Gene Summary for SLC43A2-SMG6

check button Fusion gene summary
Fusion gene informationFusion gene name: SLC43A2-SMG6
Fusion gene ID: 82682
HgeneTgene
Gene symbol

SLC43A2

SMG6

Gene ID

124935

23293

Gene namesolute carrier family 43 member 2SMG6 nonsense mediated mRNA decay factor
SynonymsLAT4C17orf31|EST1A|SMG-6|hSMG5/7a
Cytomap

17p13.3

17p13.3

Type of geneprotein-codingprotein-coding
Descriptionlarge neutral amino acids transporter small subunit 4L-type amino acid transporter 4solute carrier family 43 (amino acid system L transporter), member 2telomerase-binding protein EST1AEST1 telomerase component homolog Aever shorter telomeres 1Asmg-6 homolog, nonsense mediated mRNA decay factortelomerase subunit EST1A
Modification date2020031320200320
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000301335, ENST00000571650, 
ENST00000382147, ENST00000412517, 
ENST00000574274, 		ENST00000544865, 
ENST00000263073, ENST00000354901, 
ENST00000536871, ENST00000573166, 
Fusion gene scores* DoF score10 X 10 X 7=70021 X 16 X 8=2688
# samples 1222
** MAII scorelog2(12/700*10)=-2.54432051622381
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(22/2688*10)=-3.6109577092541
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: SLC43A2 [Title/Abstract] AND SMG6 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointSLC43A2(1516489)-SMG6(2187029), # samples:3
Anticipated loss of major functional domain due to fusion event.SLC43A2-SMG6 seems lost the major protein functional domain in Hgene partner, which is a IUPHAR drug target due to the frame-shifted ORF.
SLC43A2-SMG6 seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF.
SLC43A2-SMG6 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneSMG6

GO:1904354

negative regulation of telomere capping

12676087


check buttonFusion gene breakpoints across SLC43A2 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across SMG6 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4BRCATCGA-A8-A06Z-01ASLC43A2chr17

1516489

-SMG6chr17

2187029

-
ChimerDB4BRCATCGA-A8-A06ZSLC43A2chr17

1516488

-SMG6chr17

2187029

-
ChimerDB4BRCATCGA-A8-A06Z-01ASLC43A2chr17

1516489

-SMG6chr17

2187029

-
ChimerDB4BRCATCGA-A8-A06Z-01ASLC43A2chr17

1516489

-SMG6chr17

2187029

-


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Fusion Gene ORF analysis for SLC43A2-SMG6

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000301335ENST00000544865SLC43A2chr17

1516489

-SMG6chr17

2187029

-
In-frameENST00000301335ENST00000263073SLC43A2chr17

1516489

-SMG6chr17

2187029

-
5CDS-intronENST00000301335ENST00000354901SLC43A2chr17

1516489

-SMG6chr17

2187029

-
5CDS-intronENST00000301335ENST00000536871SLC43A2chr17

1516489

-SMG6chr17

2187029

-
5CDS-intronENST00000301335ENST00000573166SLC43A2chr17

1516489

-SMG6chr17

2187029

-
Frame-shiftENST00000571650ENST00000544865SLC43A2chr17

1516489

-SMG6chr17

2187029

-
Frame-shiftENST00000571650ENST00000263073SLC43A2chr17

1516489

-SMG6chr17

2187029

-
5CDS-intronENST00000571650ENST00000354901SLC43A2chr17

1516489

-SMG6chr17

2187029

-
5CDS-intronENST00000571650ENST00000536871SLC43A2chr17

1516489

-SMG6chr17

2187029

-
5CDS-intronENST00000571650ENST00000573166SLC43A2chr17

1516489

-SMG6chr17

2187029

-
In-frameENST00000382147ENST00000544865SLC43A2chr17

1516489

-SMG6chr17

2187029

-
In-frameENST00000382147ENST00000263073SLC43A2chr17

1516489

-SMG6chr17

2187029

-
5CDS-intronENST00000382147ENST00000354901SLC43A2chr17

1516489

-SMG6chr17

2187029

-
5CDS-intronENST00000382147ENST00000536871SLC43A2chr17

1516489

-SMG6chr17

2187029

-
5CDS-intronENST00000382147ENST00000573166SLC43A2chr17

1516489

-SMG6chr17

2187029

-
intron-3CDSENST00000412517ENST00000544865SLC43A2chr17

1516489

-SMG6chr17

2187029

-
intron-3CDSENST00000412517ENST00000263073SLC43A2chr17

1516489

-SMG6chr17

2187029

-
intron-intronENST00000412517ENST00000354901SLC43A2chr17

1516489

-SMG6chr17

2187029

-
intron-intronENST00000412517ENST00000536871SLC43A2chr17

1516489

-SMG6chr17

2187029

-
intron-intronENST00000412517ENST00000573166SLC43A2chr17

1516489

-SMG6chr17

2187029

-
intron-3CDSENST00000574274ENST00000544865SLC43A2chr17

1516489

-SMG6chr17

2187029

-
intron-3CDSENST00000574274ENST00000263073SLC43A2chr17

1516489

-SMG6chr17

2187029

-
intron-intronENST00000574274ENST00000354901SLC43A2chr17

1516489

-SMG6chr17

2187029

-
intron-intronENST00000574274ENST00000536871SLC43A2chr17

1516489

-SMG6chr17

2187029

-
intron-intronENST00000574274ENST00000573166SLC43A2chr17

1516489

-SMG6chr17

2187029

-
In-frameENST00000301335ENST00000544865SLC43A2chr17

1516488

-SMG6chr17

2187029

-
In-frameENST00000301335ENST00000263073SLC43A2chr17

1516488

-SMG6chr17

2187029

-
5CDS-intronENST00000301335ENST00000354901SLC43A2chr17

1516488

-SMG6chr17

2187029

-
5CDS-intronENST00000301335ENST00000536871SLC43A2chr17

1516488

-SMG6chr17

2187029

-
5CDS-intronENST00000301335ENST00000573166SLC43A2chr17

1516488

-SMG6chr17

2187029

-
Frame-shiftENST00000571650ENST00000544865SLC43A2chr17

1516488

-SMG6chr17

2187029

-
Frame-shiftENST00000571650ENST00000263073SLC43A2chr17

1516488

-SMG6chr17

2187029

-
5CDS-intronENST00000571650ENST00000354901SLC43A2chr17

1516488

-SMG6chr17

2187029

-
5CDS-intronENST00000571650ENST00000536871SLC43A2chr17

1516488

-SMG6chr17

2187029

-
5CDS-intronENST00000571650ENST00000573166SLC43A2chr17

1516488

-SMG6chr17

2187029

-
In-frameENST00000382147ENST00000544865SLC43A2chr17

1516488

-SMG6chr17

2187029

-
In-frameENST00000382147ENST00000263073SLC43A2chr17

1516488

-SMG6chr17

2187029

-
5CDS-intronENST00000382147ENST00000354901SLC43A2chr17

1516488

-SMG6chr17

2187029

-
5CDS-intronENST00000382147ENST00000536871SLC43A2chr17

1516488

-SMG6chr17

2187029

-
5CDS-intronENST00000382147ENST00000573166SLC43A2chr17

1516488

-SMG6chr17

2187029

-
intron-3CDSENST00000412517ENST00000544865SLC43A2chr17

1516488

-SMG6chr17

2187029

-
intron-3CDSENST00000412517ENST00000263073SLC43A2chr17

1516488

-SMG6chr17

2187029

-
intron-intronENST00000412517ENST00000354901SLC43A2chr17

1516488

-SMG6chr17

2187029

-
intron-intronENST00000412517ENST00000536871SLC43A2chr17

1516488

-SMG6chr17

2187029

-
intron-intronENST00000412517ENST00000573166SLC43A2chr17

1516488

-SMG6chr17

2187029

-
intron-3CDSENST00000574274ENST00000544865SLC43A2chr17

1516488

-SMG6chr17

2187029

-
intron-3CDSENST00000574274ENST00000263073SLC43A2chr17

1516488

-SMG6chr17

2187029

-
intron-intronENST00000574274ENST00000354901SLC43A2chr17

1516488

-SMG6chr17

2187029

-
intron-intronENST00000574274ENST00000536871SLC43A2chr17

1516488

-SMG6chr17

2187029

-
intron-intronENST00000574274ENST00000573166SLC43A2chr17

1516488

-SMG6chr17

2187029

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000301335SLC43A2chr171516489-ENST00000544865SMG6chr172187029-4166590892512807
ENST00000301335SLC43A2chr171516489-ENST00000263073SMG6chr172187029-4162590892512807
ENST00000382147SLC43A2chr171516489-ENST00000544865SMG6chr172187029-4166590892512807
ENST00000382147SLC43A2chr171516489-ENST00000263073SMG6chr172187029-4162590892512807
ENST00000301335SLC43A2chr171516488-ENST00000544865SMG6chr172187029-4166590892512807
ENST00000301335SLC43A2chr171516488-ENST00000263073SMG6chr172187029-4162590892512807
ENST00000382147SLC43A2chr171516488-ENST00000544865SMG6chr172187029-4166590892512807
ENST00000382147SLC43A2chr171516488-ENST00000263073SMG6chr172187029-4162590892512807

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000301335ENST00000544865SLC43A2chr171516489-SMG6chr172187029-0.0027119660.9972881
ENST00000301335ENST00000263073SLC43A2chr171516489-SMG6chr172187029-0.002730790.9972692
ENST00000382147ENST00000544865SLC43A2chr171516489-SMG6chr172187029-0.0027119660.9972881
ENST00000382147ENST00000263073SLC43A2chr171516489-SMG6chr172187029-0.002730790.9972692
ENST00000301335ENST00000544865SLC43A2chr171516488-SMG6chr172187029-0.0027119660.9972881
ENST00000301335ENST00000263073SLC43A2chr171516488-SMG6chr172187029-0.002730790.9972692
ENST00000382147ENST00000544865SLC43A2chr171516488-SMG6chr172187029-0.0027119660.9972881
ENST00000382147ENST00000263073SLC43A2chr171516488-SMG6chr172187029-0.002730790.9972692

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Fusion Genomic Features for SLC43A2-SMG6


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for SLC43A2-SMG6


check button Go to

FGviewer for the breakpoints of chr17:1516489-chr17:2187029

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000301335-514120_140167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000301335-514143_163167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000301335-51420_40167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000301335-51490_110167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000571650-515120_140167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000571650-515143_163167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000571650-51520_40167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000571650-51590_110167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000301335-514120_140167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000301335-514143_163167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000301335-51420_40167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000301335-51490_110167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000571650-515120_140167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000571650-515143_163167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000571650-51520_40167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000571650-51590_110167.0574.0TransmembraneHelical
TgeneSMG6chr17:1516488chr17:2187029ENST000002630735191197_1239779.01420.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516488chr17:2187029ENST000003549010121197_12390512.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516488chr17:2187029ENST00000354901012163_1930512.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516488chr17:2187029ENST00000354901012567_6250512.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516488chr17:2187029ENST000005368710111197_12390512.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516488chr17:2187029ENST00000536871011163_1930512.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516488chr17:2187029ENST00000536871011567_6250512.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516488chr17:2187029ENST000005448655191197_1239748.01389.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516489chr17:2187029ENST000002630735191197_1239779.01420.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516489chr17:2187029ENST000003549010121197_12390512.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516489chr17:2187029ENST00000354901012163_1930512.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516489chr17:2187029ENST00000354901012567_6250512.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516489chr17:2187029ENST000005368710111197_12390512.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516489chr17:2187029ENST00000536871011163_1930512.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516489chr17:2187029ENST00000536871011567_6250512.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516489chr17:2187029ENST000005448655191197_1239748.01389.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516488chr17:2187029ENST000002630735191246_1397779.01420.0DomainNote=PINc
TgeneSMG6chr17:1516488chr17:2187029ENST000003549010121246_13970512.0DomainNote=PINc
TgeneSMG6chr17:1516488chr17:2187029ENST000005368710111246_13970512.0DomainNote=PINc
TgeneSMG6chr17:1516488chr17:2187029ENST000005448655191246_1397748.01389.0DomainNote=PINc
TgeneSMG6chr17:1516489chr17:2187029ENST000002630735191246_1397779.01420.0DomainNote=PINc
TgeneSMG6chr17:1516489chr17:2187029ENST000003549010121246_13970512.0DomainNote=PINc
TgeneSMG6chr17:1516489chr17:2187029ENST000005368710111246_13970512.0DomainNote=PINc
TgeneSMG6chr17:1516489chr17:2187029ENST000005448655191246_1397748.01389.0DomainNote=PINc

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000301335-514409_413167.0570.0Compositional biasNote=Poly-Lys
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000571650-515409_413167.0574.0Compositional biasNote=Poly-Lys
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000301335-514409_413167.0570.0Compositional biasNote=Poly-Lys
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000571650-515409_413167.0574.0Compositional biasNote=Poly-Lys
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000301335-514177_197167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000301335-514203_223167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000301335-514323_345167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000301335-514365_385167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000301335-514435_455167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000301335-514462_482167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000301335-514490_510167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000301335-514516_536167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000571650-515177_197167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000571650-515203_223167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000571650-515323_345167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000571650-515365_385167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000571650-515435_455167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000571650-515462_482167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000571650-515490_510167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516488chr17:2187029ENST00000571650-515516_536167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000301335-514177_197167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000301335-514203_223167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000301335-514323_345167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000301335-514365_385167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000301335-514435_455167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000301335-514462_482167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000301335-514490_510167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000301335-514516_536167.0570.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000571650-515177_197167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000571650-515203_223167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000571650-515323_345167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000571650-515365_385167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000571650-515435_455167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000571650-515462_482167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000571650-515490_510167.0574.0TransmembraneHelical
HgeneSLC43A2chr17:1516489chr17:2187029ENST00000571650-515516_536167.0574.0TransmembraneHelical
TgeneSMG6chr17:1516488chr17:2187029ENST00000263073519163_193779.01420.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516488chr17:2187029ENST00000263073519567_625779.01420.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516488chr17:2187029ENST00000544865519163_193748.01389.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516488chr17:2187029ENST00000544865519567_625748.01389.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516489chr17:2187029ENST00000263073519163_193779.01420.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516489chr17:2187029ENST00000263073519567_625779.01420.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516489chr17:2187029ENST00000544865519163_193748.01389.0Coiled coilOntology_term=ECO:0000255
TgeneSMG6chr17:1516489chr17:2187029ENST00000544865519567_625748.01389.0Coiled coilOntology_term=ECO:0000255


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Fusion Gene Sequence for SLC43A2-SMG6


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000301335_ENST00000544865_TCGA-A8-A06Z-01A_SLC43A2_chr17_1516489_-_SMG6_chr17_2187029_length(transcript)=4166nt_BP=590nt
AGAAAAGGCGCCGGGCGGGCCCGACACACGCCGGAGGAGCCGGGTGGTGCAGAGCCGGAGCCGGAGCCGGAGCCGCGCCGCGCCGCACCA
TGGCGCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTGGATGGCCTGCACGGCCGTGCTGGAGAACCTCCTCTTCTCGGCAGTCCTCC
TGGGCTGGGGCTCGCTGCTCATCATGCTCAAGTCAGAGGGCTTTTACTCCTACCTGTGTACCGAGCCAGAGAATGTCACCAATGGCACAG
TGGGCGGCACAGCAGAGCCGGGGCACGAGGAGGTGAGCTGGATGAACGGCTGGCTCAGCTGCCAGGCCCAGGACGAGATGCTAAATTTGG
CCTTCACTGTGGGCTCCTTTCTGCTCAGTGCCATCACCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAAGCTCAGGCTGC
TGGGCAGCGCCTGCTTCGCGGTTTCCTGCTTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGCTCATCTTCATCGCCC
TGGCTCTGAATGGCTTTGGTGGGATGTGTATGACCTTCACCTCATTAACAAGGAGGAAGCTTGACGCTGTCTATTACTATATGCGCAGTT
TAGCTGCCAGCAACCCTATCCTGACTGCCAAGGAGAGTCTCATGAGCTTGTTTGAAGAGACCAAGCGGAAGGCAGAACAGATGGAAAAGA
AGCAACATGAGGAATTTGACCTGAGCCCTGACCAGTGGCGGAAAGGAAAGAAGTCTACTTTCCGGCATGTTGGAGATGACACCACTCGCC
TGGAGATCTGGATTCATCCATCCCATCCACGGTCTTCCCAGGGCACTGAGTCTGGGAAGGATTCTGAGCAAGAGAATGGGCTGGGCAGCC
TGAGTCCCAGTGATCTGAACAAAAGGTTCATCCTCAGTTTTCTCCATGCCCATGGGAAGCTGTTTACCCGGATTGGGATGGAGACATTCC
CTGCAGTGGCTGAGAAGGTCCTCAAGGAGTTCCAGGTGTTACTGCAGCACAGCCCCTCTCCCATTGGAAGTACCCGCATGCTGCAGCTTA
TGACCATCAATATGTTTGCAGTACACAACTCCCAGCTGAAAGACTGCTTCTCGGAGGAGTGCCGCTCTGTGATCCAGGAACAAGCCGCAG
CTCTGGGCTTGGCCATGTTTTCTCTACTGGTCCGCCGCTGCACCTGCTTACTTAAGGAGTCCGCCAAAGCTCAGCTGTCCTCTCCTGAGG
ACCAGGATGACCAAGACGACATCAAGGTGTCTTCCTTTGTCCCGGACCTGAAGGAGCTGCTCCCCAGTGTCAAAGTCTGGTCAGATTGGA
TGCTCGGCTACCCGGACACCTGGAATCCTCCTCCCACATCCCTGGATCTGCCCTCGCATGTTGCTGTGGATGTATGGTCGACGCTGGCTG
ATTTCTGTAACATACTGACTGCAGTGAATCAGTCTGAGGTGCCACTGTACAAGGACCCGGATGATGACCTCACCCTTCTTATCCTGGAAG
AGGATCGGCTTCTCTCGGGCTTTGTCCCCTTGCTGGCTGCCCCTCAGGACCCCTGCTACGTGGAGAAAACCTCGGATAAGGTTATTGCAG
CTGACTGCAAAAGGGTCACAGTGCTGAAGTATTTTCTGGAAGCCCTTTGTGGACAAGAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAGT
ATGTGTCAGTGGCACCCGTCCCAGACACCATGGGAAAGGAAATGGGAAGCCAAGAGGGAACACGACTGGAAGATGAGGAGGAGGATGTGG
TGATTGAAGACTTTGAGGAAGATTCAGAGGCTGAAGGCAGCGGAGGCGAGGATGACATCAGGGAGCTTCGGGCCAAGAAGCTGGCTCTGG
CCAGGAAGATAGCTGAGCAGCAGCGTCGCCAGGAAAAGATCCAGGCTGTCCTGGAGGACCACAGTCAGATGAGGCAGATGGAGCTCGAAA
TCAGACCTTTGTTCCTCGTACCAGACACCAACGGCTTCATTGACCACCTGGCCAGTCTGGCGCGGCTGCTGGAGAGCAGGAAGTACATCC
TGGTGGTGCCCCTCATCGTGATCAATGAGCTGGACGGCCTGGCCAAGGGGCAGGAGACAGACCACCGGGCTGGGGGCTACGCCCGTGTGG
TACAAGAGAAGGCCCGCAAGTCCATCGAGTTCCTCGAGCAGCGATTCGAGAGTCGGGACTCTTGCCTGCGAGCCCTGACCAGCCGTGGCA
ATGAACTCGAATCCATCGCCTTCCGCAGTGAGGACATCACTGGCCAGCTGGGTAACAACGATGATCTCATCCTGTCCTGCTGCCTCCACT
ACTGCAAAGACAAGGCTAAGGACTTCATGCCCGCCAGCAAAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACGGATGACC
GGAACCTGCGTGTGAAGGCGCTCACAAGGAATGTTCCTGTACGGGACATCCCAGCCTTCCTCACGTGGGCCCAGGTGGGCTGAGGGAGCC
ACACTGGGGCCCCCCCCCCGTGGAACCGTTCCTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCA
ATCCACCCAGACAATAAACCATCCTCTTCCAACCCACGCCACGGCCATGCTGTGGGGGACCTGCTCCTCACAGAGCCCCTCCCAAGGATC
GGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGATTTAGCAGGGAGGTGGCTGGCTACAGCAACAGCAGCTGGGCAAGCCAGATAGG
CCGCCCATGCTCTCAGCCTTTCTCCCTCCCCCGTCTCATTCCAAGGCTGAGGGAGGGCCTTCTCGCCTGGGGACGCAGCCACTTTCTCCA
GTGGAGACAGGGCAGGGGTTCTGAGTTTCCGTCAGATGCAGTGAAATCACAGTTCCCTTTCATCTTCAGAACCTCTGTCGTGAATGTGTT
CAAGAGGCTTTGGTTAAGTCAGGAAGAAGTGCCCAGGGTGTGTGTCCCCAGTCTCCCTGAGGCCTGGACTCGCCCATGAACCCAAGTCGG
CTTCTAGACAGCATGTCCCTAACAGCAGCCCTGGGCCCCCACCTCTTCTACCATCCACCCCAGACTTACCACACACCCTTCCTGCTGCTC
CTCTTCCTGCCCTTATCAACCTGGGTCCCTCACACTTCGCCAGTTGCGTCCCCGTGGACAGTCATGAGTCTAGAGGAAAGGGGCATCTGG
TCTCAGGCCCGTGCTCTCGGGTGGCCTCCACCTGCTCCCTCTCTCCTCACTGGCCTTTCTTTCCGTCTAGCTTCCTCTTCAGGAAATGTC
CTGACTCCCCTCAGCTCCCCCTTCACCCCTCCTTGCCCGCCTACCCTCCCTCCAGAATAGCCCCTCACCCTTCTTCCCCTTCTAGTTGAT
CCTTTTCACCTCCCTGATCCCCTTCATTTCTTCACCGCGGTTCCTCGTCATAGGGGTTCTCACTCTGAACTTTCCCTCTCTACTACCCAT
GGCAGGAACCTAGTACAGGTCTCCCACCCAGGGCCTTCCACCCTCGGCTCCTGTGCTGGGAGAAACTTCCAGGCGTGGACAGCCCAGCCT
GAGGCATTCCAGTGCTGGGGCACCGTCGCCTAACCTGGTTTCTAGCTTTGCCCTCACTCCCCGGAAAAACTGACACTGACACAGGGGCCC
TTTCCTTGCCCCTTTAGCTGGTACCTCAGTGGGGAGGCTTCCTTACCAAGAATGAGTTCCTGAAACCCAGGGCCAGAGACAAGGACAACT
TAGGGGAAGACGGGGTTTTCGGTGGAGCCAGGGGCAAATCTTAATGGGACCAGTGGGGGATACCCCAGAGCCCATGGCCTGACTGCACAG
CCTGCCTGGAGGATGGGTGCGCAGCTCTGCCCTCCCTGAGGCCCAGGACTATGCCAGAAGCGATGGGGTACCGTGTAGGGGAGCCAAGGC
CAGTAGTTTGGGGGTAGGAGTCCCCTAGAGTCTCAGAAGACTGGGCTCTTTGGAGTACAGGGTCCCCGGCCTCTCCTTTAAGATTCTCTC
CCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGAGACCCAGCTCTCCTTTCTGTCCCGTTTGCAGCACTGGTTTTGTTTCCTTAAT

>In-frame_ENST00000301335_ENST00000544865_TCGA-A8-A06Z-01A_SLC43A2_chr17_1516489_-_SMG6_chr17_2187029_length(amino acids)=807AA_start in transcript=89_stop in transcript=2512
MAPTLATAHRRRWWMACTAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGTVGGTAEPGHEEVSWMNGWLSCQAQDEMLNL
AFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCLLIAYGASKPNALSVLIFIALALNGFGGMCMTFTSLTRRKLDAVYYYMRS
LAASNPILTAKESLMSLFEETKRKAEQMEKKQHEEFDLSPDQWRKGKKSTFRHVGDDTTRLEIWIHPSHPRSSQGTESGKDSEQENGLGS
LSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEKVLKEFQVLLQHSPSPIGSTRMLQLMTINMFAVHNSQLKDCFSEECRSVIQEQAA
ALGLAMFSLLVRRCTCLLKESAKAQLSSPEDQDDQDDIKVSSFVPDLKELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSHVAVDVWSTLA
DFCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGK
YVSVAPVPDTMGKEMGSQEGTRLEDEEEDVVIEDFEEDSEAEGSGGEDDIRELRAKKLALARKIAEQQRRQEKIQAVLEDHSQMRQMELE
IRPLFLVPDTNGFIDHLASLARLLESRKYILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLEQRFESRDSCLRALTSRG

--------------------------------------------------------------
>In-frame_ENST00000301335_ENST00000263073_TCGA-A8-A06Z-01A_SLC43A2_chr17_1516489_-_SMG6_chr17_2187029_length(transcript)=4162nt_BP=590nt
AGAAAAGGCGCCGGGCGGGCCCGACACACGCCGGAGGAGCCGGGTGGTGCAGAGCCGGAGCCGGAGCCGGAGCCGCGCCGCGCCGCACCA
TGGCGCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTGGATGGCCTGCACGGCCGTGCTGGAGAACCTCCTCTTCTCGGCAGTCCTCC
TGGGCTGGGGCTCGCTGCTCATCATGCTCAAGTCAGAGGGCTTTTACTCCTACCTGTGTACCGAGCCAGAGAATGTCACCAATGGCACAG
TGGGCGGCACAGCAGAGCCGGGGCACGAGGAGGTGAGCTGGATGAACGGCTGGCTCAGCTGCCAGGCCCAGGACGAGATGCTAAATTTGG
CCTTCACTGTGGGCTCCTTTCTGCTCAGTGCCATCACCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAAGCTCAGGCTGC
TGGGCAGCGCCTGCTTCGCGGTTTCCTGCTTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGCTCATCTTCATCGCCC
TGGCTCTGAATGGCTTTGGTGGGATGTGTATGACCTTCACCTCATTAACAAGGAGGAAGCTTGACGCTGTCTATTACTATATGCGCAGTT
TAGCTGCCAGCAACCCTATCCTGACTGCCAAGGAGAGTCTCATGAGCTTGTTTGAAGAGACCAAGCGGAAGGCAGAACAGATGGAAAAGA
AGCAACATGAGGAATTTGACCTGAGCCCTGACCAGTGGCGGAAAGGAAAGAAGTCTACTTTCCGGCATGTTGGAGATGACACCACTCGCC
TGGAGATCTGGATTCATCCATCCCATCCACGGTCTTCCCAGGGCACTGAGTCTGGGAAGGATTCTGAGCAAGAGAATGGGCTGGGCAGCC
TGAGTCCCAGTGATCTGAACAAAAGGTTCATCCTCAGTTTTCTCCATGCCCATGGGAAGCTGTTTACCCGGATTGGGATGGAGACATTCC
CTGCAGTGGCTGAGAAGGTCCTCAAGGAGTTCCAGGTGTTACTGCAGCACAGCCCCTCTCCCATTGGAAGTACCCGCATGCTGCAGCTTA
TGACCATCAATATGTTTGCAGTACACAACTCCCAGCTGAAAGACTGCTTCTCGGAGGAGTGCCGCTCTGTGATCCAGGAACAAGCCGCAG
CTCTGGGCTTGGCCATGTTTTCTCTACTGGTCCGCCGCTGCACCTGCTTACTTAAGGAGTCCGCCAAAGCTCAGCTGTCCTCTCCTGAGG
ACCAGGATGACCAAGACGACATCAAGGTGTCTTCCTTTGTCCCGGACCTGAAGGAGCTGCTCCCCAGTGTCAAAGTCTGGTCAGATTGGA
TGCTCGGCTACCCGGACACCTGGAATCCTCCTCCCACATCCCTGGATCTGCCCTCGCATGTTGCTGTGGATGTATGGTCGACGCTGGCTG
ATTTCTGTAACATACTGACTGCAGTGAATCAGTCTGAGGTGCCACTGTACAAGGACCCGGATGATGACCTCACCCTTCTTATCCTGGAAG
AGGATCGGCTTCTCTCGGGCTTTGTCCCCTTGCTGGCTGCCCCTCAGGACCCCTGCTACGTGGAGAAAACCTCGGATAAGGTTATTGCAG
CTGACTGCAAAAGGGTCACAGTGCTGAAGTATTTTCTGGAAGCCCTTTGTGGACAAGAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAGT
ATGTGTCAGTGGCACCCGTCCCAGACACCATGGGAAAGGAAATGGGAAGCCAAGAGGGAACACGACTGGAAGATGAGGAGGAGGATGTGG
TGATTGAAGACTTTGAGGAAGATTCAGAGGCTGAAGGCAGCGGAGGCGAGGATGACATCAGGGAGCTTCGGGCCAAGAAGCTGGCTCTGG
CCAGGAAGATAGCTGAGCAGCAGCGTCGCCAGGAAAAGATCCAGGCTGTCCTGGAGGACCACAGTCAGATGAGGCAGATGGAGCTCGAAA
TCAGACCTTTGTTCCTCGTACCAGACACCAACGGCTTCATTGACCACCTGGCCAGTCTGGCGCGGCTGCTGGAGAGCAGGAAGTACATCC
TGGTGGTGCCCCTCATCGTGATCAATGAGCTGGACGGCCTGGCCAAGGGGCAGGAGACAGACCACCGGGCTGGGGGCTACGCCCGTGTGG
TACAAGAGAAGGCCCGCAAGTCCATCGAGTTCCTCGAGCAGCGATTCGAGAGTCGGGACTCTTGCCTGCGAGCCCTGACCAGCCGTGGCA
ATGAACTCGAATCCATCGCCTTCCGCAGTGAGGACATCACTGGCCAGCTGGGTAACAACGATGATCTCATCCTGTCCTGCTGCCTCCACT
ACTGCAAAGACAAGGCTAAGGACTTCATGCCCGCCAGCAAAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACGGATGACC
GGAACCTGCGTGTGAAGGCGCTCACAAGGAATGTTCCTGTACGGGACATCCCAGCCTTCCTCACGTGGGCCCAGGTGGGCTGAGGGAGCC
ACACTGGGGCCCCCCCCCCGTGGAACCGTTCCTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCA
ATCCACCCAGACAATAAACCATCCTCTTCCAACCCACGCCACGGCCATGCTGTGGGGGACCTGCTCCTCACAGAGCCCCTCCCAAGGATC
GGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGATTTAGCAGGGAGGTGGCTGGCTACAGCAACAGCAGCTGGGCAAGCCAGATAGG
CCGCCCATGCTCTCAGCCTTTCTCCCTCCCCCGTCTCATTCCAAGGCTGAGGGAGGGCCTTCTCGCCTGGGGACGCAGCCACTTTCTCCA
GTGGAGACAGGGCAGGGGTTCTGAGTTTCCGTCAGATGCAGTGAAATCACAGTTCCCTTTCATCTTCAGAACCTCTGTCGTGAATGTGTT
CAAGAGGCTTTGGTTAAGTCAGGAAGAAGTGCCCAGGGTGTGTGTCCCCAGTCTCCCTGAGGCCTGGACTCGCCCATGAACCCAAGTCGG
CTTCTAGACAGCATGTCCCTAACAGCAGCCCTGGGCCCCCACCTCTTCTACCATCCACCCCAGACTTACCACACACCCTTCCTGCTGCTC
CTCTTCCTGCCCTTATCAACCTGGGTCCCTCACACTTCGCCAGTTGCGTCCCCGTGGACAGTCATGAGTCTAGAGGAAAGGGGCATCTGG
TCTCAGGCCCGTGCTCTCGGGTGGCCTCCACCTGCTCCCTCTCTCCTCACTGGCCTTTCTTTCCGTCTAGCTTCCTCTTCAGGAAATGTC
CTGACTCCCCTCAGCTCCCCCTTCACCCCTCCTTGCCCGCCTACCCTCCCTCCAGAATAGCCCCTCACCCTTCTTCCCCTTCTAGTTGAT
CCTTTTCACCTCCCTGATCCCCTTCATTTCTTCACCGCGGTTCCTCGTCATAGGGGTTCTCACTCTGAACTTTCCCTCTCTACTACCCAT
GGCAGGAACCTAGTACAGGTCTCCCACCCAGGGCCTTCCACCCTCGGCTCCTGTGCTGGGAGAAACTTCCAGGCGTGGACAGCCCAGCCT
GAGGCATTCCAGTGCTGGGGCACCGTCGCCTAACCTGGTTTCTAGCTTTGCCCTCACTCCCCGGAAAAACTGACACTGACACAGGGGCCC
TTTCCTTGCCCCTTTAGCTGGTACCTCAGTGGGGAGGCTTCCTTACCAAGAATGAGTTCCTGAAACCCAGGGCCAGAGACAAGGACAACT
TAGGGGAAGACGGGGTTTTCGGTGGAGCCAGGGGCAAATCTTAATGGGACCAGTGGGGGATACCCCAGAGCCCATGGCCTGACTGCACAG
CCTGCCTGGAGGATGGGTGCGCAGCTCTGCCCTCCCTGAGGCCCAGGACTATGCCAGAAGCGATGGGGTACCGTGTAGGGGAGCCAAGGC
CAGTAGTTTGGGGGTAGGAGTCCCCTAGAGTCTCAGAAGACTGGGCTCTTTGGAGTACAGGGTCCCCGGCCTCTCCTTTAAGATTCTCTC
CCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGAGACCCAGCTCTCCTTTCTGTCCCGTTTGCAGCACTGGTTTTGTTTCCTTAAT

>In-frame_ENST00000301335_ENST00000263073_TCGA-A8-A06Z-01A_SLC43A2_chr17_1516489_-_SMG6_chr17_2187029_length(amino acids)=807AA_start in transcript=89_stop in transcript=2512
MAPTLATAHRRRWWMACTAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGTVGGTAEPGHEEVSWMNGWLSCQAQDEMLNL
AFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCLLIAYGASKPNALSVLIFIALALNGFGGMCMTFTSLTRRKLDAVYYYMRS
LAASNPILTAKESLMSLFEETKRKAEQMEKKQHEEFDLSPDQWRKGKKSTFRHVGDDTTRLEIWIHPSHPRSSQGTESGKDSEQENGLGS
LSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEKVLKEFQVLLQHSPSPIGSTRMLQLMTINMFAVHNSQLKDCFSEECRSVIQEQAA
ALGLAMFSLLVRRCTCLLKESAKAQLSSPEDQDDQDDIKVSSFVPDLKELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSHVAVDVWSTLA
DFCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGK
YVSVAPVPDTMGKEMGSQEGTRLEDEEEDVVIEDFEEDSEAEGSGGEDDIRELRAKKLALARKIAEQQRRQEKIQAVLEDHSQMRQMELE
IRPLFLVPDTNGFIDHLASLARLLESRKYILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLEQRFESRDSCLRALTSRG

--------------------------------------------------------------
>In-frame_ENST00000382147_ENST00000544865_TCGA-A8-A06Z-01A_SLC43A2_chr17_1516489_-_SMG6_chr17_2187029_length(transcript)=4166nt_BP=590nt
AGAAAAGGCGCCGGGCGGGCCCGACACACGCCGGAGGAGCCGGGTGGTGCAGAGCCGGAGCCGGAGCCGGAGCCGCGCCGCGCCGCACCA
TGGCGCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTGGATGGCCTGCACGGCCGTGCTGGAGAACCTCCTCTTCTCGGCAGTCCTCC
TGGGCTGGGGCTCGCTGCTCATCATGCTCAAGTCAGAGGGCTTTTACTCCTACCTGTGTACCGAGCCAGAGAATGTCACCAATGGCACAG
TGGGCGGCACAGCAGAGCCGGGGCACGAGGAGGTGAGCTGGATGAACGGCTGGCTCAGCTGCCAGGCCCAGGACGAGATGCTAAATTTGG
CCTTCACTGTGGGCTCCTTTCTGCTCAGTGCCATCACCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAAGCTCAGGCTGC
TGGGCAGCGCCTGCTTCGCGGTTTCCTGCTTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGCTCATCTTCATCGCCC
TGGCTCTGAATGGCTTTGGTGGGATGTGTATGACCTTCACCTCATTAACAAGGAGGAAGCTTGACGCTGTCTATTACTATATGCGCAGTT
TAGCTGCCAGCAACCCTATCCTGACTGCCAAGGAGAGTCTCATGAGCTTGTTTGAAGAGACCAAGCGGAAGGCAGAACAGATGGAAAAGA
AGCAACATGAGGAATTTGACCTGAGCCCTGACCAGTGGCGGAAAGGAAAGAAGTCTACTTTCCGGCATGTTGGAGATGACACCACTCGCC
TGGAGATCTGGATTCATCCATCCCATCCACGGTCTTCCCAGGGCACTGAGTCTGGGAAGGATTCTGAGCAAGAGAATGGGCTGGGCAGCC
TGAGTCCCAGTGATCTGAACAAAAGGTTCATCCTCAGTTTTCTCCATGCCCATGGGAAGCTGTTTACCCGGATTGGGATGGAGACATTCC
CTGCAGTGGCTGAGAAGGTCCTCAAGGAGTTCCAGGTGTTACTGCAGCACAGCCCCTCTCCCATTGGAAGTACCCGCATGCTGCAGCTTA
TGACCATCAATATGTTTGCAGTACACAACTCCCAGCTGAAAGACTGCTTCTCGGAGGAGTGCCGCTCTGTGATCCAGGAACAAGCCGCAG
CTCTGGGCTTGGCCATGTTTTCTCTACTGGTCCGCCGCTGCACCTGCTTACTTAAGGAGTCCGCCAAAGCTCAGCTGTCCTCTCCTGAGG
ACCAGGATGACCAAGACGACATCAAGGTGTCTTCCTTTGTCCCGGACCTGAAGGAGCTGCTCCCCAGTGTCAAAGTCTGGTCAGATTGGA
TGCTCGGCTACCCGGACACCTGGAATCCTCCTCCCACATCCCTGGATCTGCCCTCGCATGTTGCTGTGGATGTATGGTCGACGCTGGCTG
ATTTCTGTAACATACTGACTGCAGTGAATCAGTCTGAGGTGCCACTGTACAAGGACCCGGATGATGACCTCACCCTTCTTATCCTGGAAG
AGGATCGGCTTCTCTCGGGCTTTGTCCCCTTGCTGGCTGCCCCTCAGGACCCCTGCTACGTGGAGAAAACCTCGGATAAGGTTATTGCAG
CTGACTGCAAAAGGGTCACAGTGCTGAAGTATTTTCTGGAAGCCCTTTGTGGACAAGAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAGT
ATGTGTCAGTGGCACCCGTCCCAGACACCATGGGAAAGGAAATGGGAAGCCAAGAGGGAACACGACTGGAAGATGAGGAGGAGGATGTGG
TGATTGAAGACTTTGAGGAAGATTCAGAGGCTGAAGGCAGCGGAGGCGAGGATGACATCAGGGAGCTTCGGGCCAAGAAGCTGGCTCTGG
CCAGGAAGATAGCTGAGCAGCAGCGTCGCCAGGAAAAGATCCAGGCTGTCCTGGAGGACCACAGTCAGATGAGGCAGATGGAGCTCGAAA
TCAGACCTTTGTTCCTCGTACCAGACACCAACGGCTTCATTGACCACCTGGCCAGTCTGGCGCGGCTGCTGGAGAGCAGGAAGTACATCC
TGGTGGTGCCCCTCATCGTGATCAATGAGCTGGACGGCCTGGCCAAGGGGCAGGAGACAGACCACCGGGCTGGGGGCTACGCCCGTGTGG
TACAAGAGAAGGCCCGCAAGTCCATCGAGTTCCTCGAGCAGCGATTCGAGAGTCGGGACTCTTGCCTGCGAGCCCTGACCAGCCGTGGCA
ATGAACTCGAATCCATCGCCTTCCGCAGTGAGGACATCACTGGCCAGCTGGGTAACAACGATGATCTCATCCTGTCCTGCTGCCTCCACT
ACTGCAAAGACAAGGCTAAGGACTTCATGCCCGCCAGCAAAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACGGATGACC
GGAACCTGCGTGTGAAGGCGCTCACAAGGAATGTTCCTGTACGGGACATCCCAGCCTTCCTCACGTGGGCCCAGGTGGGCTGAGGGAGCC
ACACTGGGGCCCCCCCCCCGTGGAACCGTTCCTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCA
ATCCACCCAGACAATAAACCATCCTCTTCCAACCCACGCCACGGCCATGCTGTGGGGGACCTGCTCCTCACAGAGCCCCTCCCAAGGATC
GGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGATTTAGCAGGGAGGTGGCTGGCTACAGCAACAGCAGCTGGGCAAGCCAGATAGG
CCGCCCATGCTCTCAGCCTTTCTCCCTCCCCCGTCTCATTCCAAGGCTGAGGGAGGGCCTTCTCGCCTGGGGACGCAGCCACTTTCTCCA
GTGGAGACAGGGCAGGGGTTCTGAGTTTCCGTCAGATGCAGTGAAATCACAGTTCCCTTTCATCTTCAGAACCTCTGTCGTGAATGTGTT
CAAGAGGCTTTGGTTAAGTCAGGAAGAAGTGCCCAGGGTGTGTGTCCCCAGTCTCCCTGAGGCCTGGACTCGCCCATGAACCCAAGTCGG
CTTCTAGACAGCATGTCCCTAACAGCAGCCCTGGGCCCCCACCTCTTCTACCATCCACCCCAGACTTACCACACACCCTTCCTGCTGCTC
CTCTTCCTGCCCTTATCAACCTGGGTCCCTCACACTTCGCCAGTTGCGTCCCCGTGGACAGTCATGAGTCTAGAGGAAAGGGGCATCTGG
TCTCAGGCCCGTGCTCTCGGGTGGCCTCCACCTGCTCCCTCTCTCCTCACTGGCCTTTCTTTCCGTCTAGCTTCCTCTTCAGGAAATGTC
CTGACTCCCCTCAGCTCCCCCTTCACCCCTCCTTGCCCGCCTACCCTCCCTCCAGAATAGCCCCTCACCCTTCTTCCCCTTCTAGTTGAT
CCTTTTCACCTCCCTGATCCCCTTCATTTCTTCACCGCGGTTCCTCGTCATAGGGGTTCTCACTCTGAACTTTCCCTCTCTACTACCCAT
GGCAGGAACCTAGTACAGGTCTCCCACCCAGGGCCTTCCACCCTCGGCTCCTGTGCTGGGAGAAACTTCCAGGCGTGGACAGCCCAGCCT
GAGGCATTCCAGTGCTGGGGCACCGTCGCCTAACCTGGTTTCTAGCTTTGCCCTCACTCCCCGGAAAAACTGACACTGACACAGGGGCCC
TTTCCTTGCCCCTTTAGCTGGTACCTCAGTGGGGAGGCTTCCTTACCAAGAATGAGTTCCTGAAACCCAGGGCCAGAGACAAGGACAACT
TAGGGGAAGACGGGGTTTTCGGTGGAGCCAGGGGCAAATCTTAATGGGACCAGTGGGGGATACCCCAGAGCCCATGGCCTGACTGCACAG
CCTGCCTGGAGGATGGGTGCGCAGCTCTGCCCTCCCTGAGGCCCAGGACTATGCCAGAAGCGATGGGGTACCGTGTAGGGGAGCCAAGGC
CAGTAGTTTGGGGGTAGGAGTCCCCTAGAGTCTCAGAAGACTGGGCTCTTTGGAGTACAGGGTCCCCGGCCTCTCCTTTAAGATTCTCTC
CCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGAGACCCAGCTCTCCTTTCTGTCCCGTTTGCAGCACTGGTTTTGTTTCCTTAAT

>In-frame_ENST00000382147_ENST00000544865_TCGA-A8-A06Z-01A_SLC43A2_chr17_1516489_-_SMG6_chr17_2187029_length(amino acids)=807AA_start in transcript=89_stop in transcript=2512
MAPTLATAHRRRWWMACTAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGTVGGTAEPGHEEVSWMNGWLSCQAQDEMLNL
AFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCLLIAYGASKPNALSVLIFIALALNGFGGMCMTFTSLTRRKLDAVYYYMRS
LAASNPILTAKESLMSLFEETKRKAEQMEKKQHEEFDLSPDQWRKGKKSTFRHVGDDTTRLEIWIHPSHPRSSQGTESGKDSEQENGLGS
LSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEKVLKEFQVLLQHSPSPIGSTRMLQLMTINMFAVHNSQLKDCFSEECRSVIQEQAA
ALGLAMFSLLVRRCTCLLKESAKAQLSSPEDQDDQDDIKVSSFVPDLKELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSHVAVDVWSTLA
DFCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGK
YVSVAPVPDTMGKEMGSQEGTRLEDEEEDVVIEDFEEDSEAEGSGGEDDIRELRAKKLALARKIAEQQRRQEKIQAVLEDHSQMRQMELE
IRPLFLVPDTNGFIDHLASLARLLESRKYILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLEQRFESRDSCLRALTSRG

--------------------------------------------------------------
>In-frame_ENST00000382147_ENST00000263073_TCGA-A8-A06Z-01A_SLC43A2_chr17_1516489_-_SMG6_chr17_2187029_length(transcript)=4162nt_BP=590nt
AGAAAAGGCGCCGGGCGGGCCCGACACACGCCGGAGGAGCCGGGTGGTGCAGAGCCGGAGCCGGAGCCGGAGCCGCGCCGCGCCGCACCA
TGGCGCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTGGATGGCCTGCACGGCCGTGCTGGAGAACCTCCTCTTCTCGGCAGTCCTCC
TGGGCTGGGGCTCGCTGCTCATCATGCTCAAGTCAGAGGGCTTTTACTCCTACCTGTGTACCGAGCCAGAGAATGTCACCAATGGCACAG
TGGGCGGCACAGCAGAGCCGGGGCACGAGGAGGTGAGCTGGATGAACGGCTGGCTCAGCTGCCAGGCCCAGGACGAGATGCTAAATTTGG
CCTTCACTGTGGGCTCCTTTCTGCTCAGTGCCATCACCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAAGCTCAGGCTGC
TGGGCAGCGCCTGCTTCGCGGTTTCCTGCTTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGCTCATCTTCATCGCCC
TGGCTCTGAATGGCTTTGGTGGGATGTGTATGACCTTCACCTCATTAACAAGGAGGAAGCTTGACGCTGTCTATTACTATATGCGCAGTT
TAGCTGCCAGCAACCCTATCCTGACTGCCAAGGAGAGTCTCATGAGCTTGTTTGAAGAGACCAAGCGGAAGGCAGAACAGATGGAAAAGA
AGCAACATGAGGAATTTGACCTGAGCCCTGACCAGTGGCGGAAAGGAAAGAAGTCTACTTTCCGGCATGTTGGAGATGACACCACTCGCC
TGGAGATCTGGATTCATCCATCCCATCCACGGTCTTCCCAGGGCACTGAGTCTGGGAAGGATTCTGAGCAAGAGAATGGGCTGGGCAGCC
TGAGTCCCAGTGATCTGAACAAAAGGTTCATCCTCAGTTTTCTCCATGCCCATGGGAAGCTGTTTACCCGGATTGGGATGGAGACATTCC
CTGCAGTGGCTGAGAAGGTCCTCAAGGAGTTCCAGGTGTTACTGCAGCACAGCCCCTCTCCCATTGGAAGTACCCGCATGCTGCAGCTTA
TGACCATCAATATGTTTGCAGTACACAACTCCCAGCTGAAAGACTGCTTCTCGGAGGAGTGCCGCTCTGTGATCCAGGAACAAGCCGCAG
CTCTGGGCTTGGCCATGTTTTCTCTACTGGTCCGCCGCTGCACCTGCTTACTTAAGGAGTCCGCCAAAGCTCAGCTGTCCTCTCCTGAGG
ACCAGGATGACCAAGACGACATCAAGGTGTCTTCCTTTGTCCCGGACCTGAAGGAGCTGCTCCCCAGTGTCAAAGTCTGGTCAGATTGGA
TGCTCGGCTACCCGGACACCTGGAATCCTCCTCCCACATCCCTGGATCTGCCCTCGCATGTTGCTGTGGATGTATGGTCGACGCTGGCTG
ATTTCTGTAACATACTGACTGCAGTGAATCAGTCTGAGGTGCCACTGTACAAGGACCCGGATGATGACCTCACCCTTCTTATCCTGGAAG
AGGATCGGCTTCTCTCGGGCTTTGTCCCCTTGCTGGCTGCCCCTCAGGACCCCTGCTACGTGGAGAAAACCTCGGATAAGGTTATTGCAG
CTGACTGCAAAAGGGTCACAGTGCTGAAGTATTTTCTGGAAGCCCTTTGTGGACAAGAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAGT
ATGTGTCAGTGGCACCCGTCCCAGACACCATGGGAAAGGAAATGGGAAGCCAAGAGGGAACACGACTGGAAGATGAGGAGGAGGATGTGG
TGATTGAAGACTTTGAGGAAGATTCAGAGGCTGAAGGCAGCGGAGGCGAGGATGACATCAGGGAGCTTCGGGCCAAGAAGCTGGCTCTGG
CCAGGAAGATAGCTGAGCAGCAGCGTCGCCAGGAAAAGATCCAGGCTGTCCTGGAGGACCACAGTCAGATGAGGCAGATGGAGCTCGAAA
TCAGACCTTTGTTCCTCGTACCAGACACCAACGGCTTCATTGACCACCTGGCCAGTCTGGCGCGGCTGCTGGAGAGCAGGAAGTACATCC
TGGTGGTGCCCCTCATCGTGATCAATGAGCTGGACGGCCTGGCCAAGGGGCAGGAGACAGACCACCGGGCTGGGGGCTACGCCCGTGTGG
TACAAGAGAAGGCCCGCAAGTCCATCGAGTTCCTCGAGCAGCGATTCGAGAGTCGGGACTCTTGCCTGCGAGCCCTGACCAGCCGTGGCA
ATGAACTCGAATCCATCGCCTTCCGCAGTGAGGACATCACTGGCCAGCTGGGTAACAACGATGATCTCATCCTGTCCTGCTGCCTCCACT
ACTGCAAAGACAAGGCTAAGGACTTCATGCCCGCCAGCAAAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACGGATGACC
GGAACCTGCGTGTGAAGGCGCTCACAAGGAATGTTCCTGTACGGGACATCCCAGCCTTCCTCACGTGGGCCCAGGTGGGCTGAGGGAGCC
ACACTGGGGCCCCCCCCCCGTGGAACCGTTCCTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCA
ATCCACCCAGACAATAAACCATCCTCTTCCAACCCACGCCACGGCCATGCTGTGGGGGACCTGCTCCTCACAGAGCCCCTCCCAAGGATC
GGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGATTTAGCAGGGAGGTGGCTGGCTACAGCAACAGCAGCTGGGCAAGCCAGATAGG
CCGCCCATGCTCTCAGCCTTTCTCCCTCCCCCGTCTCATTCCAAGGCTGAGGGAGGGCCTTCTCGCCTGGGGACGCAGCCACTTTCTCCA
GTGGAGACAGGGCAGGGGTTCTGAGTTTCCGTCAGATGCAGTGAAATCACAGTTCCCTTTCATCTTCAGAACCTCTGTCGTGAATGTGTT
CAAGAGGCTTTGGTTAAGTCAGGAAGAAGTGCCCAGGGTGTGTGTCCCCAGTCTCCCTGAGGCCTGGACTCGCCCATGAACCCAAGTCGG
CTTCTAGACAGCATGTCCCTAACAGCAGCCCTGGGCCCCCACCTCTTCTACCATCCACCCCAGACTTACCACACACCCTTCCTGCTGCTC
CTCTTCCTGCCCTTATCAACCTGGGTCCCTCACACTTCGCCAGTTGCGTCCCCGTGGACAGTCATGAGTCTAGAGGAAAGGGGCATCTGG
TCTCAGGCCCGTGCTCTCGGGTGGCCTCCACCTGCTCCCTCTCTCCTCACTGGCCTTTCTTTCCGTCTAGCTTCCTCTTCAGGAAATGTC
CTGACTCCCCTCAGCTCCCCCTTCACCCCTCCTTGCCCGCCTACCCTCCCTCCAGAATAGCCCCTCACCCTTCTTCCCCTTCTAGTTGAT
CCTTTTCACCTCCCTGATCCCCTTCATTTCTTCACCGCGGTTCCTCGTCATAGGGGTTCTCACTCTGAACTTTCCCTCTCTACTACCCAT
GGCAGGAACCTAGTACAGGTCTCCCACCCAGGGCCTTCCACCCTCGGCTCCTGTGCTGGGAGAAACTTCCAGGCGTGGACAGCCCAGCCT
GAGGCATTCCAGTGCTGGGGCACCGTCGCCTAACCTGGTTTCTAGCTTTGCCCTCACTCCCCGGAAAAACTGACACTGACACAGGGGCCC
TTTCCTTGCCCCTTTAGCTGGTACCTCAGTGGGGAGGCTTCCTTACCAAGAATGAGTTCCTGAAACCCAGGGCCAGAGACAAGGACAACT
TAGGGGAAGACGGGGTTTTCGGTGGAGCCAGGGGCAAATCTTAATGGGACCAGTGGGGGATACCCCAGAGCCCATGGCCTGACTGCACAG
CCTGCCTGGAGGATGGGTGCGCAGCTCTGCCCTCCCTGAGGCCCAGGACTATGCCAGAAGCGATGGGGTACCGTGTAGGGGAGCCAAGGC
CAGTAGTTTGGGGGTAGGAGTCCCCTAGAGTCTCAGAAGACTGGGCTCTTTGGAGTACAGGGTCCCCGGCCTCTCCTTTAAGATTCTCTC
CCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGAGACCCAGCTCTCCTTTCTGTCCCGTTTGCAGCACTGGTTTTGTTTCCTTAAT

>In-frame_ENST00000382147_ENST00000263073_TCGA-A8-A06Z-01A_SLC43A2_chr17_1516489_-_SMG6_chr17_2187029_length(amino acids)=807AA_start in transcript=89_stop in transcript=2512
MAPTLATAHRRRWWMACTAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGTVGGTAEPGHEEVSWMNGWLSCQAQDEMLNL
AFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCLLIAYGASKPNALSVLIFIALALNGFGGMCMTFTSLTRRKLDAVYYYMRS
LAASNPILTAKESLMSLFEETKRKAEQMEKKQHEEFDLSPDQWRKGKKSTFRHVGDDTTRLEIWIHPSHPRSSQGTESGKDSEQENGLGS
LSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEKVLKEFQVLLQHSPSPIGSTRMLQLMTINMFAVHNSQLKDCFSEECRSVIQEQAA
ALGLAMFSLLVRRCTCLLKESAKAQLSSPEDQDDQDDIKVSSFVPDLKELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSHVAVDVWSTLA
DFCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGK
YVSVAPVPDTMGKEMGSQEGTRLEDEEEDVVIEDFEEDSEAEGSGGEDDIRELRAKKLALARKIAEQQRRQEKIQAVLEDHSQMRQMELE
IRPLFLVPDTNGFIDHLASLARLLESRKYILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLEQRFESRDSCLRALTSRG

--------------------------------------------------------------
>In-frame_ENST00000301335_ENST00000544865_TCGA-A8-A06Z_SLC43A2_chr17_1516488_-_SMG6_chr17_2187029_length(transcript)=4166nt_BP=590nt
AGAAAAGGCGCCGGGCGGGCCCGACACACGCCGGAGGAGCCGGGTGGTGCAGAGCCGGAGCCGGAGCCGGAGCCGCGCCGCGCCGCACCA
TGGCGCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTGGATGGCCTGCACGGCCGTGCTGGAGAACCTCCTCTTCTCGGCAGTCCTCC
TGGGCTGGGGCTCGCTGCTCATCATGCTCAAGTCAGAGGGCTTTTACTCCTACCTGTGTACCGAGCCAGAGAATGTCACCAATGGCACAG
TGGGCGGCACAGCAGAGCCGGGGCACGAGGAGGTGAGCTGGATGAACGGCTGGCTCAGCTGCCAGGCCCAGGACGAGATGCTAAATTTGG
CCTTCACTGTGGGCTCCTTTCTGCTCAGTGCCATCACCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAAGCTCAGGCTGC
TGGGCAGCGCCTGCTTCGCGGTTTCCTGCTTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGCTCATCTTCATCGCCC
TGGCTCTGAATGGCTTTGGTGGGATGTGTATGACCTTCACCTCATTAACAAGGAGGAAGCTTGACGCTGTCTATTACTATATGCGCAGTT
TAGCTGCCAGCAACCCTATCCTGACTGCCAAGGAGAGTCTCATGAGCTTGTTTGAAGAGACCAAGCGGAAGGCAGAACAGATGGAAAAGA
AGCAACATGAGGAATTTGACCTGAGCCCTGACCAGTGGCGGAAAGGAAAGAAGTCTACTTTCCGGCATGTTGGAGATGACACCACTCGCC
TGGAGATCTGGATTCATCCATCCCATCCACGGTCTTCCCAGGGCACTGAGTCTGGGAAGGATTCTGAGCAAGAGAATGGGCTGGGCAGCC
TGAGTCCCAGTGATCTGAACAAAAGGTTCATCCTCAGTTTTCTCCATGCCCATGGGAAGCTGTTTACCCGGATTGGGATGGAGACATTCC
CTGCAGTGGCTGAGAAGGTCCTCAAGGAGTTCCAGGTGTTACTGCAGCACAGCCCCTCTCCCATTGGAAGTACCCGCATGCTGCAGCTTA
TGACCATCAATATGTTTGCAGTACACAACTCCCAGCTGAAAGACTGCTTCTCGGAGGAGTGCCGCTCTGTGATCCAGGAACAAGCCGCAG
CTCTGGGCTTGGCCATGTTTTCTCTACTGGTCCGCCGCTGCACCTGCTTACTTAAGGAGTCCGCCAAAGCTCAGCTGTCCTCTCCTGAGG
ACCAGGATGACCAAGACGACATCAAGGTGTCTTCCTTTGTCCCGGACCTGAAGGAGCTGCTCCCCAGTGTCAAAGTCTGGTCAGATTGGA
TGCTCGGCTACCCGGACACCTGGAATCCTCCTCCCACATCCCTGGATCTGCCCTCGCATGTTGCTGTGGATGTATGGTCGACGCTGGCTG
ATTTCTGTAACATACTGACTGCAGTGAATCAGTCTGAGGTGCCACTGTACAAGGACCCGGATGATGACCTCACCCTTCTTATCCTGGAAG
AGGATCGGCTTCTCTCGGGCTTTGTCCCCTTGCTGGCTGCCCCTCAGGACCCCTGCTACGTGGAGAAAACCTCGGATAAGGTTATTGCAG
CTGACTGCAAAAGGGTCACAGTGCTGAAGTATTTTCTGGAAGCCCTTTGTGGACAAGAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAGT
ATGTGTCAGTGGCACCCGTCCCAGACACCATGGGAAAGGAAATGGGAAGCCAAGAGGGAACACGACTGGAAGATGAGGAGGAGGATGTGG
TGATTGAAGACTTTGAGGAAGATTCAGAGGCTGAAGGCAGCGGAGGCGAGGATGACATCAGGGAGCTTCGGGCCAAGAAGCTGGCTCTGG
CCAGGAAGATAGCTGAGCAGCAGCGTCGCCAGGAAAAGATCCAGGCTGTCCTGGAGGACCACAGTCAGATGAGGCAGATGGAGCTCGAAA
TCAGACCTTTGTTCCTCGTACCAGACACCAACGGCTTCATTGACCACCTGGCCAGTCTGGCGCGGCTGCTGGAGAGCAGGAAGTACATCC
TGGTGGTGCCCCTCATCGTGATCAATGAGCTGGACGGCCTGGCCAAGGGGCAGGAGACAGACCACCGGGCTGGGGGCTACGCCCGTGTGG
TACAAGAGAAGGCCCGCAAGTCCATCGAGTTCCTCGAGCAGCGATTCGAGAGTCGGGACTCTTGCCTGCGAGCCCTGACCAGCCGTGGCA
ATGAACTCGAATCCATCGCCTTCCGCAGTGAGGACATCACTGGCCAGCTGGGTAACAACGATGATCTCATCCTGTCCTGCTGCCTCCACT
ACTGCAAAGACAAGGCTAAGGACTTCATGCCCGCCAGCAAAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACGGATGACC
GGAACCTGCGTGTGAAGGCGCTCACAAGGAATGTTCCTGTACGGGACATCCCAGCCTTCCTCACGTGGGCCCAGGTGGGCTGAGGGAGCC
ACACTGGGGCCCCCCCCCCGTGGAACCGTTCCTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCA
ATCCACCCAGACAATAAACCATCCTCTTCCAACCCACGCCACGGCCATGCTGTGGGGGACCTGCTCCTCACAGAGCCCCTCCCAAGGATC
GGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGATTTAGCAGGGAGGTGGCTGGCTACAGCAACAGCAGCTGGGCAAGCCAGATAGG
CCGCCCATGCTCTCAGCCTTTCTCCCTCCCCCGTCTCATTCCAAGGCTGAGGGAGGGCCTTCTCGCCTGGGGACGCAGCCACTTTCTCCA
GTGGAGACAGGGCAGGGGTTCTGAGTTTCCGTCAGATGCAGTGAAATCACAGTTCCCTTTCATCTTCAGAACCTCTGTCGTGAATGTGTT
CAAGAGGCTTTGGTTAAGTCAGGAAGAAGTGCCCAGGGTGTGTGTCCCCAGTCTCCCTGAGGCCTGGACTCGCCCATGAACCCAAGTCGG
CTTCTAGACAGCATGTCCCTAACAGCAGCCCTGGGCCCCCACCTCTTCTACCATCCACCCCAGACTTACCACACACCCTTCCTGCTGCTC
CTCTTCCTGCCCTTATCAACCTGGGTCCCTCACACTTCGCCAGTTGCGTCCCCGTGGACAGTCATGAGTCTAGAGGAAAGGGGCATCTGG
TCTCAGGCCCGTGCTCTCGGGTGGCCTCCACCTGCTCCCTCTCTCCTCACTGGCCTTTCTTTCCGTCTAGCTTCCTCTTCAGGAAATGTC
CTGACTCCCCTCAGCTCCCCCTTCACCCCTCCTTGCCCGCCTACCCTCCCTCCAGAATAGCCCCTCACCCTTCTTCCCCTTCTAGTTGAT
CCTTTTCACCTCCCTGATCCCCTTCATTTCTTCACCGCGGTTCCTCGTCATAGGGGTTCTCACTCTGAACTTTCCCTCTCTACTACCCAT
GGCAGGAACCTAGTACAGGTCTCCCACCCAGGGCCTTCCACCCTCGGCTCCTGTGCTGGGAGAAACTTCCAGGCGTGGACAGCCCAGCCT
GAGGCATTCCAGTGCTGGGGCACCGTCGCCTAACCTGGTTTCTAGCTTTGCCCTCACTCCCCGGAAAAACTGACACTGACACAGGGGCCC
TTTCCTTGCCCCTTTAGCTGGTACCTCAGTGGGGAGGCTTCCTTACCAAGAATGAGTTCCTGAAACCCAGGGCCAGAGACAAGGACAACT
TAGGGGAAGACGGGGTTTTCGGTGGAGCCAGGGGCAAATCTTAATGGGACCAGTGGGGGATACCCCAGAGCCCATGGCCTGACTGCACAG
CCTGCCTGGAGGATGGGTGCGCAGCTCTGCCCTCCCTGAGGCCCAGGACTATGCCAGAAGCGATGGGGTACCGTGTAGGGGAGCCAAGGC
CAGTAGTTTGGGGGTAGGAGTCCCCTAGAGTCTCAGAAGACTGGGCTCTTTGGAGTACAGGGTCCCCGGCCTCTCCTTTAAGATTCTCTC
CCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGAGACCCAGCTCTCCTTTCTGTCCCGTTTGCAGCACTGGTTTTGTTTCCTTAAT

>In-frame_ENST00000301335_ENST00000544865_TCGA-A8-A06Z_SLC43A2_chr17_1516488_-_SMG6_chr17_2187029_length(amino acids)=807AA_start in transcript=89_stop in transcript=2512
MAPTLATAHRRRWWMACTAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGTVGGTAEPGHEEVSWMNGWLSCQAQDEMLNL
AFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCLLIAYGASKPNALSVLIFIALALNGFGGMCMTFTSLTRRKLDAVYYYMRS
LAASNPILTAKESLMSLFEETKRKAEQMEKKQHEEFDLSPDQWRKGKKSTFRHVGDDTTRLEIWIHPSHPRSSQGTESGKDSEQENGLGS
LSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEKVLKEFQVLLQHSPSPIGSTRMLQLMTINMFAVHNSQLKDCFSEECRSVIQEQAA
ALGLAMFSLLVRRCTCLLKESAKAQLSSPEDQDDQDDIKVSSFVPDLKELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSHVAVDVWSTLA
DFCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGK
YVSVAPVPDTMGKEMGSQEGTRLEDEEEDVVIEDFEEDSEAEGSGGEDDIRELRAKKLALARKIAEQQRRQEKIQAVLEDHSQMRQMELE
IRPLFLVPDTNGFIDHLASLARLLESRKYILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLEQRFESRDSCLRALTSRG

--------------------------------------------------------------
>In-frame_ENST00000301335_ENST00000263073_TCGA-A8-A06Z_SLC43A2_chr17_1516488_-_SMG6_chr17_2187029_length(transcript)=4162nt_BP=590nt
AGAAAAGGCGCCGGGCGGGCCCGACACACGCCGGAGGAGCCGGGTGGTGCAGAGCCGGAGCCGGAGCCGGAGCCGCGCCGCGCCGCACCA
TGGCGCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTGGATGGCCTGCACGGCCGTGCTGGAGAACCTCCTCTTCTCGGCAGTCCTCC
TGGGCTGGGGCTCGCTGCTCATCATGCTCAAGTCAGAGGGCTTTTACTCCTACCTGTGTACCGAGCCAGAGAATGTCACCAATGGCACAG
TGGGCGGCACAGCAGAGCCGGGGCACGAGGAGGTGAGCTGGATGAACGGCTGGCTCAGCTGCCAGGCCCAGGACGAGATGCTAAATTTGG
CCTTCACTGTGGGCTCCTTTCTGCTCAGTGCCATCACCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAAGCTCAGGCTGC
TGGGCAGCGCCTGCTTCGCGGTTTCCTGCTTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGCTCATCTTCATCGCCC
TGGCTCTGAATGGCTTTGGTGGGATGTGTATGACCTTCACCTCATTAACAAGGAGGAAGCTTGACGCTGTCTATTACTATATGCGCAGTT
TAGCTGCCAGCAACCCTATCCTGACTGCCAAGGAGAGTCTCATGAGCTTGTTTGAAGAGACCAAGCGGAAGGCAGAACAGATGGAAAAGA
AGCAACATGAGGAATTTGACCTGAGCCCTGACCAGTGGCGGAAAGGAAAGAAGTCTACTTTCCGGCATGTTGGAGATGACACCACTCGCC
TGGAGATCTGGATTCATCCATCCCATCCACGGTCTTCCCAGGGCACTGAGTCTGGGAAGGATTCTGAGCAAGAGAATGGGCTGGGCAGCC
TGAGTCCCAGTGATCTGAACAAAAGGTTCATCCTCAGTTTTCTCCATGCCCATGGGAAGCTGTTTACCCGGATTGGGATGGAGACATTCC
CTGCAGTGGCTGAGAAGGTCCTCAAGGAGTTCCAGGTGTTACTGCAGCACAGCCCCTCTCCCATTGGAAGTACCCGCATGCTGCAGCTTA
TGACCATCAATATGTTTGCAGTACACAACTCCCAGCTGAAAGACTGCTTCTCGGAGGAGTGCCGCTCTGTGATCCAGGAACAAGCCGCAG
CTCTGGGCTTGGCCATGTTTTCTCTACTGGTCCGCCGCTGCACCTGCTTACTTAAGGAGTCCGCCAAAGCTCAGCTGTCCTCTCCTGAGG
ACCAGGATGACCAAGACGACATCAAGGTGTCTTCCTTTGTCCCGGACCTGAAGGAGCTGCTCCCCAGTGTCAAAGTCTGGTCAGATTGGA
TGCTCGGCTACCCGGACACCTGGAATCCTCCTCCCACATCCCTGGATCTGCCCTCGCATGTTGCTGTGGATGTATGGTCGACGCTGGCTG
ATTTCTGTAACATACTGACTGCAGTGAATCAGTCTGAGGTGCCACTGTACAAGGACCCGGATGATGACCTCACCCTTCTTATCCTGGAAG
AGGATCGGCTTCTCTCGGGCTTTGTCCCCTTGCTGGCTGCCCCTCAGGACCCCTGCTACGTGGAGAAAACCTCGGATAAGGTTATTGCAG
CTGACTGCAAAAGGGTCACAGTGCTGAAGTATTTTCTGGAAGCCCTTTGTGGACAAGAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAGT
ATGTGTCAGTGGCACCCGTCCCAGACACCATGGGAAAGGAAATGGGAAGCCAAGAGGGAACACGACTGGAAGATGAGGAGGAGGATGTGG
TGATTGAAGACTTTGAGGAAGATTCAGAGGCTGAAGGCAGCGGAGGCGAGGATGACATCAGGGAGCTTCGGGCCAAGAAGCTGGCTCTGG
CCAGGAAGATAGCTGAGCAGCAGCGTCGCCAGGAAAAGATCCAGGCTGTCCTGGAGGACCACAGTCAGATGAGGCAGATGGAGCTCGAAA
TCAGACCTTTGTTCCTCGTACCAGACACCAACGGCTTCATTGACCACCTGGCCAGTCTGGCGCGGCTGCTGGAGAGCAGGAAGTACATCC
TGGTGGTGCCCCTCATCGTGATCAATGAGCTGGACGGCCTGGCCAAGGGGCAGGAGACAGACCACCGGGCTGGGGGCTACGCCCGTGTGG
TACAAGAGAAGGCCCGCAAGTCCATCGAGTTCCTCGAGCAGCGATTCGAGAGTCGGGACTCTTGCCTGCGAGCCCTGACCAGCCGTGGCA
ATGAACTCGAATCCATCGCCTTCCGCAGTGAGGACATCACTGGCCAGCTGGGTAACAACGATGATCTCATCCTGTCCTGCTGCCTCCACT
ACTGCAAAGACAAGGCTAAGGACTTCATGCCCGCCAGCAAAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACGGATGACC
GGAACCTGCGTGTGAAGGCGCTCACAAGGAATGTTCCTGTACGGGACATCCCAGCCTTCCTCACGTGGGCCCAGGTGGGCTGAGGGAGCC
ACACTGGGGCCCCCCCCCCGTGGAACCGTTCCTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCA
ATCCACCCAGACAATAAACCATCCTCTTCCAACCCACGCCACGGCCATGCTGTGGGGGACCTGCTCCTCACAGAGCCCCTCCCAAGGATC
GGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGATTTAGCAGGGAGGTGGCTGGCTACAGCAACAGCAGCTGGGCAAGCCAGATAGG
CCGCCCATGCTCTCAGCCTTTCTCCCTCCCCCGTCTCATTCCAAGGCTGAGGGAGGGCCTTCTCGCCTGGGGACGCAGCCACTTTCTCCA
GTGGAGACAGGGCAGGGGTTCTGAGTTTCCGTCAGATGCAGTGAAATCACAGTTCCCTTTCATCTTCAGAACCTCTGTCGTGAATGTGTT
CAAGAGGCTTTGGTTAAGTCAGGAAGAAGTGCCCAGGGTGTGTGTCCCCAGTCTCCCTGAGGCCTGGACTCGCCCATGAACCCAAGTCGG
CTTCTAGACAGCATGTCCCTAACAGCAGCCCTGGGCCCCCACCTCTTCTACCATCCACCCCAGACTTACCACACACCCTTCCTGCTGCTC
CTCTTCCTGCCCTTATCAACCTGGGTCCCTCACACTTCGCCAGTTGCGTCCCCGTGGACAGTCATGAGTCTAGAGGAAAGGGGCATCTGG
TCTCAGGCCCGTGCTCTCGGGTGGCCTCCACCTGCTCCCTCTCTCCTCACTGGCCTTTCTTTCCGTCTAGCTTCCTCTTCAGGAAATGTC
CTGACTCCCCTCAGCTCCCCCTTCACCCCTCCTTGCCCGCCTACCCTCCCTCCAGAATAGCCCCTCACCCTTCTTCCCCTTCTAGTTGAT
CCTTTTCACCTCCCTGATCCCCTTCATTTCTTCACCGCGGTTCCTCGTCATAGGGGTTCTCACTCTGAACTTTCCCTCTCTACTACCCAT
GGCAGGAACCTAGTACAGGTCTCCCACCCAGGGCCTTCCACCCTCGGCTCCTGTGCTGGGAGAAACTTCCAGGCGTGGACAGCCCAGCCT
GAGGCATTCCAGTGCTGGGGCACCGTCGCCTAACCTGGTTTCTAGCTTTGCCCTCACTCCCCGGAAAAACTGACACTGACACAGGGGCCC
TTTCCTTGCCCCTTTAGCTGGTACCTCAGTGGGGAGGCTTCCTTACCAAGAATGAGTTCCTGAAACCCAGGGCCAGAGACAAGGACAACT
TAGGGGAAGACGGGGTTTTCGGTGGAGCCAGGGGCAAATCTTAATGGGACCAGTGGGGGATACCCCAGAGCCCATGGCCTGACTGCACAG
CCTGCCTGGAGGATGGGTGCGCAGCTCTGCCCTCCCTGAGGCCCAGGACTATGCCAGAAGCGATGGGGTACCGTGTAGGGGAGCCAAGGC
CAGTAGTTTGGGGGTAGGAGTCCCCTAGAGTCTCAGAAGACTGGGCTCTTTGGAGTACAGGGTCCCCGGCCTCTCCTTTAAGATTCTCTC
CCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGAGACCCAGCTCTCCTTTCTGTCCCGTTTGCAGCACTGGTTTTGTTTCCTTAAT

>In-frame_ENST00000301335_ENST00000263073_TCGA-A8-A06Z_SLC43A2_chr17_1516488_-_SMG6_chr17_2187029_length(amino acids)=807AA_start in transcript=89_stop in transcript=2512
MAPTLATAHRRRWWMACTAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGTVGGTAEPGHEEVSWMNGWLSCQAQDEMLNL
AFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCLLIAYGASKPNALSVLIFIALALNGFGGMCMTFTSLTRRKLDAVYYYMRS
LAASNPILTAKESLMSLFEETKRKAEQMEKKQHEEFDLSPDQWRKGKKSTFRHVGDDTTRLEIWIHPSHPRSSQGTESGKDSEQENGLGS
LSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEKVLKEFQVLLQHSPSPIGSTRMLQLMTINMFAVHNSQLKDCFSEECRSVIQEQAA
ALGLAMFSLLVRRCTCLLKESAKAQLSSPEDQDDQDDIKVSSFVPDLKELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSHVAVDVWSTLA
DFCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGK
YVSVAPVPDTMGKEMGSQEGTRLEDEEEDVVIEDFEEDSEAEGSGGEDDIRELRAKKLALARKIAEQQRRQEKIQAVLEDHSQMRQMELE
IRPLFLVPDTNGFIDHLASLARLLESRKYILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLEQRFESRDSCLRALTSRG

--------------------------------------------------------------
>In-frame_ENST00000382147_ENST00000544865_TCGA-A8-A06Z_SLC43A2_chr17_1516488_-_SMG6_chr17_2187029_length(transcript)=4166nt_BP=590nt
AGAAAAGGCGCCGGGCGGGCCCGACACACGCCGGAGGAGCCGGGTGGTGCAGAGCCGGAGCCGGAGCCGGAGCCGCGCCGCGCCGCACCA
TGGCGCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTGGATGGCCTGCACGGCCGTGCTGGAGAACCTCCTCTTCTCGGCAGTCCTCC
TGGGCTGGGGCTCGCTGCTCATCATGCTCAAGTCAGAGGGCTTTTACTCCTACCTGTGTACCGAGCCAGAGAATGTCACCAATGGCACAG
TGGGCGGCACAGCAGAGCCGGGGCACGAGGAGGTGAGCTGGATGAACGGCTGGCTCAGCTGCCAGGCCCAGGACGAGATGCTAAATTTGG
CCTTCACTGTGGGCTCCTTTCTGCTCAGTGCCATCACCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAAGCTCAGGCTGC
TGGGCAGCGCCTGCTTCGCGGTTTCCTGCTTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGCTCATCTTCATCGCCC
TGGCTCTGAATGGCTTTGGTGGGATGTGTATGACCTTCACCTCATTAACAAGGAGGAAGCTTGACGCTGTCTATTACTATATGCGCAGTT
TAGCTGCCAGCAACCCTATCCTGACTGCCAAGGAGAGTCTCATGAGCTTGTTTGAAGAGACCAAGCGGAAGGCAGAACAGATGGAAAAGA
AGCAACATGAGGAATTTGACCTGAGCCCTGACCAGTGGCGGAAAGGAAAGAAGTCTACTTTCCGGCATGTTGGAGATGACACCACTCGCC
TGGAGATCTGGATTCATCCATCCCATCCACGGTCTTCCCAGGGCACTGAGTCTGGGAAGGATTCTGAGCAAGAGAATGGGCTGGGCAGCC
TGAGTCCCAGTGATCTGAACAAAAGGTTCATCCTCAGTTTTCTCCATGCCCATGGGAAGCTGTTTACCCGGATTGGGATGGAGACATTCC
CTGCAGTGGCTGAGAAGGTCCTCAAGGAGTTCCAGGTGTTACTGCAGCACAGCCCCTCTCCCATTGGAAGTACCCGCATGCTGCAGCTTA
TGACCATCAATATGTTTGCAGTACACAACTCCCAGCTGAAAGACTGCTTCTCGGAGGAGTGCCGCTCTGTGATCCAGGAACAAGCCGCAG
CTCTGGGCTTGGCCATGTTTTCTCTACTGGTCCGCCGCTGCACCTGCTTACTTAAGGAGTCCGCCAAAGCTCAGCTGTCCTCTCCTGAGG
ACCAGGATGACCAAGACGACATCAAGGTGTCTTCCTTTGTCCCGGACCTGAAGGAGCTGCTCCCCAGTGTCAAAGTCTGGTCAGATTGGA
TGCTCGGCTACCCGGACACCTGGAATCCTCCTCCCACATCCCTGGATCTGCCCTCGCATGTTGCTGTGGATGTATGGTCGACGCTGGCTG
ATTTCTGTAACATACTGACTGCAGTGAATCAGTCTGAGGTGCCACTGTACAAGGACCCGGATGATGACCTCACCCTTCTTATCCTGGAAG
AGGATCGGCTTCTCTCGGGCTTTGTCCCCTTGCTGGCTGCCCCTCAGGACCCCTGCTACGTGGAGAAAACCTCGGATAAGGTTATTGCAG
CTGACTGCAAAAGGGTCACAGTGCTGAAGTATTTTCTGGAAGCCCTTTGTGGACAAGAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAGT
ATGTGTCAGTGGCACCCGTCCCAGACACCATGGGAAAGGAAATGGGAAGCCAAGAGGGAACACGACTGGAAGATGAGGAGGAGGATGTGG
TGATTGAAGACTTTGAGGAAGATTCAGAGGCTGAAGGCAGCGGAGGCGAGGATGACATCAGGGAGCTTCGGGCCAAGAAGCTGGCTCTGG
CCAGGAAGATAGCTGAGCAGCAGCGTCGCCAGGAAAAGATCCAGGCTGTCCTGGAGGACCACAGTCAGATGAGGCAGATGGAGCTCGAAA
TCAGACCTTTGTTCCTCGTACCAGACACCAACGGCTTCATTGACCACCTGGCCAGTCTGGCGCGGCTGCTGGAGAGCAGGAAGTACATCC
TGGTGGTGCCCCTCATCGTGATCAATGAGCTGGACGGCCTGGCCAAGGGGCAGGAGACAGACCACCGGGCTGGGGGCTACGCCCGTGTGG
TACAAGAGAAGGCCCGCAAGTCCATCGAGTTCCTCGAGCAGCGATTCGAGAGTCGGGACTCTTGCCTGCGAGCCCTGACCAGCCGTGGCA
ATGAACTCGAATCCATCGCCTTCCGCAGTGAGGACATCACTGGCCAGCTGGGTAACAACGATGATCTCATCCTGTCCTGCTGCCTCCACT
ACTGCAAAGACAAGGCTAAGGACTTCATGCCCGCCAGCAAAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACGGATGACC
GGAACCTGCGTGTGAAGGCGCTCACAAGGAATGTTCCTGTACGGGACATCCCAGCCTTCCTCACGTGGGCCCAGGTGGGCTGAGGGAGCC
ACACTGGGGCCCCCCCCCCGTGGAACCGTTCCTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCA
ATCCACCCAGACAATAAACCATCCTCTTCCAACCCACGCCACGGCCATGCTGTGGGGGACCTGCTCCTCACAGAGCCCCTCCCAAGGATC
GGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGATTTAGCAGGGAGGTGGCTGGCTACAGCAACAGCAGCTGGGCAAGCCAGATAGG
CCGCCCATGCTCTCAGCCTTTCTCCCTCCCCCGTCTCATTCCAAGGCTGAGGGAGGGCCTTCTCGCCTGGGGACGCAGCCACTTTCTCCA
GTGGAGACAGGGCAGGGGTTCTGAGTTTCCGTCAGATGCAGTGAAATCACAGTTCCCTTTCATCTTCAGAACCTCTGTCGTGAATGTGTT
CAAGAGGCTTTGGTTAAGTCAGGAAGAAGTGCCCAGGGTGTGTGTCCCCAGTCTCCCTGAGGCCTGGACTCGCCCATGAACCCAAGTCGG
CTTCTAGACAGCATGTCCCTAACAGCAGCCCTGGGCCCCCACCTCTTCTACCATCCACCCCAGACTTACCACACACCCTTCCTGCTGCTC
CTCTTCCTGCCCTTATCAACCTGGGTCCCTCACACTTCGCCAGTTGCGTCCCCGTGGACAGTCATGAGTCTAGAGGAAAGGGGCATCTGG
TCTCAGGCCCGTGCTCTCGGGTGGCCTCCACCTGCTCCCTCTCTCCTCACTGGCCTTTCTTTCCGTCTAGCTTCCTCTTCAGGAAATGTC
CTGACTCCCCTCAGCTCCCCCTTCACCCCTCCTTGCCCGCCTACCCTCCCTCCAGAATAGCCCCTCACCCTTCTTCCCCTTCTAGTTGAT
CCTTTTCACCTCCCTGATCCCCTTCATTTCTTCACCGCGGTTCCTCGTCATAGGGGTTCTCACTCTGAACTTTCCCTCTCTACTACCCAT
GGCAGGAACCTAGTACAGGTCTCCCACCCAGGGCCTTCCACCCTCGGCTCCTGTGCTGGGAGAAACTTCCAGGCGTGGACAGCCCAGCCT
GAGGCATTCCAGTGCTGGGGCACCGTCGCCTAACCTGGTTTCTAGCTTTGCCCTCACTCCCCGGAAAAACTGACACTGACACAGGGGCCC
TTTCCTTGCCCCTTTAGCTGGTACCTCAGTGGGGAGGCTTCCTTACCAAGAATGAGTTCCTGAAACCCAGGGCCAGAGACAAGGACAACT
TAGGGGAAGACGGGGTTTTCGGTGGAGCCAGGGGCAAATCTTAATGGGACCAGTGGGGGATACCCCAGAGCCCATGGCCTGACTGCACAG
CCTGCCTGGAGGATGGGTGCGCAGCTCTGCCCTCCCTGAGGCCCAGGACTATGCCAGAAGCGATGGGGTACCGTGTAGGGGAGCCAAGGC
CAGTAGTTTGGGGGTAGGAGTCCCCTAGAGTCTCAGAAGACTGGGCTCTTTGGAGTACAGGGTCCCCGGCCTCTCCTTTAAGATTCTCTC
CCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGAGACCCAGCTCTCCTTTCTGTCCCGTTTGCAGCACTGGTTTTGTTTCCTTAAT

>In-frame_ENST00000382147_ENST00000544865_TCGA-A8-A06Z_SLC43A2_chr17_1516488_-_SMG6_chr17_2187029_length(amino acids)=807AA_start in transcript=89_stop in transcript=2512
MAPTLATAHRRRWWMACTAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGTVGGTAEPGHEEVSWMNGWLSCQAQDEMLNL
AFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCLLIAYGASKPNALSVLIFIALALNGFGGMCMTFTSLTRRKLDAVYYYMRS
LAASNPILTAKESLMSLFEETKRKAEQMEKKQHEEFDLSPDQWRKGKKSTFRHVGDDTTRLEIWIHPSHPRSSQGTESGKDSEQENGLGS
LSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEKVLKEFQVLLQHSPSPIGSTRMLQLMTINMFAVHNSQLKDCFSEECRSVIQEQAA
ALGLAMFSLLVRRCTCLLKESAKAQLSSPEDQDDQDDIKVSSFVPDLKELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSHVAVDVWSTLA
DFCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGK
YVSVAPVPDTMGKEMGSQEGTRLEDEEEDVVIEDFEEDSEAEGSGGEDDIRELRAKKLALARKIAEQQRRQEKIQAVLEDHSQMRQMELE
IRPLFLVPDTNGFIDHLASLARLLESRKYILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLEQRFESRDSCLRALTSRG

--------------------------------------------------------------
>In-frame_ENST00000382147_ENST00000263073_TCGA-A8-A06Z_SLC43A2_chr17_1516488_-_SMG6_chr17_2187029_length(transcript)=4162nt_BP=590nt
AGAAAAGGCGCCGGGCGGGCCCGACACACGCCGGAGGAGCCGGGTGGTGCAGAGCCGGAGCCGGAGCCGGAGCCGCGCCGCGCCGCACCA
TGGCGCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTGGATGGCCTGCACGGCCGTGCTGGAGAACCTCCTCTTCTCGGCAGTCCTCC
TGGGCTGGGGCTCGCTGCTCATCATGCTCAAGTCAGAGGGCTTTTACTCCTACCTGTGTACCGAGCCAGAGAATGTCACCAATGGCACAG
TGGGCGGCACAGCAGAGCCGGGGCACGAGGAGGTGAGCTGGATGAACGGCTGGCTCAGCTGCCAGGCCCAGGACGAGATGCTAAATTTGG
CCTTCACTGTGGGCTCCTTTCTGCTCAGTGCCATCACCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAAGCTCAGGCTGC
TGGGCAGCGCCTGCTTCGCGGTTTCCTGCTTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGCTCATCTTCATCGCCC
TGGCTCTGAATGGCTTTGGTGGGATGTGTATGACCTTCACCTCATTAACAAGGAGGAAGCTTGACGCTGTCTATTACTATATGCGCAGTT
TAGCTGCCAGCAACCCTATCCTGACTGCCAAGGAGAGTCTCATGAGCTTGTTTGAAGAGACCAAGCGGAAGGCAGAACAGATGGAAAAGA
AGCAACATGAGGAATTTGACCTGAGCCCTGACCAGTGGCGGAAAGGAAAGAAGTCTACTTTCCGGCATGTTGGAGATGACACCACTCGCC
TGGAGATCTGGATTCATCCATCCCATCCACGGTCTTCCCAGGGCACTGAGTCTGGGAAGGATTCTGAGCAAGAGAATGGGCTGGGCAGCC
TGAGTCCCAGTGATCTGAACAAAAGGTTCATCCTCAGTTTTCTCCATGCCCATGGGAAGCTGTTTACCCGGATTGGGATGGAGACATTCC
CTGCAGTGGCTGAGAAGGTCCTCAAGGAGTTCCAGGTGTTACTGCAGCACAGCCCCTCTCCCATTGGAAGTACCCGCATGCTGCAGCTTA
TGACCATCAATATGTTTGCAGTACACAACTCCCAGCTGAAAGACTGCTTCTCGGAGGAGTGCCGCTCTGTGATCCAGGAACAAGCCGCAG
CTCTGGGCTTGGCCATGTTTTCTCTACTGGTCCGCCGCTGCACCTGCTTACTTAAGGAGTCCGCCAAAGCTCAGCTGTCCTCTCCTGAGG
ACCAGGATGACCAAGACGACATCAAGGTGTCTTCCTTTGTCCCGGACCTGAAGGAGCTGCTCCCCAGTGTCAAAGTCTGGTCAGATTGGA
TGCTCGGCTACCCGGACACCTGGAATCCTCCTCCCACATCCCTGGATCTGCCCTCGCATGTTGCTGTGGATGTATGGTCGACGCTGGCTG
ATTTCTGTAACATACTGACTGCAGTGAATCAGTCTGAGGTGCCACTGTACAAGGACCCGGATGATGACCTCACCCTTCTTATCCTGGAAG
AGGATCGGCTTCTCTCGGGCTTTGTCCCCTTGCTGGCTGCCCCTCAGGACCCCTGCTACGTGGAGAAAACCTCGGATAAGGTTATTGCAG
CTGACTGCAAAAGGGTCACAGTGCTGAAGTATTTTCTGGAAGCCCTTTGTGGACAAGAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAGT
ATGTGTCAGTGGCACCCGTCCCAGACACCATGGGAAAGGAAATGGGAAGCCAAGAGGGAACACGACTGGAAGATGAGGAGGAGGATGTGG
TGATTGAAGACTTTGAGGAAGATTCAGAGGCTGAAGGCAGCGGAGGCGAGGATGACATCAGGGAGCTTCGGGCCAAGAAGCTGGCTCTGG
CCAGGAAGATAGCTGAGCAGCAGCGTCGCCAGGAAAAGATCCAGGCTGTCCTGGAGGACCACAGTCAGATGAGGCAGATGGAGCTCGAAA
TCAGACCTTTGTTCCTCGTACCAGACACCAACGGCTTCATTGACCACCTGGCCAGTCTGGCGCGGCTGCTGGAGAGCAGGAAGTACATCC
TGGTGGTGCCCCTCATCGTGATCAATGAGCTGGACGGCCTGGCCAAGGGGCAGGAGACAGACCACCGGGCTGGGGGCTACGCCCGTGTGG
TACAAGAGAAGGCCCGCAAGTCCATCGAGTTCCTCGAGCAGCGATTCGAGAGTCGGGACTCTTGCCTGCGAGCCCTGACCAGCCGTGGCA
ATGAACTCGAATCCATCGCCTTCCGCAGTGAGGACATCACTGGCCAGCTGGGTAACAACGATGATCTCATCCTGTCCTGCTGCCTCCACT
ACTGCAAAGACAAGGCTAAGGACTTCATGCCCGCCAGCAAAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACGGATGACC
GGAACCTGCGTGTGAAGGCGCTCACAAGGAATGTTCCTGTACGGGACATCCCAGCCTTCCTCACGTGGGCCCAGGTGGGCTGAGGGAGCC
ACACTGGGGCCCCCCCCCCGTGGAACCGTTCCTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCA
ATCCACCCAGACAATAAACCATCCTCTTCCAACCCACGCCACGGCCATGCTGTGGGGGACCTGCTCCTCACAGAGCCCCTCCCAAGGATC
GGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGATTTAGCAGGGAGGTGGCTGGCTACAGCAACAGCAGCTGGGCAAGCCAGATAGG
CCGCCCATGCTCTCAGCCTTTCTCCCTCCCCCGTCTCATTCCAAGGCTGAGGGAGGGCCTTCTCGCCTGGGGACGCAGCCACTTTCTCCA
GTGGAGACAGGGCAGGGGTTCTGAGTTTCCGTCAGATGCAGTGAAATCACAGTTCCCTTTCATCTTCAGAACCTCTGTCGTGAATGTGTT
CAAGAGGCTTTGGTTAAGTCAGGAAGAAGTGCCCAGGGTGTGTGTCCCCAGTCTCCCTGAGGCCTGGACTCGCCCATGAACCCAAGTCGG
CTTCTAGACAGCATGTCCCTAACAGCAGCCCTGGGCCCCCACCTCTTCTACCATCCACCCCAGACTTACCACACACCCTTCCTGCTGCTC
CTCTTCCTGCCCTTATCAACCTGGGTCCCTCACACTTCGCCAGTTGCGTCCCCGTGGACAGTCATGAGTCTAGAGGAAAGGGGCATCTGG
TCTCAGGCCCGTGCTCTCGGGTGGCCTCCACCTGCTCCCTCTCTCCTCACTGGCCTTTCTTTCCGTCTAGCTTCCTCTTCAGGAAATGTC
CTGACTCCCCTCAGCTCCCCCTTCACCCCTCCTTGCCCGCCTACCCTCCCTCCAGAATAGCCCCTCACCCTTCTTCCCCTTCTAGTTGAT
CCTTTTCACCTCCCTGATCCCCTTCATTTCTTCACCGCGGTTCCTCGTCATAGGGGTTCTCACTCTGAACTTTCCCTCTCTACTACCCAT
GGCAGGAACCTAGTACAGGTCTCCCACCCAGGGCCTTCCACCCTCGGCTCCTGTGCTGGGAGAAACTTCCAGGCGTGGACAGCCCAGCCT
GAGGCATTCCAGTGCTGGGGCACCGTCGCCTAACCTGGTTTCTAGCTTTGCCCTCACTCCCCGGAAAAACTGACACTGACACAGGGGCCC
TTTCCTTGCCCCTTTAGCTGGTACCTCAGTGGGGAGGCTTCCTTACCAAGAATGAGTTCCTGAAACCCAGGGCCAGAGACAAGGACAACT
TAGGGGAAGACGGGGTTTTCGGTGGAGCCAGGGGCAAATCTTAATGGGACCAGTGGGGGATACCCCAGAGCCCATGGCCTGACTGCACAG
CCTGCCTGGAGGATGGGTGCGCAGCTCTGCCCTCCCTGAGGCCCAGGACTATGCCAGAAGCGATGGGGTACCGTGTAGGGGAGCCAAGGC
CAGTAGTTTGGGGGTAGGAGTCCCCTAGAGTCTCAGAAGACTGGGCTCTTTGGAGTACAGGGTCCCCGGCCTCTCCTTTAAGATTCTCTC
CCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGAGACCCAGCTCTCCTTTCTGTCCCGTTTGCAGCACTGGTTTTGTTTCCTTAAT

>In-frame_ENST00000382147_ENST00000263073_TCGA-A8-A06Z_SLC43A2_chr17_1516488_-_SMG6_chr17_2187029_length(amino acids)=807AA_start in transcript=89_stop in transcript=2512
MAPTLATAHRRRWWMACTAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGTVGGTAEPGHEEVSWMNGWLSCQAQDEMLNL
AFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCLLIAYGASKPNALSVLIFIALALNGFGGMCMTFTSLTRRKLDAVYYYMRS
LAASNPILTAKESLMSLFEETKRKAEQMEKKQHEEFDLSPDQWRKGKKSTFRHVGDDTTRLEIWIHPSHPRSSQGTESGKDSEQENGLGS
LSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEKVLKEFQVLLQHSPSPIGSTRMLQLMTINMFAVHNSQLKDCFSEECRSVIQEQAA
ALGLAMFSLLVRRCTCLLKESAKAQLSSPEDQDDQDDIKVSSFVPDLKELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSHVAVDVWSTLA
DFCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGK
YVSVAPVPDTMGKEMGSQEGTRLEDEEEDVVIEDFEEDSEAEGSGGEDDIRELRAKKLALARKIAEQQRRQEKIQAVLEDHSQMRQMELE
IRPLFLVPDTNGFIDHLASLARLLESRKYILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLEQRFESRDSCLRALTSRG

--------------------------------------------------------------

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Fusion Gene PPI Analysis for SLC43A2-SMG6


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with
TgeneSMG6chr17:1516488chr17:2187029ENST00000354901012114_5030512.0telomeric DNA
TgeneSMG6chr17:1516488chr17:2187029ENST00000536871011114_5030512.0telomeric DNA
TgeneSMG6chr17:1516489chr17:2187029ENST00000354901012114_5030512.0telomeric DNA
TgeneSMG6chr17:1516489chr17:2187029ENST00000536871011114_5030512.0telomeric DNA


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with
TgeneSMG6chr17:1516488chr17:2187029ENST00000263073519114_503779.01420.0telomeric DNA
TgeneSMG6chr17:1516488chr17:2187029ENST00000544865519114_503748.01389.0telomeric DNA
TgeneSMG6chr17:1516489chr17:2187029ENST00000263073519114_503779.01420.0telomeric DNA
TgeneSMG6chr17:1516489chr17:2187029ENST00000544865519114_503748.01389.0telomeric DNA


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for SLC43A2-SMG6


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for SLC43A2-SMG6


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneSLC43A2C0023893Liver Cirrhosis, Experimental1CTD_human