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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:ATP8A1-CRMP1 (FusionGDB2 ID:8310)

Fusion Gene Summary for ATP8A1-CRMP1

check button Fusion gene summary
Fusion gene informationFusion gene name: ATP8A1-CRMP1
Fusion gene ID: 8310
HgeneTgene
Gene symbol

ATP8A1

CRMP1

Gene ID

10396

1400

Gene nameATPase phospholipid transporting 8A1collapsin response mediator protein 1
SynonymsATPASEII|ATPIA|ATPP2CRMP-1|DPYSL1|DRP-1|DRP1|ULIP-3
Cytomap

4p13

4p16.2

Type of geneprotein-codingprotein-coding
Descriptionphospholipid-transporting ATPase IAATPase IIATPase class I type 8A member 1ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1P4-ATPase flippase complex alpha subunit ATP8A1aminophospholipid translocasechromaffin granule ATPase dihydropyrimidinase-related protein 1dihydropyrimidinase-like 1inactive dihydropyrimidinaseunc-33-like phosphoprotein 3
Modification date2020032920200320
UniProtAcc

Q9Y2Q0

Q14194

Ensembl transtripts involved in fusion geneENST00000381668, ENST00000264449, 
ENST00000510289, 		ENST00000324989, 
ENST00000397890, ENST00000511535, 
ENST00000512574, 
Fusion gene scores* DoF score9 X 13 X 7=8196 X 7 X 6=252
# samples 138
** MAII scorelog2(13/819*10)=-2.65535182861255
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(8/252*10)=-1.65535182861255
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: ATP8A1 [Title/Abstract] AND CRMP1 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointATP8A1(42626553)-CRMP1(5844888), # samples:3
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneCRMP1

GO:1904530

negative regulation of actin filament binding

25358863


check buttonFusion gene breakpoints across ATP8A1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across CRMP1 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4OVTCGA-25-1324-01AATP8A1chr4

42626553

-CRMP1chr4

5844888

-
ChimerDB4OVTCGA-25-1324ATP8A1chr4

42626552

-CRMP1chr4

5844888

-
ChimerDB4OVTCGA-25-1324-01AATP8A1chr4

42626553

-CRMP1chr4

5844888

-
ChimerDB4OVTCGA-25-1324-01AATP8A1chr4

42626553

-CRMP1chr4

5844888

-


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Fusion Gene ORF analysis for ATP8A1-CRMP1

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000381668ENST00000324989ATP8A1chr4

42626553

-CRMP1chr4

5844888

-
In-frameENST00000381668ENST00000397890ATP8A1chr4

42626553

-CRMP1chr4

5844888

-
5CDS-5UTRENST00000381668ENST00000511535ATP8A1chr4

42626553

-CRMP1chr4

5844888

-
5CDS-5UTRENST00000381668ENST00000512574ATP8A1chr4

42626553

-CRMP1chr4

5844888

-
In-frameENST00000264449ENST00000324989ATP8A1chr4

42626553

-CRMP1chr4

5844888

-
In-frameENST00000264449ENST00000397890ATP8A1chr4

42626553

-CRMP1chr4

5844888

-
5CDS-5UTRENST00000264449ENST00000511535ATP8A1chr4

42626553

-CRMP1chr4

5844888

-
5CDS-5UTRENST00000264449ENST00000512574ATP8A1chr4

42626553

-CRMP1chr4

5844888

-
intron-3CDSENST00000510289ENST00000324989ATP8A1chr4

42626553

-CRMP1chr4

5844888

-
intron-3CDSENST00000510289ENST00000397890ATP8A1chr4

42626553

-CRMP1chr4

5844888

-
intron-5UTRENST00000510289ENST00000511535ATP8A1chr4

42626553

-CRMP1chr4

5844888

-
intron-5UTRENST00000510289ENST00000512574ATP8A1chr4

42626553

-CRMP1chr4

5844888

-
In-frameENST00000381668ENST00000324989ATP8A1chr4

42626552

-CRMP1chr4

5844888

-
In-frameENST00000381668ENST00000397890ATP8A1chr4

42626552

-CRMP1chr4

5844888

-
5CDS-5UTRENST00000381668ENST00000511535ATP8A1chr4

42626552

-CRMP1chr4

5844888

-
5CDS-5UTRENST00000381668ENST00000512574ATP8A1chr4

42626552

-CRMP1chr4

5844888

-
In-frameENST00000264449ENST00000324989ATP8A1chr4

42626552

-CRMP1chr4

5844888

-
In-frameENST00000264449ENST00000397890ATP8A1chr4

42626552

-CRMP1chr4

5844888

-
5CDS-5UTRENST00000264449ENST00000511535ATP8A1chr4

42626552

-CRMP1chr4

5844888

-
5CDS-5UTRENST00000264449ENST00000512574ATP8A1chr4

42626552

-CRMP1chr4

5844888

-
intron-3CDSENST00000510289ENST00000324989ATP8A1chr4

42626552

-CRMP1chr4

5844888

-
intron-3CDSENST00000510289ENST00000397890ATP8A1chr4

42626552

-CRMP1chr4

5844888

-
intron-5UTRENST00000510289ENST00000511535ATP8A1chr4

42626552

-CRMP1chr4

5844888

-
intron-5UTRENST00000510289ENST00000512574ATP8A1chr4

42626552

-CRMP1chr4

5844888

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000381668ATP8A1chr442626553-ENST00000324989CRMP1chr45844888-26895952321692486
ENST00000381668ATP8A1chr442626553-ENST00000397890CRMP1chr45844888-26705952321692486
ENST00000264449ATP8A1chr442626553-ENST00000324989CRMP1chr45844888-26775832201680486
ENST00000264449ATP8A1chr442626553-ENST00000397890CRMP1chr45844888-26585832201680486
ENST00000381668ATP8A1chr442626552-ENST00000324989CRMP1chr45844888-26895952321692486
ENST00000381668ATP8A1chr442626552-ENST00000397890CRMP1chr45844888-26705952321692486
ENST00000264449ATP8A1chr442626552-ENST00000324989CRMP1chr45844888-26775832201680486
ENST00000264449ATP8A1chr442626552-ENST00000397890CRMP1chr45844888-26585832201680486

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000381668ENST00000324989ATP8A1chr442626553-CRMP1chr45844888-0.0022465180.99775344
ENST00000381668ENST00000397890ATP8A1chr442626553-CRMP1chr45844888-0.0023274040.9976726
ENST00000264449ENST00000324989ATP8A1chr442626553-CRMP1chr45844888-0.0020508940.99794906
ENST00000264449ENST00000397890ATP8A1chr442626553-CRMP1chr45844888-0.0021304940.9978695
ENST00000381668ENST00000324989ATP8A1chr442626552-CRMP1chr45844888-0.0022465180.99775344
ENST00000381668ENST00000397890ATP8A1chr442626552-CRMP1chr45844888-0.0023274040.9976726
ENST00000264449ENST00000324989ATP8A1chr442626552-CRMP1chr45844888-0.0020508940.99794906
ENST00000264449ENST00000397890ATP8A1chr442626552-CRMP1chr45844888-0.0021304940.9978695

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Fusion Genomic Features for ATP8A1-CRMP1


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for ATP8A1-CRMP1


check button Go to

FGviewer for the breakpoints of chr4:42626553-chr4:5844888

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
ATP8A1

Q9Y2Q0

CRMP1

Q14194

FUNCTION: Catalytic component of a P4-ATPase flippase complex which catalyzes the hydrolysis of ATP coupled to the transport of aminophospholipids from the outer to the inner leaflet of various membranes and ensures the maintenance of asymmetric distribution of phospholipids (PubMed:31416931). Phospholipid translocation seems also to be implicated in vesicle formation and in uptake of lipid signaling molecules. In vitro, its ATPase activity is selectively and stereospecifically stimulated by phosphatidylserine (PS) (PubMed:31416931). The flippase complex ATP8A1:TMEM30A seems to play a role in regulation of cell migration probably involving flippase-mediated translocation of phosphatidylethanolamine (PE) at the plasma membrane (By similarity). Acts as aminophospholipid translocase at the plasma membrane in neuronal cells (By similarity). {ECO:0000250|UniProtKB:P70704, ECO:0000269|PubMed:31416931}.FUNCTION: Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton (PubMed:25358863). Plays a role in axon guidance (PubMed:25358863). During the axon guidance process, acts downstream of SEMA3A to promote FLNA dissociation from F-actin which results in the rearrangement of the actin cytoskeleton and the collapse of the growth cone (PubMed:25358863). Involved in invasive growth and cell migration (PubMed:11562390). May participate in cytokinesis (PubMed:19799413). {ECO:0000269|PubMed:11562390, ECO:0000269|PubMed:19799413, ECO:0000269|PubMed:25358863}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-4361_65121.01150.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-43687_92121.01150.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-4371_65121.01165.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-43787_92121.01165.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-4361_65121.01150.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-43687_92121.01150.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-4371_65121.01165.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-43787_92121.01165.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-43666_86121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-43693_115121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-43766_86121.01165.0TransmembraneHelical
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-43793_115121.01165.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-43666_86121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-43693_115121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-43766_86121.01165.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-43793_115121.01165.0TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-4361095_1102121.01150.0Nucleotide bindingATP
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-436409_411121.01150.0Nucleotide bindingATP
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-436741_748121.01150.0Nucleotide bindingATP
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-436804_805121.01150.0Nucleotide bindingATP
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-4371095_1102121.01165.0Nucleotide bindingATP
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-437409_411121.01165.0Nucleotide bindingATP
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-437741_748121.01165.0Nucleotide bindingATP
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-437804_805121.01165.0Nucleotide bindingATP
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-4361095_1102121.01150.0Nucleotide bindingATP
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-436409_411121.01150.0Nucleotide bindingATP
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-436741_748121.01150.0Nucleotide bindingATP
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-436804_805121.01150.0Nucleotide bindingATP
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-4371095_1102121.01165.0Nucleotide bindingATP
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-437409_411121.01165.0Nucleotide bindingATP
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-437741_748121.01165.0Nucleotide bindingATP
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-437804_805121.01165.0Nucleotide bindingATP
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-4361000_1005121.01150.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-4361027_1044121.01150.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-4361071_1164121.01150.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-436116_297121.01150.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-436320_344121.01150.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-436367_857121.01150.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-436879_890121.01150.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-436911_940121.01150.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-436963_976121.01150.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-4371000_1005121.01165.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-4371027_1044121.01165.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-4371071_1164121.01165.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-437116_297121.01165.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-437320_344121.01165.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-437367_857121.01165.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-437879_890121.01165.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-437911_940121.01165.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-437963_976121.01165.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-4361000_1005121.01150.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-4361027_1044121.01150.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-4361071_1164121.01150.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-436116_297121.01150.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-436320_344121.01150.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-436367_857121.01150.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-436879_890121.01150.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-436911_940121.01150.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-436963_976121.01150.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-4371000_1005121.01165.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-4371027_1044121.01165.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-4371071_1164121.01165.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-437116_297121.01165.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-437320_344121.01165.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-437367_857121.01165.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-437879_890121.01165.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-437911_940121.01165.0Topological domainCytoplasmic
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-437963_976121.01165.0Topological domainExoplasmic loop
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-4361006_1026121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-4361045_1070121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-436298_319121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-436345_366121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-436858_878121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-436891_910121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626552chr4:5844888ENST00000264449-436941_962121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-4371006_1026121.01165.0TransmembraneHelical
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-4371045_1070121.01165.0TransmembraneHelical
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-437298_319121.01165.0TransmembraneHelical
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-437345_366121.01165.0TransmembraneHelical
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-437858_878121.01165.0TransmembraneHelical
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-437891_910121.01165.0TransmembraneHelical
HgeneATP8A1chr4:42626552chr4:5844888ENST00000381668-437941_962121.01165.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-4361006_1026121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-4361045_1070121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-436298_319121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-436345_366121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-436858_878121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-436891_910121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000264449-436941_962121.01150.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-4371006_1026121.01165.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-4371045_1070121.01165.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-437298_319121.01165.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-437345_366121.01165.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-437858_878121.01165.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-437891_910121.01165.0TransmembraneHelical
HgeneATP8A1chr4:42626553chr4:5844888ENST00000381668-437941_962121.01165.0TransmembraneHelical


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Fusion Gene Sequence for ATP8A1-CRMP1


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000381668_ENST00000324989_TCGA-25-1324-01A_ATP8A1_chr4_42626553_-_CRMP1_chr4_5844888_length(transcript)=2689nt_BP=595nt
AAGAGCTCGCCCAGCTCTGCGGGCGCCGCCACCTTCGCCGCCACCGCTGCCTTTCTCCTCCTCCTGTCGGCGTGCGGGGGCCGCGCCCGG
CGGCAGCTCTGCCCTAGGTGGGCGGCGGCGCGGCCCAGGCTGCAGCTGAGCGCTCTGCGCGGCGCAGCCGGGTCTCCCGCGTGTACCACG
CCGTGACAGGTGCAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTC
GCGCGCCGAAGGTTATGAGAAGACAGATGATGTTTCAGAGAAGACCTCACTGGCTGACCAGGAGGAAGTAAGGACTATTTTCATCAACCA
GCCCCAGCTGACAAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAACATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTT
CAGAAGAGCTGCTAATTCATTTTTTCTCTTTATTGCACTGCTGCAGCAAATACCTGATGTGTCACCAACAGGTCGTTATACAACACTGGT
TCCTCTCTTATTTATTTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGATATTGAACAAAAGCGGATCCTGGAGATGGGCATCACGGG
TCCCGAGGGCCATGCCCTGAGCAGACCTGAAGAGCTGGAGGCCGAGGCGGTGTTCCGGGCCATCACCATTGCGGGCCGGATCAACTGCCC
TGTGTACATCACCAAGGTCATGAGCAAGAGTGCAGCCGACATCATCGCTCTGGCCAGGAAGAAAGGGCCCCTAGTTTTTGGAGAGCCCAT
TGCCGCCAGCCTGGGGACCGATGGCACCCATTACTGGAGCAAGAACTGGGCCAAGGCTGCGGCGTTCGTGACTTCCCCTCCCCTGAGCCC
GGACCCTACCACGCCCGACTACTTGACCTCCCTACTGGCCTGTGGGGACTTGCAGGTCACAGGCAGCGGCCACTGTCCCTACAGCACTGC
CCAGAAGGCGGTGGGCAAGGACAACTTTACCCTGATCCCCGAGGGTGTCAACGGGATAGAGGAGCGGATGACGGTCGTCTGGGACAAGGC
GGTGGCTACTGGCAAAATGGATGAGAACCAGTTTGTCGCTGTCACCAGCACCAATGCAGCCAAGATCTTTAACCTGTACCCAAGGAAAGG
GCGGATTGCCGTGGGCTCGGATGCCGACGTGGTCATCTGGGACCCCGACAAGTTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGT
GGAGTACAACATCTTCGAGGGTATGGAGTGCCACGGCTCCCCACTAGTGGTCATCAGCCAGGGCAAGATCGTCTTTGAAGACGGAAACAT
CAACGTCAACAAGGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTT
TGGATTGCAAGGGGTTTCCAGGGGCATGTATGACGGTCCTGTGTACGAGGTACCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGC
CAAATCTTCGCCTTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCCAGATAGATGACAA
CAATCCCAGGCGCACCGGCCACCGCATCGTGGCGCCCCCTGGTGGCCGCTCCAACATCACCAGCCTCGGTTGAACGTGGATGCGCGGAGG
AGCTAGCCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTGCTGATGGAGGG
AGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAATTCCTTGCCCCAC
AGTTGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGTGAACCACAGGTTTTAGCATTGTCTTGTTCTGT
CCCTTCCACTTCTAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGTTGATGCATGT
TACTAAATTACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
GGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACC
TGTGAGATCCGTGAATTCTCGGAATGGCAGGGGAAGCCTTGCACTAGGTTGCAGAGAAGCATCCTCCACATCCTGTGTCAGAAACCCTGG
TCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCTTCAGGCCGAGCCAGGTTCAC
ACTCAGAAAGAGGTCTCCCCATCCCCATTCGGGGCTGACGATGGGGGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGA
GGCAGTTGACGGGGCAGTCAGATTTTTAAAGTTTTGTACAAAGTTTTCCTTTGTAATCACTCCCATTTTTACTTAACAACCAACTTGTTG

>In-frame_ENST00000381668_ENST00000324989_TCGA-25-1324-01A_ATP8A1_chr4_42626553_-_CRMP1_chr4_5844888_length(amino acids)=486AA_start in transcript=232_stop in transcript=1692
MPTMRRTVSEIRSRAEGYEKTDDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQI
PDVSPTGRYTTLVPLLFILAVAAIKEIIEDIEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIIAL
ARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVN
GIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVV
ISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQ

--------------------------------------------------------------
>In-frame_ENST00000381668_ENST00000397890_TCGA-25-1324-01A_ATP8A1_chr4_42626553_-_CRMP1_chr4_5844888_length(transcript)=2670nt_BP=595nt
AAGAGCTCGCCCAGCTCTGCGGGCGCCGCCACCTTCGCCGCCACCGCTGCCTTTCTCCTCCTCCTGTCGGCGTGCGGGGGCCGCGCCCGG
CGGCAGCTCTGCCCTAGGTGGGCGGCGGCGCGGCCCAGGCTGCAGCTGAGCGCTCTGCGCGGCGCAGCCGGGTCTCCCGCGTGTACCACG
CCGTGACAGGTGCAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTC
GCGCGCCGAAGGTTATGAGAAGACAGATGATGTTTCAGAGAAGACCTCACTGGCTGACCAGGAGGAAGTAAGGACTATTTTCATCAACCA
GCCCCAGCTGACAAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAACATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTT
CAGAAGAGCTGCTAATTCATTTTTTCTCTTTATTGCACTGCTGCAGCAAATACCTGATGTGTCACCAACAGGTCGTTATACAACACTGGT
TCCTCTCTTATTTATTTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGATATTGAACAAAAGCGGATCCTGGAGATGGGCATCACGGG
TCCCGAGGGCCATGCCCTGAGCAGACCTGAAGAGCTGGAGGCCGAGGCGGTGTTCCGGGCCATCACCATTGCGGGCCGGATCAACTGCCC
TGTGTACATCACCAAGGTCATGAGCAAGAGTGCAGCCGACATCATCGCTCTGGCCAGGAAGAAAGGGCCCCTAGTTTTTGGAGAGCCCAT
TGCCGCCAGCCTGGGGACCGATGGCACCCATTACTGGAGCAAGAACTGGGCCAAGGCTGCGGCGTTCGTGACTTCCCCTCCCCTGAGCCC
GGACCCTACCACGCCCGACTACTTGACCTCCCTACTGGCCTGTGGGGACTTGCAGGTCACAGGCAGCGGCCACTGTCCCTACAGCACTGC
CCAGAAGGCGGTGGGCAAGGACAACTTTACCCTGATCCCCGAGGGTGTCAACGGGATAGAGGAGCGGATGACGGTCGTCTGGGACAAGGC
GGTGGCTACTGGCAAAATGGATGAGAACCAGTTTGTCGCTGTCACCAGCACCAATGCAGCCAAGATCTTTAACCTGTACCCAAGGAAAGG
GCGGATTGCCGTGGGCTCGGATGCCGACGTGGTCATCTGGGACCCCGACAAGTTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGT
GGAGTACAACATCTTCGAGGGTATGGAGTGCCACGGCTCCCCACTAGTGGTCATCAGCCAGGGCAAGATCGTCTTTGAAGACGGAAACAT
CAACGTCAACAAGGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTT
TGGATTGCAAGGGGTTTCCAGGGGCATGTATGACGGTCCTGTGTACGAGGTACCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGC
CAAATCTTCGCCTTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCCAGATAGATGACAA
CAATCCCAGGCGCACCGGCCACCGCATCGTGGCGCCCCCTGGTGGCCGCTCCAACATCACCAGCCTCGGTTGAACGTGGATGCGCGGAGG
AGCTAGCCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTGCTGATGGAGGG
AGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAATTCCTTGCCCCAC
AGTTGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGTGAACCACAGGTTTTAGCATTGTCTTGTTCTGT
CCCTTCCACTTCTAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGTTGATGCATGT
TACTAAATTACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
GGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACC
TGTGAGATCCGTGAATTCTCGGAATGGCAGGGGAAGCCTTGCACTAGGTTGCAGAGAAGCATCCTCCACATCCTGTGTCAGAAACCCTGG
TCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCTTCAGGCCGAGCCAGGTTCAC
ACTCAGAAAGAGGTCTCCCCATCCCCATTCGGGGCTGACGATGGGGGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGA
GGCAGTTGACGGGGCAGTCAGATTTTTAAAGTTTTGTACAAAGTTTTCCTTTGTAATCACTCCCATTTTTACTTAACAACCAACTTGTTG

>In-frame_ENST00000381668_ENST00000397890_TCGA-25-1324-01A_ATP8A1_chr4_42626553_-_CRMP1_chr4_5844888_length(amino acids)=486AA_start in transcript=232_stop in transcript=1692
MPTMRRTVSEIRSRAEGYEKTDDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQI
PDVSPTGRYTTLVPLLFILAVAAIKEIIEDIEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIIAL
ARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVN
GIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVV
ISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQ

--------------------------------------------------------------
>In-frame_ENST00000264449_ENST00000324989_TCGA-25-1324-01A_ATP8A1_chr4_42626553_-_CRMP1_chr4_5844888_length(transcript)=2677nt_BP=583nt
AGCTCTGCGGGCGCCGCCACCTTCGCCGCCACCGCTGCCTTTCTCCTCCTCCTGTCGGCGTGCGGGGGCCGCGCCCGGCGGCAGCTCTGC
CCTAGGTGGGCGGCGGCGCGGCCCAGGCTGCAGCTGAGCGCTCTGCGCGGCGCAGCCGGGTCTCCCGCGTGTACCACGCCGTGACAGGTG
CAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTCGCGCGCCGAAGG
TTATGAGAAGACAGATGATGTTTCAGAGAAGACCTCACTGGCTGACCAGGAGGAAGTAAGGACTATTTTCATCAACCAGCCCCAGCTGAC
AAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAACATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTTCAGAAGAGCTGC
TAATTCATTTTTTCTCTTTATTGCACTGCTGCAGCAAATACCTGATGTGTCACCAACAGGTCGTTATACAACACTGGTTCCTCTCTTATT
TATTTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGATATTGAACAAAAGCGGATCCTGGAGATGGGCATCACGGGTCCCGAGGGCCA
TGCCCTGAGCAGACCTGAAGAGCTGGAGGCCGAGGCGGTGTTCCGGGCCATCACCATTGCGGGCCGGATCAACTGCCCTGTGTACATCAC
CAAGGTCATGAGCAAGAGTGCAGCCGACATCATCGCTCTGGCCAGGAAGAAAGGGCCCCTAGTTTTTGGAGAGCCCATTGCCGCCAGCCT
GGGGACCGATGGCACCCATTACTGGAGCAAGAACTGGGCCAAGGCTGCGGCGTTCGTGACTTCCCCTCCCCTGAGCCCGGACCCTACCAC
GCCCGACTACTTGACCTCCCTACTGGCCTGTGGGGACTTGCAGGTCACAGGCAGCGGCCACTGTCCCTACAGCACTGCCCAGAAGGCGGT
GGGCAAGGACAACTTTACCCTGATCCCCGAGGGTGTCAACGGGATAGAGGAGCGGATGACGGTCGTCTGGGACAAGGCGGTGGCTACTGG
CAAAATGGATGAGAACCAGTTTGTCGCTGTCACCAGCACCAATGCAGCCAAGATCTTTAACCTGTACCCAAGGAAAGGGCGGATTGCCGT
GGGCTCGGATGCCGACGTGGTCATCTGGGACCCCGACAAGTTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGTGGAGTACAACAT
CTTCGAGGGTATGGAGTGCCACGGCTCCCCACTAGTGGTCATCAGCCAGGGCAAGATCGTCTTTGAAGACGGAAACATCAACGTCAACAA
GGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTTTGGATTGCAAGG
GGTTTCCAGGGGCATGTATGACGGTCCTGTGTACGAGGTACCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCC
TTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCCAGATAGATGACAACAATCCCAGGCG
CACCGGCCACCGCATCGTGGCGCCCCCTGGTGGCCGCTCCAACATCACCAGCCTCGGTTGAACGTGGATGCGCGGAGGAGCTAGCCTGAA
GGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTGCTGATGGAGGGAGGGGGAAGTCG
AAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAATTCCTTGCCCCACAGTTGTGTTCAT
GCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGTGAACCACAGGTTTTAGCATTGTCTTGTTCTGTCCCTTCCACTTC
TAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGTTGATGCATGTTACTAAATTACG
TATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCA
AAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGATCCGT
GAATTCTCGGAATGGCAGGGGAAGCCTTGCACTAGGTTGCAGAGAAGCATCCTCCACATCCTGTGTCAGAAACCCTGGTCTCCGTGGCAC
TTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCTTCAGGCCGAGCCAGGTTCACACTCAGAAAGAG
GTCTCCCCATCCCCATTCGGGGCTGACGATGGGGGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGACGG
GGCAGTCAGATTTTTAAAGTTTTGTACAAAGTTTTCCTTTGTAATCACTCCCATTTTTACTTAACAACCAACTTGTTGTGGCTCTTATTT

>In-frame_ENST00000264449_ENST00000324989_TCGA-25-1324-01A_ATP8A1_chr4_42626553_-_CRMP1_chr4_5844888_length(amino acids)=486AA_start in transcript=220_stop in transcript=1680
MPTMRRTVSEIRSRAEGYEKTDDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQI
PDVSPTGRYTTLVPLLFILAVAAIKEIIEDIEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIIAL
ARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVN
GIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVV
ISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQ

--------------------------------------------------------------
>In-frame_ENST00000264449_ENST00000397890_TCGA-25-1324-01A_ATP8A1_chr4_42626553_-_CRMP1_chr4_5844888_length(transcript)=2658nt_BP=583nt
AGCTCTGCGGGCGCCGCCACCTTCGCCGCCACCGCTGCCTTTCTCCTCCTCCTGTCGGCGTGCGGGGGCCGCGCCCGGCGGCAGCTCTGC
CCTAGGTGGGCGGCGGCGCGGCCCAGGCTGCAGCTGAGCGCTCTGCGCGGCGCAGCCGGGTCTCCCGCGTGTACCACGCCGTGACAGGTG
CAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTCGCGCGCCGAAGG
TTATGAGAAGACAGATGATGTTTCAGAGAAGACCTCACTGGCTGACCAGGAGGAAGTAAGGACTATTTTCATCAACCAGCCCCAGCTGAC
AAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAACATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTTCAGAAGAGCTGC
TAATTCATTTTTTCTCTTTATTGCACTGCTGCAGCAAATACCTGATGTGTCACCAACAGGTCGTTATACAACACTGGTTCCTCTCTTATT
TATTTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGATATTGAACAAAAGCGGATCCTGGAGATGGGCATCACGGGTCCCGAGGGCCA
TGCCCTGAGCAGACCTGAAGAGCTGGAGGCCGAGGCGGTGTTCCGGGCCATCACCATTGCGGGCCGGATCAACTGCCCTGTGTACATCAC
CAAGGTCATGAGCAAGAGTGCAGCCGACATCATCGCTCTGGCCAGGAAGAAAGGGCCCCTAGTTTTTGGAGAGCCCATTGCCGCCAGCCT
GGGGACCGATGGCACCCATTACTGGAGCAAGAACTGGGCCAAGGCTGCGGCGTTCGTGACTTCCCCTCCCCTGAGCCCGGACCCTACCAC
GCCCGACTACTTGACCTCCCTACTGGCCTGTGGGGACTTGCAGGTCACAGGCAGCGGCCACTGTCCCTACAGCACTGCCCAGAAGGCGGT
GGGCAAGGACAACTTTACCCTGATCCCCGAGGGTGTCAACGGGATAGAGGAGCGGATGACGGTCGTCTGGGACAAGGCGGTGGCTACTGG
CAAAATGGATGAGAACCAGTTTGTCGCTGTCACCAGCACCAATGCAGCCAAGATCTTTAACCTGTACCCAAGGAAAGGGCGGATTGCCGT
GGGCTCGGATGCCGACGTGGTCATCTGGGACCCCGACAAGTTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGTGGAGTACAACAT
CTTCGAGGGTATGGAGTGCCACGGCTCCCCACTAGTGGTCATCAGCCAGGGCAAGATCGTCTTTGAAGACGGAAACATCAACGTCAACAA
GGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTTTGGATTGCAAGG
GGTTTCCAGGGGCATGTATGACGGTCCTGTGTACGAGGTACCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCC
TTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCCAGATAGATGACAACAATCCCAGGCG
CACCGGCCACCGCATCGTGGCGCCCCCTGGTGGCCGCTCCAACATCACCAGCCTCGGTTGAACGTGGATGCGCGGAGGAGCTAGCCTGAA
GGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTGCTGATGGAGGGAGGGGGAAGTCG
AAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAATTCCTTGCCCCACAGTTGTGTTCAT
GCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGTGAACCACAGGTTTTAGCATTGTCTTGTTCTGTCCCTTCCACTTC
TAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGTTGATGCATGTTACTAAATTACG
TATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCA
AAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGATCCGT
GAATTCTCGGAATGGCAGGGGAAGCCTTGCACTAGGTTGCAGAGAAGCATCCTCCACATCCTGTGTCAGAAACCCTGGTCTCCGTGGCAC
TTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCTTCAGGCCGAGCCAGGTTCACACTCAGAAAGAG
GTCTCCCCATCCCCATTCGGGGCTGACGATGGGGGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGACGG
GGCAGTCAGATTTTTAAAGTTTTGTACAAAGTTTTCCTTTGTAATCACTCCCATTTTTACTTAACAACCAACTTGTTGTGGCTCTTATTT

>In-frame_ENST00000264449_ENST00000397890_TCGA-25-1324-01A_ATP8A1_chr4_42626553_-_CRMP1_chr4_5844888_length(amino acids)=486AA_start in transcript=220_stop in transcript=1680
MPTMRRTVSEIRSRAEGYEKTDDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQI
PDVSPTGRYTTLVPLLFILAVAAIKEIIEDIEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIIAL
ARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVN
GIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVV
ISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQ

--------------------------------------------------------------
>In-frame_ENST00000381668_ENST00000324989_TCGA-25-1324_ATP8A1_chr4_42626552_-_CRMP1_chr4_5844888_length(transcript)=2689nt_BP=595nt
AAGAGCTCGCCCAGCTCTGCGGGCGCCGCCACCTTCGCCGCCACCGCTGCCTTTCTCCTCCTCCTGTCGGCGTGCGGGGGCCGCGCCCGG
CGGCAGCTCTGCCCTAGGTGGGCGGCGGCGCGGCCCAGGCTGCAGCTGAGCGCTCTGCGCGGCGCAGCCGGGTCTCCCGCGTGTACCACG
CCGTGACAGGTGCAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTC
GCGCGCCGAAGGTTATGAGAAGACAGATGATGTTTCAGAGAAGACCTCACTGGCTGACCAGGAGGAAGTAAGGACTATTTTCATCAACCA
GCCCCAGCTGACAAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAACATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTT
CAGAAGAGCTGCTAATTCATTTTTTCTCTTTATTGCACTGCTGCAGCAAATACCTGATGTGTCACCAACAGGTCGTTATACAACACTGGT
TCCTCTCTTATTTATTTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGATATTGAACAAAAGCGGATCCTGGAGATGGGCATCACGGG
TCCCGAGGGCCATGCCCTGAGCAGACCTGAAGAGCTGGAGGCCGAGGCGGTGTTCCGGGCCATCACCATTGCGGGCCGGATCAACTGCCC
TGTGTACATCACCAAGGTCATGAGCAAGAGTGCAGCCGACATCATCGCTCTGGCCAGGAAGAAAGGGCCCCTAGTTTTTGGAGAGCCCAT
TGCCGCCAGCCTGGGGACCGATGGCACCCATTACTGGAGCAAGAACTGGGCCAAGGCTGCGGCGTTCGTGACTTCCCCTCCCCTGAGCCC
GGACCCTACCACGCCCGACTACTTGACCTCCCTACTGGCCTGTGGGGACTTGCAGGTCACAGGCAGCGGCCACTGTCCCTACAGCACTGC
CCAGAAGGCGGTGGGCAAGGACAACTTTACCCTGATCCCCGAGGGTGTCAACGGGATAGAGGAGCGGATGACGGTCGTCTGGGACAAGGC
GGTGGCTACTGGCAAAATGGATGAGAACCAGTTTGTCGCTGTCACCAGCACCAATGCAGCCAAGATCTTTAACCTGTACCCAAGGAAAGG
GCGGATTGCCGTGGGCTCGGATGCCGACGTGGTCATCTGGGACCCCGACAAGTTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGT
GGAGTACAACATCTTCGAGGGTATGGAGTGCCACGGCTCCCCACTAGTGGTCATCAGCCAGGGCAAGATCGTCTTTGAAGACGGAAACAT
CAACGTCAACAAGGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTT
TGGATTGCAAGGGGTTTCCAGGGGCATGTATGACGGTCCTGTGTACGAGGTACCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGC
CAAATCTTCGCCTTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCCAGATAGATGACAA
CAATCCCAGGCGCACCGGCCACCGCATCGTGGCGCCCCCTGGTGGCCGCTCCAACATCACCAGCCTCGGTTGAACGTGGATGCGCGGAGG
AGCTAGCCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTGCTGATGGAGGG
AGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAATTCCTTGCCCCAC
AGTTGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGTGAACCACAGGTTTTAGCATTGTCTTGTTCTGT
CCCTTCCACTTCTAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGTTGATGCATGT
TACTAAATTACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
GGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACC
TGTGAGATCCGTGAATTCTCGGAATGGCAGGGGAAGCCTTGCACTAGGTTGCAGAGAAGCATCCTCCACATCCTGTGTCAGAAACCCTGG
TCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCTTCAGGCCGAGCCAGGTTCAC
ACTCAGAAAGAGGTCTCCCCATCCCCATTCGGGGCTGACGATGGGGGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGA
GGCAGTTGACGGGGCAGTCAGATTTTTAAAGTTTTGTACAAAGTTTTCCTTTGTAATCACTCCCATTTTTACTTAACAACCAACTTGTTG

>In-frame_ENST00000381668_ENST00000324989_TCGA-25-1324_ATP8A1_chr4_42626552_-_CRMP1_chr4_5844888_length(amino acids)=486AA_start in transcript=232_stop in transcript=1692
MPTMRRTVSEIRSRAEGYEKTDDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQI
PDVSPTGRYTTLVPLLFILAVAAIKEIIEDIEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIIAL
ARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVN
GIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVV
ISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQ

--------------------------------------------------------------
>In-frame_ENST00000381668_ENST00000397890_TCGA-25-1324_ATP8A1_chr4_42626552_-_CRMP1_chr4_5844888_length(transcript)=2670nt_BP=595nt
AAGAGCTCGCCCAGCTCTGCGGGCGCCGCCACCTTCGCCGCCACCGCTGCCTTTCTCCTCCTCCTGTCGGCGTGCGGGGGCCGCGCCCGG
CGGCAGCTCTGCCCTAGGTGGGCGGCGGCGCGGCCCAGGCTGCAGCTGAGCGCTCTGCGCGGCGCAGCCGGGTCTCCCGCGTGTACCACG
CCGTGACAGGTGCAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTC
GCGCGCCGAAGGTTATGAGAAGACAGATGATGTTTCAGAGAAGACCTCACTGGCTGACCAGGAGGAAGTAAGGACTATTTTCATCAACCA
GCCCCAGCTGACAAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAACATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTT
CAGAAGAGCTGCTAATTCATTTTTTCTCTTTATTGCACTGCTGCAGCAAATACCTGATGTGTCACCAACAGGTCGTTATACAACACTGGT
TCCTCTCTTATTTATTTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGATATTGAACAAAAGCGGATCCTGGAGATGGGCATCACGGG
TCCCGAGGGCCATGCCCTGAGCAGACCTGAAGAGCTGGAGGCCGAGGCGGTGTTCCGGGCCATCACCATTGCGGGCCGGATCAACTGCCC
TGTGTACATCACCAAGGTCATGAGCAAGAGTGCAGCCGACATCATCGCTCTGGCCAGGAAGAAAGGGCCCCTAGTTTTTGGAGAGCCCAT
TGCCGCCAGCCTGGGGACCGATGGCACCCATTACTGGAGCAAGAACTGGGCCAAGGCTGCGGCGTTCGTGACTTCCCCTCCCCTGAGCCC
GGACCCTACCACGCCCGACTACTTGACCTCCCTACTGGCCTGTGGGGACTTGCAGGTCACAGGCAGCGGCCACTGTCCCTACAGCACTGC
CCAGAAGGCGGTGGGCAAGGACAACTTTACCCTGATCCCCGAGGGTGTCAACGGGATAGAGGAGCGGATGACGGTCGTCTGGGACAAGGC
GGTGGCTACTGGCAAAATGGATGAGAACCAGTTTGTCGCTGTCACCAGCACCAATGCAGCCAAGATCTTTAACCTGTACCCAAGGAAAGG
GCGGATTGCCGTGGGCTCGGATGCCGACGTGGTCATCTGGGACCCCGACAAGTTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGT
GGAGTACAACATCTTCGAGGGTATGGAGTGCCACGGCTCCCCACTAGTGGTCATCAGCCAGGGCAAGATCGTCTTTGAAGACGGAAACAT
CAACGTCAACAAGGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTT
TGGATTGCAAGGGGTTTCCAGGGGCATGTATGACGGTCCTGTGTACGAGGTACCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGC
CAAATCTTCGCCTTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCCAGATAGATGACAA
CAATCCCAGGCGCACCGGCCACCGCATCGTGGCGCCCCCTGGTGGCCGCTCCAACATCACCAGCCTCGGTTGAACGTGGATGCGCGGAGG
AGCTAGCCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTGCTGATGGAGGG
AGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAATTCCTTGCCCCAC
AGTTGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGTGAACCACAGGTTTTAGCATTGTCTTGTTCTGT
CCCTTCCACTTCTAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGTTGATGCATGT
TACTAAATTACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA
GGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACC
TGTGAGATCCGTGAATTCTCGGAATGGCAGGGGAAGCCTTGCACTAGGTTGCAGAGAAGCATCCTCCACATCCTGTGTCAGAAACCCTGG
TCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCTTCAGGCCGAGCCAGGTTCAC
ACTCAGAAAGAGGTCTCCCCATCCCCATTCGGGGCTGACGATGGGGGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGA
GGCAGTTGACGGGGCAGTCAGATTTTTAAAGTTTTGTACAAAGTTTTCCTTTGTAATCACTCCCATTTTTACTTAACAACCAACTTGTTG

>In-frame_ENST00000381668_ENST00000397890_TCGA-25-1324_ATP8A1_chr4_42626552_-_CRMP1_chr4_5844888_length(amino acids)=486AA_start in transcript=232_stop in transcript=1692
MPTMRRTVSEIRSRAEGYEKTDDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQI
PDVSPTGRYTTLVPLLFILAVAAIKEIIEDIEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIIAL
ARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVN
GIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVV
ISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQ

--------------------------------------------------------------
>In-frame_ENST00000264449_ENST00000324989_TCGA-25-1324_ATP8A1_chr4_42626552_-_CRMP1_chr4_5844888_length(transcript)=2677nt_BP=583nt
AGCTCTGCGGGCGCCGCCACCTTCGCCGCCACCGCTGCCTTTCTCCTCCTCCTGTCGGCGTGCGGGGGCCGCGCCCGGCGGCAGCTCTGC
CCTAGGTGGGCGGCGGCGCGGCCCAGGCTGCAGCTGAGCGCTCTGCGCGGCGCAGCCGGGTCTCCCGCGTGTACCACGCCGTGACAGGTG
CAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTCGCGCGCCGAAGG
TTATGAGAAGACAGATGATGTTTCAGAGAAGACCTCACTGGCTGACCAGGAGGAAGTAAGGACTATTTTCATCAACCAGCCCCAGCTGAC
AAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAACATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTTCAGAAGAGCTGC
TAATTCATTTTTTCTCTTTATTGCACTGCTGCAGCAAATACCTGATGTGTCACCAACAGGTCGTTATACAACACTGGTTCCTCTCTTATT
TATTTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGATATTGAACAAAAGCGGATCCTGGAGATGGGCATCACGGGTCCCGAGGGCCA
TGCCCTGAGCAGACCTGAAGAGCTGGAGGCCGAGGCGGTGTTCCGGGCCATCACCATTGCGGGCCGGATCAACTGCCCTGTGTACATCAC
CAAGGTCATGAGCAAGAGTGCAGCCGACATCATCGCTCTGGCCAGGAAGAAAGGGCCCCTAGTTTTTGGAGAGCCCATTGCCGCCAGCCT
GGGGACCGATGGCACCCATTACTGGAGCAAGAACTGGGCCAAGGCTGCGGCGTTCGTGACTTCCCCTCCCCTGAGCCCGGACCCTACCAC
GCCCGACTACTTGACCTCCCTACTGGCCTGTGGGGACTTGCAGGTCACAGGCAGCGGCCACTGTCCCTACAGCACTGCCCAGAAGGCGGT
GGGCAAGGACAACTTTACCCTGATCCCCGAGGGTGTCAACGGGATAGAGGAGCGGATGACGGTCGTCTGGGACAAGGCGGTGGCTACTGG
CAAAATGGATGAGAACCAGTTTGTCGCTGTCACCAGCACCAATGCAGCCAAGATCTTTAACCTGTACCCAAGGAAAGGGCGGATTGCCGT
GGGCTCGGATGCCGACGTGGTCATCTGGGACCCCGACAAGTTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGTGGAGTACAACAT
CTTCGAGGGTATGGAGTGCCACGGCTCCCCACTAGTGGTCATCAGCCAGGGCAAGATCGTCTTTGAAGACGGAAACATCAACGTCAACAA
GGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTTTGGATTGCAAGG
GGTTTCCAGGGGCATGTATGACGGTCCTGTGTACGAGGTACCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCC
TTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCCAGATAGATGACAACAATCCCAGGCG
CACCGGCCACCGCATCGTGGCGCCCCCTGGTGGCCGCTCCAACATCACCAGCCTCGGTTGAACGTGGATGCGCGGAGGAGCTAGCCTGAA
GGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTGCTGATGGAGGGAGGGGGAAGTCG
AAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAATTCCTTGCCCCACAGTTGTGTTCAT
GCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGTGAACCACAGGTTTTAGCATTGTCTTGTTCTGTCCCTTCCACTTC
TAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGTTGATGCATGTTACTAAATTACG
TATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCA
AAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGATCCGT
GAATTCTCGGAATGGCAGGGGAAGCCTTGCACTAGGTTGCAGAGAAGCATCCTCCACATCCTGTGTCAGAAACCCTGGTCTCCGTGGCAC
TTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCTTCAGGCCGAGCCAGGTTCACACTCAGAAAGAG
GTCTCCCCATCCCCATTCGGGGCTGACGATGGGGGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGACGG
GGCAGTCAGATTTTTAAAGTTTTGTACAAAGTTTTCCTTTGTAATCACTCCCATTTTTACTTAACAACCAACTTGTTGTGGCTCTTATTT

>In-frame_ENST00000264449_ENST00000324989_TCGA-25-1324_ATP8A1_chr4_42626552_-_CRMP1_chr4_5844888_length(amino acids)=486AA_start in transcript=220_stop in transcript=1680
MPTMRRTVSEIRSRAEGYEKTDDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQI
PDVSPTGRYTTLVPLLFILAVAAIKEIIEDIEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIIAL
ARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVN
GIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVV
ISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQ

--------------------------------------------------------------
>In-frame_ENST00000264449_ENST00000397890_TCGA-25-1324_ATP8A1_chr4_42626552_-_CRMP1_chr4_5844888_length(transcript)=2658nt_BP=583nt
AGCTCTGCGGGCGCCGCCACCTTCGCCGCCACCGCTGCCTTTCTCCTCCTCCTGTCGGCGTGCGGGGGCCGCGCCCGGCGGCAGCTCTGC
CCTAGGTGGGCGGCGGCGCGGCCCAGGCTGCAGCTGAGCGCTCTGCGCGGCGCAGCCGGGTCTCCCGCGTGTACCACGCCGTGACAGGTG
CAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTCGCGCGCCGAAGG
TTATGAGAAGACAGATGATGTTTCAGAGAAGACCTCACTGGCTGACCAGGAGGAAGTAAGGACTATTTTCATCAACCAGCCCCAGCTGAC
AAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAACATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTTCAGAAGAGCTGC
TAATTCATTTTTTCTCTTTATTGCACTGCTGCAGCAAATACCTGATGTGTCACCAACAGGTCGTTATACAACACTGGTTCCTCTCTTATT
TATTTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGATATTGAACAAAAGCGGATCCTGGAGATGGGCATCACGGGTCCCGAGGGCCA
TGCCCTGAGCAGACCTGAAGAGCTGGAGGCCGAGGCGGTGTTCCGGGCCATCACCATTGCGGGCCGGATCAACTGCCCTGTGTACATCAC
CAAGGTCATGAGCAAGAGTGCAGCCGACATCATCGCTCTGGCCAGGAAGAAAGGGCCCCTAGTTTTTGGAGAGCCCATTGCCGCCAGCCT
GGGGACCGATGGCACCCATTACTGGAGCAAGAACTGGGCCAAGGCTGCGGCGTTCGTGACTTCCCCTCCCCTGAGCCCGGACCCTACCAC
GCCCGACTACTTGACCTCCCTACTGGCCTGTGGGGACTTGCAGGTCACAGGCAGCGGCCACTGTCCCTACAGCACTGCCCAGAAGGCGGT
GGGCAAGGACAACTTTACCCTGATCCCCGAGGGTGTCAACGGGATAGAGGAGCGGATGACGGTCGTCTGGGACAAGGCGGTGGCTACTGG
CAAAATGGATGAGAACCAGTTTGTCGCTGTCACCAGCACCAATGCAGCCAAGATCTTTAACCTGTACCCAAGGAAAGGGCGGATTGCCGT
GGGCTCGGATGCCGACGTGGTCATCTGGGACCCCGACAAGTTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGTGGAGTACAACAT
CTTCGAGGGTATGGAGTGCCACGGCTCCCCACTAGTGGTCATCAGCCAGGGCAAGATCGTCTTTGAAGACGGAAACATCAACGTCAACAA
GGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTTTGGATTGCAAGG
GGTTTCCAGGGGCATGTATGACGGTCCTGTGTACGAGGTACCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCC
TTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCCAGATAGATGACAACAATCCCAGGCG
CACCGGCCACCGCATCGTGGCGCCCCCTGGTGGCCGCTCCAACATCACCAGCCTCGGTTGAACGTGGATGCGCGGAGGAGCTAGCCTGAA
GGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTGCTGATGGAGGGAGGGGGAAGTCG
AAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAATTCCTTGCCCCACAGTTGTGTTCAT
GCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGTGAACCACAGGTTTTAGCATTGTCTTGTTCTGTCCCTTCCACTTC
TAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGTTGATGCATGTTACTAAATTACG
TATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCA
AAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGATCCGT
GAATTCTCGGAATGGCAGGGGAAGCCTTGCACTAGGTTGCAGAGAAGCATCCTCCACATCCTGTGTCAGAAACCCTGGTCTCCGTGGCAC
TTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCTTCAGGCCGAGCCAGGTTCACACTCAGAAAGAG
GTCTCCCCATCCCCATTCGGGGCTGACGATGGGGGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGACGG
GGCAGTCAGATTTTTAAAGTTTTGTACAAAGTTTTCCTTTGTAATCACTCCCATTTTTACTTAACAACCAACTTGTTGTGGCTCTTATTT

>In-frame_ENST00000264449_ENST00000397890_TCGA-25-1324_ATP8A1_chr4_42626552_-_CRMP1_chr4_5844888_length(amino acids)=486AA_start in transcript=220_stop in transcript=1680
MPTMRRTVSEIRSRAEGYEKTDDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQI
PDVSPTGRYTTLVPLLFILAVAAIKEIIEDIEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIIAL
ARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVN
GIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVV
ISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQ

--------------------------------------------------------------

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Fusion Gene PPI Analysis for ATP8A1-CRMP1


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for ATP8A1-CRMP1


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for ATP8A1-CRMP1


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgeneCRMP1C0036341Schizophrenia1PSYGENET
TgeneCRMP1C3178803Social Anhedonia1PSYGENET