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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:SMARCB1-TTC3 (FusionGDB2 ID:83350) |
Fusion Gene Summary for SMARCB1-TTC3 |
Fusion gene summary |
Fusion gene information | Fusion gene name: SMARCB1-TTC3 | Fusion gene ID: 83350 | Hgene | Tgene | Gene symbol | SMARCB1 | TTC3 | Gene ID | 6598 | 7267 |
Gene name | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 | tetratricopeptide repeat domain 3 | |
Synonyms | BAF47|CSS3|INI1|MRD15|PPP1R144|RDT|RTPS1|SNF5|SNF5L1|SWNTS1|Sfh1p|Snr1|hSNFS | DCRR1|RNF105|TPRDIII | |
Cytomap | 22q11.23|22q11 | 21q22.13 | |
Type of gene | protein-coding | protein-coding | |
Description | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1BRG1-associated factor 47SNF5 homologSWI/SNF-related matrix-associated proteinhSNF5integrase interactor 1 proteinmalignant rhabdoid tumor suppressorprotein | E3 ubiquitin-protein ligase TTC3RING finger protein 105RING-type E3 ubiquitin transferase TTC3TPR repeat protein 3TPR repeat protein Dtetratricopeptide repeat protein 3 | |
Modification date | 20200313 | 20200320 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000344921, ENST00000263121, ENST00000407422, ENST00000407082, ENST00000477836, | ENST00000355666, ENST00000399017, ENST00000354749, ENST00000479930, ENST00000540756, ENST00000399010, | |
Fusion gene scores | * DoF score | 14 X 15 X 8=1680 | 19 X 18 X 9=3078 |
# samples | 19 | 24 | |
** MAII score | log2(19/1680*10)=-3.14438990933518 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(24/3078*10)=-3.68088692071969 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: SMARCB1 [Title/Abstract] AND TTC3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | SMARCB1(24175831)-TTC3(38538777), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | SMARCB1 | GO:0006337 | nucleosome disassembly | 8895581 |
Hgene | SMARCB1 | GO:0006338 | chromatin remodeling | 11726552 |
Hgene | SMARCB1 | GO:0039692 | single stranded viral RNA replication via double stranded DNA intermediate | 14963118 |
Hgene | SMARCB1 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 11950834 |
Hgene | SMARCB1 | GO:0051091 | positive regulation of DNA-binding transcription factor activity | 11950834 |
Hgene | SMARCB1 | GO:1902661 | positive regulation of glucose mediated signaling pathway | 22368283 |
Tgene | TTC3 | GO:0006511 | ubiquitin-dependent protein catabolic process | 20059950 |
Tgene | TTC3 | GO:0070936 | protein K48-linked ubiquitination | 20059950 |
Fusion gene breakpoints across SMARCB1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across TTC3 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS5.0 | N/A | BI050912 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
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Fusion Gene ORF analysis for SMARCB1-TTC3 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000344921 | ENST00000355666 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
In-frame | ENST00000344921 | ENST00000399017 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
In-frame | ENST00000344921 | ENST00000354749 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
5CDS-3UTR | ENST00000344921 | ENST00000479930 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
5CDS-intron | ENST00000344921 | ENST00000540756 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
5CDS-intron | ENST00000344921 | ENST00000399010 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
In-frame | ENST00000263121 | ENST00000355666 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
In-frame | ENST00000263121 | ENST00000399017 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
In-frame | ENST00000263121 | ENST00000354749 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
5CDS-3UTR | ENST00000263121 | ENST00000479930 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
5CDS-intron | ENST00000263121 | ENST00000540756 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
5CDS-intron | ENST00000263121 | ENST00000399010 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
In-frame | ENST00000407422 | ENST00000355666 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
In-frame | ENST00000407422 | ENST00000399017 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
In-frame | ENST00000407422 | ENST00000354749 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
5CDS-3UTR | ENST00000407422 | ENST00000479930 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
5CDS-intron | ENST00000407422 | ENST00000540756 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
5CDS-intron | ENST00000407422 | ENST00000399010 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
In-frame | ENST00000407082 | ENST00000355666 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
In-frame | ENST00000407082 | ENST00000399017 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
In-frame | ENST00000407082 | ENST00000354749 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
5CDS-3UTR | ENST00000407082 | ENST00000479930 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
5CDS-intron | ENST00000407082 | ENST00000540756 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
5CDS-intron | ENST00000407082 | ENST00000399010 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
intron-3CDS | ENST00000477836 | ENST00000355666 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
intron-3CDS | ENST00000477836 | ENST00000399017 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
intron-3CDS | ENST00000477836 | ENST00000354749 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
intron-3UTR | ENST00000477836 | ENST00000479930 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
intron-intron | ENST00000477836 | ENST00000540756 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
intron-intron | ENST00000477836 | ENST00000399010 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000344921 | SMARCB1 | chr22 | 24175831 | + | ENST00000355666 | TTC3 | chr21 | 38538777 | - | 4625 | 1279 | 1236 | 3095 | 619 |
ENST00000344921 | SMARCB1 | chr22 | 24175831 | + | ENST00000399017 | TTC3 | chr21 | 38538777 | - | 4634 | 1279 | 1236 | 3095 | 619 |
ENST00000344921 | SMARCB1 | chr22 | 24175831 | + | ENST00000354749 | TTC3 | chr21 | 38538777 | - | 4634 | 1279 | 1236 | 3095 | 619 |
ENST00000263121 | SMARCB1 | chr22 | 24175831 | + | ENST00000355666 | TTC3 | chr21 | 38538777 | - | 4587 | 1241 | 1198 | 3057 | 619 |
ENST00000263121 | SMARCB1 | chr22 | 24175831 | + | ENST00000399017 | TTC3 | chr21 | 38538777 | - | 4596 | 1241 | 1198 | 3057 | 619 |
ENST00000263121 | SMARCB1 | chr22 | 24175831 | + | ENST00000354749 | TTC3 | chr21 | 38538777 | - | 4596 | 1241 | 1198 | 3057 | 619 |
ENST00000407422 | SMARCB1 | chr22 | 24175831 | + | ENST00000355666 | TTC3 | chr21 | 38538777 | - | 4540 | 1194 | 1151 | 3010 | 619 |
ENST00000407422 | SMARCB1 | chr22 | 24175831 | + | ENST00000399017 | TTC3 | chr21 | 38538777 | - | 4549 | 1194 | 1151 | 3010 | 619 |
ENST00000407422 | SMARCB1 | chr22 | 24175831 | + | ENST00000354749 | TTC3 | chr21 | 38538777 | - | 4549 | 1194 | 1151 | 3010 | 619 |
ENST00000407082 | SMARCB1 | chr22 | 24175831 | + | ENST00000355666 | TTC3 | chr21 | 38538777 | - | 4412 | 1066 | 1023 | 2882 | 619 |
ENST00000407082 | SMARCB1 | chr22 | 24175831 | + | ENST00000399017 | TTC3 | chr21 | 38538777 | - | 4421 | 1066 | 1023 | 2882 | 619 |
ENST00000407082 | SMARCB1 | chr22 | 24175831 | + | ENST00000354749 | TTC3 | chr21 | 38538777 | - | 4421 | 1066 | 1023 | 2882 | 619 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000344921 | ENST00000355666 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - | 0.000547533 | 0.9994524 |
ENST00000344921 | ENST00000399017 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - | 0.000550266 | 0.9994497 |
ENST00000344921 | ENST00000354749 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - | 0.000550266 | 0.9994497 |
ENST00000263121 | ENST00000355666 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - | 0.000518949 | 0.999481 |
ENST00000263121 | ENST00000399017 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - | 0.00052181 | 0.99947816 |
ENST00000263121 | ENST00000354749 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - | 0.00052181 | 0.99947816 |
ENST00000407422 | ENST00000355666 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - | 0.000539696 | 0.9994603 |
ENST00000407422 | ENST00000399017 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - | 0.000542777 | 0.9994572 |
ENST00000407422 | ENST00000354749 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - | 0.000542777 | 0.9994572 |
ENST00000407082 | ENST00000355666 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - | 0.000454174 | 0.99954575 |
ENST00000407082 | ENST00000399017 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - | 0.000457774 | 0.99954224 |
ENST00000407082 | ENST00000354749 | SMARCB1 | chr22 | 24175831 | + | TTC3 | chr21 | 38538777 | - | 0.000457774 | 0.99954224 |
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Fusion Genomic Features for SMARCB1-TTC3 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for SMARCB1-TTC3 |
Go to FGviewer for the breakpoints of chr22:24175831-chr21:38538777 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000354749 | 0 | 45 | 1018_1029 | 0 | 2026.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000354749 | 0 | 45 | 1020_1029 | 0 | 2026.0 | Compositional bias | Note=Poly-Lys | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000354749 | 0 | 45 | 1172_1185 | 0 | 2026.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000354749 | 0 | 45 | 1563_1579 | 0 | 2026.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000354749 | 0 | 45 | 1899_1902 | 0 | 2026.0 | Compositional bias | Note=Poly-Lys | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000354749 | 0 | 45 | 453_456 | 0 | 2026.0 | Compositional bias | Note=Poly-Ser | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000355666 | 0 | 46 | 1018_1029 | 0 | 2026.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000355666 | 0 | 46 | 1020_1029 | 0 | 2026.0 | Compositional bias | Note=Poly-Lys | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000355666 | 0 | 46 | 1172_1185 | 0 | 2026.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000355666 | 0 | 46 | 1563_1579 | 0 | 2026.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000355666 | 0 | 46 | 1899_1902 | 0 | 2026.0 | Compositional bias | Note=Poly-Lys | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000355666 | 0 | 46 | 453_456 | 0 | 2026.0 | Compositional bias | Note=Poly-Ser | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000399017 | 0 | 46 | 1018_1029 | 0 | 2026.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000399017 | 0 | 46 | 1020_1029 | 0 | 2026.0 | Compositional bias | Note=Poly-Lys | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000399017 | 0 | 46 | 1172_1185 | 0 | 2026.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000399017 | 0 | 46 | 1563_1579 | 0 | 2026.0 | Compositional bias | Note=Arg/Lys-rich (basic) | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000399017 | 0 | 46 | 1899_1902 | 0 | 2026.0 | Compositional bias | Note=Poly-Lys | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000399017 | 0 | 46 | 453_456 | 0 | 2026.0 | Compositional bias | Note=Poly-Ser | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000354749 | 0 | 45 | 231_264 | 0 | 2026.0 | Repeat | Note=TPR 1 | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000354749 | 0 | 45 | 266_298 | 0 | 2026.0 | Repeat | Note=TPR 2 | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000354749 | 0 | 45 | 536_572 | 0 | 2026.0 | Repeat | Note=TPR 3 | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000354749 | 0 | 45 | 576_609 | 0 | 2026.0 | Repeat | Note=TPR 4 | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000355666 | 0 | 46 | 231_264 | 0 | 2026.0 | Repeat | Note=TPR 1 | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000355666 | 0 | 46 | 266_298 | 0 | 2026.0 | Repeat | Note=TPR 2 | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000355666 | 0 | 46 | 536_572 | 0 | 2026.0 | Repeat | Note=TPR 3 | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000355666 | 0 | 46 | 576_609 | 0 | 2026.0 | Repeat | Note=TPR 4 | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000399017 | 0 | 46 | 231_264 | 0 | 2026.0 | Repeat | Note=TPR 1 | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000399017 | 0 | 46 | 266_298 | 0 | 2026.0 | Repeat | Note=TPR 2 | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000399017 | 0 | 46 | 536_572 | 0 | 2026.0 | Repeat | Note=TPR 3 | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000399017 | 0 | 46 | 576_609 | 0 | 2026.0 | Repeat | Note=TPR 4 | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000354749 | 0 | 45 | 1957_1997 | 0 | 2026.0 | Zinc finger | RING-type | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000355666 | 0 | 46 | 1957_1997 | 0 | 2026.0 | Zinc finger | RING-type | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000399017 | 0 | 46 | 1957_1997 | 0 | 2026.0 | Zinc finger | RING-type |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | SMARCB1 | chr22:24175831 | chr21:38538777 | ENST00000263121 | + | 1 | 9 | 183_243 | 0 | 386.0 | Region | Note=HIV-1 integrase-binding |
Hgene | SMARCB1 | chr22:24175831 | chr21:38538777 | ENST00000263121 | + | 1 | 9 | 186_245 | 0 | 386.0 | Region | MYC-binding |
Hgene | SMARCB1 | chr22:24175831 | chr21:38538777 | ENST00000263121 | + | 1 | 9 | 186_319 | 0 | 386.0 | Region | Note=2 X approximate tandem repeats |
Hgene | SMARCB1 | chr22:24175831 | chr21:38538777 | ENST00000263121 | + | 1 | 9 | 1_113 | 0 | 386.0 | Region | DNA-binding |
Hgene | SMARCB1 | chr22:24175831 | chr21:38538777 | ENST00000407422 | + | 1 | 9 | 183_243 | 0 | 377.0 | Region | Note=HIV-1 integrase-binding |
Hgene | SMARCB1 | chr22:24175831 | chr21:38538777 | ENST00000407422 | + | 1 | 9 | 186_245 | 0 | 377.0 | Region | MYC-binding |
Hgene | SMARCB1 | chr22:24175831 | chr21:38538777 | ENST00000407422 | + | 1 | 9 | 186_319 | 0 | 377.0 | Region | Note=2 X approximate tandem repeats |
Hgene | SMARCB1 | chr22:24175831 | chr21:38538777 | ENST00000407422 | + | 1 | 9 | 1_113 | 0 | 377.0 | Region | DNA-binding |
Hgene | SMARCB1 | chr22:24175831 | chr21:38538777 | ENST00000263121 | + | 1 | 9 | 259_319 | 0 | 386.0 | Repeat | Note=2 |
Hgene | SMARCB1 | chr22:24175831 | chr21:38538777 | ENST00000407422 | + | 1 | 9 | 259_319 | 0 | 377.0 | Repeat | Note=2 |
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Fusion Gene Sequence for SMARCB1-TTC3 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000344921_ENST00000355666_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(transcript)=4625nt_BP=1279nt AACGCCAGCGCCTGCGCACTGAGGGCGGCCTGGTCGTCGTCTGCGGCGGCGGCGGCGGCTGAGGAGCCCGGCTGAGGCGCCAGTACCCGG CCCGGTCCGCATTTCGCCTTCCGGCTTCGGTTTCCCTCGGCCCAGCACGCCCCGGCCCCGCCCCAGCCCTCCTGATCCCTCGCAGCCCGG CTCCGGCCGCCCGCCTCTGCCGCCGCAATGATGATGATGGCGCTGAGCAAGACCTTCGGGCAGAAGCCCGTGAAGTTCCAGCTGGAGGAC GACGGCGAGTTCTACATGATCGGCTCCGAGGTGGGAAACTACCTCCGTATGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACTCTGG AGGCGACTAGCCACTGTGGAAGAGAGGAAGAAAATAGTTGCATCGTCACATGATCACGGATACACGACTCTAGCCACCAGTGTGACCCTG TTAAAAGCCTCGGAAGTGGAAGAGATTCTGGATGGCAACGATGAGAAGTACAAGGCTGTGTCCATCAGCACAGAGCCCCCCACCTACCTC AGGGAACAGAAGGCCAAGAGGAACAGCCAGTGGGTACCCACCCTGCCCAACAGCTCCCACCACTTAGATGCCGTGCCATGCTCCACAACC ATCAACAGGAACCGCATGGGCCGAGACAAGAAGAGAACCTTCCCCCTTTGGTGTGGATGCATCGCTGCACTCACCCTCCGTGCTGATTCC GCCTTAGTTCTCCACTTTGATGACCATGACCCAGCTGTGATCCATGAGAACGCATCTCAGCCCGAGGTGCTGGTCCCCATCCGGCTGGAC ATGGAGATCGATGGGCAGAAGCTGCGAGACGCCTTCACCTGGAACATGAATGAGAAGTTGATGACGCCTGAGATGTTTTCAGAAATCCTC TGTGACGATCTGGATTTGAACCCGCTGACGTTTGTGCCAGCCATCGCCTCTGCCATCAGACAGCAGATCGAGTCCTACCCCACGGACAGC ATCCTGGAGGACCAGTCAGACCAGCGCGTCATCATCAAGCTGAACATCCATGTGGGAAACATTTCCCTGGTGGACCAGTTTGAGTGGGAC ATGTCAGAGAAGGAGAACTCACCAGAGAAGTTTGCCCTGAAGCTGTGCTCGGAGCTGGGGTTGGGCGGGGAGTTTGTCACCACCATCGCA TACAGCATCCGGGGACAGCTGAGCTGGCATCAGAAGACCTACGCCTTCAGGAGACTCTGACAGACGCTGAGATGGAGAAGAAGATCCGCG ACCAGGACAGGAACACGAGCAGGTGATGCTCATACAGTCCTGAGTGAGTCTAACAGAAATGATGAGCACTGTGGAAATTCTAACAACAAA TGTGAAGTAATTCCAGAAAGCACCAGTGCAGTAACAAACATTCCACACGTGCAGATGGTTGCCATACAGGTATCTTGGAACATAATACAC CAAGAAGTCAATACTGAGCCATATAATCCTTTTGAGGAACGACAAGGGGAAATTTCACGGATTGAAAAGGAGCACCAAGTATTACAAGAC CAACTTCAAGAAGTGTATGAAAATTATGAGCAGATAAAACTTAAGGGCTTAGAAGAGACCAGGGACCTGGAAGAGAAGTTGAAAAGGCAC TTAGAAGAAAACAAGATCTCAAAGACGGAATTAGATTGGTTCCTTCAAGATTTGGAAAGAGAAATTAAAAAATGGCAACAGGAAAAAAAA GAAATCCAAGAAAGACTAAAATCACTGAAGAAGAAAATTAAAAAGGTTTCAAATGCCAGTGAAATGTATACCCAGAAAAATGATGGAAAG GAAAAGGAACATGAATTACATCTGGATCAGTCCCTTGAAATCAGCAACACACTTACAAATGAGAAAATGAAAATAGAAGAGTATATAAAG AAAGGGAAAGAGGATTATGAAGAGAGTCATCAGAGAGCTGTGGCTGCAGAGGTATCCGTACTTGAAAACTGGAAGGAGAGTGAAGTGTAT AAGCTACAGATCATGGAGTCACAAGCAGAAGCCTTTCTGAAGAAGCTGGGGCTGATTAGCCGTGATCCTGCAGCATATCCTGACATGGAG TCTGATATACGTTCATGGGAATTGTTTCTTTCTAATGTTACAAAAGAAATTGAGAAAGCAAAGTCTCAGTTTGAAGAACAAATTAAGGCA ATTAAAAATGGTTCTCGGCTCAGTGAACTTTCTAAAGTGCAGATTTCTGAGCTTTCATTTCCTGCCTGTAACACGGTTCATCCCGAGTTA CTCCCTGAGTCTTCAGGCGACGATGGCCAAGGGCTTGTGACTTCTGCAAGCGACGTGACTGGAAACCACGCAGCACTTCACAGGGATCCT AGTGTGTTCTCTGCTGGTGATTCCCCAGGGGAGGCTCCTTCTGCGCTGTTGCCAGGGCCACCCCCTGGTCAGCCTGAAGCCACTCAGCTG ACAGGGCCAAAACGGGCTGGCCAGGCAGCTCTGTCAGAACGAAGCCCTGTGGCTGATCGGAAGCAGCCTGTTCCTCCAGGACGTGCTGCG CGTTCAAGCCAGTCTCCAAAAAAGCCGTTCAATAGTATTATTGAGCACCTGTCAGTGGTATTCCCATGTTACAACAGCACTGAGCTTGCT GGTTTTATTAAAAAAGTGCGAAGCAAAAACAAGAACTCACTCTCAGGATTGAGTATTGATGAAATTGTCCAAAGAGTGACAGAACACATT CTAGATGAACAGAAAAAGAAAAAGCCAAACCCAGGAAAGGACAAGAGGACTTATGAGCCCAGCTCTGCCACCCCCGTGACCAGGTCCTCC CAGGGCTCACCCTCGGTGGTTGTTGCACCATCACCCAAAACCAAGGGGCAGAAAGCAGAAGATGTCCCTGTGAGGATTGCACTGGGTGCA AGTTCCTGTGAAATATGCCACGAGGTGTTCAAATCAAAAAACGTGCGTGTGCTCAAATGTGGGCACAAGTATCACAAAGGGTGCTTTAAG CAGTGGCTTAAAGGGCAGAGCGCTTGCCCGGCCTGCCAGGGTCGTGATCTCCTGACAGAAGAGTCACCTTCTGGAAGAGGCTGGCCCAGT CAGAATCAGGAGCTGCCTTCCTGCTCTTCTAGGTAGTCACACTTCACTAAAGTGTCATCCACCAGTGTGTTGAATCCGAAGAATGACAAT TTTCTACCACTGGTGTAAAAAACAAACATTTGAAGACCCTTGTGCATTGTGTGTCACAAAGCTAAATACATGGAAATCGTTAATATCGCT GATATTAAGTAATTTCCCCACTCTGAGTGAATACTTTGATGATTGCCAACAGTGGCTAATAAAATGACGGCTACCACACTCATGGGTCAC TGGGGCTGCGCAGGGCTCTTTGAGGTGGGTGGCTTCTTTTGGAAAGTACTATGAACGTCTCGAAGCAGTATTCTAGTGATAAGAATTCTT AACATAGCCAAGCGCCCCACGTTTGTTCCCCACGTTTGTTCCCCTTTTCTGTTTGAAAAACCTGTTCTGGTAGCTCCACAAGAGAGATGA TACTGACTTTTTAAATTTTTTACAAGAGTCTGTATTCCTGATATGCCTATATTTTTCCTCAAAGATTCTGCATTTTAAGGATGGGCATAA GCAAACTATATTTTAATAATTTATAGTTAATGTTAAAATATTGGCTGATTTAGACCAAAAGATTCAAATCTCCTCTTTGTGAAATCCCAT CTGCATTTGATTTTTTATTATTTTATGTTCCCCCGTTAGATTGTTTTAAGTGTTTGCTTTTCATCTTTTATAGATGTAATCTGATTTTCA AAAATCATTAACACTTTTTAATTAGTATCGACTAAGACTTTTTCCCCCTGGAATCGAGGCTGTGTGTCCGTCATCCCAGCCCCCGGTTGG AGCCTGCTCTTTGAACTCCGCTGCCTTCCTTAGCAGCTTCTGTCCTCTTCTGTGAGTCAGTCAGCGAGTGCTTGGGATCCGCATCCAGCC GTGCTGAGCACACAACAGGCTGTGTGTGGAAATGGCCACCACCATTCTCCTTCCCCACCCCACCACAAAAAGAGAAGCTGTGTCTTTAGA CAACCCTGAGGTATCTGTGTTACAATCGTTCTGTGTTTGATATTTGTGTAAAGTATGCATGCAGTCTTGTACTGTGACCTAAGAACAAAA CTGTAACTGCATTAGAAACCATGAAAAAATTAGATATTGTTTTGTGACTTTTAGACAGTGGTAAATATAGAACCATGAATTCTGGTCACA TTCCATTTCTCTCCAACATGAAGGATCAAAAAATGTTTTTCAATGTGTTCTTTGTTCCACTGGAAACTTAGAGTCATGAGTTTATGAGCT GATTTGGTCACCTTCCTCTGCCTTTGTTCACTGTGAGTTCTGATGTCTTAGTGACTTAGTTCTTAGAAGCTCACGCCTTAGTTTGAAACA GATTCTCCACGGTGGTCCCCAAAACACTGTCTGCATATCCATAAGAATTGAGCGCTATGGGTGTTAACGTGCATGAGGATCAGTTTGCAG CAGCAAGTACAAAAGGAGAAGAGGAACATCCGTTGAATGAGTGTGTTTTGTACATAACTTCAGATACTTGTGAACATGCCTTATATTTGT >In-frame_ENST00000344921_ENST00000355666_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(amino acids)=619AA_start in transcript=1236_stop in transcript=3095 MRWRRRSATRTGTRAGDAHTVLSESNRNDEHCGNSNNKCEVIPESTSAVTNIPHVQMVAIQVSWNIIHQEVNTEPYNPFEERQGEISRIE KEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEM YTQKNDGKEKEHELHLDQSLEISNTLTNEKMKIEEYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLKKLGLISRD PAAYPDMESDIRSWELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNTVHPELLPESSGDDGQGLVTSASDVTGN HAALHRDPSVFSAGDSPGEAPSALLPGPPPGQPEATQLTGPKRAGQAALSERSPVADRKQPVPPGRAARSSQSPKKPFNSIIEHLSVVFP CYNSTELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKAEDV -------------------------------------------------------------- >In-frame_ENST00000344921_ENST00000399017_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(transcript)=4634nt_BP=1279nt AACGCCAGCGCCTGCGCACTGAGGGCGGCCTGGTCGTCGTCTGCGGCGGCGGCGGCGGCTGAGGAGCCCGGCTGAGGCGCCAGTACCCGG CCCGGTCCGCATTTCGCCTTCCGGCTTCGGTTTCCCTCGGCCCAGCACGCCCCGGCCCCGCCCCAGCCCTCCTGATCCCTCGCAGCCCGG CTCCGGCCGCCCGCCTCTGCCGCCGCAATGATGATGATGGCGCTGAGCAAGACCTTCGGGCAGAAGCCCGTGAAGTTCCAGCTGGAGGAC GACGGCGAGTTCTACATGATCGGCTCCGAGGTGGGAAACTACCTCCGTATGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACTCTGG AGGCGACTAGCCACTGTGGAAGAGAGGAAGAAAATAGTTGCATCGTCACATGATCACGGATACACGACTCTAGCCACCAGTGTGACCCTG TTAAAAGCCTCGGAAGTGGAAGAGATTCTGGATGGCAACGATGAGAAGTACAAGGCTGTGTCCATCAGCACAGAGCCCCCCACCTACCTC AGGGAACAGAAGGCCAAGAGGAACAGCCAGTGGGTACCCACCCTGCCCAACAGCTCCCACCACTTAGATGCCGTGCCATGCTCCACAACC ATCAACAGGAACCGCATGGGCCGAGACAAGAAGAGAACCTTCCCCCTTTGGTGTGGATGCATCGCTGCACTCACCCTCCGTGCTGATTCC GCCTTAGTTCTCCACTTTGATGACCATGACCCAGCTGTGATCCATGAGAACGCATCTCAGCCCGAGGTGCTGGTCCCCATCCGGCTGGAC ATGGAGATCGATGGGCAGAAGCTGCGAGACGCCTTCACCTGGAACATGAATGAGAAGTTGATGACGCCTGAGATGTTTTCAGAAATCCTC TGTGACGATCTGGATTTGAACCCGCTGACGTTTGTGCCAGCCATCGCCTCTGCCATCAGACAGCAGATCGAGTCCTACCCCACGGACAGC ATCCTGGAGGACCAGTCAGACCAGCGCGTCATCATCAAGCTGAACATCCATGTGGGAAACATTTCCCTGGTGGACCAGTTTGAGTGGGAC ATGTCAGAGAAGGAGAACTCACCAGAGAAGTTTGCCCTGAAGCTGTGCTCGGAGCTGGGGTTGGGCGGGGAGTTTGTCACCACCATCGCA TACAGCATCCGGGGACAGCTGAGCTGGCATCAGAAGACCTACGCCTTCAGGAGACTCTGACAGACGCTGAGATGGAGAAGAAGATCCGCG ACCAGGACAGGAACACGAGCAGGTGATGCTCATACAGTCCTGAGTGAGTCTAACAGAAATGATGAGCACTGTGGAAATTCTAACAACAAA TGTGAAGTAATTCCAGAAAGCACCAGTGCAGTAACAAACATTCCACACGTGCAGATGGTTGCCATACAGGTATCTTGGAACATAATACAC CAAGAAGTCAATACTGAGCCATATAATCCTTTTGAGGAACGACAAGGGGAAATTTCACGGATTGAAAAGGAGCACCAAGTATTACAAGAC CAACTTCAAGAAGTGTATGAAAATTATGAGCAGATAAAACTTAAGGGCTTAGAAGAGACCAGGGACCTGGAAGAGAAGTTGAAAAGGCAC TTAGAAGAAAACAAGATCTCAAAGACGGAATTAGATTGGTTCCTTCAAGATTTGGAAAGAGAAATTAAAAAATGGCAACAGGAAAAAAAA GAAATCCAAGAAAGACTAAAATCACTGAAGAAGAAAATTAAAAAGGTTTCAAATGCCAGTGAAATGTATACCCAGAAAAATGATGGAAAG GAAAAGGAACATGAATTACATCTGGATCAGTCCCTTGAAATCAGCAACACACTTACAAATGAGAAAATGAAAATAGAAGAGTATATAAAG AAAGGGAAAGAGGATTATGAAGAGAGTCATCAGAGAGCTGTGGCTGCAGAGGTATCCGTACTTGAAAACTGGAAGGAGAGTGAAGTGTAT AAGCTACAGATCATGGAGTCACAAGCAGAAGCCTTTCTGAAGAAGCTGGGGCTGATTAGCCGTGATCCTGCAGCATATCCTGACATGGAG TCTGATATACGTTCATGGGAATTGTTTCTTTCTAATGTTACAAAAGAAATTGAGAAAGCAAAGTCTCAGTTTGAAGAACAAATTAAGGCA ATTAAAAATGGTTCTCGGCTCAGTGAACTTTCTAAAGTGCAGATTTCTGAGCTTTCATTTCCTGCCTGTAACACGGTTCATCCCGAGTTA CTCCCTGAGTCTTCAGGCGACGATGGCCAAGGGCTTGTGACTTCTGCAAGCGACGTGACTGGAAACCACGCAGCACTTCACAGGGATCCT AGTGTGTTCTCTGCTGGTGATTCCCCAGGGGAGGCTCCTTCTGCGCTGTTGCCAGGGCCACCCCCTGGTCAGCCTGAAGCCACTCAGCTG ACAGGGCCAAAACGGGCTGGCCAGGCAGCTCTGTCAGAACGAAGCCCTGTGGCTGATCGGAAGCAGCCTGTTCCTCCAGGACGTGCTGCG CGTTCAAGCCAGTCTCCAAAAAAGCCGTTCAATAGTATTATTGAGCACCTGTCAGTGGTATTCCCATGTTACAACAGCACTGAGCTTGCT GGTTTTATTAAAAAAGTGCGAAGCAAAAACAAGAACTCACTCTCAGGATTGAGTATTGATGAAATTGTCCAAAGAGTGACAGAACACATT CTAGATGAACAGAAAAAGAAAAAGCCAAACCCAGGAAAGGACAAGAGGACTTATGAGCCCAGCTCTGCCACCCCCGTGACCAGGTCCTCC CAGGGCTCACCCTCGGTGGTTGTTGCACCATCACCCAAAACCAAGGGGCAGAAAGCAGAAGATGTCCCTGTGAGGATTGCACTGGGTGCA AGTTCCTGTGAAATATGCCACGAGGTGTTCAAATCAAAAAACGTGCGTGTGCTCAAATGTGGGCACAAGTATCACAAAGGGTGCTTTAAG CAGTGGCTTAAAGGGCAGAGCGCTTGCCCGGCCTGCCAGGGTCGTGATCTCCTGACAGAAGAGTCACCTTCTGGAAGAGGCTGGCCCAGT CAGAATCAGGAGCTGCCTTCCTGCTCTTCTAGGTAGTCACACTTCACTAAAGTGTCATCCACCAGTGTGTTGAATCCGAAGAATGACAAT TTTCTACCACTGGTGTAAAAAACAAACATTTGAAGACCCTTGTGCATTGTGTGTCACAAAGCTAAATACATGGAAATCGTTAATATCGCT GATATTAAGTAATTTCCCCACTCTGAGTGAATACTTTGATGATTGCCAACAGTGGCTAATAAAATGACGGCTACCACACTCATGGGTCAC TGGGGCTGCGCAGGGCTCTTTGAGGTGGGTGGCTTCTTTTGGAAAGTACTATGAACGTCTCGAAGCAGTATTCTAGTGATAAGAATTCTT AACATAGCCAAGCGCCCCACGTTTGTTCCCCACGTTTGTTCCCCTTTTCTGTTTGAAAAACCTGTTCTGGTAGCTCCACAAGAGAGATGA TACTGACTTTTTAAATTTTTTACAAGAGTCTGTATTCCTGATATGCCTATATTTTTCCTCAAAGATTCTGCATTTTAAGGATGGGCATAA GCAAACTATATTTTAATAATTTATAGTTAATGTTAAAATATTGGCTGATTTAGACCAAAAGATTCAAATCTCCTCTTTGTGAAATCCCAT CTGCATTTGATTTTTTATTATTTTATGTTCCCCCGTTAGATTGTTTTAAGTGTTTGCTTTTCATCTTTTATAGATGTAATCTGATTTTCA AAAATCATTAACACTTTTTAATTAGTATCGACTAAGACTTTTTCCCCCTGGAATCGAGGCTGTGTGTCCGTCATCCCAGCCCCCGGTTGG AGCCTGCTCTTTGAACTCCGCTGCCTTCCTTAGCAGCTTCTGTCCTCTTCTGTGAGTCAGTCAGCGAGTGCTTGGGATCCGCATCCAGCC GTGCTGAGCACACAACAGGCTGTGTGTGGAAATGGCCACCACCATTCTCCTTCCCCACCCCACCACAAAAAGAGAAGCTGTGTCTTTAGA CAACCCTGAGGTATCTGTGTTACAATCGTTCTGTGTTTGATATTTGTGTAAAGTATGCATGCAGTCTTGTACTGTGACCTAAGAACAAAA CTGTAACTGCATTAGAAACCATGAAAAAATTAGATATTGTTTTGTGACTTTTAGACAGTGGTAAATATAGAACCATGAATTCTGGTCACA TTCCATTTCTCTCCAACATGAAGGATCAAAAAATGTTTTTCAATGTGTTCTTTGTTCCACTGGAAACTTAGAGTCATGAGTTTATGAGCT GATTTGGTCACCTTCCTCTGCCTTTGTTCACTGTGAGTTCTGATGTCTTAGTGACTTAGTTCTTAGAAGCTCACGCCTTAGTTTGAAACA GATTCTCCACGGTGGTCCCCAAAACACTGTCTGCATATCCATAAGAATTGAGCGCTATGGGTGTTAACGTGCATGAGGATCAGTTTGCAG CAGCAAGTACAAAAGGAGAAGAGGAACATCCGTTGAATGAGTGTGTTTTGTACATAACTTCAGATACTTGTGAACATGCCTTATATTTGT >In-frame_ENST00000344921_ENST00000399017_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(amino acids)=619AA_start in transcript=1236_stop in transcript=3095 MRWRRRSATRTGTRAGDAHTVLSESNRNDEHCGNSNNKCEVIPESTSAVTNIPHVQMVAIQVSWNIIHQEVNTEPYNPFEERQGEISRIE KEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEM YTQKNDGKEKEHELHLDQSLEISNTLTNEKMKIEEYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLKKLGLISRD PAAYPDMESDIRSWELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNTVHPELLPESSGDDGQGLVTSASDVTGN HAALHRDPSVFSAGDSPGEAPSALLPGPPPGQPEATQLTGPKRAGQAALSERSPVADRKQPVPPGRAARSSQSPKKPFNSIIEHLSVVFP CYNSTELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKAEDV -------------------------------------------------------------- >In-frame_ENST00000344921_ENST00000354749_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(transcript)=4634nt_BP=1279nt AACGCCAGCGCCTGCGCACTGAGGGCGGCCTGGTCGTCGTCTGCGGCGGCGGCGGCGGCTGAGGAGCCCGGCTGAGGCGCCAGTACCCGG CCCGGTCCGCATTTCGCCTTCCGGCTTCGGTTTCCCTCGGCCCAGCACGCCCCGGCCCCGCCCCAGCCCTCCTGATCCCTCGCAGCCCGG CTCCGGCCGCCCGCCTCTGCCGCCGCAATGATGATGATGGCGCTGAGCAAGACCTTCGGGCAGAAGCCCGTGAAGTTCCAGCTGGAGGAC GACGGCGAGTTCTACATGATCGGCTCCGAGGTGGGAAACTACCTCCGTATGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACTCTGG AGGCGACTAGCCACTGTGGAAGAGAGGAAGAAAATAGTTGCATCGTCACATGATCACGGATACACGACTCTAGCCACCAGTGTGACCCTG TTAAAAGCCTCGGAAGTGGAAGAGATTCTGGATGGCAACGATGAGAAGTACAAGGCTGTGTCCATCAGCACAGAGCCCCCCACCTACCTC AGGGAACAGAAGGCCAAGAGGAACAGCCAGTGGGTACCCACCCTGCCCAACAGCTCCCACCACTTAGATGCCGTGCCATGCTCCACAACC ATCAACAGGAACCGCATGGGCCGAGACAAGAAGAGAACCTTCCCCCTTTGGTGTGGATGCATCGCTGCACTCACCCTCCGTGCTGATTCC GCCTTAGTTCTCCACTTTGATGACCATGACCCAGCTGTGATCCATGAGAACGCATCTCAGCCCGAGGTGCTGGTCCCCATCCGGCTGGAC ATGGAGATCGATGGGCAGAAGCTGCGAGACGCCTTCACCTGGAACATGAATGAGAAGTTGATGACGCCTGAGATGTTTTCAGAAATCCTC TGTGACGATCTGGATTTGAACCCGCTGACGTTTGTGCCAGCCATCGCCTCTGCCATCAGACAGCAGATCGAGTCCTACCCCACGGACAGC ATCCTGGAGGACCAGTCAGACCAGCGCGTCATCATCAAGCTGAACATCCATGTGGGAAACATTTCCCTGGTGGACCAGTTTGAGTGGGAC ATGTCAGAGAAGGAGAACTCACCAGAGAAGTTTGCCCTGAAGCTGTGCTCGGAGCTGGGGTTGGGCGGGGAGTTTGTCACCACCATCGCA TACAGCATCCGGGGACAGCTGAGCTGGCATCAGAAGACCTACGCCTTCAGGAGACTCTGACAGACGCTGAGATGGAGAAGAAGATCCGCG ACCAGGACAGGAACACGAGCAGGTGATGCTCATACAGTCCTGAGTGAGTCTAACAGAAATGATGAGCACTGTGGAAATTCTAACAACAAA TGTGAAGTAATTCCAGAAAGCACCAGTGCAGTAACAAACATTCCACACGTGCAGATGGTTGCCATACAGGTATCTTGGAACATAATACAC CAAGAAGTCAATACTGAGCCATATAATCCTTTTGAGGAACGACAAGGGGAAATTTCACGGATTGAAAAGGAGCACCAAGTATTACAAGAC CAACTTCAAGAAGTGTATGAAAATTATGAGCAGATAAAACTTAAGGGCTTAGAAGAGACCAGGGACCTGGAAGAGAAGTTGAAAAGGCAC TTAGAAGAAAACAAGATCTCAAAGACGGAATTAGATTGGTTCCTTCAAGATTTGGAAAGAGAAATTAAAAAATGGCAACAGGAAAAAAAA GAAATCCAAGAAAGACTAAAATCACTGAAGAAGAAAATTAAAAAGGTTTCAAATGCCAGTGAAATGTATACCCAGAAAAATGATGGAAAG GAAAAGGAACATGAATTACATCTGGATCAGTCCCTTGAAATCAGCAACACACTTACAAATGAGAAAATGAAAATAGAAGAGTATATAAAG AAAGGGAAAGAGGATTATGAAGAGAGTCATCAGAGAGCTGTGGCTGCAGAGGTATCCGTACTTGAAAACTGGAAGGAGAGTGAAGTGTAT AAGCTACAGATCATGGAGTCACAAGCAGAAGCCTTTCTGAAGAAGCTGGGGCTGATTAGCCGTGATCCTGCAGCATATCCTGACATGGAG TCTGATATACGTTCATGGGAATTGTTTCTTTCTAATGTTACAAAAGAAATTGAGAAAGCAAAGTCTCAGTTTGAAGAACAAATTAAGGCA ATTAAAAATGGTTCTCGGCTCAGTGAACTTTCTAAAGTGCAGATTTCTGAGCTTTCATTTCCTGCCTGTAACACGGTTCATCCCGAGTTA CTCCCTGAGTCTTCAGGCGACGATGGCCAAGGGCTTGTGACTTCTGCAAGCGACGTGACTGGAAACCACGCAGCACTTCACAGGGATCCT AGTGTGTTCTCTGCTGGTGATTCCCCAGGGGAGGCTCCTTCTGCGCTGTTGCCAGGGCCACCCCCTGGTCAGCCTGAAGCCACTCAGCTG ACAGGGCCAAAACGGGCTGGCCAGGCAGCTCTGTCAGAACGAAGCCCTGTGGCTGATCGGAAGCAGCCTGTTCCTCCAGGACGTGCTGCG CGTTCAAGCCAGTCTCCAAAAAAGCCGTTCAATAGTATTATTGAGCACCTGTCAGTGGTATTCCCATGTTACAACAGCACTGAGCTTGCT GGTTTTATTAAAAAAGTGCGAAGCAAAAACAAGAACTCACTCTCAGGATTGAGTATTGATGAAATTGTCCAAAGAGTGACAGAACACATT CTAGATGAACAGAAAAAGAAAAAGCCAAACCCAGGAAAGGACAAGAGGACTTATGAGCCCAGCTCTGCCACCCCCGTGACCAGGTCCTCC CAGGGCTCACCCTCGGTGGTTGTTGCACCATCACCCAAAACCAAGGGGCAGAAAGCAGAAGATGTCCCTGTGAGGATTGCACTGGGTGCA AGTTCCTGTGAAATATGCCACGAGGTGTTCAAATCAAAAAACGTGCGTGTGCTCAAATGTGGGCACAAGTATCACAAAGGGTGCTTTAAG CAGTGGCTTAAAGGGCAGAGCGCTTGCCCGGCCTGCCAGGGTCGTGATCTCCTGACAGAAGAGTCACCTTCTGGAAGAGGCTGGCCCAGT CAGAATCAGGAGCTGCCTTCCTGCTCTTCTAGGTAGTCACACTTCACTAAAGTGTCATCCACCAGTGTGTTGAATCCGAAGAATGACAAT TTTCTACCACTGGTGTAAAAAACAAACATTTGAAGACCCTTGTGCATTGTGTGTCACAAAGCTAAATACATGGAAATCGTTAATATCGCT GATATTAAGTAATTTCCCCACTCTGAGTGAATACTTTGATGATTGCCAACAGTGGCTAATAAAATGACGGCTACCACACTCATGGGTCAC TGGGGCTGCGCAGGGCTCTTTGAGGTGGGTGGCTTCTTTTGGAAAGTACTATGAACGTCTCGAAGCAGTATTCTAGTGATAAGAATTCTT AACATAGCCAAGCGCCCCACGTTTGTTCCCCACGTTTGTTCCCCTTTTCTGTTTGAAAAACCTGTTCTGGTAGCTCCACAAGAGAGATGA TACTGACTTTTTAAATTTTTTACAAGAGTCTGTATTCCTGATATGCCTATATTTTTCCTCAAAGATTCTGCATTTTAAGGATGGGCATAA GCAAACTATATTTTAATAATTTATAGTTAATGTTAAAATATTGGCTGATTTAGACCAAAAGATTCAAATCTCCTCTTTGTGAAATCCCAT CTGCATTTGATTTTTTATTATTTTATGTTCCCCCGTTAGATTGTTTTAAGTGTTTGCTTTTCATCTTTTATAGATGTAATCTGATTTTCA AAAATCATTAACACTTTTTAATTAGTATCGACTAAGACTTTTTCCCCCTGGAATCGAGGCTGTGTGTCCGTCATCCCAGCCCCCGGTTGG AGCCTGCTCTTTGAACTCCGCTGCCTTCCTTAGCAGCTTCTGTCCTCTTCTGTGAGTCAGTCAGCGAGTGCTTGGGATCCGCATCCAGCC GTGCTGAGCACACAACAGGCTGTGTGTGGAAATGGCCACCACCATTCTCCTTCCCCACCCCACCACAAAAAGAGAAGCTGTGTCTTTAGA CAACCCTGAGGTATCTGTGTTACAATCGTTCTGTGTTTGATATTTGTGTAAAGTATGCATGCAGTCTTGTACTGTGACCTAAGAACAAAA CTGTAACTGCATTAGAAACCATGAAAAAATTAGATATTGTTTTGTGACTTTTAGACAGTGGTAAATATAGAACCATGAATTCTGGTCACA TTCCATTTCTCTCCAACATGAAGGATCAAAAAATGTTTTTCAATGTGTTCTTTGTTCCACTGGAAACTTAGAGTCATGAGTTTATGAGCT GATTTGGTCACCTTCCTCTGCCTTTGTTCACTGTGAGTTCTGATGTCTTAGTGACTTAGTTCTTAGAAGCTCACGCCTTAGTTTGAAACA GATTCTCCACGGTGGTCCCCAAAACACTGTCTGCATATCCATAAGAATTGAGCGCTATGGGTGTTAACGTGCATGAGGATCAGTTTGCAG CAGCAAGTACAAAAGGAGAAGAGGAACATCCGTTGAATGAGTGTGTTTTGTACATAACTTCAGATACTTGTGAACATGCCTTATATTTGT >In-frame_ENST00000344921_ENST00000354749_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(amino acids)=619AA_start in transcript=1236_stop in transcript=3095 MRWRRRSATRTGTRAGDAHTVLSESNRNDEHCGNSNNKCEVIPESTSAVTNIPHVQMVAIQVSWNIIHQEVNTEPYNPFEERQGEISRIE KEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEM YTQKNDGKEKEHELHLDQSLEISNTLTNEKMKIEEYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLKKLGLISRD PAAYPDMESDIRSWELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNTVHPELLPESSGDDGQGLVTSASDVTGN HAALHRDPSVFSAGDSPGEAPSALLPGPPPGQPEATQLTGPKRAGQAALSERSPVADRKQPVPPGRAARSSQSPKKPFNSIIEHLSVVFP CYNSTELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKAEDV -------------------------------------------------------------- >In-frame_ENST00000263121_ENST00000355666_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(transcript)=4587nt_BP=1241nt CTGCGCACTGAGGGCGGCCTGGTCGTCGTCTGCGGCGGCGGCGGCGGCTGAGGAGCCCGGCTGAGGCGCCAGTACCCGGCCCGGTCCGCA TTTCGCCTTCCGGCTTCGGTTTCCCTCGGCCCAGCACGCCCCGGCCCCGCCCCAGCCCTCCTGATCCCTCGCAGCCCGGCTCCGGCCGCC CGCCTCTGCCGCCGCAATGATGATGATGGCGCTGAGCAAGACCTTCGGGCAGAAGCCCGTGAAGTTCCAGCTGGAGGACGACGGCGAGTT CTACATGATCGGCTCCGAGGTGGGAAACTACCTCCGTATGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACTCTGGAGGCGACTAGC CACTGTGGAAGAGAGGAAGAAAATAGTTGCATCGTCACATGGTAAAAAAACAAAACCTAACACTAAGGATCACGGATACACGACTCTAGC CACCAGTGTGACCCTGTTAAAAGCCTCGGAAGTGGAAGAGATTCTGGATGGCAACGATGAGAAGTACAAGGCTGTGTCCATCAGCACAGA GCCCCCCACCTACCTCAGGGAACAGAAGGCCAAGAGGAACAGCCAGTGGGTACCCACCCTGCCCAACAGCTCCCACCACTTAGATGCCGT GCCATGCTCCACAACCATCAACAGGAACCGCATGGGCCGAGACAAGAAGAGAACCTTCCCCCTTTGCTTTGATGACCATGACCCAGCTGT GATCCATGAGAACGCATCTCAGCCCGAGGTGCTGGTCCCCATCCGGCTGGACATGGAGATCGATGGGCAGAAGCTGCGAGACGCCTTCAC CTGGAACATGAATGAGAAGTTGATGACGCCTGAGATGTTTTCAGAAATCCTCTGTGACGATCTGGATTTGAACCCGCTGACGTTTGTGCC AGCCATCGCCTCTGCCATCAGACAGCAGATCGAGTCCTACCCCACGGACAGCATCCTGGAGGACCAGTCAGACCAGCGCGTCATCATCAA GCTGAACATCCATGTGGGAAACATTTCCCTGGTGGACCAGTTTGAGTGGGACATGTCAGAGAAGGAGAACTCACCAGAGAAGTTTGCCCT GAAGCTGTGCTCGGAGCTGGGGTTGGGCGGGGAGTTTGTCACCACCATCGCATACAGCATCCGGGGACAGCTGAGCTGGCATCAGAAGAC CTACGCCTTCAGGAGACTCTGACAGACGCTGAGATGGAGAAGAAGATCCGCGACCAGGACAGGAACACGAGCAGGTGATGCTCATACAGT CCTGAGTGAGTCTAACAGAAATGATGAGCACTGTGGAAATTCTAACAACAAATGTGAAGTAATTCCAGAAAGCACCAGTGCAGTAACAAA CATTCCACACGTGCAGATGGTTGCCATACAGGTATCTTGGAACATAATACACCAAGAAGTCAATACTGAGCCATATAATCCTTTTGAGGA ACGACAAGGGGAAATTTCACGGATTGAAAAGGAGCACCAAGTATTACAAGACCAACTTCAAGAAGTGTATGAAAATTATGAGCAGATAAA ACTTAAGGGCTTAGAAGAGACCAGGGACCTGGAAGAGAAGTTGAAAAGGCACTTAGAAGAAAACAAGATCTCAAAGACGGAATTAGATTG GTTCCTTCAAGATTTGGAAAGAGAAATTAAAAAATGGCAACAGGAAAAAAAAGAAATCCAAGAAAGACTAAAATCACTGAAGAAGAAAAT TAAAAAGGTTTCAAATGCCAGTGAAATGTATACCCAGAAAAATGATGGAAAGGAAAAGGAACATGAATTACATCTGGATCAGTCCCTTGA AATCAGCAACACACTTACAAATGAGAAAATGAAAATAGAAGAGTATATAAAGAAAGGGAAAGAGGATTATGAAGAGAGTCATCAGAGAGC TGTGGCTGCAGAGGTATCCGTACTTGAAAACTGGAAGGAGAGTGAAGTGTATAAGCTACAGATCATGGAGTCACAAGCAGAAGCCTTTCT GAAGAAGCTGGGGCTGATTAGCCGTGATCCTGCAGCATATCCTGACATGGAGTCTGATATACGTTCATGGGAATTGTTTCTTTCTAATGT TACAAAAGAAATTGAGAAAGCAAAGTCTCAGTTTGAAGAACAAATTAAGGCAATTAAAAATGGTTCTCGGCTCAGTGAACTTTCTAAAGT GCAGATTTCTGAGCTTTCATTTCCTGCCTGTAACACGGTTCATCCCGAGTTACTCCCTGAGTCTTCAGGCGACGATGGCCAAGGGCTTGT GACTTCTGCAAGCGACGTGACTGGAAACCACGCAGCACTTCACAGGGATCCTAGTGTGTTCTCTGCTGGTGATTCCCCAGGGGAGGCTCC TTCTGCGCTGTTGCCAGGGCCACCCCCTGGTCAGCCTGAAGCCACTCAGCTGACAGGGCCAAAACGGGCTGGCCAGGCAGCTCTGTCAGA ACGAAGCCCTGTGGCTGATCGGAAGCAGCCTGTTCCTCCAGGACGTGCTGCGCGTTCAAGCCAGTCTCCAAAAAAGCCGTTCAATAGTAT TATTGAGCACCTGTCAGTGGTATTCCCATGTTACAACAGCACTGAGCTTGCTGGTTTTATTAAAAAAGTGCGAAGCAAAAACAAGAACTC ACTCTCAGGATTGAGTATTGATGAAATTGTCCAAAGAGTGACAGAACACATTCTAGATGAACAGAAAAAGAAAAAGCCAAACCCAGGAAA GGACAAGAGGACTTATGAGCCCAGCTCTGCCACCCCCGTGACCAGGTCCTCCCAGGGCTCACCCTCGGTGGTTGTTGCACCATCACCCAA AACCAAGGGGCAGAAAGCAGAAGATGTCCCTGTGAGGATTGCACTGGGTGCAAGTTCCTGTGAAATATGCCACGAGGTGTTCAAATCAAA AAACGTGCGTGTGCTCAAATGTGGGCACAAGTATCACAAAGGGTGCTTTAAGCAGTGGCTTAAAGGGCAGAGCGCTTGCCCGGCCTGCCA GGGTCGTGATCTCCTGACAGAAGAGTCACCTTCTGGAAGAGGCTGGCCCAGTCAGAATCAGGAGCTGCCTTCCTGCTCTTCTAGGTAGTC ACACTTCACTAAAGTGTCATCCACCAGTGTGTTGAATCCGAAGAATGACAATTTTCTACCACTGGTGTAAAAAACAAACATTTGAAGACC CTTGTGCATTGTGTGTCACAAAGCTAAATACATGGAAATCGTTAATATCGCTGATATTAAGTAATTTCCCCACTCTGAGTGAATACTTTG ATGATTGCCAACAGTGGCTAATAAAATGACGGCTACCACACTCATGGGTCACTGGGGCTGCGCAGGGCTCTTTGAGGTGGGTGGCTTCTT TTGGAAAGTACTATGAACGTCTCGAAGCAGTATTCTAGTGATAAGAATTCTTAACATAGCCAAGCGCCCCACGTTTGTTCCCCACGTTTG TTCCCCTTTTCTGTTTGAAAAACCTGTTCTGGTAGCTCCACAAGAGAGATGATACTGACTTTTTAAATTTTTTACAAGAGTCTGTATTCC TGATATGCCTATATTTTTCCTCAAAGATTCTGCATTTTAAGGATGGGCATAAGCAAACTATATTTTAATAATTTATAGTTAATGTTAAAA TATTGGCTGATTTAGACCAAAAGATTCAAATCTCCTCTTTGTGAAATCCCATCTGCATTTGATTTTTTATTATTTTATGTTCCCCCGTTA GATTGTTTTAAGTGTTTGCTTTTCATCTTTTATAGATGTAATCTGATTTTCAAAAATCATTAACACTTTTTAATTAGTATCGACTAAGAC TTTTTCCCCCTGGAATCGAGGCTGTGTGTCCGTCATCCCAGCCCCCGGTTGGAGCCTGCTCTTTGAACTCCGCTGCCTTCCTTAGCAGCT TCTGTCCTCTTCTGTGAGTCAGTCAGCGAGTGCTTGGGATCCGCATCCAGCCGTGCTGAGCACACAACAGGCTGTGTGTGGAAATGGCCA CCACCATTCTCCTTCCCCACCCCACCACAAAAAGAGAAGCTGTGTCTTTAGACAACCCTGAGGTATCTGTGTTACAATCGTTCTGTGTTT GATATTTGTGTAAAGTATGCATGCAGTCTTGTACTGTGACCTAAGAACAAAACTGTAACTGCATTAGAAACCATGAAAAAATTAGATATT GTTTTGTGACTTTTAGACAGTGGTAAATATAGAACCATGAATTCTGGTCACATTCCATTTCTCTCCAACATGAAGGATCAAAAAATGTTT TTCAATGTGTTCTTTGTTCCACTGGAAACTTAGAGTCATGAGTTTATGAGCTGATTTGGTCACCTTCCTCTGCCTTTGTTCACTGTGAGT TCTGATGTCTTAGTGACTTAGTTCTTAGAAGCTCACGCCTTAGTTTGAAACAGATTCTCCACGGTGGTCCCCAAAACACTGTCTGCATAT CCATAAGAATTGAGCGCTATGGGTGTTAACGTGCATGAGGATCAGTTTGCAGCAGCAAGTACAAAAGGAGAAGAGGAACATCCGTTGAAT >In-frame_ENST00000263121_ENST00000355666_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(amino acids)=619AA_start in transcript=1198_stop in transcript=3057 MRWRRRSATRTGTRAGDAHTVLSESNRNDEHCGNSNNKCEVIPESTSAVTNIPHVQMVAIQVSWNIIHQEVNTEPYNPFEERQGEISRIE KEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEM YTQKNDGKEKEHELHLDQSLEISNTLTNEKMKIEEYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLKKLGLISRD PAAYPDMESDIRSWELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNTVHPELLPESSGDDGQGLVTSASDVTGN HAALHRDPSVFSAGDSPGEAPSALLPGPPPGQPEATQLTGPKRAGQAALSERSPVADRKQPVPPGRAARSSQSPKKPFNSIIEHLSVVFP CYNSTELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKAEDV -------------------------------------------------------------- >In-frame_ENST00000263121_ENST00000399017_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(transcript)=4596nt_BP=1241nt CTGCGCACTGAGGGCGGCCTGGTCGTCGTCTGCGGCGGCGGCGGCGGCTGAGGAGCCCGGCTGAGGCGCCAGTACCCGGCCCGGTCCGCA TTTCGCCTTCCGGCTTCGGTTTCCCTCGGCCCAGCACGCCCCGGCCCCGCCCCAGCCCTCCTGATCCCTCGCAGCCCGGCTCCGGCCGCC CGCCTCTGCCGCCGCAATGATGATGATGGCGCTGAGCAAGACCTTCGGGCAGAAGCCCGTGAAGTTCCAGCTGGAGGACGACGGCGAGTT CTACATGATCGGCTCCGAGGTGGGAAACTACCTCCGTATGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACTCTGGAGGCGACTAGC CACTGTGGAAGAGAGGAAGAAAATAGTTGCATCGTCACATGGTAAAAAAACAAAACCTAACACTAAGGATCACGGATACACGACTCTAGC CACCAGTGTGACCCTGTTAAAAGCCTCGGAAGTGGAAGAGATTCTGGATGGCAACGATGAGAAGTACAAGGCTGTGTCCATCAGCACAGA GCCCCCCACCTACCTCAGGGAACAGAAGGCCAAGAGGAACAGCCAGTGGGTACCCACCCTGCCCAACAGCTCCCACCACTTAGATGCCGT GCCATGCTCCACAACCATCAACAGGAACCGCATGGGCCGAGACAAGAAGAGAACCTTCCCCCTTTGCTTTGATGACCATGACCCAGCTGT GATCCATGAGAACGCATCTCAGCCCGAGGTGCTGGTCCCCATCCGGCTGGACATGGAGATCGATGGGCAGAAGCTGCGAGACGCCTTCAC CTGGAACATGAATGAGAAGTTGATGACGCCTGAGATGTTTTCAGAAATCCTCTGTGACGATCTGGATTTGAACCCGCTGACGTTTGTGCC AGCCATCGCCTCTGCCATCAGACAGCAGATCGAGTCCTACCCCACGGACAGCATCCTGGAGGACCAGTCAGACCAGCGCGTCATCATCAA GCTGAACATCCATGTGGGAAACATTTCCCTGGTGGACCAGTTTGAGTGGGACATGTCAGAGAAGGAGAACTCACCAGAGAAGTTTGCCCT GAAGCTGTGCTCGGAGCTGGGGTTGGGCGGGGAGTTTGTCACCACCATCGCATACAGCATCCGGGGACAGCTGAGCTGGCATCAGAAGAC CTACGCCTTCAGGAGACTCTGACAGACGCTGAGATGGAGAAGAAGATCCGCGACCAGGACAGGAACACGAGCAGGTGATGCTCATACAGT CCTGAGTGAGTCTAACAGAAATGATGAGCACTGTGGAAATTCTAACAACAAATGTGAAGTAATTCCAGAAAGCACCAGTGCAGTAACAAA CATTCCACACGTGCAGATGGTTGCCATACAGGTATCTTGGAACATAATACACCAAGAAGTCAATACTGAGCCATATAATCCTTTTGAGGA ACGACAAGGGGAAATTTCACGGATTGAAAAGGAGCACCAAGTATTACAAGACCAACTTCAAGAAGTGTATGAAAATTATGAGCAGATAAA ACTTAAGGGCTTAGAAGAGACCAGGGACCTGGAAGAGAAGTTGAAAAGGCACTTAGAAGAAAACAAGATCTCAAAGACGGAATTAGATTG GTTCCTTCAAGATTTGGAAAGAGAAATTAAAAAATGGCAACAGGAAAAAAAAGAAATCCAAGAAAGACTAAAATCACTGAAGAAGAAAAT TAAAAAGGTTTCAAATGCCAGTGAAATGTATACCCAGAAAAATGATGGAAAGGAAAAGGAACATGAATTACATCTGGATCAGTCCCTTGA AATCAGCAACACACTTACAAATGAGAAAATGAAAATAGAAGAGTATATAAAGAAAGGGAAAGAGGATTATGAAGAGAGTCATCAGAGAGC TGTGGCTGCAGAGGTATCCGTACTTGAAAACTGGAAGGAGAGTGAAGTGTATAAGCTACAGATCATGGAGTCACAAGCAGAAGCCTTTCT GAAGAAGCTGGGGCTGATTAGCCGTGATCCTGCAGCATATCCTGACATGGAGTCTGATATACGTTCATGGGAATTGTTTCTTTCTAATGT TACAAAAGAAATTGAGAAAGCAAAGTCTCAGTTTGAAGAACAAATTAAGGCAATTAAAAATGGTTCTCGGCTCAGTGAACTTTCTAAAGT GCAGATTTCTGAGCTTTCATTTCCTGCCTGTAACACGGTTCATCCCGAGTTACTCCCTGAGTCTTCAGGCGACGATGGCCAAGGGCTTGT GACTTCTGCAAGCGACGTGACTGGAAACCACGCAGCACTTCACAGGGATCCTAGTGTGTTCTCTGCTGGTGATTCCCCAGGGGAGGCTCC TTCTGCGCTGTTGCCAGGGCCACCCCCTGGTCAGCCTGAAGCCACTCAGCTGACAGGGCCAAAACGGGCTGGCCAGGCAGCTCTGTCAGA ACGAAGCCCTGTGGCTGATCGGAAGCAGCCTGTTCCTCCAGGACGTGCTGCGCGTTCAAGCCAGTCTCCAAAAAAGCCGTTCAATAGTAT TATTGAGCACCTGTCAGTGGTATTCCCATGTTACAACAGCACTGAGCTTGCTGGTTTTATTAAAAAAGTGCGAAGCAAAAACAAGAACTC ACTCTCAGGATTGAGTATTGATGAAATTGTCCAAAGAGTGACAGAACACATTCTAGATGAACAGAAAAAGAAAAAGCCAAACCCAGGAAA GGACAAGAGGACTTATGAGCCCAGCTCTGCCACCCCCGTGACCAGGTCCTCCCAGGGCTCACCCTCGGTGGTTGTTGCACCATCACCCAA AACCAAGGGGCAGAAAGCAGAAGATGTCCCTGTGAGGATTGCACTGGGTGCAAGTTCCTGTGAAATATGCCACGAGGTGTTCAAATCAAA AAACGTGCGTGTGCTCAAATGTGGGCACAAGTATCACAAAGGGTGCTTTAAGCAGTGGCTTAAAGGGCAGAGCGCTTGCCCGGCCTGCCA GGGTCGTGATCTCCTGACAGAAGAGTCACCTTCTGGAAGAGGCTGGCCCAGTCAGAATCAGGAGCTGCCTTCCTGCTCTTCTAGGTAGTC ACACTTCACTAAAGTGTCATCCACCAGTGTGTTGAATCCGAAGAATGACAATTTTCTACCACTGGTGTAAAAAACAAACATTTGAAGACC CTTGTGCATTGTGTGTCACAAAGCTAAATACATGGAAATCGTTAATATCGCTGATATTAAGTAATTTCCCCACTCTGAGTGAATACTTTG ATGATTGCCAACAGTGGCTAATAAAATGACGGCTACCACACTCATGGGTCACTGGGGCTGCGCAGGGCTCTTTGAGGTGGGTGGCTTCTT TTGGAAAGTACTATGAACGTCTCGAAGCAGTATTCTAGTGATAAGAATTCTTAACATAGCCAAGCGCCCCACGTTTGTTCCCCACGTTTG TTCCCCTTTTCTGTTTGAAAAACCTGTTCTGGTAGCTCCACAAGAGAGATGATACTGACTTTTTAAATTTTTTACAAGAGTCTGTATTCC TGATATGCCTATATTTTTCCTCAAAGATTCTGCATTTTAAGGATGGGCATAAGCAAACTATATTTTAATAATTTATAGTTAATGTTAAAA TATTGGCTGATTTAGACCAAAAGATTCAAATCTCCTCTTTGTGAAATCCCATCTGCATTTGATTTTTTATTATTTTATGTTCCCCCGTTA GATTGTTTTAAGTGTTTGCTTTTCATCTTTTATAGATGTAATCTGATTTTCAAAAATCATTAACACTTTTTAATTAGTATCGACTAAGAC TTTTTCCCCCTGGAATCGAGGCTGTGTGTCCGTCATCCCAGCCCCCGGTTGGAGCCTGCTCTTTGAACTCCGCTGCCTTCCTTAGCAGCT TCTGTCCTCTTCTGTGAGTCAGTCAGCGAGTGCTTGGGATCCGCATCCAGCCGTGCTGAGCACACAACAGGCTGTGTGTGGAAATGGCCA CCACCATTCTCCTTCCCCACCCCACCACAAAAAGAGAAGCTGTGTCTTTAGACAACCCTGAGGTATCTGTGTTACAATCGTTCTGTGTTT GATATTTGTGTAAAGTATGCATGCAGTCTTGTACTGTGACCTAAGAACAAAACTGTAACTGCATTAGAAACCATGAAAAAATTAGATATT GTTTTGTGACTTTTAGACAGTGGTAAATATAGAACCATGAATTCTGGTCACATTCCATTTCTCTCCAACATGAAGGATCAAAAAATGTTT TTCAATGTGTTCTTTGTTCCACTGGAAACTTAGAGTCATGAGTTTATGAGCTGATTTGGTCACCTTCCTCTGCCTTTGTTCACTGTGAGT TCTGATGTCTTAGTGACTTAGTTCTTAGAAGCTCACGCCTTAGTTTGAAACAGATTCTCCACGGTGGTCCCCAAAACACTGTCTGCATAT CCATAAGAATTGAGCGCTATGGGTGTTAACGTGCATGAGGATCAGTTTGCAGCAGCAAGTACAAAAGGAGAAGAGGAACATCCGTTGAAT GAGTGTGTTTTGTACATAACTTCAGATACTTGTGAACATGCCTTATATTTGTCCAACAACTGTCAGAATAAAGAACATTCTAAAATGAGA >In-frame_ENST00000263121_ENST00000399017_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(amino acids)=619AA_start in transcript=1198_stop in transcript=3057 MRWRRRSATRTGTRAGDAHTVLSESNRNDEHCGNSNNKCEVIPESTSAVTNIPHVQMVAIQVSWNIIHQEVNTEPYNPFEERQGEISRIE KEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEM YTQKNDGKEKEHELHLDQSLEISNTLTNEKMKIEEYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLKKLGLISRD PAAYPDMESDIRSWELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNTVHPELLPESSGDDGQGLVTSASDVTGN HAALHRDPSVFSAGDSPGEAPSALLPGPPPGQPEATQLTGPKRAGQAALSERSPVADRKQPVPPGRAARSSQSPKKPFNSIIEHLSVVFP CYNSTELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKAEDV -------------------------------------------------------------- >In-frame_ENST00000263121_ENST00000354749_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(transcript)=4596nt_BP=1241nt CTGCGCACTGAGGGCGGCCTGGTCGTCGTCTGCGGCGGCGGCGGCGGCTGAGGAGCCCGGCTGAGGCGCCAGTACCCGGCCCGGTCCGCA TTTCGCCTTCCGGCTTCGGTTTCCCTCGGCCCAGCACGCCCCGGCCCCGCCCCAGCCCTCCTGATCCCTCGCAGCCCGGCTCCGGCCGCC CGCCTCTGCCGCCGCAATGATGATGATGGCGCTGAGCAAGACCTTCGGGCAGAAGCCCGTGAAGTTCCAGCTGGAGGACGACGGCGAGTT CTACATGATCGGCTCCGAGGTGGGAAACTACCTCCGTATGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACTCTGGAGGCGACTAGC CACTGTGGAAGAGAGGAAGAAAATAGTTGCATCGTCACATGGTAAAAAAACAAAACCTAACACTAAGGATCACGGATACACGACTCTAGC CACCAGTGTGACCCTGTTAAAAGCCTCGGAAGTGGAAGAGATTCTGGATGGCAACGATGAGAAGTACAAGGCTGTGTCCATCAGCACAGA GCCCCCCACCTACCTCAGGGAACAGAAGGCCAAGAGGAACAGCCAGTGGGTACCCACCCTGCCCAACAGCTCCCACCACTTAGATGCCGT GCCATGCTCCACAACCATCAACAGGAACCGCATGGGCCGAGACAAGAAGAGAACCTTCCCCCTTTGCTTTGATGACCATGACCCAGCTGT GATCCATGAGAACGCATCTCAGCCCGAGGTGCTGGTCCCCATCCGGCTGGACATGGAGATCGATGGGCAGAAGCTGCGAGACGCCTTCAC CTGGAACATGAATGAGAAGTTGATGACGCCTGAGATGTTTTCAGAAATCCTCTGTGACGATCTGGATTTGAACCCGCTGACGTTTGTGCC AGCCATCGCCTCTGCCATCAGACAGCAGATCGAGTCCTACCCCACGGACAGCATCCTGGAGGACCAGTCAGACCAGCGCGTCATCATCAA GCTGAACATCCATGTGGGAAACATTTCCCTGGTGGACCAGTTTGAGTGGGACATGTCAGAGAAGGAGAACTCACCAGAGAAGTTTGCCCT GAAGCTGTGCTCGGAGCTGGGGTTGGGCGGGGAGTTTGTCACCACCATCGCATACAGCATCCGGGGACAGCTGAGCTGGCATCAGAAGAC CTACGCCTTCAGGAGACTCTGACAGACGCTGAGATGGAGAAGAAGATCCGCGACCAGGACAGGAACACGAGCAGGTGATGCTCATACAGT CCTGAGTGAGTCTAACAGAAATGATGAGCACTGTGGAAATTCTAACAACAAATGTGAAGTAATTCCAGAAAGCACCAGTGCAGTAACAAA CATTCCACACGTGCAGATGGTTGCCATACAGGTATCTTGGAACATAATACACCAAGAAGTCAATACTGAGCCATATAATCCTTTTGAGGA ACGACAAGGGGAAATTTCACGGATTGAAAAGGAGCACCAAGTATTACAAGACCAACTTCAAGAAGTGTATGAAAATTATGAGCAGATAAA ACTTAAGGGCTTAGAAGAGACCAGGGACCTGGAAGAGAAGTTGAAAAGGCACTTAGAAGAAAACAAGATCTCAAAGACGGAATTAGATTG GTTCCTTCAAGATTTGGAAAGAGAAATTAAAAAATGGCAACAGGAAAAAAAAGAAATCCAAGAAAGACTAAAATCACTGAAGAAGAAAAT TAAAAAGGTTTCAAATGCCAGTGAAATGTATACCCAGAAAAATGATGGAAAGGAAAAGGAACATGAATTACATCTGGATCAGTCCCTTGA AATCAGCAACACACTTACAAATGAGAAAATGAAAATAGAAGAGTATATAAAGAAAGGGAAAGAGGATTATGAAGAGAGTCATCAGAGAGC TGTGGCTGCAGAGGTATCCGTACTTGAAAACTGGAAGGAGAGTGAAGTGTATAAGCTACAGATCATGGAGTCACAAGCAGAAGCCTTTCT GAAGAAGCTGGGGCTGATTAGCCGTGATCCTGCAGCATATCCTGACATGGAGTCTGATATACGTTCATGGGAATTGTTTCTTTCTAATGT TACAAAAGAAATTGAGAAAGCAAAGTCTCAGTTTGAAGAACAAATTAAGGCAATTAAAAATGGTTCTCGGCTCAGTGAACTTTCTAAAGT GCAGATTTCTGAGCTTTCATTTCCTGCCTGTAACACGGTTCATCCCGAGTTACTCCCTGAGTCTTCAGGCGACGATGGCCAAGGGCTTGT GACTTCTGCAAGCGACGTGACTGGAAACCACGCAGCACTTCACAGGGATCCTAGTGTGTTCTCTGCTGGTGATTCCCCAGGGGAGGCTCC TTCTGCGCTGTTGCCAGGGCCACCCCCTGGTCAGCCTGAAGCCACTCAGCTGACAGGGCCAAAACGGGCTGGCCAGGCAGCTCTGTCAGA ACGAAGCCCTGTGGCTGATCGGAAGCAGCCTGTTCCTCCAGGACGTGCTGCGCGTTCAAGCCAGTCTCCAAAAAAGCCGTTCAATAGTAT TATTGAGCACCTGTCAGTGGTATTCCCATGTTACAACAGCACTGAGCTTGCTGGTTTTATTAAAAAAGTGCGAAGCAAAAACAAGAACTC ACTCTCAGGATTGAGTATTGATGAAATTGTCCAAAGAGTGACAGAACACATTCTAGATGAACAGAAAAAGAAAAAGCCAAACCCAGGAAA GGACAAGAGGACTTATGAGCCCAGCTCTGCCACCCCCGTGACCAGGTCCTCCCAGGGCTCACCCTCGGTGGTTGTTGCACCATCACCCAA AACCAAGGGGCAGAAAGCAGAAGATGTCCCTGTGAGGATTGCACTGGGTGCAAGTTCCTGTGAAATATGCCACGAGGTGTTCAAATCAAA AAACGTGCGTGTGCTCAAATGTGGGCACAAGTATCACAAAGGGTGCTTTAAGCAGTGGCTTAAAGGGCAGAGCGCTTGCCCGGCCTGCCA GGGTCGTGATCTCCTGACAGAAGAGTCACCTTCTGGAAGAGGCTGGCCCAGTCAGAATCAGGAGCTGCCTTCCTGCTCTTCTAGGTAGTC ACACTTCACTAAAGTGTCATCCACCAGTGTGTTGAATCCGAAGAATGACAATTTTCTACCACTGGTGTAAAAAACAAACATTTGAAGACC CTTGTGCATTGTGTGTCACAAAGCTAAATACATGGAAATCGTTAATATCGCTGATATTAAGTAATTTCCCCACTCTGAGTGAATACTTTG ATGATTGCCAACAGTGGCTAATAAAATGACGGCTACCACACTCATGGGTCACTGGGGCTGCGCAGGGCTCTTTGAGGTGGGTGGCTTCTT TTGGAAAGTACTATGAACGTCTCGAAGCAGTATTCTAGTGATAAGAATTCTTAACATAGCCAAGCGCCCCACGTTTGTTCCCCACGTTTG TTCCCCTTTTCTGTTTGAAAAACCTGTTCTGGTAGCTCCACAAGAGAGATGATACTGACTTTTTAAATTTTTTACAAGAGTCTGTATTCC TGATATGCCTATATTTTTCCTCAAAGATTCTGCATTTTAAGGATGGGCATAAGCAAACTATATTTTAATAATTTATAGTTAATGTTAAAA TATTGGCTGATTTAGACCAAAAGATTCAAATCTCCTCTTTGTGAAATCCCATCTGCATTTGATTTTTTATTATTTTATGTTCCCCCGTTA GATTGTTTTAAGTGTTTGCTTTTCATCTTTTATAGATGTAATCTGATTTTCAAAAATCATTAACACTTTTTAATTAGTATCGACTAAGAC TTTTTCCCCCTGGAATCGAGGCTGTGTGTCCGTCATCCCAGCCCCCGGTTGGAGCCTGCTCTTTGAACTCCGCTGCCTTCCTTAGCAGCT TCTGTCCTCTTCTGTGAGTCAGTCAGCGAGTGCTTGGGATCCGCATCCAGCCGTGCTGAGCACACAACAGGCTGTGTGTGGAAATGGCCA CCACCATTCTCCTTCCCCACCCCACCACAAAAAGAGAAGCTGTGTCTTTAGACAACCCTGAGGTATCTGTGTTACAATCGTTCTGTGTTT GATATTTGTGTAAAGTATGCATGCAGTCTTGTACTGTGACCTAAGAACAAAACTGTAACTGCATTAGAAACCATGAAAAAATTAGATATT GTTTTGTGACTTTTAGACAGTGGTAAATATAGAACCATGAATTCTGGTCACATTCCATTTCTCTCCAACATGAAGGATCAAAAAATGTTT TTCAATGTGTTCTTTGTTCCACTGGAAACTTAGAGTCATGAGTTTATGAGCTGATTTGGTCACCTTCCTCTGCCTTTGTTCACTGTGAGT TCTGATGTCTTAGTGACTTAGTTCTTAGAAGCTCACGCCTTAGTTTGAAACAGATTCTCCACGGTGGTCCCCAAAACACTGTCTGCATAT CCATAAGAATTGAGCGCTATGGGTGTTAACGTGCATGAGGATCAGTTTGCAGCAGCAAGTACAAAAGGAGAAGAGGAACATCCGTTGAAT GAGTGTGTTTTGTACATAACTTCAGATACTTGTGAACATGCCTTATATTTGTCCAACAACTGTCAGAATAAAGAACATTCTAAAATGAGA >In-frame_ENST00000263121_ENST00000354749_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(amino acids)=619AA_start in transcript=1198_stop in transcript=3057 MRWRRRSATRTGTRAGDAHTVLSESNRNDEHCGNSNNKCEVIPESTSAVTNIPHVQMVAIQVSWNIIHQEVNTEPYNPFEERQGEISRIE KEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEM YTQKNDGKEKEHELHLDQSLEISNTLTNEKMKIEEYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLKKLGLISRD PAAYPDMESDIRSWELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNTVHPELLPESSGDDGQGLVTSASDVTGN HAALHRDPSVFSAGDSPGEAPSALLPGPPPGQPEATQLTGPKRAGQAALSERSPVADRKQPVPPGRAARSSQSPKKPFNSIIEHLSVVFP CYNSTELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKAEDV -------------------------------------------------------------- >In-frame_ENST00000407422_ENST00000355666_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(transcript)=4540nt_BP=1194nt GGTCGTCGTCTGCGGCGGCGGCGGCGGCTGAGGAGCCCGGCTGAGGCGCCAGTACCCGGCCCGGTCCGCATTTCGCCTTCCGGCTTCGGT TTCCCTCGGCCCAGCACGCCCCGGCCCCGCCCCAGCCCTCCTGATCCCTCGCAGCCCGGCTCCGGCCGCCCGCCTCTGCCGCCGCAATGA TGATGATGGCGCTGAGCAAGACCTTCGGGCAGAAGCCCGTGAAGTTCCAGCTGGAGGACGACGGCGAGTTCTACATGATCGGCTCCGAGG TGGGAAACTACCTCCGTATGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACTCTGGAGGCGACTAGCCACTGTGGAAGAGAGGAAGA AAATAGTTGCATCGTCACATGATCACGGATACACGACTCTAGCCACCAGTGTGACCCTGTTAAAAGCCTCGGAAGTGGAAGAGATTCTGG ATGGCAACGATGAGAAGTACAAGGCTGTGTCCATCAGCACAGAGCCCCCCACCTACCTCAGGGAACAGAAGGCCAAGAGGAACAGCCAGT GGGTACCCACCCTGCCCAACAGCTCCCACCACTTAGATGCCGTGCCATGCTCCACAACCATCAACAGGAACCGCATGGGCCGAGACAAGA AGAGAACCTTCCCCCTTTGCTTTGATGACCATGACCCAGCTGTGATCCATGAGAACGCATCTCAGCCCGAGGTGCTGGTCCCCATCCGGC TGGACATGGAGATCGATGGGCAGAAGCTGCGAGACGCCTTCACCTGGAACATGAATGAGAAGTTGATGACGCCTGAGATGTTTTCAGAAA TCCTCTGTGACGATCTGGATTTGAACCCGCTGACGTTTGTGCCAGCCATCGCCTCTGCCATCAGACAGCAGATCGAGTCCTACCCCACGG ACAGCATCCTGGAGGACCAGTCAGACCAGCGCGTCATCATCAAGCTGAACATCCATGTGGGAAACATTTCCCTGGTGGACCAGTTTGAGT GGGACATGTCAGAGAAGGAGAACTCACCAGAGAAGTTTGCCCTGAAGCTGTGCTCGGAGCTGGGGTTGGGCGGGGAGTTTGTCACCACCA TCGCATACAGCATCCGGGGACAGCTGAGCTGGCATCAGAAGACCTACGCCTTCAGGAGACTCTGACAGACGCTGAGATGGAGAAGAAGAT CCGCGACCAGGACAGGAACACGAGCAGGTGATGCTCATACAGTCCTGAGTGAGTCTAACAGAAATGATGAGCACTGTGGAAATTCTAACA ACAAATGTGAAGTAATTCCAGAAAGCACCAGTGCAGTAACAAACATTCCACACGTGCAGATGGTTGCCATACAGGTATCTTGGAACATAA TACACCAAGAAGTCAATACTGAGCCATATAATCCTTTTGAGGAACGACAAGGGGAAATTTCACGGATTGAAAAGGAGCACCAAGTATTAC AAGACCAACTTCAAGAAGTGTATGAAAATTATGAGCAGATAAAACTTAAGGGCTTAGAAGAGACCAGGGACCTGGAAGAGAAGTTGAAAA GGCACTTAGAAGAAAACAAGATCTCAAAGACGGAATTAGATTGGTTCCTTCAAGATTTGGAAAGAGAAATTAAAAAATGGCAACAGGAAA AAAAAGAAATCCAAGAAAGACTAAAATCACTGAAGAAGAAAATTAAAAAGGTTTCAAATGCCAGTGAAATGTATACCCAGAAAAATGATG GAAAGGAAAAGGAACATGAATTACATCTGGATCAGTCCCTTGAAATCAGCAACACACTTACAAATGAGAAAATGAAAATAGAAGAGTATA TAAAGAAAGGGAAAGAGGATTATGAAGAGAGTCATCAGAGAGCTGTGGCTGCAGAGGTATCCGTACTTGAAAACTGGAAGGAGAGTGAAG TGTATAAGCTACAGATCATGGAGTCACAAGCAGAAGCCTTTCTGAAGAAGCTGGGGCTGATTAGCCGTGATCCTGCAGCATATCCTGACA TGGAGTCTGATATACGTTCATGGGAATTGTTTCTTTCTAATGTTACAAAAGAAATTGAGAAAGCAAAGTCTCAGTTTGAAGAACAAATTA AGGCAATTAAAAATGGTTCTCGGCTCAGTGAACTTTCTAAAGTGCAGATTTCTGAGCTTTCATTTCCTGCCTGTAACACGGTTCATCCCG AGTTACTCCCTGAGTCTTCAGGCGACGATGGCCAAGGGCTTGTGACTTCTGCAAGCGACGTGACTGGAAACCACGCAGCACTTCACAGGG ATCCTAGTGTGTTCTCTGCTGGTGATTCCCCAGGGGAGGCTCCTTCTGCGCTGTTGCCAGGGCCACCCCCTGGTCAGCCTGAAGCCACTC AGCTGACAGGGCCAAAACGGGCTGGCCAGGCAGCTCTGTCAGAACGAAGCCCTGTGGCTGATCGGAAGCAGCCTGTTCCTCCAGGACGTG CTGCGCGTTCAAGCCAGTCTCCAAAAAAGCCGTTCAATAGTATTATTGAGCACCTGTCAGTGGTATTCCCATGTTACAACAGCACTGAGC TTGCTGGTTTTATTAAAAAAGTGCGAAGCAAAAACAAGAACTCACTCTCAGGATTGAGTATTGATGAAATTGTCCAAAGAGTGACAGAAC ACATTCTAGATGAACAGAAAAAGAAAAAGCCAAACCCAGGAAAGGACAAGAGGACTTATGAGCCCAGCTCTGCCACCCCCGTGACCAGGT CCTCCCAGGGCTCACCCTCGGTGGTTGTTGCACCATCACCCAAAACCAAGGGGCAGAAAGCAGAAGATGTCCCTGTGAGGATTGCACTGG GTGCAAGTTCCTGTGAAATATGCCACGAGGTGTTCAAATCAAAAAACGTGCGTGTGCTCAAATGTGGGCACAAGTATCACAAAGGGTGCT TTAAGCAGTGGCTTAAAGGGCAGAGCGCTTGCCCGGCCTGCCAGGGTCGTGATCTCCTGACAGAAGAGTCACCTTCTGGAAGAGGCTGGC CCAGTCAGAATCAGGAGCTGCCTTCCTGCTCTTCTAGGTAGTCACACTTCACTAAAGTGTCATCCACCAGTGTGTTGAATCCGAAGAATG ACAATTTTCTACCACTGGTGTAAAAAACAAACATTTGAAGACCCTTGTGCATTGTGTGTCACAAAGCTAAATACATGGAAATCGTTAATA TCGCTGATATTAAGTAATTTCCCCACTCTGAGTGAATACTTTGATGATTGCCAACAGTGGCTAATAAAATGACGGCTACCACACTCATGG GTCACTGGGGCTGCGCAGGGCTCTTTGAGGTGGGTGGCTTCTTTTGGAAAGTACTATGAACGTCTCGAAGCAGTATTCTAGTGATAAGAA TTCTTAACATAGCCAAGCGCCCCACGTTTGTTCCCCACGTTTGTTCCCCTTTTCTGTTTGAAAAACCTGTTCTGGTAGCTCCACAAGAGA GATGATACTGACTTTTTAAATTTTTTACAAGAGTCTGTATTCCTGATATGCCTATATTTTTCCTCAAAGATTCTGCATTTTAAGGATGGG CATAAGCAAACTATATTTTAATAATTTATAGTTAATGTTAAAATATTGGCTGATTTAGACCAAAAGATTCAAATCTCCTCTTTGTGAAAT CCCATCTGCATTTGATTTTTTATTATTTTATGTTCCCCCGTTAGATTGTTTTAAGTGTTTGCTTTTCATCTTTTATAGATGTAATCTGAT TTTCAAAAATCATTAACACTTTTTAATTAGTATCGACTAAGACTTTTTCCCCCTGGAATCGAGGCTGTGTGTCCGTCATCCCAGCCCCCG GTTGGAGCCTGCTCTTTGAACTCCGCTGCCTTCCTTAGCAGCTTCTGTCCTCTTCTGTGAGTCAGTCAGCGAGTGCTTGGGATCCGCATC CAGCCGTGCTGAGCACACAACAGGCTGTGTGTGGAAATGGCCACCACCATTCTCCTTCCCCACCCCACCACAAAAAGAGAAGCTGTGTCT TTAGACAACCCTGAGGTATCTGTGTTACAATCGTTCTGTGTTTGATATTTGTGTAAAGTATGCATGCAGTCTTGTACTGTGACCTAAGAA CAAAACTGTAACTGCATTAGAAACCATGAAAAAATTAGATATTGTTTTGTGACTTTTAGACAGTGGTAAATATAGAACCATGAATTCTGG TCACATTCCATTTCTCTCCAACATGAAGGATCAAAAAATGTTTTTCAATGTGTTCTTTGTTCCACTGGAAACTTAGAGTCATGAGTTTAT GAGCTGATTTGGTCACCTTCCTCTGCCTTTGTTCACTGTGAGTTCTGATGTCTTAGTGACTTAGTTCTTAGAAGCTCACGCCTTAGTTTG AAACAGATTCTCCACGGTGGTCCCCAAAACACTGTCTGCATATCCATAAGAATTGAGCGCTATGGGTGTTAACGTGCATGAGGATCAGTT TGCAGCAGCAAGTACAAAAGGAGAAGAGGAACATCCGTTGAATGAGTGTGTTTTGTACATAACTTCAGATACTTGTGAACATGCCTTATA >In-frame_ENST00000407422_ENST00000355666_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(amino acids)=619AA_start in transcript=1151_stop in transcript=3010 MRWRRRSATRTGTRAGDAHTVLSESNRNDEHCGNSNNKCEVIPESTSAVTNIPHVQMVAIQVSWNIIHQEVNTEPYNPFEERQGEISRIE KEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEM YTQKNDGKEKEHELHLDQSLEISNTLTNEKMKIEEYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLKKLGLISRD PAAYPDMESDIRSWELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNTVHPELLPESSGDDGQGLVTSASDVTGN HAALHRDPSVFSAGDSPGEAPSALLPGPPPGQPEATQLTGPKRAGQAALSERSPVADRKQPVPPGRAARSSQSPKKPFNSIIEHLSVVFP CYNSTELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKAEDV -------------------------------------------------------------- >In-frame_ENST00000407422_ENST00000399017_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(transcript)=4549nt_BP=1194nt GGTCGTCGTCTGCGGCGGCGGCGGCGGCTGAGGAGCCCGGCTGAGGCGCCAGTACCCGGCCCGGTCCGCATTTCGCCTTCCGGCTTCGGT TTCCCTCGGCCCAGCACGCCCCGGCCCCGCCCCAGCCCTCCTGATCCCTCGCAGCCCGGCTCCGGCCGCCCGCCTCTGCCGCCGCAATGA TGATGATGGCGCTGAGCAAGACCTTCGGGCAGAAGCCCGTGAAGTTCCAGCTGGAGGACGACGGCGAGTTCTACATGATCGGCTCCGAGG TGGGAAACTACCTCCGTATGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACTCTGGAGGCGACTAGCCACTGTGGAAGAGAGGAAGA AAATAGTTGCATCGTCACATGATCACGGATACACGACTCTAGCCACCAGTGTGACCCTGTTAAAAGCCTCGGAAGTGGAAGAGATTCTGG ATGGCAACGATGAGAAGTACAAGGCTGTGTCCATCAGCACAGAGCCCCCCACCTACCTCAGGGAACAGAAGGCCAAGAGGAACAGCCAGT GGGTACCCACCCTGCCCAACAGCTCCCACCACTTAGATGCCGTGCCATGCTCCACAACCATCAACAGGAACCGCATGGGCCGAGACAAGA AGAGAACCTTCCCCCTTTGCTTTGATGACCATGACCCAGCTGTGATCCATGAGAACGCATCTCAGCCCGAGGTGCTGGTCCCCATCCGGC TGGACATGGAGATCGATGGGCAGAAGCTGCGAGACGCCTTCACCTGGAACATGAATGAGAAGTTGATGACGCCTGAGATGTTTTCAGAAA TCCTCTGTGACGATCTGGATTTGAACCCGCTGACGTTTGTGCCAGCCATCGCCTCTGCCATCAGACAGCAGATCGAGTCCTACCCCACGG ACAGCATCCTGGAGGACCAGTCAGACCAGCGCGTCATCATCAAGCTGAACATCCATGTGGGAAACATTTCCCTGGTGGACCAGTTTGAGT GGGACATGTCAGAGAAGGAGAACTCACCAGAGAAGTTTGCCCTGAAGCTGTGCTCGGAGCTGGGGTTGGGCGGGGAGTTTGTCACCACCA TCGCATACAGCATCCGGGGACAGCTGAGCTGGCATCAGAAGACCTACGCCTTCAGGAGACTCTGACAGACGCTGAGATGGAGAAGAAGAT CCGCGACCAGGACAGGAACACGAGCAGGTGATGCTCATACAGTCCTGAGTGAGTCTAACAGAAATGATGAGCACTGTGGAAATTCTAACA ACAAATGTGAAGTAATTCCAGAAAGCACCAGTGCAGTAACAAACATTCCACACGTGCAGATGGTTGCCATACAGGTATCTTGGAACATAA TACACCAAGAAGTCAATACTGAGCCATATAATCCTTTTGAGGAACGACAAGGGGAAATTTCACGGATTGAAAAGGAGCACCAAGTATTAC AAGACCAACTTCAAGAAGTGTATGAAAATTATGAGCAGATAAAACTTAAGGGCTTAGAAGAGACCAGGGACCTGGAAGAGAAGTTGAAAA GGCACTTAGAAGAAAACAAGATCTCAAAGACGGAATTAGATTGGTTCCTTCAAGATTTGGAAAGAGAAATTAAAAAATGGCAACAGGAAA AAAAAGAAATCCAAGAAAGACTAAAATCACTGAAGAAGAAAATTAAAAAGGTTTCAAATGCCAGTGAAATGTATACCCAGAAAAATGATG GAAAGGAAAAGGAACATGAATTACATCTGGATCAGTCCCTTGAAATCAGCAACACACTTACAAATGAGAAAATGAAAATAGAAGAGTATA TAAAGAAAGGGAAAGAGGATTATGAAGAGAGTCATCAGAGAGCTGTGGCTGCAGAGGTATCCGTACTTGAAAACTGGAAGGAGAGTGAAG TGTATAAGCTACAGATCATGGAGTCACAAGCAGAAGCCTTTCTGAAGAAGCTGGGGCTGATTAGCCGTGATCCTGCAGCATATCCTGACA TGGAGTCTGATATACGTTCATGGGAATTGTTTCTTTCTAATGTTACAAAAGAAATTGAGAAAGCAAAGTCTCAGTTTGAAGAACAAATTA AGGCAATTAAAAATGGTTCTCGGCTCAGTGAACTTTCTAAAGTGCAGATTTCTGAGCTTTCATTTCCTGCCTGTAACACGGTTCATCCCG AGTTACTCCCTGAGTCTTCAGGCGACGATGGCCAAGGGCTTGTGACTTCTGCAAGCGACGTGACTGGAAACCACGCAGCACTTCACAGGG ATCCTAGTGTGTTCTCTGCTGGTGATTCCCCAGGGGAGGCTCCTTCTGCGCTGTTGCCAGGGCCACCCCCTGGTCAGCCTGAAGCCACTC AGCTGACAGGGCCAAAACGGGCTGGCCAGGCAGCTCTGTCAGAACGAAGCCCTGTGGCTGATCGGAAGCAGCCTGTTCCTCCAGGACGTG CTGCGCGTTCAAGCCAGTCTCCAAAAAAGCCGTTCAATAGTATTATTGAGCACCTGTCAGTGGTATTCCCATGTTACAACAGCACTGAGC TTGCTGGTTTTATTAAAAAAGTGCGAAGCAAAAACAAGAACTCACTCTCAGGATTGAGTATTGATGAAATTGTCCAAAGAGTGACAGAAC ACATTCTAGATGAACAGAAAAAGAAAAAGCCAAACCCAGGAAAGGACAAGAGGACTTATGAGCCCAGCTCTGCCACCCCCGTGACCAGGT CCTCCCAGGGCTCACCCTCGGTGGTTGTTGCACCATCACCCAAAACCAAGGGGCAGAAAGCAGAAGATGTCCCTGTGAGGATTGCACTGG GTGCAAGTTCCTGTGAAATATGCCACGAGGTGTTCAAATCAAAAAACGTGCGTGTGCTCAAATGTGGGCACAAGTATCACAAAGGGTGCT TTAAGCAGTGGCTTAAAGGGCAGAGCGCTTGCCCGGCCTGCCAGGGTCGTGATCTCCTGACAGAAGAGTCACCTTCTGGAAGAGGCTGGC CCAGTCAGAATCAGGAGCTGCCTTCCTGCTCTTCTAGGTAGTCACACTTCACTAAAGTGTCATCCACCAGTGTGTTGAATCCGAAGAATG ACAATTTTCTACCACTGGTGTAAAAAACAAACATTTGAAGACCCTTGTGCATTGTGTGTCACAAAGCTAAATACATGGAAATCGTTAATA TCGCTGATATTAAGTAATTTCCCCACTCTGAGTGAATACTTTGATGATTGCCAACAGTGGCTAATAAAATGACGGCTACCACACTCATGG GTCACTGGGGCTGCGCAGGGCTCTTTGAGGTGGGTGGCTTCTTTTGGAAAGTACTATGAACGTCTCGAAGCAGTATTCTAGTGATAAGAA TTCTTAACATAGCCAAGCGCCCCACGTTTGTTCCCCACGTTTGTTCCCCTTTTCTGTTTGAAAAACCTGTTCTGGTAGCTCCACAAGAGA GATGATACTGACTTTTTAAATTTTTTACAAGAGTCTGTATTCCTGATATGCCTATATTTTTCCTCAAAGATTCTGCATTTTAAGGATGGG CATAAGCAAACTATATTTTAATAATTTATAGTTAATGTTAAAATATTGGCTGATTTAGACCAAAAGATTCAAATCTCCTCTTTGTGAAAT CCCATCTGCATTTGATTTTTTATTATTTTATGTTCCCCCGTTAGATTGTTTTAAGTGTTTGCTTTTCATCTTTTATAGATGTAATCTGAT TTTCAAAAATCATTAACACTTTTTAATTAGTATCGACTAAGACTTTTTCCCCCTGGAATCGAGGCTGTGTGTCCGTCATCCCAGCCCCCG GTTGGAGCCTGCTCTTTGAACTCCGCTGCCTTCCTTAGCAGCTTCTGTCCTCTTCTGTGAGTCAGTCAGCGAGTGCTTGGGATCCGCATC CAGCCGTGCTGAGCACACAACAGGCTGTGTGTGGAAATGGCCACCACCATTCTCCTTCCCCACCCCACCACAAAAAGAGAAGCTGTGTCT TTAGACAACCCTGAGGTATCTGTGTTACAATCGTTCTGTGTTTGATATTTGTGTAAAGTATGCATGCAGTCTTGTACTGTGACCTAAGAA CAAAACTGTAACTGCATTAGAAACCATGAAAAAATTAGATATTGTTTTGTGACTTTTAGACAGTGGTAAATATAGAACCATGAATTCTGG TCACATTCCATTTCTCTCCAACATGAAGGATCAAAAAATGTTTTTCAATGTGTTCTTTGTTCCACTGGAAACTTAGAGTCATGAGTTTAT GAGCTGATTTGGTCACCTTCCTCTGCCTTTGTTCACTGTGAGTTCTGATGTCTTAGTGACTTAGTTCTTAGAAGCTCACGCCTTAGTTTG AAACAGATTCTCCACGGTGGTCCCCAAAACACTGTCTGCATATCCATAAGAATTGAGCGCTATGGGTGTTAACGTGCATGAGGATCAGTT TGCAGCAGCAAGTACAAAAGGAGAAGAGGAACATCCGTTGAATGAGTGTGTTTTGTACATAACTTCAGATACTTGTGAACATGCCTTATA >In-frame_ENST00000407422_ENST00000399017_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(amino acids)=619AA_start in transcript=1151_stop in transcript=3010 MRWRRRSATRTGTRAGDAHTVLSESNRNDEHCGNSNNKCEVIPESTSAVTNIPHVQMVAIQVSWNIIHQEVNTEPYNPFEERQGEISRIE KEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEM YTQKNDGKEKEHELHLDQSLEISNTLTNEKMKIEEYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLKKLGLISRD PAAYPDMESDIRSWELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNTVHPELLPESSGDDGQGLVTSASDVTGN HAALHRDPSVFSAGDSPGEAPSALLPGPPPGQPEATQLTGPKRAGQAALSERSPVADRKQPVPPGRAARSSQSPKKPFNSIIEHLSVVFP CYNSTELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKAEDV -------------------------------------------------------------- >In-frame_ENST00000407422_ENST00000354749_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(transcript)=4549nt_BP=1194nt GGTCGTCGTCTGCGGCGGCGGCGGCGGCTGAGGAGCCCGGCTGAGGCGCCAGTACCCGGCCCGGTCCGCATTTCGCCTTCCGGCTTCGGT TTCCCTCGGCCCAGCACGCCCCGGCCCCGCCCCAGCCCTCCTGATCCCTCGCAGCCCGGCTCCGGCCGCCCGCCTCTGCCGCCGCAATGA TGATGATGGCGCTGAGCAAGACCTTCGGGCAGAAGCCCGTGAAGTTCCAGCTGGAGGACGACGGCGAGTTCTACATGATCGGCTCCGAGG TGGGAAACTACCTCCGTATGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACTCTGGAGGCGACTAGCCACTGTGGAAGAGAGGAAGA AAATAGTTGCATCGTCACATGATCACGGATACACGACTCTAGCCACCAGTGTGACCCTGTTAAAAGCCTCGGAAGTGGAAGAGATTCTGG ATGGCAACGATGAGAAGTACAAGGCTGTGTCCATCAGCACAGAGCCCCCCACCTACCTCAGGGAACAGAAGGCCAAGAGGAACAGCCAGT GGGTACCCACCCTGCCCAACAGCTCCCACCACTTAGATGCCGTGCCATGCTCCACAACCATCAACAGGAACCGCATGGGCCGAGACAAGA AGAGAACCTTCCCCCTTTGCTTTGATGACCATGACCCAGCTGTGATCCATGAGAACGCATCTCAGCCCGAGGTGCTGGTCCCCATCCGGC TGGACATGGAGATCGATGGGCAGAAGCTGCGAGACGCCTTCACCTGGAACATGAATGAGAAGTTGATGACGCCTGAGATGTTTTCAGAAA TCCTCTGTGACGATCTGGATTTGAACCCGCTGACGTTTGTGCCAGCCATCGCCTCTGCCATCAGACAGCAGATCGAGTCCTACCCCACGG ACAGCATCCTGGAGGACCAGTCAGACCAGCGCGTCATCATCAAGCTGAACATCCATGTGGGAAACATTTCCCTGGTGGACCAGTTTGAGT GGGACATGTCAGAGAAGGAGAACTCACCAGAGAAGTTTGCCCTGAAGCTGTGCTCGGAGCTGGGGTTGGGCGGGGAGTTTGTCACCACCA TCGCATACAGCATCCGGGGACAGCTGAGCTGGCATCAGAAGACCTACGCCTTCAGGAGACTCTGACAGACGCTGAGATGGAGAAGAAGAT CCGCGACCAGGACAGGAACACGAGCAGGTGATGCTCATACAGTCCTGAGTGAGTCTAACAGAAATGATGAGCACTGTGGAAATTCTAACA ACAAATGTGAAGTAATTCCAGAAAGCACCAGTGCAGTAACAAACATTCCACACGTGCAGATGGTTGCCATACAGGTATCTTGGAACATAA TACACCAAGAAGTCAATACTGAGCCATATAATCCTTTTGAGGAACGACAAGGGGAAATTTCACGGATTGAAAAGGAGCACCAAGTATTAC AAGACCAACTTCAAGAAGTGTATGAAAATTATGAGCAGATAAAACTTAAGGGCTTAGAAGAGACCAGGGACCTGGAAGAGAAGTTGAAAA GGCACTTAGAAGAAAACAAGATCTCAAAGACGGAATTAGATTGGTTCCTTCAAGATTTGGAAAGAGAAATTAAAAAATGGCAACAGGAAA AAAAAGAAATCCAAGAAAGACTAAAATCACTGAAGAAGAAAATTAAAAAGGTTTCAAATGCCAGTGAAATGTATACCCAGAAAAATGATG GAAAGGAAAAGGAACATGAATTACATCTGGATCAGTCCCTTGAAATCAGCAACACACTTACAAATGAGAAAATGAAAATAGAAGAGTATA TAAAGAAAGGGAAAGAGGATTATGAAGAGAGTCATCAGAGAGCTGTGGCTGCAGAGGTATCCGTACTTGAAAACTGGAAGGAGAGTGAAG TGTATAAGCTACAGATCATGGAGTCACAAGCAGAAGCCTTTCTGAAGAAGCTGGGGCTGATTAGCCGTGATCCTGCAGCATATCCTGACA TGGAGTCTGATATACGTTCATGGGAATTGTTTCTTTCTAATGTTACAAAAGAAATTGAGAAAGCAAAGTCTCAGTTTGAAGAACAAATTA AGGCAATTAAAAATGGTTCTCGGCTCAGTGAACTTTCTAAAGTGCAGATTTCTGAGCTTTCATTTCCTGCCTGTAACACGGTTCATCCCG AGTTACTCCCTGAGTCTTCAGGCGACGATGGCCAAGGGCTTGTGACTTCTGCAAGCGACGTGACTGGAAACCACGCAGCACTTCACAGGG ATCCTAGTGTGTTCTCTGCTGGTGATTCCCCAGGGGAGGCTCCTTCTGCGCTGTTGCCAGGGCCACCCCCTGGTCAGCCTGAAGCCACTC AGCTGACAGGGCCAAAACGGGCTGGCCAGGCAGCTCTGTCAGAACGAAGCCCTGTGGCTGATCGGAAGCAGCCTGTTCCTCCAGGACGTG CTGCGCGTTCAAGCCAGTCTCCAAAAAAGCCGTTCAATAGTATTATTGAGCACCTGTCAGTGGTATTCCCATGTTACAACAGCACTGAGC TTGCTGGTTTTATTAAAAAAGTGCGAAGCAAAAACAAGAACTCACTCTCAGGATTGAGTATTGATGAAATTGTCCAAAGAGTGACAGAAC ACATTCTAGATGAACAGAAAAAGAAAAAGCCAAACCCAGGAAAGGACAAGAGGACTTATGAGCCCAGCTCTGCCACCCCCGTGACCAGGT CCTCCCAGGGCTCACCCTCGGTGGTTGTTGCACCATCACCCAAAACCAAGGGGCAGAAAGCAGAAGATGTCCCTGTGAGGATTGCACTGG GTGCAAGTTCCTGTGAAATATGCCACGAGGTGTTCAAATCAAAAAACGTGCGTGTGCTCAAATGTGGGCACAAGTATCACAAAGGGTGCT TTAAGCAGTGGCTTAAAGGGCAGAGCGCTTGCCCGGCCTGCCAGGGTCGTGATCTCCTGACAGAAGAGTCACCTTCTGGAAGAGGCTGGC CCAGTCAGAATCAGGAGCTGCCTTCCTGCTCTTCTAGGTAGTCACACTTCACTAAAGTGTCATCCACCAGTGTGTTGAATCCGAAGAATG ACAATTTTCTACCACTGGTGTAAAAAACAAACATTTGAAGACCCTTGTGCATTGTGTGTCACAAAGCTAAATACATGGAAATCGTTAATA TCGCTGATATTAAGTAATTTCCCCACTCTGAGTGAATACTTTGATGATTGCCAACAGTGGCTAATAAAATGACGGCTACCACACTCATGG GTCACTGGGGCTGCGCAGGGCTCTTTGAGGTGGGTGGCTTCTTTTGGAAAGTACTATGAACGTCTCGAAGCAGTATTCTAGTGATAAGAA TTCTTAACATAGCCAAGCGCCCCACGTTTGTTCCCCACGTTTGTTCCCCTTTTCTGTTTGAAAAACCTGTTCTGGTAGCTCCACAAGAGA GATGATACTGACTTTTTAAATTTTTTACAAGAGTCTGTATTCCTGATATGCCTATATTTTTCCTCAAAGATTCTGCATTTTAAGGATGGG CATAAGCAAACTATATTTTAATAATTTATAGTTAATGTTAAAATATTGGCTGATTTAGACCAAAAGATTCAAATCTCCTCTTTGTGAAAT CCCATCTGCATTTGATTTTTTATTATTTTATGTTCCCCCGTTAGATTGTTTTAAGTGTTTGCTTTTCATCTTTTATAGATGTAATCTGAT TTTCAAAAATCATTAACACTTTTTAATTAGTATCGACTAAGACTTTTTCCCCCTGGAATCGAGGCTGTGTGTCCGTCATCCCAGCCCCCG GTTGGAGCCTGCTCTTTGAACTCCGCTGCCTTCCTTAGCAGCTTCTGTCCTCTTCTGTGAGTCAGTCAGCGAGTGCTTGGGATCCGCATC CAGCCGTGCTGAGCACACAACAGGCTGTGTGTGGAAATGGCCACCACCATTCTCCTTCCCCACCCCACCACAAAAAGAGAAGCTGTGTCT TTAGACAACCCTGAGGTATCTGTGTTACAATCGTTCTGTGTTTGATATTTGTGTAAAGTATGCATGCAGTCTTGTACTGTGACCTAAGAA CAAAACTGTAACTGCATTAGAAACCATGAAAAAATTAGATATTGTTTTGTGACTTTTAGACAGTGGTAAATATAGAACCATGAATTCTGG TCACATTCCATTTCTCTCCAACATGAAGGATCAAAAAATGTTTTTCAATGTGTTCTTTGTTCCACTGGAAACTTAGAGTCATGAGTTTAT GAGCTGATTTGGTCACCTTCCTCTGCCTTTGTTCACTGTGAGTTCTGATGTCTTAGTGACTTAGTTCTTAGAAGCTCACGCCTTAGTTTG AAACAGATTCTCCACGGTGGTCCCCAAAACACTGTCTGCATATCCATAAGAATTGAGCGCTATGGGTGTTAACGTGCATGAGGATCAGTT TGCAGCAGCAAGTACAAAAGGAGAAGAGGAACATCCGTTGAATGAGTGTGTTTTGTACATAACTTCAGATACTTGTGAACATGCCTTATA >In-frame_ENST00000407422_ENST00000354749_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(amino acids)=619AA_start in transcript=1151_stop in transcript=3010 MRWRRRSATRTGTRAGDAHTVLSESNRNDEHCGNSNNKCEVIPESTSAVTNIPHVQMVAIQVSWNIIHQEVNTEPYNPFEERQGEISRIE KEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEM YTQKNDGKEKEHELHLDQSLEISNTLTNEKMKIEEYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLKKLGLISRD PAAYPDMESDIRSWELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNTVHPELLPESSGDDGQGLVTSASDVTGN HAALHRDPSVFSAGDSPGEAPSALLPGPPPGQPEATQLTGPKRAGQAALSERSPVADRKQPVPPGRAARSSQSPKKPFNSIIEHLSVVFP CYNSTELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKAEDV -------------------------------------------------------------- >In-frame_ENST00000407082_ENST00000355666_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(transcript)=4412nt_BP=1066nt GCGGCGGCGGCTGAGGAGCCCGGCTGAGGCGCCAGTACCCGGCCCGGTCCGCATTTCGCCTTCCGGCTTCGGTTTCCCTCGGCCCAGCAC GCCCCGGCCCCGCCCCAGCCCTCCTGATCCCTCGCAGCCCGGCTCCGGCCGCCCGCCTCTGCCGCCGCAATGATGATGATGGCGCTGAGC AAGACCTTCGGGCAGAAGCCCGTGAAGTTCCAGCTGGAGGACGACGGCGAGTTCTACATGATCGGCTCCGAGGTGGGAAACTACCTCCGT ATGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACTCTGGAGGCGACTAGCCACTGTGGAAGAGAGGAAGAAAATAGTTGCATCGTCA CATGGTAAAAAAACAAAACCTAACACTAAGGATCACGGATACACGACTCTAGCCACCAGTGTGACCCTGTTAAAAGCCTCGGAAGTGGAA GAGATTCTGGATGGCAACGATGAGAAGTACAAGGCTGTGTCCATCAGCACAGAGCCCCCCACCTACCTCAGCTTTGATGACCATGACCCA GCTGTGATCCATGAGAACGCATCTCAGCCCGAGGTGCTGGTCCCCATCCGGCTGGACATGGAGATCGATGGGCAGAAGCTGCGAGACGCC TTCACCTGGAACATGAATGAGAAGTTGATGACGCCTGAGATGTTTTCAGAAATCCTCTGTGACGATCTGGATTTGAACCCGCTGACGTTT GTGCCAGCCATCGCCTCTGCCATCAGACAGCAGATCGAGTCCTACCCCACGGACAGCATCCTGGAGGACCAGTCAGACCAGCGCGTCATC ATCAAGCTGAACATCCATGTGGGAAACATTTCCCTGGTGGACCAGTTTGAGTGGGACATGTCAGAGAAGGAGAACTCACCAGAGAAGTTT GCCCTGAAGCTGTGCTCGGAGCTGGGGTTGGGCGGGGAGTTTGTCACCACCATCGCATACAGCATCCGGGGACAGCTGAGCTGGCATCAG AAGACCTACGCCTTCAGGAGACTCTGACAGACGCTGAGATGGAGAAGAAGATCCGCGACCAGGACAGGAACACGAGCAGGTGATGCTCAT ACAGTCCTGAGTGAGTCTAACAGAAATGATGAGCACTGTGGAAATTCTAACAACAAATGTGAAGTAATTCCAGAAAGCACCAGTGCAGTA ACAAACATTCCACACGTGCAGATGGTTGCCATACAGGTATCTTGGAACATAATACACCAAGAAGTCAATACTGAGCCATATAATCCTTTT GAGGAACGACAAGGGGAAATTTCACGGATTGAAAAGGAGCACCAAGTATTACAAGACCAACTTCAAGAAGTGTATGAAAATTATGAGCAG ATAAAACTTAAGGGCTTAGAAGAGACCAGGGACCTGGAAGAGAAGTTGAAAAGGCACTTAGAAGAAAACAAGATCTCAAAGACGGAATTA GATTGGTTCCTTCAAGATTTGGAAAGAGAAATTAAAAAATGGCAACAGGAAAAAAAAGAAATCCAAGAAAGACTAAAATCACTGAAGAAG AAAATTAAAAAGGTTTCAAATGCCAGTGAAATGTATACCCAGAAAAATGATGGAAAGGAAAAGGAACATGAATTACATCTGGATCAGTCC CTTGAAATCAGCAACACACTTACAAATGAGAAAATGAAAATAGAAGAGTATATAAAGAAAGGGAAAGAGGATTATGAAGAGAGTCATCAG AGAGCTGTGGCTGCAGAGGTATCCGTACTTGAAAACTGGAAGGAGAGTGAAGTGTATAAGCTACAGATCATGGAGTCACAAGCAGAAGCC TTTCTGAAGAAGCTGGGGCTGATTAGCCGTGATCCTGCAGCATATCCTGACATGGAGTCTGATATACGTTCATGGGAATTGTTTCTTTCT AATGTTACAAAAGAAATTGAGAAAGCAAAGTCTCAGTTTGAAGAACAAATTAAGGCAATTAAAAATGGTTCTCGGCTCAGTGAACTTTCT AAAGTGCAGATTTCTGAGCTTTCATTTCCTGCCTGTAACACGGTTCATCCCGAGTTACTCCCTGAGTCTTCAGGCGACGATGGCCAAGGG CTTGTGACTTCTGCAAGCGACGTGACTGGAAACCACGCAGCACTTCACAGGGATCCTAGTGTGTTCTCTGCTGGTGATTCCCCAGGGGAG GCTCCTTCTGCGCTGTTGCCAGGGCCACCCCCTGGTCAGCCTGAAGCCACTCAGCTGACAGGGCCAAAACGGGCTGGCCAGGCAGCTCTG TCAGAACGAAGCCCTGTGGCTGATCGGAAGCAGCCTGTTCCTCCAGGACGTGCTGCGCGTTCAAGCCAGTCTCCAAAAAAGCCGTTCAAT AGTATTATTGAGCACCTGTCAGTGGTATTCCCATGTTACAACAGCACTGAGCTTGCTGGTTTTATTAAAAAAGTGCGAAGCAAAAACAAG AACTCACTCTCAGGATTGAGTATTGATGAAATTGTCCAAAGAGTGACAGAACACATTCTAGATGAACAGAAAAAGAAAAAGCCAAACCCA GGAAAGGACAAGAGGACTTATGAGCCCAGCTCTGCCACCCCCGTGACCAGGTCCTCCCAGGGCTCACCCTCGGTGGTTGTTGCACCATCA CCCAAAACCAAGGGGCAGAAAGCAGAAGATGTCCCTGTGAGGATTGCACTGGGTGCAAGTTCCTGTGAAATATGCCACGAGGTGTTCAAA TCAAAAAACGTGCGTGTGCTCAAATGTGGGCACAAGTATCACAAAGGGTGCTTTAAGCAGTGGCTTAAAGGGCAGAGCGCTTGCCCGGCC TGCCAGGGTCGTGATCTCCTGACAGAAGAGTCACCTTCTGGAAGAGGCTGGCCCAGTCAGAATCAGGAGCTGCCTTCCTGCTCTTCTAGG TAGTCACACTTCACTAAAGTGTCATCCACCAGTGTGTTGAATCCGAAGAATGACAATTTTCTACCACTGGTGTAAAAAACAAACATTTGA AGACCCTTGTGCATTGTGTGTCACAAAGCTAAATACATGGAAATCGTTAATATCGCTGATATTAAGTAATTTCCCCACTCTGAGTGAATA CTTTGATGATTGCCAACAGTGGCTAATAAAATGACGGCTACCACACTCATGGGTCACTGGGGCTGCGCAGGGCTCTTTGAGGTGGGTGGC TTCTTTTGGAAAGTACTATGAACGTCTCGAAGCAGTATTCTAGTGATAAGAATTCTTAACATAGCCAAGCGCCCCACGTTTGTTCCCCAC GTTTGTTCCCCTTTTCTGTTTGAAAAACCTGTTCTGGTAGCTCCACAAGAGAGATGATACTGACTTTTTAAATTTTTTACAAGAGTCTGT ATTCCTGATATGCCTATATTTTTCCTCAAAGATTCTGCATTTTAAGGATGGGCATAAGCAAACTATATTTTAATAATTTATAGTTAATGT TAAAATATTGGCTGATTTAGACCAAAAGATTCAAATCTCCTCTTTGTGAAATCCCATCTGCATTTGATTTTTTATTATTTTATGTTCCCC CGTTAGATTGTTTTAAGTGTTTGCTTTTCATCTTTTATAGATGTAATCTGATTTTCAAAAATCATTAACACTTTTTAATTAGTATCGACT AAGACTTTTTCCCCCTGGAATCGAGGCTGTGTGTCCGTCATCCCAGCCCCCGGTTGGAGCCTGCTCTTTGAACTCCGCTGCCTTCCTTAG CAGCTTCTGTCCTCTTCTGTGAGTCAGTCAGCGAGTGCTTGGGATCCGCATCCAGCCGTGCTGAGCACACAACAGGCTGTGTGTGGAAAT GGCCACCACCATTCTCCTTCCCCACCCCACCACAAAAAGAGAAGCTGTGTCTTTAGACAACCCTGAGGTATCTGTGTTACAATCGTTCTG TGTTTGATATTTGTGTAAAGTATGCATGCAGTCTTGTACTGTGACCTAAGAACAAAACTGTAACTGCATTAGAAACCATGAAAAAATTAG ATATTGTTTTGTGACTTTTAGACAGTGGTAAATATAGAACCATGAATTCTGGTCACATTCCATTTCTCTCCAACATGAAGGATCAAAAAA TGTTTTTCAATGTGTTCTTTGTTCCACTGGAAACTTAGAGTCATGAGTTTATGAGCTGATTTGGTCACCTTCCTCTGCCTTTGTTCACTG TGAGTTCTGATGTCTTAGTGACTTAGTTCTTAGAAGCTCACGCCTTAGTTTGAAACAGATTCTCCACGGTGGTCCCCAAAACACTGTCTG CATATCCATAAGAATTGAGCGCTATGGGTGTTAACGTGCATGAGGATCAGTTTGCAGCAGCAAGTACAAAAGGAGAAGAGGAACATCCGT TGAATGAGTGTGTTTTGTACATAACTTCAGATACTTGTGAACATGCCTTATATTTGTCCAACAACTGTCAGAATAAAGAACATTCTAAAA >In-frame_ENST00000407082_ENST00000355666_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(amino acids)=619AA_start in transcript=1023_stop in transcript=2882 MRWRRRSATRTGTRAGDAHTVLSESNRNDEHCGNSNNKCEVIPESTSAVTNIPHVQMVAIQVSWNIIHQEVNTEPYNPFEERQGEISRIE KEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEM YTQKNDGKEKEHELHLDQSLEISNTLTNEKMKIEEYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLKKLGLISRD PAAYPDMESDIRSWELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNTVHPELLPESSGDDGQGLVTSASDVTGN HAALHRDPSVFSAGDSPGEAPSALLPGPPPGQPEATQLTGPKRAGQAALSERSPVADRKQPVPPGRAARSSQSPKKPFNSIIEHLSVVFP CYNSTELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKAEDV -------------------------------------------------------------- >In-frame_ENST00000407082_ENST00000399017_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(transcript)=4421nt_BP=1066nt GCGGCGGCGGCTGAGGAGCCCGGCTGAGGCGCCAGTACCCGGCCCGGTCCGCATTTCGCCTTCCGGCTTCGGTTTCCCTCGGCCCAGCAC GCCCCGGCCCCGCCCCAGCCCTCCTGATCCCTCGCAGCCCGGCTCCGGCCGCCCGCCTCTGCCGCCGCAATGATGATGATGGCGCTGAGC AAGACCTTCGGGCAGAAGCCCGTGAAGTTCCAGCTGGAGGACGACGGCGAGTTCTACATGATCGGCTCCGAGGTGGGAAACTACCTCCGT ATGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACTCTGGAGGCGACTAGCCACTGTGGAAGAGAGGAAGAAAATAGTTGCATCGTCA CATGGTAAAAAAACAAAACCTAACACTAAGGATCACGGATACACGACTCTAGCCACCAGTGTGACCCTGTTAAAAGCCTCGGAAGTGGAA GAGATTCTGGATGGCAACGATGAGAAGTACAAGGCTGTGTCCATCAGCACAGAGCCCCCCACCTACCTCAGCTTTGATGACCATGACCCA GCTGTGATCCATGAGAACGCATCTCAGCCCGAGGTGCTGGTCCCCATCCGGCTGGACATGGAGATCGATGGGCAGAAGCTGCGAGACGCC TTCACCTGGAACATGAATGAGAAGTTGATGACGCCTGAGATGTTTTCAGAAATCCTCTGTGACGATCTGGATTTGAACCCGCTGACGTTT GTGCCAGCCATCGCCTCTGCCATCAGACAGCAGATCGAGTCCTACCCCACGGACAGCATCCTGGAGGACCAGTCAGACCAGCGCGTCATC ATCAAGCTGAACATCCATGTGGGAAACATTTCCCTGGTGGACCAGTTTGAGTGGGACATGTCAGAGAAGGAGAACTCACCAGAGAAGTTT GCCCTGAAGCTGTGCTCGGAGCTGGGGTTGGGCGGGGAGTTTGTCACCACCATCGCATACAGCATCCGGGGACAGCTGAGCTGGCATCAG AAGACCTACGCCTTCAGGAGACTCTGACAGACGCTGAGATGGAGAAGAAGATCCGCGACCAGGACAGGAACACGAGCAGGTGATGCTCAT ACAGTCCTGAGTGAGTCTAACAGAAATGATGAGCACTGTGGAAATTCTAACAACAAATGTGAAGTAATTCCAGAAAGCACCAGTGCAGTA ACAAACATTCCACACGTGCAGATGGTTGCCATACAGGTATCTTGGAACATAATACACCAAGAAGTCAATACTGAGCCATATAATCCTTTT GAGGAACGACAAGGGGAAATTTCACGGATTGAAAAGGAGCACCAAGTATTACAAGACCAACTTCAAGAAGTGTATGAAAATTATGAGCAG ATAAAACTTAAGGGCTTAGAAGAGACCAGGGACCTGGAAGAGAAGTTGAAAAGGCACTTAGAAGAAAACAAGATCTCAAAGACGGAATTA GATTGGTTCCTTCAAGATTTGGAAAGAGAAATTAAAAAATGGCAACAGGAAAAAAAAGAAATCCAAGAAAGACTAAAATCACTGAAGAAG AAAATTAAAAAGGTTTCAAATGCCAGTGAAATGTATACCCAGAAAAATGATGGAAAGGAAAAGGAACATGAATTACATCTGGATCAGTCC CTTGAAATCAGCAACACACTTACAAATGAGAAAATGAAAATAGAAGAGTATATAAAGAAAGGGAAAGAGGATTATGAAGAGAGTCATCAG AGAGCTGTGGCTGCAGAGGTATCCGTACTTGAAAACTGGAAGGAGAGTGAAGTGTATAAGCTACAGATCATGGAGTCACAAGCAGAAGCC TTTCTGAAGAAGCTGGGGCTGATTAGCCGTGATCCTGCAGCATATCCTGACATGGAGTCTGATATACGTTCATGGGAATTGTTTCTTTCT AATGTTACAAAAGAAATTGAGAAAGCAAAGTCTCAGTTTGAAGAACAAATTAAGGCAATTAAAAATGGTTCTCGGCTCAGTGAACTTTCT AAAGTGCAGATTTCTGAGCTTTCATTTCCTGCCTGTAACACGGTTCATCCCGAGTTACTCCCTGAGTCTTCAGGCGACGATGGCCAAGGG CTTGTGACTTCTGCAAGCGACGTGACTGGAAACCACGCAGCACTTCACAGGGATCCTAGTGTGTTCTCTGCTGGTGATTCCCCAGGGGAG GCTCCTTCTGCGCTGTTGCCAGGGCCACCCCCTGGTCAGCCTGAAGCCACTCAGCTGACAGGGCCAAAACGGGCTGGCCAGGCAGCTCTG TCAGAACGAAGCCCTGTGGCTGATCGGAAGCAGCCTGTTCCTCCAGGACGTGCTGCGCGTTCAAGCCAGTCTCCAAAAAAGCCGTTCAAT AGTATTATTGAGCACCTGTCAGTGGTATTCCCATGTTACAACAGCACTGAGCTTGCTGGTTTTATTAAAAAAGTGCGAAGCAAAAACAAG AACTCACTCTCAGGATTGAGTATTGATGAAATTGTCCAAAGAGTGACAGAACACATTCTAGATGAACAGAAAAAGAAAAAGCCAAACCCA GGAAAGGACAAGAGGACTTATGAGCCCAGCTCTGCCACCCCCGTGACCAGGTCCTCCCAGGGCTCACCCTCGGTGGTTGTTGCACCATCA CCCAAAACCAAGGGGCAGAAAGCAGAAGATGTCCCTGTGAGGATTGCACTGGGTGCAAGTTCCTGTGAAATATGCCACGAGGTGTTCAAA TCAAAAAACGTGCGTGTGCTCAAATGTGGGCACAAGTATCACAAAGGGTGCTTTAAGCAGTGGCTTAAAGGGCAGAGCGCTTGCCCGGCC TGCCAGGGTCGTGATCTCCTGACAGAAGAGTCACCTTCTGGAAGAGGCTGGCCCAGTCAGAATCAGGAGCTGCCTTCCTGCTCTTCTAGG TAGTCACACTTCACTAAAGTGTCATCCACCAGTGTGTTGAATCCGAAGAATGACAATTTTCTACCACTGGTGTAAAAAACAAACATTTGA AGACCCTTGTGCATTGTGTGTCACAAAGCTAAATACATGGAAATCGTTAATATCGCTGATATTAAGTAATTTCCCCACTCTGAGTGAATA CTTTGATGATTGCCAACAGTGGCTAATAAAATGACGGCTACCACACTCATGGGTCACTGGGGCTGCGCAGGGCTCTTTGAGGTGGGTGGC TTCTTTTGGAAAGTACTATGAACGTCTCGAAGCAGTATTCTAGTGATAAGAATTCTTAACATAGCCAAGCGCCCCACGTTTGTTCCCCAC GTTTGTTCCCCTTTTCTGTTTGAAAAACCTGTTCTGGTAGCTCCACAAGAGAGATGATACTGACTTTTTAAATTTTTTACAAGAGTCTGT ATTCCTGATATGCCTATATTTTTCCTCAAAGATTCTGCATTTTAAGGATGGGCATAAGCAAACTATATTTTAATAATTTATAGTTAATGT TAAAATATTGGCTGATTTAGACCAAAAGATTCAAATCTCCTCTTTGTGAAATCCCATCTGCATTTGATTTTTTATTATTTTATGTTCCCC CGTTAGATTGTTTTAAGTGTTTGCTTTTCATCTTTTATAGATGTAATCTGATTTTCAAAAATCATTAACACTTTTTAATTAGTATCGACT AAGACTTTTTCCCCCTGGAATCGAGGCTGTGTGTCCGTCATCCCAGCCCCCGGTTGGAGCCTGCTCTTTGAACTCCGCTGCCTTCCTTAG CAGCTTCTGTCCTCTTCTGTGAGTCAGTCAGCGAGTGCTTGGGATCCGCATCCAGCCGTGCTGAGCACACAACAGGCTGTGTGTGGAAAT GGCCACCACCATTCTCCTTCCCCACCCCACCACAAAAAGAGAAGCTGTGTCTTTAGACAACCCTGAGGTATCTGTGTTACAATCGTTCTG TGTTTGATATTTGTGTAAAGTATGCATGCAGTCTTGTACTGTGACCTAAGAACAAAACTGTAACTGCATTAGAAACCATGAAAAAATTAG ATATTGTTTTGTGACTTTTAGACAGTGGTAAATATAGAACCATGAATTCTGGTCACATTCCATTTCTCTCCAACATGAAGGATCAAAAAA TGTTTTTCAATGTGTTCTTTGTTCCACTGGAAACTTAGAGTCATGAGTTTATGAGCTGATTTGGTCACCTTCCTCTGCCTTTGTTCACTG TGAGTTCTGATGTCTTAGTGACTTAGTTCTTAGAAGCTCACGCCTTAGTTTGAAACAGATTCTCCACGGTGGTCCCCAAAACACTGTCTG CATATCCATAAGAATTGAGCGCTATGGGTGTTAACGTGCATGAGGATCAGTTTGCAGCAGCAAGTACAAAAGGAGAAGAGGAACATCCGT TGAATGAGTGTGTTTTGTACATAACTTCAGATACTTGTGAACATGCCTTATATTTGTCCAACAACTGTCAGAATAAAGAACATTCTAAAA >In-frame_ENST00000407082_ENST00000399017_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(amino acids)=619AA_start in transcript=1023_stop in transcript=2882 MRWRRRSATRTGTRAGDAHTVLSESNRNDEHCGNSNNKCEVIPESTSAVTNIPHVQMVAIQVSWNIIHQEVNTEPYNPFEERQGEISRIE KEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEM YTQKNDGKEKEHELHLDQSLEISNTLTNEKMKIEEYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLKKLGLISRD PAAYPDMESDIRSWELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNTVHPELLPESSGDDGQGLVTSASDVTGN HAALHRDPSVFSAGDSPGEAPSALLPGPPPGQPEATQLTGPKRAGQAALSERSPVADRKQPVPPGRAARSSQSPKKPFNSIIEHLSVVFP CYNSTELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKAEDV -------------------------------------------------------------- >In-frame_ENST00000407082_ENST00000354749_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(transcript)=4421nt_BP=1066nt GCGGCGGCGGCTGAGGAGCCCGGCTGAGGCGCCAGTACCCGGCCCGGTCCGCATTTCGCCTTCCGGCTTCGGTTTCCCTCGGCCCAGCAC GCCCCGGCCCCGCCCCAGCCCTCCTGATCCCTCGCAGCCCGGCTCCGGCCGCCCGCCTCTGCCGCCGCAATGATGATGATGGCGCTGAGC AAGACCTTCGGGCAGAAGCCCGTGAAGTTCCAGCTGGAGGACGACGGCGAGTTCTACATGATCGGCTCCGAGGTGGGAAACTACCTCCGT ATGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACTCTGGAGGCGACTAGCCACTGTGGAAGAGAGGAAGAAAATAGTTGCATCGTCA CATGGTAAAAAAACAAAACCTAACACTAAGGATCACGGATACACGACTCTAGCCACCAGTGTGACCCTGTTAAAAGCCTCGGAAGTGGAA GAGATTCTGGATGGCAACGATGAGAAGTACAAGGCTGTGTCCATCAGCACAGAGCCCCCCACCTACCTCAGCTTTGATGACCATGACCCA GCTGTGATCCATGAGAACGCATCTCAGCCCGAGGTGCTGGTCCCCATCCGGCTGGACATGGAGATCGATGGGCAGAAGCTGCGAGACGCC TTCACCTGGAACATGAATGAGAAGTTGATGACGCCTGAGATGTTTTCAGAAATCCTCTGTGACGATCTGGATTTGAACCCGCTGACGTTT GTGCCAGCCATCGCCTCTGCCATCAGACAGCAGATCGAGTCCTACCCCACGGACAGCATCCTGGAGGACCAGTCAGACCAGCGCGTCATC ATCAAGCTGAACATCCATGTGGGAAACATTTCCCTGGTGGACCAGTTTGAGTGGGACATGTCAGAGAAGGAGAACTCACCAGAGAAGTTT GCCCTGAAGCTGTGCTCGGAGCTGGGGTTGGGCGGGGAGTTTGTCACCACCATCGCATACAGCATCCGGGGACAGCTGAGCTGGCATCAG AAGACCTACGCCTTCAGGAGACTCTGACAGACGCTGAGATGGAGAAGAAGATCCGCGACCAGGACAGGAACACGAGCAGGTGATGCTCAT ACAGTCCTGAGTGAGTCTAACAGAAATGATGAGCACTGTGGAAATTCTAACAACAAATGTGAAGTAATTCCAGAAAGCACCAGTGCAGTA ACAAACATTCCACACGTGCAGATGGTTGCCATACAGGTATCTTGGAACATAATACACCAAGAAGTCAATACTGAGCCATATAATCCTTTT GAGGAACGACAAGGGGAAATTTCACGGATTGAAAAGGAGCACCAAGTATTACAAGACCAACTTCAAGAAGTGTATGAAAATTATGAGCAG ATAAAACTTAAGGGCTTAGAAGAGACCAGGGACCTGGAAGAGAAGTTGAAAAGGCACTTAGAAGAAAACAAGATCTCAAAGACGGAATTA GATTGGTTCCTTCAAGATTTGGAAAGAGAAATTAAAAAATGGCAACAGGAAAAAAAAGAAATCCAAGAAAGACTAAAATCACTGAAGAAG AAAATTAAAAAGGTTTCAAATGCCAGTGAAATGTATACCCAGAAAAATGATGGAAAGGAAAAGGAACATGAATTACATCTGGATCAGTCC CTTGAAATCAGCAACACACTTACAAATGAGAAAATGAAAATAGAAGAGTATATAAAGAAAGGGAAAGAGGATTATGAAGAGAGTCATCAG AGAGCTGTGGCTGCAGAGGTATCCGTACTTGAAAACTGGAAGGAGAGTGAAGTGTATAAGCTACAGATCATGGAGTCACAAGCAGAAGCC TTTCTGAAGAAGCTGGGGCTGATTAGCCGTGATCCTGCAGCATATCCTGACATGGAGTCTGATATACGTTCATGGGAATTGTTTCTTTCT AATGTTACAAAAGAAATTGAGAAAGCAAAGTCTCAGTTTGAAGAACAAATTAAGGCAATTAAAAATGGTTCTCGGCTCAGTGAACTTTCT AAAGTGCAGATTTCTGAGCTTTCATTTCCTGCCTGTAACACGGTTCATCCCGAGTTACTCCCTGAGTCTTCAGGCGACGATGGCCAAGGG CTTGTGACTTCTGCAAGCGACGTGACTGGAAACCACGCAGCACTTCACAGGGATCCTAGTGTGTTCTCTGCTGGTGATTCCCCAGGGGAG GCTCCTTCTGCGCTGTTGCCAGGGCCACCCCCTGGTCAGCCTGAAGCCACTCAGCTGACAGGGCCAAAACGGGCTGGCCAGGCAGCTCTG TCAGAACGAAGCCCTGTGGCTGATCGGAAGCAGCCTGTTCCTCCAGGACGTGCTGCGCGTTCAAGCCAGTCTCCAAAAAAGCCGTTCAAT AGTATTATTGAGCACCTGTCAGTGGTATTCCCATGTTACAACAGCACTGAGCTTGCTGGTTTTATTAAAAAAGTGCGAAGCAAAAACAAG AACTCACTCTCAGGATTGAGTATTGATGAAATTGTCCAAAGAGTGACAGAACACATTCTAGATGAACAGAAAAAGAAAAAGCCAAACCCA GGAAAGGACAAGAGGACTTATGAGCCCAGCTCTGCCACCCCCGTGACCAGGTCCTCCCAGGGCTCACCCTCGGTGGTTGTTGCACCATCA CCCAAAACCAAGGGGCAGAAAGCAGAAGATGTCCCTGTGAGGATTGCACTGGGTGCAAGTTCCTGTGAAATATGCCACGAGGTGTTCAAA TCAAAAAACGTGCGTGTGCTCAAATGTGGGCACAAGTATCACAAAGGGTGCTTTAAGCAGTGGCTTAAAGGGCAGAGCGCTTGCCCGGCC TGCCAGGGTCGTGATCTCCTGACAGAAGAGTCACCTTCTGGAAGAGGCTGGCCCAGTCAGAATCAGGAGCTGCCTTCCTGCTCTTCTAGG TAGTCACACTTCACTAAAGTGTCATCCACCAGTGTGTTGAATCCGAAGAATGACAATTTTCTACCACTGGTGTAAAAAACAAACATTTGA AGACCCTTGTGCATTGTGTGTCACAAAGCTAAATACATGGAAATCGTTAATATCGCTGATATTAAGTAATTTCCCCACTCTGAGTGAATA CTTTGATGATTGCCAACAGTGGCTAATAAAATGACGGCTACCACACTCATGGGTCACTGGGGCTGCGCAGGGCTCTTTGAGGTGGGTGGC TTCTTTTGGAAAGTACTATGAACGTCTCGAAGCAGTATTCTAGTGATAAGAATTCTTAACATAGCCAAGCGCCCCACGTTTGTTCCCCAC GTTTGTTCCCCTTTTCTGTTTGAAAAACCTGTTCTGGTAGCTCCACAAGAGAGATGATACTGACTTTTTAAATTTTTTACAAGAGTCTGT ATTCCTGATATGCCTATATTTTTCCTCAAAGATTCTGCATTTTAAGGATGGGCATAAGCAAACTATATTTTAATAATTTATAGTTAATGT TAAAATATTGGCTGATTTAGACCAAAAGATTCAAATCTCCTCTTTGTGAAATCCCATCTGCATTTGATTTTTTATTATTTTATGTTCCCC CGTTAGATTGTTTTAAGTGTTTGCTTTTCATCTTTTATAGATGTAATCTGATTTTCAAAAATCATTAACACTTTTTAATTAGTATCGACT AAGACTTTTTCCCCCTGGAATCGAGGCTGTGTGTCCGTCATCCCAGCCCCCGGTTGGAGCCTGCTCTTTGAACTCCGCTGCCTTCCTTAG CAGCTTCTGTCCTCTTCTGTGAGTCAGTCAGCGAGTGCTTGGGATCCGCATCCAGCCGTGCTGAGCACACAACAGGCTGTGTGTGGAAAT GGCCACCACCATTCTCCTTCCCCACCCCACCACAAAAAGAGAAGCTGTGTCTTTAGACAACCCTGAGGTATCTGTGTTACAATCGTTCTG TGTTTGATATTTGTGTAAAGTATGCATGCAGTCTTGTACTGTGACCTAAGAACAAAACTGTAACTGCATTAGAAACCATGAAAAAATTAG ATATTGTTTTGTGACTTTTAGACAGTGGTAAATATAGAACCATGAATTCTGGTCACATTCCATTTCTCTCCAACATGAAGGATCAAAAAA TGTTTTTCAATGTGTTCTTTGTTCCACTGGAAACTTAGAGTCATGAGTTTATGAGCTGATTTGGTCACCTTCCTCTGCCTTTGTTCACTG TGAGTTCTGATGTCTTAGTGACTTAGTTCTTAGAAGCTCACGCCTTAGTTTGAAACAGATTCTCCACGGTGGTCCCCAAAACACTGTCTG CATATCCATAAGAATTGAGCGCTATGGGTGTTAACGTGCATGAGGATCAGTTTGCAGCAGCAAGTACAAAAGGAGAAGAGGAACATCCGT TGAATGAGTGTGTTTTGTACATAACTTCAGATACTTGTGAACATGCCTTATATTTGTCCAACAACTGTCAGAATAAAGAACATTCTAAAA >In-frame_ENST00000407082_ENST00000354749_BI050912_SMARCB1_chr22_24175831_+_TTC3_chr21_38538777_length(amino acids)=619AA_start in transcript=1023_stop in transcript=2882 MRWRRRSATRTGTRAGDAHTVLSESNRNDEHCGNSNNKCEVIPESTSAVTNIPHVQMVAIQVSWNIIHQEVNTEPYNPFEERQGEISRIE KEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEM YTQKNDGKEKEHELHLDQSLEISNTLTNEKMKIEEYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLKKLGLISRD PAAYPDMESDIRSWELFLSNVTKEIEKAKSQFEEQIKAIKNGSRLSELSKVQISELSFPACNTVHPELLPESSGDDGQGLVTSASDVTGN HAALHRDPSVFSAGDSPGEAPSALLPGPPPGQPEATQLTGPKRAGQAALSERSPVADRKQPVPPGRAARSSQSPKKPFNSIIEHLSVVFP CYNSTELAGFIKKVRSKNKNSLSGLSIDEIVQRVTEHILDEQKKKKPNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKAEDV -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for SMARCB1-TTC3 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000354749 | 0 | 45 | 1_230 | 0 | 2026.0 | POLG | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000355666 | 0 | 46 | 1_230 | 0 | 2026.0 | POLG | |
Tgene | TTC3 | chr22:24175831 | chr21:38538777 | ENST00000399017 | 0 | 46 | 1_230 | 0 | 2026.0 | POLG |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | SMARCB1 | chr22:24175831 | chr21:38538777 | ENST00000263121 | + | 1 | 9 | 304_318 | 0 | 386.0 | PPP1R15A |
Hgene | SMARCB1 | chr22:24175831 | chr21:38538777 | ENST00000407422 | + | 1 | 9 | 304_318 | 0 | 377.0 | PPP1R15A |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for SMARCB1-TTC3 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for SMARCB1-TTC3 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | SMARCB1 | C0206743 | Rhabdoid Tumor | 10 | CGI;CLINGEN;CTD_human |
Hgene | SMARCB1 | C1836327 | RHABDOID TUMOR PREDISPOSITION SYNDROME 1 (disorder) | 10 | CLINGEN;CTD_human;GENOMICS_ENGLAND |
Hgene | SMARCB1 | C1266184 | Atypical Teratoid Rhabdoid Tumor | 8 | CLINGEN;ORPHANET |
Hgene | SMARCB1 | C1836326 | Teratoid Tumor, Atypical | 8 | CLINGEN |
Hgene | SMARCB1 | C2750405 | Malignant Rhabdoid Tumor, Somatic | 8 | CLINGEN;CTD_human |
Hgene | SMARCB1 | C1335929 | Schwannomatosis | 4 | CTD_human;GENOMICS_ENGLAND;ORPHANET |
Hgene | SMARCB1 | C3553248 | MENTAL RETARDATION, AUTOSOMAL DOMINANT 15 | 3 | GENOMICS_ENGLAND;UNIPROT |
Hgene | SMARCB1 | C0917817 | Neurofibromatosis 3 | 2 | ORPHANET |
Hgene | SMARCB1 | C2931480 | Neurofibromatosis, Type 3, mixed central and peripheral | 2 | ORPHANET |
Hgene | SMARCB1 | C0025286 | Meningioma | 1 | ORPHANET |
Hgene | SMARCB1 | C0265338 | Coffin-Siris syndrome | 1 | CTD_human;GENOMICS_ENGLAND |
Hgene | SMARCB1 | C2985524 | Rhabdoid tumor predisposition syndrome | 1 | ORPHANET |
Hgene | SMARCB1 | C4048809 | SCHWANNOMATOSIS 1 | 1 | CTD_human |