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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:SNHG1-DDX39B (FusionGDB2 ID:83904)

Fusion Gene Summary for SNHG1-DDX39B

check button Fusion gene summary
Fusion gene informationFusion gene name: SNHG1-DDX39B
Fusion gene ID: 83904
HgeneTgene
Gene symbol

SNHG1

DDX39B

Gene ID

23642

7919

Gene namesmall nucleolar RNA host gene 1DExD-box helicase 39B
SynonymsLINC00057|NCRNA00057|U22HG|UHG|lncRNA16BAT1|D6S81E|UAP56
Cytomap

11q12.3

6p21.33

Type of genencRNAprotein-coding
DescriptionU22 snoRNA hostlong intergenic non-protein coding RNA 57small nucleolar RNA host gene 1 (non-protein coding)spliceosome RNA helicase DDX39B56 kDa U2AF65-associated proteinATP-dependent RNA helicase p47DEAD (Asp-Glu-Ala-Asp) box polypeptide 39BDEAD-box helicase 39BHLA-B-associated transcript 1 proteinnuclear RNA helicase (DEAD family)spliceosome RNA helic
Modification date2020031520200313
UniProtAcc.

Q13838

Ensembl transtripts involved in fusion geneENST00000384756, ENST00000364799, 
ENST00000384693, ENST00000383926, 
ENST00000516331, ENST00000384706, 
ENST00000363981, ENST00000384147, 
ENST00000365607, 
ENST00000376177, 
ENST00000396172, ENST00000417556, 
ENST00000458640, ENST00000462421, 
ENST00000415382, ENST00000453105, 
ENST00000449074, ENST00000552820, 
ENST00000463430, ENST00000438578, 
ENST00000415689, ENST00000456476, 
ENST00000412106, ENST00000547039, 
ENST00000550435, ENST00000453488, 
ENST00000453138, ENST00000552288, 
ENST00000441425, ENST00000456666, 
ENST00000546633, ENST00000483957, 
ENST00000430703, ENST00000416863, 
ENST00000413678, ENST00000414440, 
ENST00000547489, ENST00000551031, 
ENST00000468089, ENST00000400293, 
ENST00000400296, ENST00000400295, 
ENST00000383508, ENST00000548340, 
ENST00000548331, ENST00000495391, 
ENST00000446341, ENST00000548614, 
ENST00000448296, ENST00000412330, 
ENST00000445218, ENST00000546637, 
ENST00000489325, ENST00000450987, 
ENST00000431360, ENST00000430784, 
ENST00000550217, ENST00000470514, 
ENST00000549374, 
Fusion gene scores* DoF score18 X 13 X 5=117010 X 4 X 6=240
# samples 1811
** MAII scorelog2(18/1170*10)=-2.70043971814109
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(11/240*10)=-1.12553088208386
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: SNHG1 [Title/Abstract] AND DDX39B [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointSNHG1(62622895)-DDX39B(31503262), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneDDX39B

GO:0000245

spliceosomal complex assembly

18593880

TgeneDDX39B

GO:0006406

mRNA export from nucleus

17190602

TgeneDDX39B

GO:0008380

RNA splicing

18593880

TgeneDDX39B

GO:0010501

RNA secondary structure unwinding

18593880

TgeneDDX39B

GO:0046784

viral mRNA export from host cell nucleus

18974867


check buttonFusion gene breakpoints across SNHG1 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across DDX39B (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4STADTCGA-BR-7958SNHG1chr11

62622895

-DDX39Bchr6

31503262

-


Top

Fusion Gene ORF analysis for SNHG1-DDX39B

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
intron-3CDSENST00000384756ENST00000376177SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000384756ENST00000396172SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000384756ENST00000417556SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000384756ENST00000458640SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000462421SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000415382SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000453105SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000449074SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000552820SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000463430SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000438578SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000415689SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000456476SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000412106SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000547039SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000550435SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000453488SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000453138SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000552288SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000441425SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000456666SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000546633SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000483957SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000430703SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000416863SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000413678SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000414440SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000547489SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000551031SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000468089SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000400293SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000400296SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000400295SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000383508SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000548340SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000548331SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000495391SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000446341SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000548614SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000448296SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000412330SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000445218SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000546637SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000489325SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000450987SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000431360SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000430784SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000550217SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000470514SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384756ENST00000549374SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000364799ENST00000376177SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000364799ENST00000396172SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000364799ENST00000417556SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000364799ENST00000458640SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000462421SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000415382SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000453105SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000449074SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000552820SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000463430SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000438578SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000415689SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000456476SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000412106SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000547039SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000550435SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000453488SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000453138SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000552288SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000441425SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000456666SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000546633SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000483957SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000430703SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000416863SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000413678SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000414440SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000547489SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000551031SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000468089SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000400293SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000400296SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000400295SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000383508SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000548340SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000548331SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000495391SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000446341SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000548614SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000448296SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000412330SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000445218SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000546637SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000489325SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000450987SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000431360SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000430784SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000550217SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000470514SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000364799ENST00000549374SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000384693ENST00000376177SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000384693ENST00000396172SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000384693ENST00000417556SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000384693ENST00000458640SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000462421SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000415382SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000453105SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000449074SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000552820SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000463430SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000438578SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000415689SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000456476SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000412106SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000547039SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000550435SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000453488SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000453138SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000552288SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000441425SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000456666SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000546633SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000483957SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000430703SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000416863SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000413678SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000414440SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000547489SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000551031SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000468089SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000400293SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000400296SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000400295SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000383508SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000548340SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000548331SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000495391SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000446341SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000548614SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384693ENST00000448296SNHG1chr11

62622895

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31503262

-
intron-intronENST00000384693ENST00000412330SNHG1chr11

62622895

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31503262

-
intron-intronENST00000384693ENST00000445218SNHG1chr11

62622895

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31503262

-
intron-intronENST00000384693ENST00000546637SNHG1chr11

62622895

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31503262

-
intron-intronENST00000384693ENST00000489325SNHG1chr11

62622895

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31503262

-
intron-intronENST00000384693ENST00000450987SNHG1chr11

62622895

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31503262

-
intron-intronENST00000384693ENST00000431360SNHG1chr11

62622895

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31503262

-
intron-intronENST00000384693ENST00000430784SNHG1chr11

62622895

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31503262

-
intron-intronENST00000384693ENST00000550217SNHG1chr11

62622895

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31503262

-
intron-intronENST00000384693ENST00000470514SNHG1chr11

62622895

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31503262

-
intron-intronENST00000384693ENST00000549374SNHG1chr11

62622895

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31503262

-
intron-3CDSENST00000383926ENST00000376177SNHG1chr11

62622895

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31503262

-
intron-3CDSENST00000383926ENST00000396172SNHG1chr11

62622895

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31503262

-
intron-3CDSENST00000383926ENST00000417556SNHG1chr11

62622895

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31503262

-
intron-3CDSENST00000383926ENST00000458640SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000462421SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000415382SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000453105SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000449074SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000552820SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000463430SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000438578SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000415689SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000456476SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000412106SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000547039SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000550435SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000453488SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000453138SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000552288SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000441425SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000456666SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000546633SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000483957SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000430703SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000416863SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000413678SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000414440SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000547489SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000551031SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000468089SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000400293SNHG1chr11

62622895

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31503262

-
intron-intronENST00000383926ENST00000400296SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000400295SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000383508SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000548340SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000548331SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000495391SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000446341SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000548614SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000448296SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000412330SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000445218SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000546637SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000489325SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000450987SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000431360SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000430784SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000550217SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000470514SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000383926ENST00000549374SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000516331ENST00000376177SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000516331ENST00000396172SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000516331ENST00000417556SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000516331ENST00000458640SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000462421SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000415382SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000453105SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000449074SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000552820SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000463430SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000438578SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000415689SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000456476SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000412106SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000547039SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000550435SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000453488SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000453138SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000552288SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000441425SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000456666SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000546633SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000483957SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000430703SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000416863SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000413678SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000414440SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000547489SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000551031SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000468089SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000400293SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000400296SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000400295SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000383508SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000548340SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000548331SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000495391SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000446341SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000548614SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000448296SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000412330SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000445218SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000546637SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000489325SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000450987SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000431360SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000430784SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000550217SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000470514SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000516331ENST00000549374SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000384706ENST00000376177SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000384706ENST00000396172SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000384706ENST00000417556SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000384706ENST00000458640SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000462421SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000415382SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000453105SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000449074SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000552820SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000463430SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000438578SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000415689SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000456476SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000412106SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000547039SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000550435SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000453488SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000453138SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000552288SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000441425SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000456666SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000546633SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000483957SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000430703SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000416863SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000413678SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000414440SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000547489SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000551031SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000468089SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000400293SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000400296SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000400295SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000383508SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000548340SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000548331SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000495391SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000446341SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000548614SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000448296SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000412330SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000445218SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000546637SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000489325SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000450987SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000431360SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000430784SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000550217SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000470514SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000384706ENST00000549374SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000363981ENST00000376177SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000363981ENST00000396172SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000363981ENST00000417556SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-3CDSENST00000363981ENST00000458640SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000363981ENST00000462421SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000363981ENST00000415382SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000363981ENST00000453105SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000363981ENST00000449074SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000363981ENST00000552820SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000363981ENST00000463430SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000363981ENST00000438578SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000363981ENST00000415689SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000363981ENST00000456476SNHG1chr11

62622895

-DDX39Bchr6

31503262

-
intron-intronENST00000363981ENST00000412106SNHG1chr11

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intron-intronENST00000363981ENST00000547039SNHG1chr11

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intron-intronENST00000363981ENST00000550435SNHG1chr11

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intron-intronENST00000363981ENST00000453488SNHG1chr11

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intron-intronENST00000363981ENST00000453138SNHG1chr11

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intron-intronENST00000363981ENST00000552288SNHG1chr11

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intron-intronENST00000363981ENST00000441425SNHG1chr11

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intron-intronENST00000363981ENST00000456666SNHG1chr11

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intron-intronENST00000363981ENST00000546633SNHG1chr11

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intron-intronENST00000363981ENST00000483957SNHG1chr11

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intron-intronENST00000363981ENST00000430703SNHG1chr11

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intron-intronENST00000363981ENST00000416863SNHG1chr11

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intron-intronENST00000363981ENST00000413678SNHG1chr11

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intron-intronENST00000363981ENST00000414440SNHG1chr11

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intron-intronENST00000363981ENST00000547489SNHG1chr11

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intron-intronENST00000363981ENST00000551031SNHG1chr11

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intron-intronENST00000363981ENST00000468089SNHG1chr11

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intron-intronENST00000363981ENST00000400293SNHG1chr11

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intron-intronENST00000363981ENST00000400296SNHG1chr11

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intron-intronENST00000363981ENST00000400295SNHG1chr11

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intron-intronENST00000363981ENST00000383508SNHG1chr11

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intron-intronENST00000363981ENST00000548340SNHG1chr11

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intron-intronENST00000363981ENST00000548331SNHG1chr11

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intron-intronENST00000363981ENST00000495391SNHG1chr11

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intron-intronENST00000363981ENST00000446341SNHG1chr11

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intron-intronENST00000363981ENST00000548614SNHG1chr11

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intron-intronENST00000363981ENST00000448296SNHG1chr11

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intron-intronENST00000363981ENST00000412330SNHG1chr11

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intron-intronENST00000363981ENST00000445218SNHG1chr11

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intron-intronENST00000363981ENST00000546637SNHG1chr11

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intron-intronENST00000363981ENST00000489325SNHG1chr11

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intron-intronENST00000363981ENST00000450987SNHG1chr11

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intron-intronENST00000363981ENST00000431360SNHG1chr11

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intron-intronENST00000363981ENST00000430784SNHG1chr11

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intron-intronENST00000363981ENST00000550217SNHG1chr11

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intron-intronENST00000363981ENST00000470514SNHG1chr11

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intron-intronENST00000363981ENST00000549374SNHG1chr11

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intron-3CDSENST00000384147ENST00000376177SNHG1chr11

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intron-3CDSENST00000384147ENST00000396172SNHG1chr11

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intron-3CDSENST00000384147ENST00000417556SNHG1chr11

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intron-3CDSENST00000384147ENST00000458640SNHG1chr11

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intron-intronENST00000384147ENST00000462421SNHG1chr11

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intron-intronENST00000384147ENST00000415382SNHG1chr11

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intron-intronENST00000384147ENST00000453105SNHG1chr11

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intron-intronENST00000384147ENST00000449074SNHG1chr11

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intron-intronENST00000384147ENST00000552820SNHG1chr11

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intron-intronENST00000384147ENST00000463430SNHG1chr11

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intron-intronENST00000384147ENST00000438578SNHG1chr11

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intron-intronENST00000384147ENST00000415689SNHG1chr11

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intron-intronENST00000384147ENST00000456476SNHG1chr11

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intron-intronENST00000384147ENST00000412106SNHG1chr11

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intron-intronENST00000384147ENST00000547039SNHG1chr11

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intron-intronENST00000384147ENST00000550435SNHG1chr11

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intron-intronENST00000384147ENST00000453488SNHG1chr11

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intron-intronENST00000384147ENST00000453138SNHG1chr11

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intron-intronENST00000384147ENST00000552288SNHG1chr11

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intron-intronENST00000384147ENST00000441425SNHG1chr11

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intron-intronENST00000384147ENST00000456666SNHG1chr11

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intron-intronENST00000384147ENST00000546633SNHG1chr11

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intron-intronENST00000384147ENST00000483957SNHG1chr11

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intron-intronENST00000384147ENST00000430703SNHG1chr11

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intron-intronENST00000384147ENST00000416863SNHG1chr11

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intron-intronENST00000384147ENST00000413678SNHG1chr11

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intron-intronENST00000384147ENST00000414440SNHG1chr11

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intron-intronENST00000384147ENST00000547489SNHG1chr11

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intron-intronENST00000384147ENST00000551031SNHG1chr11

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intron-intronENST00000384147ENST00000468089SNHG1chr11

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intron-intronENST00000384147ENST00000400293SNHG1chr11

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intron-intronENST00000384147ENST00000400296SNHG1chr11

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intron-intronENST00000384147ENST00000400295SNHG1chr11

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intron-intronENST00000384147ENST00000383508SNHG1chr11

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intron-intronENST00000384147ENST00000548340SNHG1chr11

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intron-intronENST00000384147ENST00000548331SNHG1chr11

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intron-intronENST00000384147ENST00000495391SNHG1chr11

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intron-intronENST00000384147ENST00000446341SNHG1chr11

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intron-intronENST00000384147ENST00000548614SNHG1chr11

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intron-intronENST00000384147ENST00000448296SNHG1chr11

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intron-intronENST00000384147ENST00000412330SNHG1chr11

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intron-intronENST00000384147ENST00000445218SNHG1chr11

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intron-intronENST00000384147ENST00000546637SNHG1chr11

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intron-intronENST00000384147ENST00000489325SNHG1chr11

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intron-intronENST00000384147ENST00000450987SNHG1chr11

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intron-intronENST00000384147ENST00000431360SNHG1chr11

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intron-intronENST00000384147ENST00000430784SNHG1chr11

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intron-intronENST00000384147ENST00000550217SNHG1chr11

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intron-intronENST00000384147ENST00000470514SNHG1chr11

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intron-intronENST00000384147ENST00000549374SNHG1chr11

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intron-3CDSENST00000365607ENST00000376177SNHG1chr11

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intron-3CDSENST00000365607ENST00000396172SNHG1chr11

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intron-3CDSENST00000365607ENST00000417556SNHG1chr11

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intron-3CDSENST00000365607ENST00000458640SNHG1chr11

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intron-intronENST00000365607ENST00000462421SNHG1chr11

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intron-intronENST00000365607ENST00000415382SNHG1chr11

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intron-intronENST00000365607ENST00000453105SNHG1chr11

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intron-intronENST00000365607ENST00000449074SNHG1chr11

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intron-intronENST00000365607ENST00000552820SNHG1chr11

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intron-intronENST00000365607ENST00000463430SNHG1chr11

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intron-intronENST00000365607ENST00000438578SNHG1chr11

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intron-intronENST00000365607ENST00000415689SNHG1chr11

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intron-intronENST00000365607ENST00000456476SNHG1chr11

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intron-intronENST00000365607ENST00000412106SNHG1chr11

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intron-intronENST00000365607ENST00000547039SNHG1chr11

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intron-intronENST00000365607ENST00000550435SNHG1chr11

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intron-intronENST00000365607ENST00000453488SNHG1chr11

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intron-intronENST00000365607ENST00000453138SNHG1chr11

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intron-intronENST00000365607ENST00000552288SNHG1chr11

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intron-intronENST00000365607ENST00000441425SNHG1chr11

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intron-intronENST00000365607ENST00000456666SNHG1chr11

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intron-intronENST00000365607ENST00000546633SNHG1chr11

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intron-intronENST00000365607ENST00000483957SNHG1chr11

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intron-intronENST00000365607ENST00000430703SNHG1chr11

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intron-intronENST00000365607ENST00000416863SNHG1chr11

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intron-intronENST00000365607ENST00000413678SNHG1chr11

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intron-intronENST00000365607ENST00000414440SNHG1chr11

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intron-intronENST00000365607ENST00000547489SNHG1chr11

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intron-intronENST00000365607ENST00000551031SNHG1chr11

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intron-intronENST00000365607ENST00000468089SNHG1chr11

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intron-intronENST00000365607ENST00000400293SNHG1chr11

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intron-intronENST00000365607ENST00000400296SNHG1chr11

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intron-intronENST00000365607ENST00000400295SNHG1chr11

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intron-intronENST00000365607ENST00000383508SNHG1chr11

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intron-intronENST00000365607ENST00000548340SNHG1chr11

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intron-intronENST00000365607ENST00000548331SNHG1chr11

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intron-intronENST00000365607ENST00000495391SNHG1chr11

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intron-intronENST00000365607ENST00000446341SNHG1chr11

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intron-intronENST00000365607ENST00000548614SNHG1chr11

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intron-intronENST00000365607ENST00000448296SNHG1chr11

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intron-intronENST00000365607ENST00000412330SNHG1chr11

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intron-intronENST00000365607ENST00000445218SNHG1chr11

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intron-intronENST00000365607ENST00000546637SNHG1chr11

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intron-intronENST00000365607ENST00000489325SNHG1chr11

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intron-intronENST00000365607ENST00000450987SNHG1chr11

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intron-intronENST00000365607ENST00000431360SNHG1chr11

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intron-intronENST00000365607ENST00000430784SNHG1chr11

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intron-intronENST00000365607ENST00000550217SNHG1chr11

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intron-intronENST00000365607ENST00000470514SNHG1chr11

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intron-intronENST00000365607ENST00000549374SNHG1chr11

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check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score

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Fusion Genomic Features for SNHG1-DDX39B


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

Top

Fusion Protein Features for SNHG1-DDX39B


check button Go to

FGviewer for the breakpoints of :-:

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.DDX39B

Q13838

FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Involved in nuclear export of spliced and unspliced mRNA. Assembling component of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pathway. May undergo several rounds of ATP hydrolysis during assembly of TREX to drive subsequent loading of components such as ALYREF/THOC and CHTOP onto mRNA. Also associates with pre-mRNA independent of ALYREF/THOC4 and the THO complex. Involved in the nuclear export of intronless mRNA; the ATP-bound form is proposed to recruit export adapter ALYREF/THOC4 to intronless mRNA; its ATPase activity is cooperatively stimulated by RNA and ALYREF/THOC4 and ATP hydrolysis is thought to trigger the dissociation from RNA to allow the association of ALYREF/THOC4 and the NXF1-NXT1 heterodimer. Involved in transcription elongation and genome stability. {ECO:0000269|PubMed:11675789, ECO:0000269|PubMed:15585580, ECO:0000269|PubMed:15833825, ECO:0000269|PubMed:15998806, ECO:0000269|PubMed:17190602, ECO:0000269|PubMed:17562711, ECO:0000269|PubMed:17984224, ECO:0000269|PubMed:20844015, ECO:0000269|PubMed:22144908, ECO:0000269|PubMed:23222130, ECO:0000269|PubMed:23299939, ECO:0000269|PubMed:9242493}.; FUNCTION: Splice factor that is required for the first ATP-dependent step in spliceosome assembly and for the interaction of U2 snRNP with the branchpoint. Has both RNA-stimulated ATP binding/hydrolysis activity and ATP-dependent RNA unwinding activity. Even with the stimulation of RNA, the ATPase activity is weak. Can only hydrolyze ATP but not other NTPs. The RNA stimulation of ATPase activity does not have a strong preference for the sequence and length of the RNA. However, ssRNA stimulates the ATPase activity much more strongly than dsRNA. Can unwind 5' or 3' overhangs or blunt end RNA duplexes in vitro. The ATPase and helicase activities are not influenced by U2AF2; the effect of ALYREF/THOC4 is reported conflictingly with [PubMed:23299939] reporting a stimulatory effect. {ECO:0000269|PubMed:23299939, ECO:0000269|PubMed:9242493}.; FUNCTION: (Microbial infection) The TREX complex is essential for the export of Kaposi's sarcoma-associated herpesvirus (KSHV) intronless mRNAs and infectious virus production. {ECO:0000269|PubMed:18974867}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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Fusion Gene Sequence for SNHG1-DDX39B


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.

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Fusion Gene PPI Analysis for SNHG1-DDX39B


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for SNHG1-DDX39B


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for SNHG1-DDX39B


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource