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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:SMARCAD1-GRID2 (FusionGDB2 ID:83332)

Fusion Gene Summary for SMARCAD1-GRID2

check button Fusion gene summary
Fusion gene informationFusion gene name: SMARCAD1-GRID2
Fusion gene ID: 83332
HgeneTgene
Gene symbol

SMARCAD1

GRID2

Gene ID

56916

2895

Gene nameSWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1glutamate ionotropic receptor delta type subunit 2
SynonymsADERM|BASNS|ETL1|HEL1|HRZGluD2|SCAR18
Cytomap

4q22.3

4q22.1-q22.2

Type of geneprotein-codingprotein-coding
DescriptionSWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1ATP-dependent helicase 1glutamate receptor ionotropic, delta-2gluR delta-2 subunitglutamate receptor delta-2 subunitglutamate receptor, ionotropic, delta 2
Modification date2020031320200313
UniProtAcc.

A4D2P6

Ensembl transtripts involved in fusion geneENST00000457823, ENST00000354268, 
ENST00000509418, 		ENST00000282020, 
ENST00000505687, ENST00000510992, 
Fusion gene scores* DoF score3 X 4 X 4=4812 X 15 X 7=1260
# samples 413
** MAII scorelog2(4/48*10)=-0.263034405833794
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(13/1260*10)=-3.27684020535882
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: SMARCAD1 [Title/Abstract] AND GRID2 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointSMARCAD1(95174158)-GRID2(94128554), # samples:2
SMARCAD1(95174158)-GRID2(94547420), # samples:2
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across SMARCAD1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across GRID2 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4ESCATCGA-LN-A4A1SMARCAD1chr4

95174158

+GRID2chr4

94128554

+
ChimerDB4ESCATCGA-LN-A4A1SMARCAD1chr4

95174158

+GRID2chr4

94128554

+
ChimerDB4ESCATCGA-LN-A4A1SMARCAD1chr4

95174822

+GRID2chr4

94128554

+
ChimerDB4LGGTCGA-DU-A7TDSMARCAD1chr4

95174158

+GRID2chr4

94547419

+
ChimerDB4ESCATCGA-LN-A4A1SMARCAD1chr4

95174158

+GRID2chr4

94128555

+
ChimerDB4LGGTCGA-DU-A7TDSMARCAD1chr4

95174158

+GRID2chr4

94547420

+
ChimerDB4LGGTCGA-DU-A7TD-01ASMARCAD1chr4

95174158

-GRID2chr4

94547420

+


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Fusion Gene ORF analysis for SMARCAD1-GRID2

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000457823ENST00000282020SMARCAD1chr4

95174158

+GRID2chr4

94128554

+
5CDS-3UTRENST00000457823ENST00000505687SMARCAD1chr4

95174158

+GRID2chr4

94128554

+
5CDS-3UTRENST00000457823ENST00000510992SMARCAD1chr4

95174158

+GRID2chr4

94128554

+
In-frameENST00000354268ENST00000282020SMARCAD1chr4

95174158

+GRID2chr4

94128554

+
5CDS-3UTRENST00000354268ENST00000505687SMARCAD1chr4

95174158

+GRID2chr4

94128554

+
5CDS-3UTRENST00000354268ENST00000510992SMARCAD1chr4

95174158

+GRID2chr4

94128554

+
intron-3CDSENST00000509418ENST00000282020SMARCAD1chr4

95174158

+GRID2chr4

94128554

+
intron-3UTRENST00000509418ENST00000505687SMARCAD1chr4

95174158

+GRID2chr4

94128554

+
intron-3UTRENST00000509418ENST00000510992SMARCAD1chr4

95174158

+GRID2chr4

94128554

+
intron-3CDSENST00000457823ENST00000282020SMARCAD1chr4

95174822

+GRID2chr4

94128554

+
intron-3UTRENST00000457823ENST00000505687SMARCAD1chr4

95174822

+GRID2chr4

94128554

+
intron-3UTRENST00000457823ENST00000510992SMARCAD1chr4

95174822

+GRID2chr4

94128554

+
intron-3CDSENST00000354268ENST00000282020SMARCAD1chr4

95174822

+GRID2chr4

94128554

+
intron-3UTRENST00000354268ENST00000505687SMARCAD1chr4

95174822

+GRID2chr4

94128554

+
intron-3UTRENST00000354268ENST00000510992SMARCAD1chr4

95174822

+GRID2chr4

94128554

+
5UTR-3CDSENST00000509418ENST00000282020SMARCAD1chr4

95174822

+GRID2chr4

94128554

+
5UTR-3UTRENST00000509418ENST00000505687SMARCAD1chr4

95174822

+GRID2chr4

94128554

+
5UTR-3UTRENST00000509418ENST00000510992SMARCAD1chr4

95174822

+GRID2chr4

94128554

+
In-frameENST00000457823ENST00000282020SMARCAD1chr4

95174158

+GRID2chr4

94547419

+
5CDS-intronENST00000457823ENST00000505687SMARCAD1chr4

95174158

+GRID2chr4

94547419

+
5CDS-intronENST00000457823ENST00000510992SMARCAD1chr4

95174158

+GRID2chr4

94547419

+
In-frameENST00000354268ENST00000282020SMARCAD1chr4

95174158

+GRID2chr4

94547419

+
5CDS-intronENST00000354268ENST00000505687SMARCAD1chr4

95174158

+GRID2chr4

94547419

+
5CDS-intronENST00000354268ENST00000510992SMARCAD1chr4

95174158

+GRID2chr4

94547419

+
intron-3CDSENST00000509418ENST00000282020SMARCAD1chr4

95174158

+GRID2chr4

94547419

+
intron-intronENST00000509418ENST00000505687SMARCAD1chr4

95174158

+GRID2chr4

94547419

+
intron-intronENST00000509418ENST00000510992SMARCAD1chr4

95174158

+GRID2chr4

94547419

+
In-frameENST00000457823ENST00000282020SMARCAD1chr4

95174158

+GRID2chr4

94128555

+
5CDS-3UTRENST00000457823ENST00000505687SMARCAD1chr4

95174158

+GRID2chr4

94128555

+
5CDS-3UTRENST00000457823ENST00000510992SMARCAD1chr4

95174158

+GRID2chr4

94128555

+
In-frameENST00000354268ENST00000282020SMARCAD1chr4

95174158

+GRID2chr4

94128555

+
5CDS-3UTRENST00000354268ENST00000505687SMARCAD1chr4

95174158

+GRID2chr4

94128555

+
5CDS-3UTRENST00000354268ENST00000510992SMARCAD1chr4

95174158

+GRID2chr4

94128555

+
intron-3CDSENST00000509418ENST00000282020SMARCAD1chr4

95174158

+GRID2chr4

94128555

+
intron-3UTRENST00000509418ENST00000505687SMARCAD1chr4

95174158

+GRID2chr4

94128555

+
intron-3UTRENST00000509418ENST00000510992SMARCAD1chr4

95174158

+GRID2chr4

94128555

+
In-frameENST00000457823ENST00000282020SMARCAD1chr4

95174158

+GRID2chr4

94547420

+
5CDS-intronENST00000457823ENST00000505687SMARCAD1chr4

95174158

+GRID2chr4

94547420

+
5CDS-intronENST00000457823ENST00000510992SMARCAD1chr4

95174158

+GRID2chr4

94547420

+
In-frameENST00000354268ENST00000282020SMARCAD1chr4

95174158

+GRID2chr4

94547420

+
5CDS-intronENST00000354268ENST00000505687SMARCAD1chr4

95174158

+GRID2chr4

94547420

+
5CDS-intronENST00000354268ENST00000510992SMARCAD1chr4

95174158

+GRID2chr4

94547420

+
intron-3CDSENST00000509418ENST00000282020SMARCAD1chr4

95174158

+GRID2chr4

94547420

+
intron-intronENST00000509418ENST00000505687SMARCAD1chr4

95174158

+GRID2chr4

94547420

+
intron-intronENST00000509418ENST00000510992SMARCAD1chr4

95174158

+GRID2chr4

94547420

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000457823SMARCAD1chr495174158+ENST00000282020GRID2chr494128554+5903155627538441189
ENST00000354268SMARCAD1chr495174158+ENST00000282020GRID2chr494128554+570113547336421189
ENST00000457823SMARCAD1chr495174158+ENST00000282020GRID2chr494547419+444515562752386703
ENST00000354268SMARCAD1chr495174158+ENST00000282020GRID2chr494547419+42431354732184703
ENST00000457823SMARCAD1chr495174158+ENST00000282020GRID2chr494128555+5903155627538441189
ENST00000354268SMARCAD1chr495174158+ENST00000282020GRID2chr494128555+570113547336421189
ENST00000457823SMARCAD1chr495174158+ENST00000282020GRID2chr494547420+444515562752386703
ENST00000354268SMARCAD1chr495174158+ENST00000282020GRID2chr494547420+42431354732184703

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000457823ENST00000282020SMARCAD1chr495174158+GRID2chr494128554+0.0001934590.9998066
ENST00000354268ENST00000282020SMARCAD1chr495174158+GRID2chr494128554+0.0001498050.99985015
ENST00000457823ENST00000282020SMARCAD1chr495174158+GRID2chr494547419+0.0005497960.99945015
ENST00000354268ENST00000282020SMARCAD1chr495174158+GRID2chr494547419+0.0005180890.999482
ENST00000457823ENST00000282020SMARCAD1chr495174158+GRID2chr494128555+0.0001934590.9998066
ENST00000354268ENST00000282020SMARCAD1chr495174158+GRID2chr494128555+0.0001498050.99985015
ENST00000457823ENST00000282020SMARCAD1chr495174158+GRID2chr494547420+0.0005497960.99945015
ENST00000354268ENST00000282020SMARCAD1chr495174158+GRID2chr494547420+0.0005180890.999482

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Fusion Genomic Features for SMARCAD1-GRID2


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
SMARCAD1chr495174822+GRID2chr494128554+0.0032955520.9967045
SMARCAD1chr495174158+GRID2chr494128554+6.18E-060.9999938
SMARCAD1chr495174158+GRID2chr494547419+6.17E-080.9999999
SMARCAD1chr495174822+GRID2chr494128554+0.0032955520.9967045
SMARCAD1chr495174158+GRID2chr494128554+6.18E-060.9999938
SMARCAD1chr495174158+GRID2chr494547419+6.17E-080.9999999

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for SMARCAD1-GRID2


check button Go to

FGviewer for the breakpoints of chr4:95174158-chr4:94128554

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.GRID2

A4D2P6

FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Postsynaptic scaffolding protein at the parallel fiber-Purkinje cell synapse, where it may serve to link GRID2 with actin cytoskeleton and various signaling molecules. {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000354268+924157_199427.01027.0DomainCUE 1
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000354268+924251_294427.01027.0DomainCUE 2
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000457823+924157_199427.01029.0DomainCUE 1
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000457823+924251_294427.01029.0DomainCUE 2
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000354268+924157_199427.01027.0DomainCUE 1
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000354268+924251_294427.01027.0DomainCUE 2
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000457823+924157_199427.01029.0DomainCUE 1
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000457823+924251_294427.01029.0DomainCUE 2
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000354268+924157_199427.01027.0DomainCUE 1
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000354268+924251_294427.01027.0DomainCUE 2
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000457823+924157_199427.01029.0DomainCUE 1
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000457823+924251_294427.01029.0DomainCUE 2
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000354268+924157_199427.01027.0DomainCUE 1
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000354268+924251_294427.01027.0DomainCUE 2
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000457823+924157_199427.01029.0DomainCUE 1
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000457823+924251_294427.01029.0DomainCUE 2
TgeneGRID2chr4:95174158chr4:94128554ENST000002820203161005_1007245.01008.0MotifPDZ-binding
TgeneGRID2chr4:95174158chr4:94128555ENST000002820203161005_1007245.01008.0MotifPDZ-binding
TgeneGRID2chr4:95174158chr4:94547419ENST0000028202012161005_1007731.01008.0MotifPDZ-binding
TgeneGRID2chr4:95174158chr4:94547420ENST0000028202012161005_1007731.01008.0MotifPDZ-binding
TgeneGRID2chr4:95174158chr4:94128554ENST00000282020316588_635245.01008.0Topological domainCytoplasmic
TgeneGRID2chr4:95174158chr4:94128554ENST00000282020316657_830245.01008.0Topological domainExtracellular
TgeneGRID2chr4:95174158chr4:94128554ENST00000282020316852_1007245.01008.0Topological domainCytoplasmic
TgeneGRID2chr4:95174158chr4:94128555ENST00000282020316588_635245.01008.0Topological domainCytoplasmic
TgeneGRID2chr4:95174158chr4:94128555ENST00000282020316657_830245.01008.0Topological domainExtracellular
TgeneGRID2chr4:95174158chr4:94128555ENST00000282020316852_1007245.01008.0Topological domainCytoplasmic
TgeneGRID2chr4:95174158chr4:94547419ENST000002820201216852_1007731.01008.0Topological domainCytoplasmic
TgeneGRID2chr4:95174158chr4:94547420ENST000002820201216852_1007731.01008.0Topological domainCytoplasmic
TgeneGRID2chr4:95174158chr4:94128554ENST00000282020316567_587245.01008.0TransmembraneHelical
TgeneGRID2chr4:95174158chr4:94128554ENST00000282020316636_656245.01008.0TransmembraneHelical
TgeneGRID2chr4:95174158chr4:94128554ENST00000282020316831_851245.01008.0TransmembraneHelical
TgeneGRID2chr4:95174158chr4:94128555ENST00000282020316567_587245.01008.0TransmembraneHelical
TgeneGRID2chr4:95174158chr4:94128555ENST00000282020316636_656245.01008.0TransmembraneHelical
TgeneGRID2chr4:95174158chr4:94128555ENST00000282020316831_851245.01008.0TransmembraneHelical
TgeneGRID2chr4:95174158chr4:94547419ENST000002820201216831_851731.01008.0TransmembraneHelical
TgeneGRID2chr4:95174158chr4:94547420ENST000002820201216831_851731.01008.0TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000354268+924509_677427.01027.0DomainHelicase ATP-binding
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000354268+924858_1010427.01027.0DomainHelicase C-terminal
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000457823+924509_677427.01029.0DomainHelicase ATP-binding
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000457823+924858_1010427.01029.0DomainHelicase C-terminal
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000509418+116157_1990597.0DomainCUE 1
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000509418+116251_2940597.0DomainCUE 2
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000509418+116509_6770597.0DomainHelicase ATP-binding
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000509418+116858_10100597.0DomainHelicase C-terminal
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000354268+924509_677427.01027.0DomainHelicase ATP-binding
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000354268+924858_1010427.01027.0DomainHelicase C-terminal
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000457823+924509_677427.01029.0DomainHelicase ATP-binding
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000457823+924858_1010427.01029.0DomainHelicase C-terminal
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000509418+116157_1990597.0DomainCUE 1
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000509418+116251_2940597.0DomainCUE 2
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000509418+116509_6770597.0DomainHelicase ATP-binding
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000509418+116858_10100597.0DomainHelicase C-terminal
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000354268+924509_677427.01027.0DomainHelicase ATP-binding
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000354268+924858_1010427.01027.0DomainHelicase C-terminal
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000457823+924509_677427.01029.0DomainHelicase ATP-binding
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000457823+924858_1010427.01029.0DomainHelicase C-terminal
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000509418+116157_1990597.0DomainCUE 1
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000509418+116251_2940597.0DomainCUE 2
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000509418+116509_6770597.0DomainHelicase ATP-binding
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000509418+116858_10100597.0DomainHelicase C-terminal
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000354268+924509_677427.01027.0DomainHelicase ATP-binding
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000354268+924858_1010427.01027.0DomainHelicase C-terminal
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000457823+924509_677427.01029.0DomainHelicase ATP-binding
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000457823+924858_1010427.01029.0DomainHelicase C-terminal
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000509418+116157_1990597.0DomainCUE 1
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000509418+116251_2940597.0DomainCUE 2
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000509418+116509_6770597.0DomainHelicase ATP-binding
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000509418+116858_10100597.0DomainHelicase C-terminal
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000354268+9241005_1008427.01027.0MotifNote=DEGD box
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000354268+924628_631427.01027.0MotifNote=DEGH box
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000354268+924721_738427.01027.0MotifNuclear localization signal
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000457823+9241005_1008427.01029.0MotifNote=DEGD box
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000457823+924628_631427.01029.0MotifNote=DEGH box
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000457823+924721_738427.01029.0MotifNuclear localization signal
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000509418+1161005_10080597.0MotifNote=DEGD box
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000509418+116628_6310597.0MotifNote=DEGH box
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000509418+116721_7380597.0MotifNuclear localization signal
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000354268+9241005_1008427.01027.0MotifNote=DEGD box
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000354268+924628_631427.01027.0MotifNote=DEGH box
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000354268+924721_738427.01027.0MotifNuclear localization signal
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000457823+9241005_1008427.01029.0MotifNote=DEGD box
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000457823+924628_631427.01029.0MotifNote=DEGH box
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000457823+924721_738427.01029.0MotifNuclear localization signal
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000509418+1161005_10080597.0MotifNote=DEGD box
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000509418+116628_6310597.0MotifNote=DEGH box
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000509418+116721_7380597.0MotifNuclear localization signal
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000354268+9241005_1008427.01027.0MotifNote=DEGD box
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000354268+924628_631427.01027.0MotifNote=DEGH box
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000354268+924721_738427.01027.0MotifNuclear localization signal
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000457823+9241005_1008427.01029.0MotifNote=DEGD box
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000457823+924628_631427.01029.0MotifNote=DEGH box
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000457823+924721_738427.01029.0MotifNuclear localization signal
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000509418+1161005_10080597.0MotifNote=DEGD box
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000509418+116628_6310597.0MotifNote=DEGH box
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000509418+116721_7380597.0MotifNuclear localization signal
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000354268+9241005_1008427.01027.0MotifNote=DEGD box
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000354268+924628_631427.01027.0MotifNote=DEGH box
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000354268+924721_738427.01027.0MotifNuclear localization signal
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000457823+9241005_1008427.01029.0MotifNote=DEGD box
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000457823+924628_631427.01029.0MotifNote=DEGH box
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000457823+924721_738427.01029.0MotifNuclear localization signal
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000509418+1161005_10080597.0MotifNote=DEGD box
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000509418+116628_6310597.0MotifNote=DEGH box
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000509418+116721_7380597.0MotifNuclear localization signal
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000354268+924521_529427.01027.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000354268+924897_904427.01027.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000457823+924521_529427.01029.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000457823+924897_904427.01029.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000509418+116521_5290597.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94128554ENST00000509418+116897_9040597.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000354268+924521_529427.01027.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000354268+924897_904427.01027.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000457823+924521_529427.01029.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000457823+924897_904427.01029.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000509418+116521_5290597.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94128555ENST00000509418+116897_9040597.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000354268+924521_529427.01027.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000354268+924897_904427.01027.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000457823+924521_529427.01029.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000457823+924897_904427.01029.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000509418+116521_5290597.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94547419ENST00000509418+116897_9040597.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000354268+924521_529427.01027.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000354268+924897_904427.01027.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000457823+924521_529427.01029.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000457823+924897_904427.01029.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000509418+116521_5290597.0Nucleotide bindingATP
HgeneSMARCAD1chr4:95174158chr4:94547420ENST00000509418+116897_9040597.0Nucleotide bindingATP
TgeneGRID2chr4:95174158chr4:94128554ENST0000028202031624_566245.01008.0Topological domainExtracellular
TgeneGRID2chr4:95174158chr4:94128555ENST0000028202031624_566245.01008.0Topological domainExtracellular
TgeneGRID2chr4:95174158chr4:94547419ENST00000282020121624_566731.01008.0Topological domainExtracellular
TgeneGRID2chr4:95174158chr4:94547419ENST000002820201216588_635731.01008.0Topological domainCytoplasmic
TgeneGRID2chr4:95174158chr4:94547419ENST000002820201216657_830731.01008.0Topological domainExtracellular
TgeneGRID2chr4:95174158chr4:94547420ENST00000282020121624_566731.01008.0Topological domainExtracellular
TgeneGRID2chr4:95174158chr4:94547420ENST000002820201216588_635731.01008.0Topological domainCytoplasmic
TgeneGRID2chr4:95174158chr4:94547420ENST000002820201216657_830731.01008.0Topological domainExtracellular
TgeneGRID2chr4:95174158chr4:94547419ENST000002820201216567_587731.01008.0TransmembraneHelical
TgeneGRID2chr4:95174158chr4:94547419ENST000002820201216636_656731.01008.0TransmembraneHelical
TgeneGRID2chr4:95174158chr4:94547420ENST000002820201216567_587731.01008.0TransmembraneHelical
TgeneGRID2chr4:95174158chr4:94547420ENST000002820201216636_656731.01008.0TransmembraneHelical


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Fusion Gene Sequence for SMARCAD1-GRID2


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000457823_ENST00000282020_TCGA-LN-A4A1_SMARCAD1_chr4_95174158_+_GRID2_chr4_94128554_length(transcript)=5903nt_BP=1556nt
CTCTCAGCTGGGATCGCGCCGCGTCAACTTCCGGGCGGATGCCCGCCAGCACGGCCTCCGCCGCTCCCCTTCTTTGGCCCCTTTGTGTCC
CCGCAGTGTCGAGGCGCGGGCCCTGGCAGGTCCTTTCTCGAGGCAGGGGGCACGGTAGCACAGGGAGCTTCTCTTTGTGGGCGGGCGCGA
GGCCCGCTAGGGGGTTATACTGGGGAACGTGCCTGCGCGTGCTTGGATAGTTCATTTAAAGCCCCCATCCCTGCAAGGTGGTGCTTTCTA
CCAATATGAATCTTTTCAACCTGGACCGTTTTCGCTTTGAGAAAAGGAATAAGATTGAGGAAGCGCCCGAAGCAACCCCTCAACCTTCCC
AGCCTGGCCCTTCTTCACCAATTTCTCTTAGTGCTGAAGAGGAGAATGCTGAAGGGGAAGTTAGCAGGGCAAACACTCCTGATTCAGATA
TAACTGAAAAAACAGAAGATTCTAGTGTTCCAGAAACTCCAGATAATGAAAGAAAAGCAAGTATATCATATTTCAAAAATCAAAGAGGAA
TACAGTATATTGATTTGTCTTCTGATAGTGAAGATGTCGTTTCCCCAAATTGCTCCAATACAGTTCAAGAGAAAACATTCAACAAAGATA
CAGTGATTATAGTTTCTGAGCCATCTGAAGATGAAGAGTCCCAAGGCCTTCCTACCATGGCACGTAGAAATGATGATATTTCAGAACTGG
AAGACCTTTCGGAATTGGAAGACCTTAAAGATGCTAAACTTCAGACTTTGAAGGAACTTTTTCCACAAAGAAGTGACAATGATTTACTTA
AGTTGATTGAATCAACAAGCACTATGGATGGAGCAATTGCTGCTGCCTTGCTGATGTTTGGTGATGCAGGTGGTGGGCCCAGGAAAAGAA
AATTATCTTCTTCTTCAGAGCCATATGAGGAAGATGAATTTAATGATGATCAATCTATAAAAAAGACAAGACTGGATCATGGAGAGGAAT
CAAATGAGTCTGCAGAATCTAGCAGTAATTGGGAAAAGCAGGAAAGTATTGTACTGAAATTGCAAAAGGAATTTCCCAATTTTGATAAAC
AGGAACTTAGAGAAGTACTCAAGGAACATGAATGGATGTACACAGAAGCTTTAGAATCTCTAAAAGTGTTTGCAGAAGACCAAGATATGC
AATATGTATCACAAAGTGAGGTTCCAAATGGAAAAGAAGTTTCTTCAAGAAGTCAAAATTACCCTAAAAATGCAACTAAAACAAAACTAA
AACAGAAATTTTCAATGAAAGCACAAAATGGCTTTAACAAGAAACGTAAAAAAAATGTTTTTAATCCAAAGAGAGTTGTTGAAGACTCTG
AATATGATTCAGGTTCTGATGTCGGTAGTTCACTAGATGAGGACTATAGTAGTGGTGAAGAAGTGATGGAGGATGGCTATAAAGGTAAAA
TTCTTCACTTCCTTCAAGATGCTTCAATTGGTGAACTTACTTTGATTCCTCAGTGTTCTCAGAAAAAGGCTCAGAAGATAACAGAACTCC
GGCCCTTTAATAGTTGGGAGGCTCTGGTTGTGGAGACTAATTTGGTTGCTTTTGACTGTCACTGGATCATTATAAATGAGGAAATAAACG
ATGTGGACGTACAGGAACTTGTAAGAAGGTCAATTGGAAGGTTAACGATTATTCGGCAGACATTTCCAGTTCCCCAGAACATAAGTCAGC
GGTGTTTCCGTGGCAACCATCGAATATCTTCAACATTGTGTGATCCAAAGGATCCATTTGCTCAGAATATGGAGATTTCCAACCTTTACA
TATATGACACGGTGCTTCTGCTTGCTAATGCTTTTCATAAGAAGCTGGAGGACCGAAAGTGGCACAGCATGGCAAGTCTGTCATGTATCA
GAAAGAACTCAAAGCCCTGGCAGGGTGGGCGCTCCATGTTGGAGACCATCAAGAAGGGTGGAGTTAGTGGGTTGACTGGAGAGCTAGAAT
TTGGAGAAAATGGAGGCAATCCCAATGTCCACTTTGAAATCCTTGGAACCAACTATGGAGAAGAGCTTGGCAGAGGTGTTCGAAAACTTG
GTTGCTGGAATCCTGTCACAGGTCTGAATGGGTCACTGACTGACAAGAAATTGGAGAATAACATGCGTGGAGTGGTTCTACGTGTAGTAA
CTGTTCTGGAAGAACCTTTTGTGATGGTCTCTGAAAATGTCTTGGGTAAGCCGAAGAAATACCAGGGCTTCTCCATTGATGTTTTGGATG
CCTTATCTAACTACCTGGGTTTTAACTACGAAATTTACGTAGCACCGGATCACAAATACGGAAGCCCACAAGAAGATGGGACATGGAATG
GCTTGGTAGGAGAACTTGTCTTTAAGAGAGCCGACATAGGGATTTCTGCTTTAACCATCACTCCAGATCGTGAAAATGTGGTGGACTTTA
CGACACGTTACATGGACTACTCAGTGGGGGTACTACTTCGAAGGGCTGAAAAGACAGTGGATATGTTTGCCTGTCTTGCACCATTTGATC
TCTCTCTATGGGCTTGCATTGCTGGCACAGTCCTTCTGGTGGGTCTACTGGTCTACCTCTTGAACTGGCTTAATCCCCCACGATTACAAA
TGGGATCAATGACGTCTACTACTCTCTACAACTCCATGTGGTTTGTGTATGGATCTTTTGTACAACAAGGCGGGGAAGTCCCGTACACGA
CTCTGGCTACCCGAATGATGATGGGGGCTTGGTGGCTATTTGCTTTGATTGTTATCTCATCTTACACGGCAAACCTCGCTGCTTTCCTCA
CTATTACACGCATTGAAAGTTCCATCCAGTCTCTCCAGGACCTTTCCAAGCAAACAGAAATCCCTTATGGCACAGTCCTAGACTCTGCGG
TATATGAGCATGTCCGCATGAAAGGACTGAATCCTTTTGAGAGGGACAGCATGTATTCCCAAATGTGGCGGATGATCAACCGAAGCAATG
GATCGGAGAACAATGTTCTGGAGTCCCAGGCAGGCATTCAAAAGGTAAAATATGGAAATTATGCTTTCGTATGGGATGCAGCTGTATTGG
AATATGTGGCTATCAATGACCCAGATTGTTCCTTTTACACCATTGGAAATACTGTTGCTGATCGGGGATATGGAATTGCATTACAACATG
GCAGTCCTTACCGAGATGTTTTTTCACAAAGGATCCTGGAGCTTCAGCAGAATGGTGACATGGACATCCTGAAGCACAAATGGTGGCCTA
AGAATGGCCAGTGTGACCTGTACTCGTCAGTGGACACAAAGCAGAAAGGAGGCGCCCTGGACATAAAGAGCTTTGCAGGGGTCTTTTGTA
TCCTGGCTGCTGGAATTGTCCTCTCCTGCTTCATAGCCATGCTGGAGACGTGGTGGAACAAGAGGAAAGGCTCCCGGGTTCCATCAAAAG
AGGATGACAAGGAAATTGACCTGGAGCACCTCCATAGACGTGTAAATAGCTTGTGCACAGATGACGACAGCCCCCATAAACAGTTTTCCA
CCTCGTCAATTGATTTGACCCCTCTGGACATTGACACTTTGCCAACACGACAAGCACTGGAGCAAATCAGTGATTTCAGGAACACTCATA
TTACCACAACAACCTTTATCCCAGAGCAGATCCAGACTCTTAGCCGCACACTGTCAGCTAAAGCTGCTTCTGGTTTCACTTTTGGCAACG
TGCCTGAGCACCGAACTGGCCCTTTTAGGCACAGGGCACCTAATGGGGGCTTTTTCAGGAGTCCTATAAAAACAATGTCATCTATTCCTT
ATCAACCAACTCCTACCCTGGGGCTCAATCTGGGTAATGATCCAGACCGAGGCACCTCCATATGAGCATCAAACAAATCTCTTCACTGTT
TCTTTTTTAGGACTCCCTTTGCAAGGAGCAACTGTAATATTGTGGGACTAACATGGATGTAACGTTTAAAAAAAAGATCAGGATTATTAG
TAACAATTCTAGTTTTTTCCTCCCACCTTCTCCCTCTCCTCTCTCCTCTATGATTTTCTCTCTTTCCCCCTCCCTTCCTGTACATTTTCC
TCCACTTTTTTTCATTACTCAACTTGTTCCCCAAGAAGGTAGTGTACTAGGATCCTATTAGTCTGCTTTTCATATACTGTACATCAAGTA
TAGGAAATGTGCACTGAGTATACTAAAAGTATATGCAGGATTAATTTTACATAAAGGCCTCTTCTGTAACATTTCTCTATTTTTTGAAAT
ACAATTGCAATAACTTCAGTCTTTTTACATTCTTCTGCTGCATCCATACAATGCTCCACTGCTGTTGAGTGTCCTTTAACTGTGGACCAA
AGGCAACCCCTGCAGTGTTTATAAAACAATTTTAAGACCATTCAGGCCACATAAGATGAGAATGCAATTTTGTAGGATTACAAAAAAGCC
ATTAATATGCCAGTCAAGACTACAGTTAAAACTACTCTTGCACTGCAACAGTGCATATGACCTTTATGTGATTGTACAGTATTAAAAGTT
TTTTCTTATGTACAGTAAACTTTATCATATGGCAGAAGCCTCTATTGTGTTAAATAAATTAGTATTTCATATATATACATATATATGCAC
CTATATAATGTGTATATATATAAAAAGGCAGCCATTGCTATTGCAATTCATTTAATAAAGCTTTAGTTTAAACAAAAGTATTGTATACAG
GAACTATGTATAGTGCAGGGGTTCTTTTCAGTTAGAAAAGGCAGGTTGCTTTAATGTTATTCTGACTCGCATTGTTTGCCAACAGAAAAT
ATTTTATACTTTTGTTATTAAAGCATCCAGGGCAATTTAATATTTGTTCCTAGATGTAACTCATTTGAATAGGTTTTGCATTTGTTATTC
AGCAGTGTATAAAGCTAACCTTGATAATTTTACTTTTAATTAATTATCTAAATGAAAAATGCTATTAGCTGAACCACATCCACAACAGCA
CATAGAGCTCTAGAAGAGTTGAAACATAGATCATTGAAGGTTAAAAATCCTCTTCCAAAGCAGCAAGTCAATCAATACAATAATGATATT
TGGGGAGGGGTGGGAGCCCTTAAGAACTATTGATGTGGCCTTAAATTACTGTCATTTATTATCCTAAAGAAGAAAACATAATAACCATAA
TGGGCTCTCAACTCAACTCCCTTTTTTATTTAGTTCTATTTGGAGGAGTTATGTATTTTTTACATTAGTGCCAAGTATATAGAAGGATGA
CAGCAAAAACAGTGCCTCTTTGTGCACAATCCTTTTAAAGTAGCATTCTTACTTGTTAGAAATGTAGAATGAACTTTGTTTGTAATCCTT
AAATTAAAATGTGGTAAGTAGGAAGCAAGAACTTATTCTGTGTTTTTACGCAGCCATACACTTACTTTAATCTAACTCATTCTGTGGCTA
GGATTGATATAGGAATCAACCTATGTGATTTGCTTTAGGAGAAATTAAAAGGTATATTCTTAAGATATATTATATTTTGATGCTAATTCT
GTTCTGGGGAGCATCTTGTATTGTCACTGTTTTGTACTAAATCTTCAAATATTGTCTACTGTGTAAGGCAGAAAAATTTCTTATCATGCA
AAAACCATTTTGTTTCCAGGGTAACAAGTAACTAAGTGCATGCACAACTTGTTTTCCCTTGTAACATTCATGATCTCATTTACAACTCTG
ATTTTAAAACAAAAAAATCTTTACAACAAGCTATATAGGGACATACCAGATGTTGCAGTGATTTTAGCTATCAACAAACTGTTAACCATG
TACAATATTTAAAATAGGCTTATTTTGATGTATCGCCTATTATACAAACACACAAAACATTTTTGGAGGCCTCAGTTATGAGTGACAGAG

>In-frame_ENST00000457823_ENST00000282020_TCGA-LN-A4A1_SMARCAD1_chr4_95174158_+_GRID2_chr4_94128554_length(amino acids)=1189AA_start in transcript=275_stop in transcript=3844
MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQ
YIDLSSDSEDVVSPNCSNTVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKELFPQRSDNDLLKL
IESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSIKKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQE
LREVLKEHEWMYTEALESLKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVVEDSEY
DSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALVVETNLVAFDCHWIIINEEINDV
DVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYDTVLLLANAFHKKLEDRKWHSMASLSCIRK
NSKPWQGGRSMLETIKKGGVSGLTGELEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTGLNGSLTDKKLENNMRGVVLRVVTV
LEEPFVMVSENVLGKPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQEDGTWNGLVGELVFKRADIGISALTITPDRENVVDFTT
RYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTL
ATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTEIPYGTVLDSAVYEHVRMKGLNPFERDSMYSQMWRMINRSNGS
ENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAINDPDCSFYTIGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKN
GQCDLYSSVDTKQKGGALDIKSFAGVFCILAAGIVLSCFIAMLETWWNKRKGSRVPSKEDDKEIDLEHLHRRVNSLCTDDDSPHKQFSTS
SIDLTPLDIDTLPTRQALEQISDFRNTHITTTTFIPEQIQTLSRTLSAKAASGFTFGNVPEHRTGPFRHRAPNGGFFRSPIKTMSSIPYQ

--------------------------------------------------------------
>In-frame_ENST00000354268_ENST00000282020_TCGA-LN-A4A1_SMARCAD1_chr4_95174158_+_GRID2_chr4_94128554_length(transcript)=5701nt_BP=1354nt
GGGAACGTGCCTGCGCGTGCTTGGATAGTTCATTTAAAGCCCCCATCCCTGCAAGGTGGTGCTTTCTACCAATATGAATCTTTTCAACCT
GGACCGTTTTCGCTTTGAGAAAAGGAATAAGATTGAGGAAGCGCCCGAAGCAACCCCTCAACCTTCCCAGCCTGGCCCTTCTTCACCAAT
TTCTCTTAGTGCTGAAGAGGAGAATGCTGAAGGGGAAGTTAGCAGGGCAAACACTCCTGATTCAGATATAACTGAAAAAACAGAAGATTC
TAGTGTTCCAGAAACTCCAGATAATGAAAGAAAAGCAAGTATATCATATTTCAAAAATCAAAGAGGAATACAGTATATTGATTTGTCTTC
TGATAGTGAAGATGTCGTTTCCCCAAATTGCTCCAATACAGTTCAAGAGAAAACATTCAACAAAGATACAGTGATTATAGTTTCTGAGCC
ATCTGAAGATGAAGAGTCCCAAGGCCTTCCTACCATGGCACGTAGAAATGATGATATTTCAGAACTGGAAGACCTTTCGGAATTGGAAGA
CCTTAAAGATGCTAAACTTCAGACTTTGAAGGAACTTTTTCCACAAAGAAGTGACAATGATTTACTTAAGTTGATTGAATCAACAAGCAC
TATGGATGGAGCAATTGCTGCTGCCTTGCTGATGTTTGGTGATGCAGGTGGTGGGCCCAGGAAAAGAAAATTATCTTCTTCTTCAGAGCC
ATATGAGGAAGATGAATTTAATGATGATCAATCTATAAAAAAGACAAGACTGGATCATGGAGAGGAATCAAATGAGTCTGCAGAATCTAG
CAGTAATTGGGAAAAGCAGGAAAGTATTGTACTGAAATTGCAAAAGGAATTTCCCAATTTTGATAAACAGGAACTTAGAGAAGTACTCAA
GGAACATGAATGGATGTACACAGAAGCTTTAGAATCTCTAAAAGTGTTTGCAGAAGACCAAGATATGCAATATGTATCACAAAGTGAGGT
TCCAAATGGAAAAGAAGTTTCTTCAAGAAGTCAAAATTACCCTAAAAATGCAACTAAAACAAAACTAAAACAGAAATTTTCAATGAAAGC
ACAAAATGGCTTTAACAAGAAACGTAAAAAAAATGTTTTTAATCCAAAGAGAGTTGTTGAAGACTCTGAATATGATTCAGGTTCTGATGT
CGGTAGTTCACTAGATGAGGACTATAGTAGTGGTGAAGAAGTGATGGAGGATGGCTATAAAGGTAAAATTCTTCACTTCCTTCAAGATGC
TTCAATTGGTGAACTTACTTTGATTCCTCAGTGTTCTCAGAAAAAGGCTCAGAAGATAACAGAACTCCGGCCCTTTAATAGTTGGGAGGC
TCTGGTTGTGGAGACTAATTTGGTTGCTTTTGACTGTCACTGGATCATTATAAATGAGGAAATAAACGATGTGGACGTACAGGAACTTGT
AAGAAGGTCAATTGGAAGGTTAACGATTATTCGGCAGACATTTCCAGTTCCCCAGAACATAAGTCAGCGGTGTTTCCGTGGCAACCATCG
AATATCTTCAACATTGTGTGATCCAAAGGATCCATTTGCTCAGAATATGGAGATTTCCAACCTTTACATATATGACACGGTGCTTCTGCT
TGCTAATGCTTTTCATAAGAAGCTGGAGGACCGAAAGTGGCACAGCATGGCAAGTCTGTCATGTATCAGAAAGAACTCAAAGCCCTGGCA
GGGTGGGCGCTCCATGTTGGAGACCATCAAGAAGGGTGGAGTTAGTGGGTTGACTGGAGAGCTAGAATTTGGAGAAAATGGAGGCAATCC
CAATGTCCACTTTGAAATCCTTGGAACCAACTATGGAGAAGAGCTTGGCAGAGGTGTTCGAAAACTTGGTTGCTGGAATCCTGTCACAGG
TCTGAATGGGTCACTGACTGACAAGAAATTGGAGAATAACATGCGTGGAGTGGTTCTACGTGTAGTAACTGTTCTGGAAGAACCTTTTGT
GATGGTCTCTGAAAATGTCTTGGGTAAGCCGAAGAAATACCAGGGCTTCTCCATTGATGTTTTGGATGCCTTATCTAACTACCTGGGTTT
TAACTACGAAATTTACGTAGCACCGGATCACAAATACGGAAGCCCACAAGAAGATGGGACATGGAATGGCTTGGTAGGAGAACTTGTCTT
TAAGAGAGCCGACATAGGGATTTCTGCTTTAACCATCACTCCAGATCGTGAAAATGTGGTGGACTTTACGACACGTTACATGGACTACTC
AGTGGGGGTACTACTTCGAAGGGCTGAAAAGACAGTGGATATGTTTGCCTGTCTTGCACCATTTGATCTCTCTCTATGGGCTTGCATTGC
TGGCACAGTCCTTCTGGTGGGTCTACTGGTCTACCTCTTGAACTGGCTTAATCCCCCACGATTACAAATGGGATCAATGACGTCTACTAC
TCTCTACAACTCCATGTGGTTTGTGTATGGATCTTTTGTACAACAAGGCGGGGAAGTCCCGTACACGACTCTGGCTACCCGAATGATGAT
GGGGGCTTGGTGGCTATTTGCTTTGATTGTTATCTCATCTTACACGGCAAACCTCGCTGCTTTCCTCACTATTACACGCATTGAAAGTTC
CATCCAGTCTCTCCAGGACCTTTCCAAGCAAACAGAAATCCCTTATGGCACAGTCCTAGACTCTGCGGTATATGAGCATGTCCGCATGAA
AGGACTGAATCCTTTTGAGAGGGACAGCATGTATTCCCAAATGTGGCGGATGATCAACCGAAGCAATGGATCGGAGAACAATGTTCTGGA
GTCCCAGGCAGGCATTCAAAAGGTAAAATATGGAAATTATGCTTTCGTATGGGATGCAGCTGTATTGGAATATGTGGCTATCAATGACCC
AGATTGTTCCTTTTACACCATTGGAAATACTGTTGCTGATCGGGGATATGGAATTGCATTACAACATGGCAGTCCTTACCGAGATGTTTT
TTCACAAAGGATCCTGGAGCTTCAGCAGAATGGTGACATGGACATCCTGAAGCACAAATGGTGGCCTAAGAATGGCCAGTGTGACCTGTA
CTCGTCAGTGGACACAAAGCAGAAAGGAGGCGCCCTGGACATAAAGAGCTTTGCAGGGGTCTTTTGTATCCTGGCTGCTGGAATTGTCCT
CTCCTGCTTCATAGCCATGCTGGAGACGTGGTGGAACAAGAGGAAAGGCTCCCGGGTTCCATCAAAAGAGGATGACAAGGAAATTGACCT
GGAGCACCTCCATAGACGTGTAAATAGCTTGTGCACAGATGACGACAGCCCCCATAAACAGTTTTCCACCTCGTCAATTGATTTGACCCC
TCTGGACATTGACACTTTGCCAACACGACAAGCACTGGAGCAAATCAGTGATTTCAGGAACACTCATATTACCACAACAACCTTTATCCC
AGAGCAGATCCAGACTCTTAGCCGCACACTGTCAGCTAAAGCTGCTTCTGGTTTCACTTTTGGCAACGTGCCTGAGCACCGAACTGGCCC
TTTTAGGCACAGGGCACCTAATGGGGGCTTTTTCAGGAGTCCTATAAAAACAATGTCATCTATTCCTTATCAACCAACTCCTACCCTGGG
GCTCAATCTGGGTAATGATCCAGACCGAGGCACCTCCATATGAGCATCAAACAAATCTCTTCACTGTTTCTTTTTTAGGACTCCCTTTGC
AAGGAGCAACTGTAATATTGTGGGACTAACATGGATGTAACGTTTAAAAAAAAGATCAGGATTATTAGTAACAATTCTAGTTTTTTCCTC
CCACCTTCTCCCTCTCCTCTCTCCTCTATGATTTTCTCTCTTTCCCCCTCCCTTCCTGTACATTTTCCTCCACTTTTTTTCATTACTCAA
CTTGTTCCCCAAGAAGGTAGTGTACTAGGATCCTATTAGTCTGCTTTTCATATACTGTACATCAAGTATAGGAAATGTGCACTGAGTATA
CTAAAAGTATATGCAGGATTAATTTTACATAAAGGCCTCTTCTGTAACATTTCTCTATTTTTTGAAATACAATTGCAATAACTTCAGTCT
TTTTACATTCTTCTGCTGCATCCATACAATGCTCCACTGCTGTTGAGTGTCCTTTAACTGTGGACCAAAGGCAACCCCTGCAGTGTTTAT
AAAACAATTTTAAGACCATTCAGGCCACATAAGATGAGAATGCAATTTTGTAGGATTACAAAAAAGCCATTAATATGCCAGTCAAGACTA
CAGTTAAAACTACTCTTGCACTGCAACAGTGCATATGACCTTTATGTGATTGTACAGTATTAAAAGTTTTTTCTTATGTACAGTAAACTT
TATCATATGGCAGAAGCCTCTATTGTGTTAAATAAATTAGTATTTCATATATATACATATATATGCACCTATATAATGTGTATATATATA
AAAAGGCAGCCATTGCTATTGCAATTCATTTAATAAAGCTTTAGTTTAAACAAAAGTATTGTATACAGGAACTATGTATAGTGCAGGGGT
TCTTTTCAGTTAGAAAAGGCAGGTTGCTTTAATGTTATTCTGACTCGCATTGTTTGCCAACAGAAAATATTTTATACTTTTGTTATTAAA
GCATCCAGGGCAATTTAATATTTGTTCCTAGATGTAACTCATTTGAATAGGTTTTGCATTTGTTATTCAGCAGTGTATAAAGCTAACCTT
GATAATTTTACTTTTAATTAATTATCTAAATGAAAAATGCTATTAGCTGAACCACATCCACAACAGCACATAGAGCTCTAGAAGAGTTGA
AACATAGATCATTGAAGGTTAAAAATCCTCTTCCAAAGCAGCAAGTCAATCAATACAATAATGATATTTGGGGAGGGGTGGGAGCCCTTA
AGAACTATTGATGTGGCCTTAAATTACTGTCATTTATTATCCTAAAGAAGAAAACATAATAACCATAATGGGCTCTCAACTCAACTCCCT
TTTTTATTTAGTTCTATTTGGAGGAGTTATGTATTTTTTACATTAGTGCCAAGTATATAGAAGGATGACAGCAAAAACAGTGCCTCTTTG
TGCACAATCCTTTTAAAGTAGCATTCTTACTTGTTAGAAATGTAGAATGAACTTTGTTTGTAATCCTTAAATTAAAATGTGGTAAGTAGG
AAGCAAGAACTTATTCTGTGTTTTTACGCAGCCATACACTTACTTTAATCTAACTCATTCTGTGGCTAGGATTGATATAGGAATCAACCT
ATGTGATTTGCTTTAGGAGAAATTAAAAGGTATATTCTTAAGATATATTATATTTTGATGCTAATTCTGTTCTGGGGAGCATCTTGTATT
GTCACTGTTTTGTACTAAATCTTCAAATATTGTCTACTGTGTAAGGCAGAAAAATTTCTTATCATGCAAAAACCATTTTGTTTCCAGGGT
AACAAGTAACTAAGTGCATGCACAACTTGTTTTCCCTTGTAACATTCATGATCTCATTTACAACTCTGATTTTAAAACAAAAAAATCTTT
ACAACAAGCTATATAGGGACATACCAGATGTTGCAGTGATTTTAGCTATCAACAAACTGTTAACCATGTACAATATTTAAAATAGGCTTA
TTTTGATGTATCGCCTATTATACAAACACACAAAACATTTTTGGAGGCCTCAGTTATGAGTGACAGAGCTTTCTGTGTATAATTTGTCTA

>In-frame_ENST00000354268_ENST00000282020_TCGA-LN-A4A1_SMARCAD1_chr4_95174158_+_GRID2_chr4_94128554_length(amino acids)=1189AA_start in transcript=73_stop in transcript=3642
MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQ
YIDLSSDSEDVVSPNCSNTVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKELFPQRSDNDLLKL
IESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSIKKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQE
LREVLKEHEWMYTEALESLKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVVEDSEY
DSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALVVETNLVAFDCHWIIINEEINDV
DVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYDTVLLLANAFHKKLEDRKWHSMASLSCIRK
NSKPWQGGRSMLETIKKGGVSGLTGELEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTGLNGSLTDKKLENNMRGVVLRVVTV
LEEPFVMVSENVLGKPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQEDGTWNGLVGELVFKRADIGISALTITPDRENVVDFTT
RYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTL
ATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTEIPYGTVLDSAVYEHVRMKGLNPFERDSMYSQMWRMINRSNGS
ENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAINDPDCSFYTIGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKN
GQCDLYSSVDTKQKGGALDIKSFAGVFCILAAGIVLSCFIAMLETWWNKRKGSRVPSKEDDKEIDLEHLHRRVNSLCTDDDSPHKQFSTS
SIDLTPLDIDTLPTRQALEQISDFRNTHITTTTFIPEQIQTLSRTLSAKAASGFTFGNVPEHRTGPFRHRAPNGGFFRSPIKTMSSIPYQ

--------------------------------------------------------------
>In-frame_ENST00000457823_ENST00000282020_TCGA-DU-A7TD_SMARCAD1_chr4_95174158_+_GRID2_chr4_94547419_length(transcript)=4445nt_BP=1556nt
CTCTCAGCTGGGATCGCGCCGCGTCAACTTCCGGGCGGATGCCCGCCAGCACGGCCTCCGCCGCTCCCCTTCTTTGGCCCCTTTGTGTCC
CCGCAGTGTCGAGGCGCGGGCCCTGGCAGGTCCTTTCTCGAGGCAGGGGGCACGGTAGCACAGGGAGCTTCTCTTTGTGGGCGGGCGCGA
GGCCCGCTAGGGGGTTATACTGGGGAACGTGCCTGCGCGTGCTTGGATAGTTCATTTAAAGCCCCCATCCCTGCAAGGTGGTGCTTTCTA
CCAATATGAATCTTTTCAACCTGGACCGTTTTCGCTTTGAGAAAAGGAATAAGATTGAGGAAGCGCCCGAAGCAACCCCTCAACCTTCCC
AGCCTGGCCCTTCTTCACCAATTTCTCTTAGTGCTGAAGAGGAGAATGCTGAAGGGGAAGTTAGCAGGGCAAACACTCCTGATTCAGATA
TAACTGAAAAAACAGAAGATTCTAGTGTTCCAGAAACTCCAGATAATGAAAGAAAAGCAAGTATATCATATTTCAAAAATCAAAGAGGAA
TACAGTATATTGATTTGTCTTCTGATAGTGAAGATGTCGTTTCCCCAAATTGCTCCAATACAGTTCAAGAGAAAACATTCAACAAAGATA
CAGTGATTATAGTTTCTGAGCCATCTGAAGATGAAGAGTCCCAAGGCCTTCCTACCATGGCACGTAGAAATGATGATATTTCAGAACTGG
AAGACCTTTCGGAATTGGAAGACCTTAAAGATGCTAAACTTCAGACTTTGAAGGAACTTTTTCCACAAAGAAGTGACAATGATTTACTTA
AGTTGATTGAATCAACAAGCACTATGGATGGAGCAATTGCTGCTGCCTTGCTGATGTTTGGTGATGCAGGTGGTGGGCCCAGGAAAAGAA
AATTATCTTCTTCTTCAGAGCCATATGAGGAAGATGAATTTAATGATGATCAATCTATAAAAAAGACAAGACTGGATCATGGAGAGGAAT
CAAATGAGTCTGCAGAATCTAGCAGTAATTGGGAAAAGCAGGAAAGTATTGTACTGAAATTGCAAAAGGAATTTCCCAATTTTGATAAAC
AGGAACTTAGAGAAGTACTCAAGGAACATGAATGGATGTACACAGAAGCTTTAGAATCTCTAAAAGTGTTTGCAGAAGACCAAGATATGC
AATATGTATCACAAAGTGAGGTTCCAAATGGAAAAGAAGTTTCTTCAAGAAGTCAAAATTACCCTAAAAATGCAACTAAAACAAAACTAA
AACAGAAATTTTCAATGAAAGCACAAAATGGCTTTAACAAGAAACGTAAAAAAAATGTTTTTAATCCAAAGAGAGTTGTTGAAGACTCTG
AATATGATTCAGGTTCTGATGTCGGTAGTTCACTAGATGAGGACTATAGTAGTGGTGAAGAAGTGATGGAGGATGGCTATAAAGGTAAAA
TTCTTCACTTCCTTCAAGATGCTTCAATTGGTGAACTTACTTTGATTCCTCAGTGTTCTCAGAAAAAGGCTCAGAAGATAACAGAACTCC
GGCCCTTTAATAGTTGGGAGGCTCTGGTAAAATATGGAAATTATGCTTTCGTATGGGATGCAGCTGTATTGGAATATGTGGCTATCAATG
ACCCAGATTGTTCCTTTTACACCATTGGAAATACTGTTGCTGATCGGGGATATGGAATTGCATTACAACATGGCAGTCCTTACCGAGATG
TTTTTTCACAAAGGATCCTGGAGCTTCAGCAGAATGGTGACATGGACATCCTGAAGCACAAATGGTGGCCTAAGAATGGCCAGTGTGACC
TGTACTCGTCAGTGGACACAAAGCAGAAAGGAGGCGCCCTGGACATAAAGAGCTTTGCAGGGGTCTTTTGTATCCTGGCTGCTGGAATTG
TCCTCTCCTGCTTCATAGCCATGCTGGAGACGTGGTGGAACAAGAGGAAAGGCTCCCGGGTTCCATCAAAAGAGGATGACAAGGAAATTG
ACCTGGAGCACCTCCATAGACGTGTAAATAGCTTGTGCACAGATGACGACAGCCCCCATAAACAGTTTTCCACCTCGTCAATTGATTTGA
CCCCTCTGGACATTGACACTTTGCCAACACGACAAGCACTGGAGCAAATCAGTGATTTCAGGAACACTCATATTACCACAACAACCTTTA
TCCCAGAGCAGATCCAGACTCTTAGCCGCACACTGTCAGCTAAAGCTGCTTCTGGTTTCACTTTTGGCAACGTGCCTGAGCACCGAACTG
GCCCTTTTAGGCACAGGGCACCTAATGGGGGCTTTTTCAGGAGTCCTATAAAAACAATGTCATCTATTCCTTATCAACCAACTCCTACCC
TGGGGCTCAATCTGGGTAATGATCCAGACCGAGGCACCTCCATATGAGCATCAAACAAATCTCTTCACTGTTTCTTTTTTAGGACTCCCT
TTGCAAGGAGCAACTGTAATATTGTGGGACTAACATGGATGTAACGTTTAAAAAAAAGATCAGGATTATTAGTAACAATTCTAGTTTTTT
CCTCCCACCTTCTCCCTCTCCTCTCTCCTCTATGATTTTCTCTCTTTCCCCCTCCCTTCCTGTACATTTTCCTCCACTTTTTTTCATTAC
TCAACTTGTTCCCCAAGAAGGTAGTGTACTAGGATCCTATTAGTCTGCTTTTCATATACTGTACATCAAGTATAGGAAATGTGCACTGAG
TATACTAAAAGTATATGCAGGATTAATTTTACATAAAGGCCTCTTCTGTAACATTTCTCTATTTTTTGAAATACAATTGCAATAACTTCA
GTCTTTTTACATTCTTCTGCTGCATCCATACAATGCTCCACTGCTGTTGAGTGTCCTTTAACTGTGGACCAAAGGCAACCCCTGCAGTGT
TTATAAAACAATTTTAAGACCATTCAGGCCACATAAGATGAGAATGCAATTTTGTAGGATTACAAAAAAGCCATTAATATGCCAGTCAAG
ACTACAGTTAAAACTACTCTTGCACTGCAACAGTGCATATGACCTTTATGTGATTGTACAGTATTAAAAGTTTTTTCTTATGTACAGTAA
ACTTTATCATATGGCAGAAGCCTCTATTGTGTTAAATAAATTAGTATTTCATATATATACATATATATGCACCTATATAATGTGTATATA
TATAAAAAGGCAGCCATTGCTATTGCAATTCATTTAATAAAGCTTTAGTTTAAACAAAAGTATTGTATACAGGAACTATGTATAGTGCAG
GGGTTCTTTTCAGTTAGAAAAGGCAGGTTGCTTTAATGTTATTCTGACTCGCATTGTTTGCCAACAGAAAATATTTTATACTTTTGTTAT
TAAAGCATCCAGGGCAATTTAATATTTGTTCCTAGATGTAACTCATTTGAATAGGTTTTGCATTTGTTATTCAGCAGTGTATAAAGCTAA
CCTTGATAATTTTACTTTTAATTAATTATCTAAATGAAAAATGCTATTAGCTGAACCACATCCACAACAGCACATAGAGCTCTAGAAGAG
TTGAAACATAGATCATTGAAGGTTAAAAATCCTCTTCCAAAGCAGCAAGTCAATCAATACAATAATGATATTTGGGGAGGGGTGGGAGCC
CTTAAGAACTATTGATGTGGCCTTAAATTACTGTCATTTATTATCCTAAAGAAGAAAACATAATAACCATAATGGGCTCTCAACTCAACT
CCCTTTTTTATTTAGTTCTATTTGGAGGAGTTATGTATTTTTTACATTAGTGCCAAGTATATAGAAGGATGACAGCAAAAACAGTGCCTC
TTTGTGCACAATCCTTTTAAAGTAGCATTCTTACTTGTTAGAAATGTAGAATGAACTTTGTTTGTAATCCTTAAATTAAAATGTGGTAAG
TAGGAAGCAAGAACTTATTCTGTGTTTTTACGCAGCCATACACTTACTTTAATCTAACTCATTCTGTGGCTAGGATTGATATAGGAATCA
ACCTATGTGATTTGCTTTAGGAGAAATTAAAAGGTATATTCTTAAGATATATTATATTTTGATGCTAATTCTGTTCTGGGGAGCATCTTG
TATTGTCACTGTTTTGTACTAAATCTTCAAATATTGTCTACTGTGTAAGGCAGAAAAATTTCTTATCATGCAAAAACCATTTTGTTTCCA
GGGTAACAAGTAACTAAGTGCATGCACAACTTGTTTTCCCTTGTAACATTCATGATCTCATTTACAACTCTGATTTTAAAACAAAAAAAT
CTTTACAACAAGCTATATAGGGACATACCAGATGTTGCAGTGATTTTAGCTATCAACAAACTGTTAACCATGTACAATATTTAAAATAGG
CTTATTTTGATGTATCGCCTATTATACAAACACACAAAACATTTTTGGAGGCCTCAGTTATGAGTGACAGAGCTTTCTGTGTATAATTTG

>In-frame_ENST00000457823_ENST00000282020_TCGA-DU-A7TD_SMARCAD1_chr4_95174158_+_GRID2_chr4_94547419_length(amino acids)=703AA_start in transcript=275_stop in transcript=2386
MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQ
YIDLSSDSEDVVSPNCSNTVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKELFPQRSDNDLLKL
IESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSIKKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQE
LREVLKEHEWMYTEALESLKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVVEDSEY
DSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALVKYGNYAFVWDAAVLEYVAINDP
DCSFYTIGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQCDLYSSVDTKQKGGALDIKSFAGVFCILAAGIVL
SCFIAMLETWWNKRKGSRVPSKEDDKEIDLEHLHRRVNSLCTDDDSPHKQFSTSSIDLTPLDIDTLPTRQALEQISDFRNTHITTTTFIP

--------------------------------------------------------------
>In-frame_ENST00000354268_ENST00000282020_TCGA-DU-A7TD_SMARCAD1_chr4_95174158_+_GRID2_chr4_94547419_length(transcript)=4243nt_BP=1354nt
GGGAACGTGCCTGCGCGTGCTTGGATAGTTCATTTAAAGCCCCCATCCCTGCAAGGTGGTGCTTTCTACCAATATGAATCTTTTCAACCT
GGACCGTTTTCGCTTTGAGAAAAGGAATAAGATTGAGGAAGCGCCCGAAGCAACCCCTCAACCTTCCCAGCCTGGCCCTTCTTCACCAAT
TTCTCTTAGTGCTGAAGAGGAGAATGCTGAAGGGGAAGTTAGCAGGGCAAACACTCCTGATTCAGATATAACTGAAAAAACAGAAGATTC
TAGTGTTCCAGAAACTCCAGATAATGAAAGAAAAGCAAGTATATCATATTTCAAAAATCAAAGAGGAATACAGTATATTGATTTGTCTTC
TGATAGTGAAGATGTCGTTTCCCCAAATTGCTCCAATACAGTTCAAGAGAAAACATTCAACAAAGATACAGTGATTATAGTTTCTGAGCC
ATCTGAAGATGAAGAGTCCCAAGGCCTTCCTACCATGGCACGTAGAAATGATGATATTTCAGAACTGGAAGACCTTTCGGAATTGGAAGA
CCTTAAAGATGCTAAACTTCAGACTTTGAAGGAACTTTTTCCACAAAGAAGTGACAATGATTTACTTAAGTTGATTGAATCAACAAGCAC
TATGGATGGAGCAATTGCTGCTGCCTTGCTGATGTTTGGTGATGCAGGTGGTGGGCCCAGGAAAAGAAAATTATCTTCTTCTTCAGAGCC
ATATGAGGAAGATGAATTTAATGATGATCAATCTATAAAAAAGACAAGACTGGATCATGGAGAGGAATCAAATGAGTCTGCAGAATCTAG
CAGTAATTGGGAAAAGCAGGAAAGTATTGTACTGAAATTGCAAAAGGAATTTCCCAATTTTGATAAACAGGAACTTAGAGAAGTACTCAA
GGAACATGAATGGATGTACACAGAAGCTTTAGAATCTCTAAAAGTGTTTGCAGAAGACCAAGATATGCAATATGTATCACAAAGTGAGGT
TCCAAATGGAAAAGAAGTTTCTTCAAGAAGTCAAAATTACCCTAAAAATGCAACTAAAACAAAACTAAAACAGAAATTTTCAATGAAAGC
ACAAAATGGCTTTAACAAGAAACGTAAAAAAAATGTTTTTAATCCAAAGAGAGTTGTTGAAGACTCTGAATATGATTCAGGTTCTGATGT
CGGTAGTTCACTAGATGAGGACTATAGTAGTGGTGAAGAAGTGATGGAGGATGGCTATAAAGGTAAAATTCTTCACTTCCTTCAAGATGC
TTCAATTGGTGAACTTACTTTGATTCCTCAGTGTTCTCAGAAAAAGGCTCAGAAGATAACAGAACTCCGGCCCTTTAATAGTTGGGAGGC
TCTGGTAAAATATGGAAATTATGCTTTCGTATGGGATGCAGCTGTATTGGAATATGTGGCTATCAATGACCCAGATTGTTCCTTTTACAC
CATTGGAAATACTGTTGCTGATCGGGGATATGGAATTGCATTACAACATGGCAGTCCTTACCGAGATGTTTTTTCACAAAGGATCCTGGA
GCTTCAGCAGAATGGTGACATGGACATCCTGAAGCACAAATGGTGGCCTAAGAATGGCCAGTGTGACCTGTACTCGTCAGTGGACACAAA
GCAGAAAGGAGGCGCCCTGGACATAAAGAGCTTTGCAGGGGTCTTTTGTATCCTGGCTGCTGGAATTGTCCTCTCCTGCTTCATAGCCAT
GCTGGAGACGTGGTGGAACAAGAGGAAAGGCTCCCGGGTTCCATCAAAAGAGGATGACAAGGAAATTGACCTGGAGCACCTCCATAGACG
TGTAAATAGCTTGTGCACAGATGACGACAGCCCCCATAAACAGTTTTCCACCTCGTCAATTGATTTGACCCCTCTGGACATTGACACTTT
GCCAACACGACAAGCACTGGAGCAAATCAGTGATTTCAGGAACACTCATATTACCACAACAACCTTTATCCCAGAGCAGATCCAGACTCT
TAGCCGCACACTGTCAGCTAAAGCTGCTTCTGGTTTCACTTTTGGCAACGTGCCTGAGCACCGAACTGGCCCTTTTAGGCACAGGGCACC
TAATGGGGGCTTTTTCAGGAGTCCTATAAAAACAATGTCATCTATTCCTTATCAACCAACTCCTACCCTGGGGCTCAATCTGGGTAATGA
TCCAGACCGAGGCACCTCCATATGAGCATCAAACAAATCTCTTCACTGTTTCTTTTTTAGGACTCCCTTTGCAAGGAGCAACTGTAATAT
TGTGGGACTAACATGGATGTAACGTTTAAAAAAAAGATCAGGATTATTAGTAACAATTCTAGTTTTTTCCTCCCACCTTCTCCCTCTCCT
CTCTCCTCTATGATTTTCTCTCTTTCCCCCTCCCTTCCTGTACATTTTCCTCCACTTTTTTTCATTACTCAACTTGTTCCCCAAGAAGGT
AGTGTACTAGGATCCTATTAGTCTGCTTTTCATATACTGTACATCAAGTATAGGAAATGTGCACTGAGTATACTAAAAGTATATGCAGGA
TTAATTTTACATAAAGGCCTCTTCTGTAACATTTCTCTATTTTTTGAAATACAATTGCAATAACTTCAGTCTTTTTACATTCTTCTGCTG
CATCCATACAATGCTCCACTGCTGTTGAGTGTCCTTTAACTGTGGACCAAAGGCAACCCCTGCAGTGTTTATAAAACAATTTTAAGACCA
TTCAGGCCACATAAGATGAGAATGCAATTTTGTAGGATTACAAAAAAGCCATTAATATGCCAGTCAAGACTACAGTTAAAACTACTCTTG
CACTGCAACAGTGCATATGACCTTTATGTGATTGTACAGTATTAAAAGTTTTTTCTTATGTACAGTAAACTTTATCATATGGCAGAAGCC
TCTATTGTGTTAAATAAATTAGTATTTCATATATATACATATATATGCACCTATATAATGTGTATATATATAAAAAGGCAGCCATTGCTA
TTGCAATTCATTTAATAAAGCTTTAGTTTAAACAAAAGTATTGTATACAGGAACTATGTATAGTGCAGGGGTTCTTTTCAGTTAGAAAAG
GCAGGTTGCTTTAATGTTATTCTGACTCGCATTGTTTGCCAACAGAAAATATTTTATACTTTTGTTATTAAAGCATCCAGGGCAATTTAA
TATTTGTTCCTAGATGTAACTCATTTGAATAGGTTTTGCATTTGTTATTCAGCAGTGTATAAAGCTAACCTTGATAATTTTACTTTTAAT
TAATTATCTAAATGAAAAATGCTATTAGCTGAACCACATCCACAACAGCACATAGAGCTCTAGAAGAGTTGAAACATAGATCATTGAAGG
TTAAAAATCCTCTTCCAAAGCAGCAAGTCAATCAATACAATAATGATATTTGGGGAGGGGTGGGAGCCCTTAAGAACTATTGATGTGGCC
TTAAATTACTGTCATTTATTATCCTAAAGAAGAAAACATAATAACCATAATGGGCTCTCAACTCAACTCCCTTTTTTATTTAGTTCTATT
TGGAGGAGTTATGTATTTTTTACATTAGTGCCAAGTATATAGAAGGATGACAGCAAAAACAGTGCCTCTTTGTGCACAATCCTTTTAAAG
TAGCATTCTTACTTGTTAGAAATGTAGAATGAACTTTGTTTGTAATCCTTAAATTAAAATGTGGTAAGTAGGAAGCAAGAACTTATTCTG
TGTTTTTACGCAGCCATACACTTACTTTAATCTAACTCATTCTGTGGCTAGGATTGATATAGGAATCAACCTATGTGATTTGCTTTAGGA
GAAATTAAAAGGTATATTCTTAAGATATATTATATTTTGATGCTAATTCTGTTCTGGGGAGCATCTTGTATTGTCACTGTTTTGTACTAA
ATCTTCAAATATTGTCTACTGTGTAAGGCAGAAAAATTTCTTATCATGCAAAAACCATTTTGTTTCCAGGGTAACAAGTAACTAAGTGCA
TGCACAACTTGTTTTCCCTTGTAACATTCATGATCTCATTTACAACTCTGATTTTAAAACAAAAAAATCTTTACAACAAGCTATATAGGG
ACATACCAGATGTTGCAGTGATTTTAGCTATCAACAAACTGTTAACCATGTACAATATTTAAAATAGGCTTATTTTGATGTATCGCCTAT
TATACAAACACACAAAACATTTTTGGAGGCCTCAGTTATGAGTGACAGAGCTTTCTGTGTATAATTTGTCTAAATAATTTGTCTAATAAA

>In-frame_ENST00000354268_ENST00000282020_TCGA-DU-A7TD_SMARCAD1_chr4_95174158_+_GRID2_chr4_94547419_length(amino acids)=703AA_start in transcript=73_stop in transcript=2184
MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQ
YIDLSSDSEDVVSPNCSNTVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKELFPQRSDNDLLKL
IESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSIKKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQE
LREVLKEHEWMYTEALESLKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVVEDSEY
DSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALVKYGNYAFVWDAAVLEYVAINDP
DCSFYTIGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQCDLYSSVDTKQKGGALDIKSFAGVFCILAAGIVL
SCFIAMLETWWNKRKGSRVPSKEDDKEIDLEHLHRRVNSLCTDDDSPHKQFSTSSIDLTPLDIDTLPTRQALEQISDFRNTHITTTTFIP

--------------------------------------------------------------
>In-frame_ENST00000457823_ENST00000282020_TCGA-LN-A4A1_SMARCAD1_chr4_95174158_+_GRID2_chr4_94128555_length(transcript)=5903nt_BP=1556nt
CTCTCAGCTGGGATCGCGCCGCGTCAACTTCCGGGCGGATGCCCGCCAGCACGGCCTCCGCCGCTCCCCTTCTTTGGCCCCTTTGTGTCC
CCGCAGTGTCGAGGCGCGGGCCCTGGCAGGTCCTTTCTCGAGGCAGGGGGCACGGTAGCACAGGGAGCTTCTCTTTGTGGGCGGGCGCGA
GGCCCGCTAGGGGGTTATACTGGGGAACGTGCCTGCGCGTGCTTGGATAGTTCATTTAAAGCCCCCATCCCTGCAAGGTGGTGCTTTCTA
CCAATATGAATCTTTTCAACCTGGACCGTTTTCGCTTTGAGAAAAGGAATAAGATTGAGGAAGCGCCCGAAGCAACCCCTCAACCTTCCC
AGCCTGGCCCTTCTTCACCAATTTCTCTTAGTGCTGAAGAGGAGAATGCTGAAGGGGAAGTTAGCAGGGCAAACACTCCTGATTCAGATA
TAACTGAAAAAACAGAAGATTCTAGTGTTCCAGAAACTCCAGATAATGAAAGAAAAGCAAGTATATCATATTTCAAAAATCAAAGAGGAA
TACAGTATATTGATTTGTCTTCTGATAGTGAAGATGTCGTTTCCCCAAATTGCTCCAATACAGTTCAAGAGAAAACATTCAACAAAGATA
CAGTGATTATAGTTTCTGAGCCATCTGAAGATGAAGAGTCCCAAGGCCTTCCTACCATGGCACGTAGAAATGATGATATTTCAGAACTGG
AAGACCTTTCGGAATTGGAAGACCTTAAAGATGCTAAACTTCAGACTTTGAAGGAACTTTTTCCACAAAGAAGTGACAATGATTTACTTA
AGTTGATTGAATCAACAAGCACTATGGATGGAGCAATTGCTGCTGCCTTGCTGATGTTTGGTGATGCAGGTGGTGGGCCCAGGAAAAGAA
AATTATCTTCTTCTTCAGAGCCATATGAGGAAGATGAATTTAATGATGATCAATCTATAAAAAAGACAAGACTGGATCATGGAGAGGAAT
CAAATGAGTCTGCAGAATCTAGCAGTAATTGGGAAAAGCAGGAAAGTATTGTACTGAAATTGCAAAAGGAATTTCCCAATTTTGATAAAC
AGGAACTTAGAGAAGTACTCAAGGAACATGAATGGATGTACACAGAAGCTTTAGAATCTCTAAAAGTGTTTGCAGAAGACCAAGATATGC
AATATGTATCACAAAGTGAGGTTCCAAATGGAAAAGAAGTTTCTTCAAGAAGTCAAAATTACCCTAAAAATGCAACTAAAACAAAACTAA
AACAGAAATTTTCAATGAAAGCACAAAATGGCTTTAACAAGAAACGTAAAAAAAATGTTTTTAATCCAAAGAGAGTTGTTGAAGACTCTG
AATATGATTCAGGTTCTGATGTCGGTAGTTCACTAGATGAGGACTATAGTAGTGGTGAAGAAGTGATGGAGGATGGCTATAAAGGTAAAA
TTCTTCACTTCCTTCAAGATGCTTCAATTGGTGAACTTACTTTGATTCCTCAGTGTTCTCAGAAAAAGGCTCAGAAGATAACAGAACTCC
GGCCCTTTAATAGTTGGGAGGCTCTGGTTGTGGAGACTAATTTGGTTGCTTTTGACTGTCACTGGATCATTATAAATGAGGAAATAAACG
ATGTGGACGTACAGGAACTTGTAAGAAGGTCAATTGGAAGGTTAACGATTATTCGGCAGACATTTCCAGTTCCCCAGAACATAAGTCAGC
GGTGTTTCCGTGGCAACCATCGAATATCTTCAACATTGTGTGATCCAAAGGATCCATTTGCTCAGAATATGGAGATTTCCAACCTTTACA
TATATGACACGGTGCTTCTGCTTGCTAATGCTTTTCATAAGAAGCTGGAGGACCGAAAGTGGCACAGCATGGCAAGTCTGTCATGTATCA
GAAAGAACTCAAAGCCCTGGCAGGGTGGGCGCTCCATGTTGGAGACCATCAAGAAGGGTGGAGTTAGTGGGTTGACTGGAGAGCTAGAAT
TTGGAGAAAATGGAGGCAATCCCAATGTCCACTTTGAAATCCTTGGAACCAACTATGGAGAAGAGCTTGGCAGAGGTGTTCGAAAACTTG
GTTGCTGGAATCCTGTCACAGGTCTGAATGGGTCACTGACTGACAAGAAATTGGAGAATAACATGCGTGGAGTGGTTCTACGTGTAGTAA
CTGTTCTGGAAGAACCTTTTGTGATGGTCTCTGAAAATGTCTTGGGTAAGCCGAAGAAATACCAGGGCTTCTCCATTGATGTTTTGGATG
CCTTATCTAACTACCTGGGTTTTAACTACGAAATTTACGTAGCACCGGATCACAAATACGGAAGCCCACAAGAAGATGGGACATGGAATG
GCTTGGTAGGAGAACTTGTCTTTAAGAGAGCCGACATAGGGATTTCTGCTTTAACCATCACTCCAGATCGTGAAAATGTGGTGGACTTTA
CGACACGTTACATGGACTACTCAGTGGGGGTACTACTTCGAAGGGCTGAAAAGACAGTGGATATGTTTGCCTGTCTTGCACCATTTGATC
TCTCTCTATGGGCTTGCATTGCTGGCACAGTCCTTCTGGTGGGTCTACTGGTCTACCTCTTGAACTGGCTTAATCCCCCACGATTACAAA
TGGGATCAATGACGTCTACTACTCTCTACAACTCCATGTGGTTTGTGTATGGATCTTTTGTACAACAAGGCGGGGAAGTCCCGTACACGA
CTCTGGCTACCCGAATGATGATGGGGGCTTGGTGGCTATTTGCTTTGATTGTTATCTCATCTTACACGGCAAACCTCGCTGCTTTCCTCA
CTATTACACGCATTGAAAGTTCCATCCAGTCTCTCCAGGACCTTTCCAAGCAAACAGAAATCCCTTATGGCACAGTCCTAGACTCTGCGG
TATATGAGCATGTCCGCATGAAAGGACTGAATCCTTTTGAGAGGGACAGCATGTATTCCCAAATGTGGCGGATGATCAACCGAAGCAATG
GATCGGAGAACAATGTTCTGGAGTCCCAGGCAGGCATTCAAAAGGTAAAATATGGAAATTATGCTTTCGTATGGGATGCAGCTGTATTGG
AATATGTGGCTATCAATGACCCAGATTGTTCCTTTTACACCATTGGAAATACTGTTGCTGATCGGGGATATGGAATTGCATTACAACATG
GCAGTCCTTACCGAGATGTTTTTTCACAAAGGATCCTGGAGCTTCAGCAGAATGGTGACATGGACATCCTGAAGCACAAATGGTGGCCTA
AGAATGGCCAGTGTGACCTGTACTCGTCAGTGGACACAAAGCAGAAAGGAGGCGCCCTGGACATAAAGAGCTTTGCAGGGGTCTTTTGTA
TCCTGGCTGCTGGAATTGTCCTCTCCTGCTTCATAGCCATGCTGGAGACGTGGTGGAACAAGAGGAAAGGCTCCCGGGTTCCATCAAAAG
AGGATGACAAGGAAATTGACCTGGAGCACCTCCATAGACGTGTAAATAGCTTGTGCACAGATGACGACAGCCCCCATAAACAGTTTTCCA
CCTCGTCAATTGATTTGACCCCTCTGGACATTGACACTTTGCCAACACGACAAGCACTGGAGCAAATCAGTGATTTCAGGAACACTCATA
TTACCACAACAACCTTTATCCCAGAGCAGATCCAGACTCTTAGCCGCACACTGTCAGCTAAAGCTGCTTCTGGTTTCACTTTTGGCAACG
TGCCTGAGCACCGAACTGGCCCTTTTAGGCACAGGGCACCTAATGGGGGCTTTTTCAGGAGTCCTATAAAAACAATGTCATCTATTCCTT
ATCAACCAACTCCTACCCTGGGGCTCAATCTGGGTAATGATCCAGACCGAGGCACCTCCATATGAGCATCAAACAAATCTCTTCACTGTT
TCTTTTTTAGGACTCCCTTTGCAAGGAGCAACTGTAATATTGTGGGACTAACATGGATGTAACGTTTAAAAAAAAGATCAGGATTATTAG
TAACAATTCTAGTTTTTTCCTCCCACCTTCTCCCTCTCCTCTCTCCTCTATGATTTTCTCTCTTTCCCCCTCCCTTCCTGTACATTTTCC
TCCACTTTTTTTCATTACTCAACTTGTTCCCCAAGAAGGTAGTGTACTAGGATCCTATTAGTCTGCTTTTCATATACTGTACATCAAGTA
TAGGAAATGTGCACTGAGTATACTAAAAGTATATGCAGGATTAATTTTACATAAAGGCCTCTTCTGTAACATTTCTCTATTTTTTGAAAT
ACAATTGCAATAACTTCAGTCTTTTTACATTCTTCTGCTGCATCCATACAATGCTCCACTGCTGTTGAGTGTCCTTTAACTGTGGACCAA
AGGCAACCCCTGCAGTGTTTATAAAACAATTTTAAGACCATTCAGGCCACATAAGATGAGAATGCAATTTTGTAGGATTACAAAAAAGCC
ATTAATATGCCAGTCAAGACTACAGTTAAAACTACTCTTGCACTGCAACAGTGCATATGACCTTTATGTGATTGTACAGTATTAAAAGTT
TTTTCTTATGTACAGTAAACTTTATCATATGGCAGAAGCCTCTATTGTGTTAAATAAATTAGTATTTCATATATATACATATATATGCAC
CTATATAATGTGTATATATATAAAAAGGCAGCCATTGCTATTGCAATTCATTTAATAAAGCTTTAGTTTAAACAAAAGTATTGTATACAG
GAACTATGTATAGTGCAGGGGTTCTTTTCAGTTAGAAAAGGCAGGTTGCTTTAATGTTATTCTGACTCGCATTGTTTGCCAACAGAAAAT
ATTTTATACTTTTGTTATTAAAGCATCCAGGGCAATTTAATATTTGTTCCTAGATGTAACTCATTTGAATAGGTTTTGCATTTGTTATTC
AGCAGTGTATAAAGCTAACCTTGATAATTTTACTTTTAATTAATTATCTAAATGAAAAATGCTATTAGCTGAACCACATCCACAACAGCA
CATAGAGCTCTAGAAGAGTTGAAACATAGATCATTGAAGGTTAAAAATCCTCTTCCAAAGCAGCAAGTCAATCAATACAATAATGATATT
TGGGGAGGGGTGGGAGCCCTTAAGAACTATTGATGTGGCCTTAAATTACTGTCATTTATTATCCTAAAGAAGAAAACATAATAACCATAA
TGGGCTCTCAACTCAACTCCCTTTTTTATTTAGTTCTATTTGGAGGAGTTATGTATTTTTTACATTAGTGCCAAGTATATAGAAGGATGA
CAGCAAAAACAGTGCCTCTTTGTGCACAATCCTTTTAAAGTAGCATTCTTACTTGTTAGAAATGTAGAATGAACTTTGTTTGTAATCCTT
AAATTAAAATGTGGTAAGTAGGAAGCAAGAACTTATTCTGTGTTTTTACGCAGCCATACACTTACTTTAATCTAACTCATTCTGTGGCTA
GGATTGATATAGGAATCAACCTATGTGATTTGCTTTAGGAGAAATTAAAAGGTATATTCTTAAGATATATTATATTTTGATGCTAATTCT
GTTCTGGGGAGCATCTTGTATTGTCACTGTTTTGTACTAAATCTTCAAATATTGTCTACTGTGTAAGGCAGAAAAATTTCTTATCATGCA
AAAACCATTTTGTTTCCAGGGTAACAAGTAACTAAGTGCATGCACAACTTGTTTTCCCTTGTAACATTCATGATCTCATTTACAACTCTG
ATTTTAAAACAAAAAAATCTTTACAACAAGCTATATAGGGACATACCAGATGTTGCAGTGATTTTAGCTATCAACAAACTGTTAACCATG
TACAATATTTAAAATAGGCTTATTTTGATGTATCGCCTATTATACAAACACACAAAACATTTTTGGAGGCCTCAGTTATGAGTGACAGAG

>In-frame_ENST00000457823_ENST00000282020_TCGA-LN-A4A1_SMARCAD1_chr4_95174158_+_GRID2_chr4_94128555_length(amino acids)=1189AA_start in transcript=275_stop in transcript=3844
MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQ
YIDLSSDSEDVVSPNCSNTVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKELFPQRSDNDLLKL
IESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSIKKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQE
LREVLKEHEWMYTEALESLKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVVEDSEY
DSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALVVETNLVAFDCHWIIINEEINDV
DVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYDTVLLLANAFHKKLEDRKWHSMASLSCIRK
NSKPWQGGRSMLETIKKGGVSGLTGELEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTGLNGSLTDKKLENNMRGVVLRVVTV
LEEPFVMVSENVLGKPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQEDGTWNGLVGELVFKRADIGISALTITPDRENVVDFTT
RYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTL
ATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTEIPYGTVLDSAVYEHVRMKGLNPFERDSMYSQMWRMINRSNGS
ENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAINDPDCSFYTIGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKN
GQCDLYSSVDTKQKGGALDIKSFAGVFCILAAGIVLSCFIAMLETWWNKRKGSRVPSKEDDKEIDLEHLHRRVNSLCTDDDSPHKQFSTS
SIDLTPLDIDTLPTRQALEQISDFRNTHITTTTFIPEQIQTLSRTLSAKAASGFTFGNVPEHRTGPFRHRAPNGGFFRSPIKTMSSIPYQ

--------------------------------------------------------------
>In-frame_ENST00000354268_ENST00000282020_TCGA-LN-A4A1_SMARCAD1_chr4_95174158_+_GRID2_chr4_94128555_length(transcript)=5701nt_BP=1354nt
GGGAACGTGCCTGCGCGTGCTTGGATAGTTCATTTAAAGCCCCCATCCCTGCAAGGTGGTGCTTTCTACCAATATGAATCTTTTCAACCT
GGACCGTTTTCGCTTTGAGAAAAGGAATAAGATTGAGGAAGCGCCCGAAGCAACCCCTCAACCTTCCCAGCCTGGCCCTTCTTCACCAAT
TTCTCTTAGTGCTGAAGAGGAGAATGCTGAAGGGGAAGTTAGCAGGGCAAACACTCCTGATTCAGATATAACTGAAAAAACAGAAGATTC
TAGTGTTCCAGAAACTCCAGATAATGAAAGAAAAGCAAGTATATCATATTTCAAAAATCAAAGAGGAATACAGTATATTGATTTGTCTTC
TGATAGTGAAGATGTCGTTTCCCCAAATTGCTCCAATACAGTTCAAGAGAAAACATTCAACAAAGATACAGTGATTATAGTTTCTGAGCC
ATCTGAAGATGAAGAGTCCCAAGGCCTTCCTACCATGGCACGTAGAAATGATGATATTTCAGAACTGGAAGACCTTTCGGAATTGGAAGA
CCTTAAAGATGCTAAACTTCAGACTTTGAAGGAACTTTTTCCACAAAGAAGTGACAATGATTTACTTAAGTTGATTGAATCAACAAGCAC
TATGGATGGAGCAATTGCTGCTGCCTTGCTGATGTTTGGTGATGCAGGTGGTGGGCCCAGGAAAAGAAAATTATCTTCTTCTTCAGAGCC
ATATGAGGAAGATGAATTTAATGATGATCAATCTATAAAAAAGACAAGACTGGATCATGGAGAGGAATCAAATGAGTCTGCAGAATCTAG
CAGTAATTGGGAAAAGCAGGAAAGTATTGTACTGAAATTGCAAAAGGAATTTCCCAATTTTGATAAACAGGAACTTAGAGAAGTACTCAA
GGAACATGAATGGATGTACACAGAAGCTTTAGAATCTCTAAAAGTGTTTGCAGAAGACCAAGATATGCAATATGTATCACAAAGTGAGGT
TCCAAATGGAAAAGAAGTTTCTTCAAGAAGTCAAAATTACCCTAAAAATGCAACTAAAACAAAACTAAAACAGAAATTTTCAATGAAAGC
ACAAAATGGCTTTAACAAGAAACGTAAAAAAAATGTTTTTAATCCAAAGAGAGTTGTTGAAGACTCTGAATATGATTCAGGTTCTGATGT
CGGTAGTTCACTAGATGAGGACTATAGTAGTGGTGAAGAAGTGATGGAGGATGGCTATAAAGGTAAAATTCTTCACTTCCTTCAAGATGC
TTCAATTGGTGAACTTACTTTGATTCCTCAGTGTTCTCAGAAAAAGGCTCAGAAGATAACAGAACTCCGGCCCTTTAATAGTTGGGAGGC
TCTGGTTGTGGAGACTAATTTGGTTGCTTTTGACTGTCACTGGATCATTATAAATGAGGAAATAAACGATGTGGACGTACAGGAACTTGT
AAGAAGGTCAATTGGAAGGTTAACGATTATTCGGCAGACATTTCCAGTTCCCCAGAACATAAGTCAGCGGTGTTTCCGTGGCAACCATCG
AATATCTTCAACATTGTGTGATCCAAAGGATCCATTTGCTCAGAATATGGAGATTTCCAACCTTTACATATATGACACGGTGCTTCTGCT
TGCTAATGCTTTTCATAAGAAGCTGGAGGACCGAAAGTGGCACAGCATGGCAAGTCTGTCATGTATCAGAAAGAACTCAAAGCCCTGGCA
GGGTGGGCGCTCCATGTTGGAGACCATCAAGAAGGGTGGAGTTAGTGGGTTGACTGGAGAGCTAGAATTTGGAGAAAATGGAGGCAATCC
CAATGTCCACTTTGAAATCCTTGGAACCAACTATGGAGAAGAGCTTGGCAGAGGTGTTCGAAAACTTGGTTGCTGGAATCCTGTCACAGG
TCTGAATGGGTCACTGACTGACAAGAAATTGGAGAATAACATGCGTGGAGTGGTTCTACGTGTAGTAACTGTTCTGGAAGAACCTTTTGT
GATGGTCTCTGAAAATGTCTTGGGTAAGCCGAAGAAATACCAGGGCTTCTCCATTGATGTTTTGGATGCCTTATCTAACTACCTGGGTTT
TAACTACGAAATTTACGTAGCACCGGATCACAAATACGGAAGCCCACAAGAAGATGGGACATGGAATGGCTTGGTAGGAGAACTTGTCTT
TAAGAGAGCCGACATAGGGATTTCTGCTTTAACCATCACTCCAGATCGTGAAAATGTGGTGGACTTTACGACACGTTACATGGACTACTC
AGTGGGGGTACTACTTCGAAGGGCTGAAAAGACAGTGGATATGTTTGCCTGTCTTGCACCATTTGATCTCTCTCTATGGGCTTGCATTGC
TGGCACAGTCCTTCTGGTGGGTCTACTGGTCTACCTCTTGAACTGGCTTAATCCCCCACGATTACAAATGGGATCAATGACGTCTACTAC
TCTCTACAACTCCATGTGGTTTGTGTATGGATCTTTTGTACAACAAGGCGGGGAAGTCCCGTACACGACTCTGGCTACCCGAATGATGAT
GGGGGCTTGGTGGCTATTTGCTTTGATTGTTATCTCATCTTACACGGCAAACCTCGCTGCTTTCCTCACTATTACACGCATTGAAAGTTC
CATCCAGTCTCTCCAGGACCTTTCCAAGCAAACAGAAATCCCTTATGGCACAGTCCTAGACTCTGCGGTATATGAGCATGTCCGCATGAA
AGGACTGAATCCTTTTGAGAGGGACAGCATGTATTCCCAAATGTGGCGGATGATCAACCGAAGCAATGGATCGGAGAACAATGTTCTGGA
GTCCCAGGCAGGCATTCAAAAGGTAAAATATGGAAATTATGCTTTCGTATGGGATGCAGCTGTATTGGAATATGTGGCTATCAATGACCC
AGATTGTTCCTTTTACACCATTGGAAATACTGTTGCTGATCGGGGATATGGAATTGCATTACAACATGGCAGTCCTTACCGAGATGTTTT
TTCACAAAGGATCCTGGAGCTTCAGCAGAATGGTGACATGGACATCCTGAAGCACAAATGGTGGCCTAAGAATGGCCAGTGTGACCTGTA
CTCGTCAGTGGACACAAAGCAGAAAGGAGGCGCCCTGGACATAAAGAGCTTTGCAGGGGTCTTTTGTATCCTGGCTGCTGGAATTGTCCT
CTCCTGCTTCATAGCCATGCTGGAGACGTGGTGGAACAAGAGGAAAGGCTCCCGGGTTCCATCAAAAGAGGATGACAAGGAAATTGACCT
GGAGCACCTCCATAGACGTGTAAATAGCTTGTGCACAGATGACGACAGCCCCCATAAACAGTTTTCCACCTCGTCAATTGATTTGACCCC
TCTGGACATTGACACTTTGCCAACACGACAAGCACTGGAGCAAATCAGTGATTTCAGGAACACTCATATTACCACAACAACCTTTATCCC
AGAGCAGATCCAGACTCTTAGCCGCACACTGTCAGCTAAAGCTGCTTCTGGTTTCACTTTTGGCAACGTGCCTGAGCACCGAACTGGCCC
TTTTAGGCACAGGGCACCTAATGGGGGCTTTTTCAGGAGTCCTATAAAAACAATGTCATCTATTCCTTATCAACCAACTCCTACCCTGGG
GCTCAATCTGGGTAATGATCCAGACCGAGGCACCTCCATATGAGCATCAAACAAATCTCTTCACTGTTTCTTTTTTAGGACTCCCTTTGC
AAGGAGCAACTGTAATATTGTGGGACTAACATGGATGTAACGTTTAAAAAAAAGATCAGGATTATTAGTAACAATTCTAGTTTTTTCCTC
CCACCTTCTCCCTCTCCTCTCTCCTCTATGATTTTCTCTCTTTCCCCCTCCCTTCCTGTACATTTTCCTCCACTTTTTTTCATTACTCAA
CTTGTTCCCCAAGAAGGTAGTGTACTAGGATCCTATTAGTCTGCTTTTCATATACTGTACATCAAGTATAGGAAATGTGCACTGAGTATA
CTAAAAGTATATGCAGGATTAATTTTACATAAAGGCCTCTTCTGTAACATTTCTCTATTTTTTGAAATACAATTGCAATAACTTCAGTCT
TTTTACATTCTTCTGCTGCATCCATACAATGCTCCACTGCTGTTGAGTGTCCTTTAACTGTGGACCAAAGGCAACCCCTGCAGTGTTTAT
AAAACAATTTTAAGACCATTCAGGCCACATAAGATGAGAATGCAATTTTGTAGGATTACAAAAAAGCCATTAATATGCCAGTCAAGACTA
CAGTTAAAACTACTCTTGCACTGCAACAGTGCATATGACCTTTATGTGATTGTACAGTATTAAAAGTTTTTTCTTATGTACAGTAAACTT
TATCATATGGCAGAAGCCTCTATTGTGTTAAATAAATTAGTATTTCATATATATACATATATATGCACCTATATAATGTGTATATATATA
AAAAGGCAGCCATTGCTATTGCAATTCATTTAATAAAGCTTTAGTTTAAACAAAAGTATTGTATACAGGAACTATGTATAGTGCAGGGGT
TCTTTTCAGTTAGAAAAGGCAGGTTGCTTTAATGTTATTCTGACTCGCATTGTTTGCCAACAGAAAATATTTTATACTTTTGTTATTAAA
GCATCCAGGGCAATTTAATATTTGTTCCTAGATGTAACTCATTTGAATAGGTTTTGCATTTGTTATTCAGCAGTGTATAAAGCTAACCTT
GATAATTTTACTTTTAATTAATTATCTAAATGAAAAATGCTATTAGCTGAACCACATCCACAACAGCACATAGAGCTCTAGAAGAGTTGA
AACATAGATCATTGAAGGTTAAAAATCCTCTTCCAAAGCAGCAAGTCAATCAATACAATAATGATATTTGGGGAGGGGTGGGAGCCCTTA
AGAACTATTGATGTGGCCTTAAATTACTGTCATTTATTATCCTAAAGAAGAAAACATAATAACCATAATGGGCTCTCAACTCAACTCCCT
TTTTTATTTAGTTCTATTTGGAGGAGTTATGTATTTTTTACATTAGTGCCAAGTATATAGAAGGATGACAGCAAAAACAGTGCCTCTTTG
TGCACAATCCTTTTAAAGTAGCATTCTTACTTGTTAGAAATGTAGAATGAACTTTGTTTGTAATCCTTAAATTAAAATGTGGTAAGTAGG
AAGCAAGAACTTATTCTGTGTTTTTACGCAGCCATACACTTACTTTAATCTAACTCATTCTGTGGCTAGGATTGATATAGGAATCAACCT
ATGTGATTTGCTTTAGGAGAAATTAAAAGGTATATTCTTAAGATATATTATATTTTGATGCTAATTCTGTTCTGGGGAGCATCTTGTATT
GTCACTGTTTTGTACTAAATCTTCAAATATTGTCTACTGTGTAAGGCAGAAAAATTTCTTATCATGCAAAAACCATTTTGTTTCCAGGGT
AACAAGTAACTAAGTGCATGCACAACTTGTTTTCCCTTGTAACATTCATGATCTCATTTACAACTCTGATTTTAAAACAAAAAAATCTTT
ACAACAAGCTATATAGGGACATACCAGATGTTGCAGTGATTTTAGCTATCAACAAACTGTTAACCATGTACAATATTTAAAATAGGCTTA
TTTTGATGTATCGCCTATTATACAAACACACAAAACATTTTTGGAGGCCTCAGTTATGAGTGACAGAGCTTTCTGTGTATAATTTGTCTA

>In-frame_ENST00000354268_ENST00000282020_TCGA-LN-A4A1_SMARCAD1_chr4_95174158_+_GRID2_chr4_94128555_length(amino acids)=1189AA_start in transcript=73_stop in transcript=3642
MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQ
YIDLSSDSEDVVSPNCSNTVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKELFPQRSDNDLLKL
IESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSIKKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQE
LREVLKEHEWMYTEALESLKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVVEDSEY
DSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALVVETNLVAFDCHWIIINEEINDV
DVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYDTVLLLANAFHKKLEDRKWHSMASLSCIRK
NSKPWQGGRSMLETIKKGGVSGLTGELEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTGLNGSLTDKKLENNMRGVVLRVVTV
LEEPFVMVSENVLGKPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQEDGTWNGLVGELVFKRADIGISALTITPDRENVVDFTT
RYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTL
ATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTEIPYGTVLDSAVYEHVRMKGLNPFERDSMYSQMWRMINRSNGS
ENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAINDPDCSFYTIGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKN
GQCDLYSSVDTKQKGGALDIKSFAGVFCILAAGIVLSCFIAMLETWWNKRKGSRVPSKEDDKEIDLEHLHRRVNSLCTDDDSPHKQFSTS
SIDLTPLDIDTLPTRQALEQISDFRNTHITTTTFIPEQIQTLSRTLSAKAASGFTFGNVPEHRTGPFRHRAPNGGFFRSPIKTMSSIPYQ

--------------------------------------------------------------
>In-frame_ENST00000457823_ENST00000282020_TCGA-DU-A7TD_SMARCAD1_chr4_95174158_+_GRID2_chr4_94547420_length(transcript)=4445nt_BP=1556nt
CTCTCAGCTGGGATCGCGCCGCGTCAACTTCCGGGCGGATGCCCGCCAGCACGGCCTCCGCCGCTCCCCTTCTTTGGCCCCTTTGTGTCC
CCGCAGTGTCGAGGCGCGGGCCCTGGCAGGTCCTTTCTCGAGGCAGGGGGCACGGTAGCACAGGGAGCTTCTCTTTGTGGGCGGGCGCGA
GGCCCGCTAGGGGGTTATACTGGGGAACGTGCCTGCGCGTGCTTGGATAGTTCATTTAAAGCCCCCATCCCTGCAAGGTGGTGCTTTCTA
CCAATATGAATCTTTTCAACCTGGACCGTTTTCGCTTTGAGAAAAGGAATAAGATTGAGGAAGCGCCCGAAGCAACCCCTCAACCTTCCC
AGCCTGGCCCTTCTTCACCAATTTCTCTTAGTGCTGAAGAGGAGAATGCTGAAGGGGAAGTTAGCAGGGCAAACACTCCTGATTCAGATA
TAACTGAAAAAACAGAAGATTCTAGTGTTCCAGAAACTCCAGATAATGAAAGAAAAGCAAGTATATCATATTTCAAAAATCAAAGAGGAA
TACAGTATATTGATTTGTCTTCTGATAGTGAAGATGTCGTTTCCCCAAATTGCTCCAATACAGTTCAAGAGAAAACATTCAACAAAGATA
CAGTGATTATAGTTTCTGAGCCATCTGAAGATGAAGAGTCCCAAGGCCTTCCTACCATGGCACGTAGAAATGATGATATTTCAGAACTGG
AAGACCTTTCGGAATTGGAAGACCTTAAAGATGCTAAACTTCAGACTTTGAAGGAACTTTTTCCACAAAGAAGTGACAATGATTTACTTA
AGTTGATTGAATCAACAAGCACTATGGATGGAGCAATTGCTGCTGCCTTGCTGATGTTTGGTGATGCAGGTGGTGGGCCCAGGAAAAGAA
AATTATCTTCTTCTTCAGAGCCATATGAGGAAGATGAATTTAATGATGATCAATCTATAAAAAAGACAAGACTGGATCATGGAGAGGAAT
CAAATGAGTCTGCAGAATCTAGCAGTAATTGGGAAAAGCAGGAAAGTATTGTACTGAAATTGCAAAAGGAATTTCCCAATTTTGATAAAC
AGGAACTTAGAGAAGTACTCAAGGAACATGAATGGATGTACACAGAAGCTTTAGAATCTCTAAAAGTGTTTGCAGAAGACCAAGATATGC
AATATGTATCACAAAGTGAGGTTCCAAATGGAAAAGAAGTTTCTTCAAGAAGTCAAAATTACCCTAAAAATGCAACTAAAACAAAACTAA
AACAGAAATTTTCAATGAAAGCACAAAATGGCTTTAACAAGAAACGTAAAAAAAATGTTTTTAATCCAAAGAGAGTTGTTGAAGACTCTG
AATATGATTCAGGTTCTGATGTCGGTAGTTCACTAGATGAGGACTATAGTAGTGGTGAAGAAGTGATGGAGGATGGCTATAAAGGTAAAA
TTCTTCACTTCCTTCAAGATGCTTCAATTGGTGAACTTACTTTGATTCCTCAGTGTTCTCAGAAAAAGGCTCAGAAGATAACAGAACTCC
GGCCCTTTAATAGTTGGGAGGCTCTGGTAAAATATGGAAATTATGCTTTCGTATGGGATGCAGCTGTATTGGAATATGTGGCTATCAATG
ACCCAGATTGTTCCTTTTACACCATTGGAAATACTGTTGCTGATCGGGGATATGGAATTGCATTACAACATGGCAGTCCTTACCGAGATG
TTTTTTCACAAAGGATCCTGGAGCTTCAGCAGAATGGTGACATGGACATCCTGAAGCACAAATGGTGGCCTAAGAATGGCCAGTGTGACC
TGTACTCGTCAGTGGACACAAAGCAGAAAGGAGGCGCCCTGGACATAAAGAGCTTTGCAGGGGTCTTTTGTATCCTGGCTGCTGGAATTG
TCCTCTCCTGCTTCATAGCCATGCTGGAGACGTGGTGGAACAAGAGGAAAGGCTCCCGGGTTCCATCAAAAGAGGATGACAAGGAAATTG
ACCTGGAGCACCTCCATAGACGTGTAAATAGCTTGTGCACAGATGACGACAGCCCCCATAAACAGTTTTCCACCTCGTCAATTGATTTGA
CCCCTCTGGACATTGACACTTTGCCAACACGACAAGCACTGGAGCAAATCAGTGATTTCAGGAACACTCATATTACCACAACAACCTTTA
TCCCAGAGCAGATCCAGACTCTTAGCCGCACACTGTCAGCTAAAGCTGCTTCTGGTTTCACTTTTGGCAACGTGCCTGAGCACCGAACTG
GCCCTTTTAGGCACAGGGCACCTAATGGGGGCTTTTTCAGGAGTCCTATAAAAACAATGTCATCTATTCCTTATCAACCAACTCCTACCC
TGGGGCTCAATCTGGGTAATGATCCAGACCGAGGCACCTCCATATGAGCATCAAACAAATCTCTTCACTGTTTCTTTTTTAGGACTCCCT
TTGCAAGGAGCAACTGTAATATTGTGGGACTAACATGGATGTAACGTTTAAAAAAAAGATCAGGATTATTAGTAACAATTCTAGTTTTTT
CCTCCCACCTTCTCCCTCTCCTCTCTCCTCTATGATTTTCTCTCTTTCCCCCTCCCTTCCTGTACATTTTCCTCCACTTTTTTTCATTAC
TCAACTTGTTCCCCAAGAAGGTAGTGTACTAGGATCCTATTAGTCTGCTTTTCATATACTGTACATCAAGTATAGGAAATGTGCACTGAG
TATACTAAAAGTATATGCAGGATTAATTTTACATAAAGGCCTCTTCTGTAACATTTCTCTATTTTTTGAAATACAATTGCAATAACTTCA
GTCTTTTTACATTCTTCTGCTGCATCCATACAATGCTCCACTGCTGTTGAGTGTCCTTTAACTGTGGACCAAAGGCAACCCCTGCAGTGT
TTATAAAACAATTTTAAGACCATTCAGGCCACATAAGATGAGAATGCAATTTTGTAGGATTACAAAAAAGCCATTAATATGCCAGTCAAG
ACTACAGTTAAAACTACTCTTGCACTGCAACAGTGCATATGACCTTTATGTGATTGTACAGTATTAAAAGTTTTTTCTTATGTACAGTAA
ACTTTATCATATGGCAGAAGCCTCTATTGTGTTAAATAAATTAGTATTTCATATATATACATATATATGCACCTATATAATGTGTATATA
TATAAAAAGGCAGCCATTGCTATTGCAATTCATTTAATAAAGCTTTAGTTTAAACAAAAGTATTGTATACAGGAACTATGTATAGTGCAG
GGGTTCTTTTCAGTTAGAAAAGGCAGGTTGCTTTAATGTTATTCTGACTCGCATTGTTTGCCAACAGAAAATATTTTATACTTTTGTTAT
TAAAGCATCCAGGGCAATTTAATATTTGTTCCTAGATGTAACTCATTTGAATAGGTTTTGCATTTGTTATTCAGCAGTGTATAAAGCTAA
CCTTGATAATTTTACTTTTAATTAATTATCTAAATGAAAAATGCTATTAGCTGAACCACATCCACAACAGCACATAGAGCTCTAGAAGAG
TTGAAACATAGATCATTGAAGGTTAAAAATCCTCTTCCAAAGCAGCAAGTCAATCAATACAATAATGATATTTGGGGAGGGGTGGGAGCC
CTTAAGAACTATTGATGTGGCCTTAAATTACTGTCATTTATTATCCTAAAGAAGAAAACATAATAACCATAATGGGCTCTCAACTCAACT
CCCTTTTTTATTTAGTTCTATTTGGAGGAGTTATGTATTTTTTACATTAGTGCCAAGTATATAGAAGGATGACAGCAAAAACAGTGCCTC
TTTGTGCACAATCCTTTTAAAGTAGCATTCTTACTTGTTAGAAATGTAGAATGAACTTTGTTTGTAATCCTTAAATTAAAATGTGGTAAG
TAGGAAGCAAGAACTTATTCTGTGTTTTTACGCAGCCATACACTTACTTTAATCTAACTCATTCTGTGGCTAGGATTGATATAGGAATCA
ACCTATGTGATTTGCTTTAGGAGAAATTAAAAGGTATATTCTTAAGATATATTATATTTTGATGCTAATTCTGTTCTGGGGAGCATCTTG
TATTGTCACTGTTTTGTACTAAATCTTCAAATATTGTCTACTGTGTAAGGCAGAAAAATTTCTTATCATGCAAAAACCATTTTGTTTCCA
GGGTAACAAGTAACTAAGTGCATGCACAACTTGTTTTCCCTTGTAACATTCATGATCTCATTTACAACTCTGATTTTAAAACAAAAAAAT
CTTTACAACAAGCTATATAGGGACATACCAGATGTTGCAGTGATTTTAGCTATCAACAAACTGTTAACCATGTACAATATTTAAAATAGG
CTTATTTTGATGTATCGCCTATTATACAAACACACAAAACATTTTTGGAGGCCTCAGTTATGAGTGACAGAGCTTTCTGTGTATAATTTG

>In-frame_ENST00000457823_ENST00000282020_TCGA-DU-A7TD_SMARCAD1_chr4_95174158_+_GRID2_chr4_94547420_length(amino acids)=703AA_start in transcript=275_stop in transcript=2386
MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQ
YIDLSSDSEDVVSPNCSNTVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKELFPQRSDNDLLKL
IESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSIKKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQE
LREVLKEHEWMYTEALESLKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVVEDSEY
DSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALVKYGNYAFVWDAAVLEYVAINDP
DCSFYTIGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQCDLYSSVDTKQKGGALDIKSFAGVFCILAAGIVL
SCFIAMLETWWNKRKGSRVPSKEDDKEIDLEHLHRRVNSLCTDDDSPHKQFSTSSIDLTPLDIDTLPTRQALEQISDFRNTHITTTTFIP

--------------------------------------------------------------
>In-frame_ENST00000354268_ENST00000282020_TCGA-DU-A7TD_SMARCAD1_chr4_95174158_+_GRID2_chr4_94547420_length(transcript)=4243nt_BP=1354nt
GGGAACGTGCCTGCGCGTGCTTGGATAGTTCATTTAAAGCCCCCATCCCTGCAAGGTGGTGCTTTCTACCAATATGAATCTTTTCAACCT
GGACCGTTTTCGCTTTGAGAAAAGGAATAAGATTGAGGAAGCGCCCGAAGCAACCCCTCAACCTTCCCAGCCTGGCCCTTCTTCACCAAT
TTCTCTTAGTGCTGAAGAGGAGAATGCTGAAGGGGAAGTTAGCAGGGCAAACACTCCTGATTCAGATATAACTGAAAAAACAGAAGATTC
TAGTGTTCCAGAAACTCCAGATAATGAAAGAAAAGCAAGTATATCATATTTCAAAAATCAAAGAGGAATACAGTATATTGATTTGTCTTC
TGATAGTGAAGATGTCGTTTCCCCAAATTGCTCCAATACAGTTCAAGAGAAAACATTCAACAAAGATACAGTGATTATAGTTTCTGAGCC
ATCTGAAGATGAAGAGTCCCAAGGCCTTCCTACCATGGCACGTAGAAATGATGATATTTCAGAACTGGAAGACCTTTCGGAATTGGAAGA
CCTTAAAGATGCTAAACTTCAGACTTTGAAGGAACTTTTTCCACAAAGAAGTGACAATGATTTACTTAAGTTGATTGAATCAACAAGCAC
TATGGATGGAGCAATTGCTGCTGCCTTGCTGATGTTTGGTGATGCAGGTGGTGGGCCCAGGAAAAGAAAATTATCTTCTTCTTCAGAGCC
ATATGAGGAAGATGAATTTAATGATGATCAATCTATAAAAAAGACAAGACTGGATCATGGAGAGGAATCAAATGAGTCTGCAGAATCTAG
CAGTAATTGGGAAAAGCAGGAAAGTATTGTACTGAAATTGCAAAAGGAATTTCCCAATTTTGATAAACAGGAACTTAGAGAAGTACTCAA
GGAACATGAATGGATGTACACAGAAGCTTTAGAATCTCTAAAAGTGTTTGCAGAAGACCAAGATATGCAATATGTATCACAAAGTGAGGT
TCCAAATGGAAAAGAAGTTTCTTCAAGAAGTCAAAATTACCCTAAAAATGCAACTAAAACAAAACTAAAACAGAAATTTTCAATGAAAGC
ACAAAATGGCTTTAACAAGAAACGTAAAAAAAATGTTTTTAATCCAAAGAGAGTTGTTGAAGACTCTGAATATGATTCAGGTTCTGATGT
CGGTAGTTCACTAGATGAGGACTATAGTAGTGGTGAAGAAGTGATGGAGGATGGCTATAAAGGTAAAATTCTTCACTTCCTTCAAGATGC
TTCAATTGGTGAACTTACTTTGATTCCTCAGTGTTCTCAGAAAAAGGCTCAGAAGATAACAGAACTCCGGCCCTTTAATAGTTGGGAGGC
TCTGGTAAAATATGGAAATTATGCTTTCGTATGGGATGCAGCTGTATTGGAATATGTGGCTATCAATGACCCAGATTGTTCCTTTTACAC
CATTGGAAATACTGTTGCTGATCGGGGATATGGAATTGCATTACAACATGGCAGTCCTTACCGAGATGTTTTTTCACAAAGGATCCTGGA
GCTTCAGCAGAATGGTGACATGGACATCCTGAAGCACAAATGGTGGCCTAAGAATGGCCAGTGTGACCTGTACTCGTCAGTGGACACAAA
GCAGAAAGGAGGCGCCCTGGACATAAAGAGCTTTGCAGGGGTCTTTTGTATCCTGGCTGCTGGAATTGTCCTCTCCTGCTTCATAGCCAT
GCTGGAGACGTGGTGGAACAAGAGGAAAGGCTCCCGGGTTCCATCAAAAGAGGATGACAAGGAAATTGACCTGGAGCACCTCCATAGACG
TGTAAATAGCTTGTGCACAGATGACGACAGCCCCCATAAACAGTTTTCCACCTCGTCAATTGATTTGACCCCTCTGGACATTGACACTTT
GCCAACACGACAAGCACTGGAGCAAATCAGTGATTTCAGGAACACTCATATTACCACAACAACCTTTATCCCAGAGCAGATCCAGACTCT
TAGCCGCACACTGTCAGCTAAAGCTGCTTCTGGTTTCACTTTTGGCAACGTGCCTGAGCACCGAACTGGCCCTTTTAGGCACAGGGCACC
TAATGGGGGCTTTTTCAGGAGTCCTATAAAAACAATGTCATCTATTCCTTATCAACCAACTCCTACCCTGGGGCTCAATCTGGGTAATGA
TCCAGACCGAGGCACCTCCATATGAGCATCAAACAAATCTCTTCACTGTTTCTTTTTTAGGACTCCCTTTGCAAGGAGCAACTGTAATAT
TGTGGGACTAACATGGATGTAACGTTTAAAAAAAAGATCAGGATTATTAGTAACAATTCTAGTTTTTTCCTCCCACCTTCTCCCTCTCCT
CTCTCCTCTATGATTTTCTCTCTTTCCCCCTCCCTTCCTGTACATTTTCCTCCACTTTTTTTCATTACTCAACTTGTTCCCCAAGAAGGT
AGTGTACTAGGATCCTATTAGTCTGCTTTTCATATACTGTACATCAAGTATAGGAAATGTGCACTGAGTATACTAAAAGTATATGCAGGA
TTAATTTTACATAAAGGCCTCTTCTGTAACATTTCTCTATTTTTTGAAATACAATTGCAATAACTTCAGTCTTTTTACATTCTTCTGCTG
CATCCATACAATGCTCCACTGCTGTTGAGTGTCCTTTAACTGTGGACCAAAGGCAACCCCTGCAGTGTTTATAAAACAATTTTAAGACCA
TTCAGGCCACATAAGATGAGAATGCAATTTTGTAGGATTACAAAAAAGCCATTAATATGCCAGTCAAGACTACAGTTAAAACTACTCTTG
CACTGCAACAGTGCATATGACCTTTATGTGATTGTACAGTATTAAAAGTTTTTTCTTATGTACAGTAAACTTTATCATATGGCAGAAGCC
TCTATTGTGTTAAATAAATTAGTATTTCATATATATACATATATATGCACCTATATAATGTGTATATATATAAAAAGGCAGCCATTGCTA
TTGCAATTCATTTAATAAAGCTTTAGTTTAAACAAAAGTATTGTATACAGGAACTATGTATAGTGCAGGGGTTCTTTTCAGTTAGAAAAG
GCAGGTTGCTTTAATGTTATTCTGACTCGCATTGTTTGCCAACAGAAAATATTTTATACTTTTGTTATTAAAGCATCCAGGGCAATTTAA
TATTTGTTCCTAGATGTAACTCATTTGAATAGGTTTTGCATTTGTTATTCAGCAGTGTATAAAGCTAACCTTGATAATTTTACTTTTAAT
TAATTATCTAAATGAAAAATGCTATTAGCTGAACCACATCCACAACAGCACATAGAGCTCTAGAAGAGTTGAAACATAGATCATTGAAGG
TTAAAAATCCTCTTCCAAAGCAGCAAGTCAATCAATACAATAATGATATTTGGGGAGGGGTGGGAGCCCTTAAGAACTATTGATGTGGCC
TTAAATTACTGTCATTTATTATCCTAAAGAAGAAAACATAATAACCATAATGGGCTCTCAACTCAACTCCCTTTTTTATTTAGTTCTATT
TGGAGGAGTTATGTATTTTTTACATTAGTGCCAAGTATATAGAAGGATGACAGCAAAAACAGTGCCTCTTTGTGCACAATCCTTTTAAAG
TAGCATTCTTACTTGTTAGAAATGTAGAATGAACTTTGTTTGTAATCCTTAAATTAAAATGTGGTAAGTAGGAAGCAAGAACTTATTCTG
TGTTTTTACGCAGCCATACACTTACTTTAATCTAACTCATTCTGTGGCTAGGATTGATATAGGAATCAACCTATGTGATTTGCTTTAGGA
GAAATTAAAAGGTATATTCTTAAGATATATTATATTTTGATGCTAATTCTGTTCTGGGGAGCATCTTGTATTGTCACTGTTTTGTACTAA
ATCTTCAAATATTGTCTACTGTGTAAGGCAGAAAAATTTCTTATCATGCAAAAACCATTTTGTTTCCAGGGTAACAAGTAACTAAGTGCA
TGCACAACTTGTTTTCCCTTGTAACATTCATGATCTCATTTACAACTCTGATTTTAAAACAAAAAAATCTTTACAACAAGCTATATAGGG
ACATACCAGATGTTGCAGTGATTTTAGCTATCAACAAACTGTTAACCATGTACAATATTTAAAATAGGCTTATTTTGATGTATCGCCTAT
TATACAAACACACAAAACATTTTTGGAGGCCTCAGTTATGAGTGACAGAGCTTTCTGTGTATAATTTGTCTAAATAATTTGTCTAATAAA

>In-frame_ENST00000354268_ENST00000282020_TCGA-DU-A7TD_SMARCAD1_chr4_95174158_+_GRID2_chr4_94547420_length(amino acids)=703AA_start in transcript=73_stop in transcript=2184
MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRANTPDSDITEKTEDSSVPETPDNERKASISYFKNQRGIQ
YIDLSSDSEDVVSPNCSNTVQEKTFNKDTVIIVSEPSEDEESQGLPTMARRNDDISELEDLSELEDLKDAKLQTLKELFPQRSDNDLLKL
IESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSIKKTRLDHGEESNESAESSSNWEKQESIVLKLQKEFPNFDKQE
LREVLKEHEWMYTEALESLKVFAEDQDMQYVSQSEVPNGKEVSSRSQNYPKNATKTKLKQKFSMKAQNGFNKKRKKNVFNPKRVVEDSEY
DSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALVKYGNYAFVWDAAVLEYVAINDP
DCSFYTIGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQCDLYSSVDTKQKGGALDIKSFAGVFCILAAGIVL
SCFIAMLETWWNKRKGSRVPSKEDDKEIDLEHLHRRVNSLCTDDDSPHKQFSTSSIDLTPLDIDTLPTRQALEQISDFRNTHITTTTFIP

--------------------------------------------------------------

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Fusion Gene PPI Analysis for SMARCAD1-GRID2


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with
TgeneGRID2chr4:95174158chr4:94128554ENST00000282020316921_991245.01008.0AP4M1
TgeneGRID2chr4:95174158chr4:94128555ENST00000282020316921_991245.01008.0AP4M1
TgeneGRID2chr4:95174158chr4:94547419ENST000002820201216921_991731.01008.0AP4M1
TgeneGRID2chr4:95174158chr4:94547420ENST000002820201216921_991731.01008.0AP4M1


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with
TgeneGRID2chr4:95174158chr4:94128554ENST0000028202031624_345245.01008.0CBLN1 homotrimer
TgeneGRID2chr4:95174158chr4:94128555ENST0000028202031624_345245.01008.0CBLN1 homotrimer
TgeneGRID2chr4:95174158chr4:94547419ENST00000282020121624_345731.01008.0CBLN1 homotrimer
TgeneGRID2chr4:95174158chr4:94547420ENST00000282020121624_345731.01008.0CBLN1 homotrimer


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for SMARCAD1-GRID2


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for SMARCAD1-GRID2


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneSMARCAD1C0406707Basan syndrome3CTD_human;GENOMICS_ENGLAND;ORPHANET
HgeneSMARCAD1C4551675Keratoderma, Palmoplantar2GENOMICS_ENGLAND
HgeneSMARCAD1C0033578Prostatic Neoplasms1CTD_human
HgeneSMARCAD1C0376358Malignant neoplasm of prostate1CTD_human
HgeneSMARCAD1C0406767Keratoderma with scleroatrophy of the extremities1CTD_human;ORPHANET
HgeneSMARCAD1C1852150Fingerprints, Absence of1CTD_human;ORPHANET
TgeneGRID2C4015505SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 185GENOMICS_ENGLAND;ORPHANET;UNIPROT