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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:SOX6-BTBD10 (FusionGDB2 ID:84756)

Fusion Gene Summary for SOX6-BTBD10

check button Fusion gene summary
Fusion gene informationFusion gene name: SOX6-BTBD10
Fusion gene ID: 84756
HgeneTgene
Gene symbol

SOX6

BTBD10

Gene ID

55553

84280

Gene nameSRY-box transcription factor 6BTB domain containing 10
SynonymsHSSOX6|SOXDGMRP-1|GMRP1
Cytomap

11p15.2

11p15.3

Type of geneprotein-codingprotein-coding
Descriptiontranscription factor SOX-6SRY (sex determining region Y)-box 6SRY-box 6SRY-box containing gene 6BTB/POZ domain-containing protein 10BTB (POZ) domain containing 10BTB (broad-complex tramtrack and bric-a-brac/pox virus and zinc finger) domain-containing protein 10K+ channel tetramerization proteinepididymis secretory sperm binding proteinglucose
Modification date2020031320200327
UniProtAcc.

Q9BSF8

Ensembl transtripts involved in fusion geneENST00000316399, ENST00000396356, 
ENST00000352083, ENST00000528252, 
ENST00000527619, ENST00000528429, 
ENST00000533658, 		ENST00000278174, 
ENST00000530907, ENST00000528120, 
ENST00000532261, 
Fusion gene scores* DoF score13 X 12 X 8=12486 X 5 X 4=120
# samples 146
** MAII scorelog2(14/1248*10)=-3.15611920191728
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(6/120*10)=-1
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: SOX6 [Title/Abstract] AND BTBD10 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointSOX6(16339992)-BTBD10(13427403), # samples:3
Anticipated loss of major functional domain due to fusion event.SOX6-BTBD10 seems lost the major protein functional domain in Hgene partner, which is a transcription factor due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneSOX6

GO:0032332

positive regulation of chondrocyte differentiation

21401405

HgeneSOX6

GO:0061036

positive regulation of cartilage development

21401405

HgeneSOX6

GO:0071560

cellular response to transforming growth factor beta stimulus

21401405

HgeneSOX6

GO:2000741

positive regulation of mesenchymal stem cell differentiation

21401405


check buttonFusion gene breakpoints across SOX6 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across BTBD10 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4KICHTCGA-KL-8339-01ASOX6chr11

16339992

-BTBD10chr11

13427403

-
ChimerDB4KICHTCGA-KL-8339-01ASOX6chr11

16339992

-BTBD10chr11

13427403

-
ChimerDB4KICHTCGA-KL-8339-01ASOX6chr11

16339992

-BTBD10chr11

13410688

-
ChimerDB4KICHTCGA-KL-8339-01ASOX6chr11

16339992

-BTBD10chr11

13427403

-


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Fusion Gene ORF analysis for SOX6-BTBD10

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000316399ENST00000278174SOX6chr11

16339992

-BTBD10chr11

13427403

-
In-frameENST00000316399ENST00000530907SOX6chr11

16339992

-BTBD10chr11

13427403

-
In-frameENST00000316399ENST00000528120SOX6chr11

16339992

-BTBD10chr11

13427403

-
5CDS-intronENST00000316399ENST00000532261SOX6chr11

16339992

-BTBD10chr11

13427403

-
In-frameENST00000396356ENST00000278174SOX6chr11

16339992

-BTBD10chr11

13427403

-
In-frameENST00000396356ENST00000530907SOX6chr11

16339992

-BTBD10chr11

13427403

-
In-frameENST00000396356ENST00000528120SOX6chr11

16339992

-BTBD10chr11

13427403

-
5CDS-intronENST00000396356ENST00000532261SOX6chr11

16339992

-BTBD10chr11

13427403

-
In-frameENST00000352083ENST00000278174SOX6chr11

16339992

-BTBD10chr11

13427403

-
In-frameENST00000352083ENST00000530907SOX6chr11

16339992

-BTBD10chr11

13427403

-
In-frameENST00000352083ENST00000528120SOX6chr11

16339992

-BTBD10chr11

13427403

-
5CDS-intronENST00000352083ENST00000532261SOX6chr11

16339992

-BTBD10chr11

13427403

-
Frame-shiftENST00000528252ENST00000278174SOX6chr11

16339992

-BTBD10chr11

13427403

-
Frame-shiftENST00000528252ENST00000530907SOX6chr11

16339992

-BTBD10chr11

13427403

-
Frame-shiftENST00000528252ENST00000528120SOX6chr11

16339992

-BTBD10chr11

13427403

-
5CDS-intronENST00000528252ENST00000532261SOX6chr11

16339992

-BTBD10chr11

13427403

-
In-frameENST00000527619ENST00000278174SOX6chr11

16339992

-BTBD10chr11

13427403

-
In-frameENST00000527619ENST00000530907SOX6chr11

16339992

-BTBD10chr11

13427403

-
In-frameENST00000527619ENST00000528120SOX6chr11

16339992

-BTBD10chr11

13427403

-
5CDS-intronENST00000527619ENST00000532261SOX6chr11

16339992

-BTBD10chr11

13427403

-
Frame-shiftENST00000528429ENST00000278174SOX6chr11

16339992

-BTBD10chr11

13427403

-
Frame-shiftENST00000528429ENST00000530907SOX6chr11

16339992

-BTBD10chr11

13427403

-
Frame-shiftENST00000528429ENST00000528120SOX6chr11

16339992

-BTBD10chr11

13427403

-
5CDS-intronENST00000528429ENST00000532261SOX6chr11

16339992

-BTBD10chr11

13427403

-
intron-3CDSENST00000533658ENST00000278174SOX6chr11

16339992

-BTBD10chr11

13427403

-
intron-3CDSENST00000533658ENST00000530907SOX6chr11

16339992

-BTBD10chr11

13427403

-
intron-3CDSENST00000533658ENST00000528120SOX6chr11

16339992

-BTBD10chr11

13427403

-
intron-intronENST00000533658ENST00000532261SOX6chr11

16339992

-BTBD10chr11

13427403

-
In-frameENST00000316399ENST00000278174SOX6chr11

16339992

-BTBD10chr11

13410688

-
In-frameENST00000316399ENST00000530907SOX6chr11

16339992

-BTBD10chr11

13410688

-
Frame-shiftENST00000316399ENST00000528120SOX6chr11

16339992

-BTBD10chr11

13410688

-
5CDS-intronENST00000316399ENST00000532261SOX6chr11

16339992

-BTBD10chr11

13410688

-
In-frameENST00000396356ENST00000278174SOX6chr11

16339992

-BTBD10chr11

13410688

-
In-frameENST00000396356ENST00000530907SOX6chr11

16339992

-BTBD10chr11

13410688

-
Frame-shiftENST00000396356ENST00000528120SOX6chr11

16339992

-BTBD10chr11

13410688

-
5CDS-intronENST00000396356ENST00000532261SOX6chr11

16339992

-BTBD10chr11

13410688

-
In-frameENST00000352083ENST00000278174SOX6chr11

16339992

-BTBD10chr11

13410688

-
In-frameENST00000352083ENST00000530907SOX6chr11

16339992

-BTBD10chr11

13410688

-
Frame-shiftENST00000352083ENST00000528120SOX6chr11

16339992

-BTBD10chr11

13410688

-
5CDS-intronENST00000352083ENST00000532261SOX6chr11

16339992

-BTBD10chr11

13410688

-
Frame-shiftENST00000528252ENST00000278174SOX6chr11

16339992

-BTBD10chr11

13410688

-
Frame-shiftENST00000528252ENST00000530907SOX6chr11

16339992

-BTBD10chr11

13410688

-
In-frameENST00000528252ENST00000528120SOX6chr11

16339992

-BTBD10chr11

13410688

-
5CDS-intronENST00000528252ENST00000532261SOX6chr11

16339992

-BTBD10chr11

13410688

-
In-frameENST00000527619ENST00000278174SOX6chr11

16339992

-BTBD10chr11

13410688

-
In-frameENST00000527619ENST00000530907SOX6chr11

16339992

-BTBD10chr11

13410688

-
Frame-shiftENST00000527619ENST00000528120SOX6chr11

16339992

-BTBD10chr11

13410688

-
5CDS-intronENST00000527619ENST00000532261SOX6chr11

16339992

-BTBD10chr11

13410688

-
Frame-shiftENST00000528429ENST00000278174SOX6chr11

16339992

-BTBD10chr11

13410688

-
Frame-shiftENST00000528429ENST00000530907SOX6chr11

16339992

-BTBD10chr11

13410688

-
In-frameENST00000528429ENST00000528120SOX6chr11

16339992

-BTBD10chr11

13410688

-
5CDS-intronENST00000528429ENST00000532261SOX6chr11

16339992

-BTBD10chr11

13410688

-
intron-3CDSENST00000533658ENST00000278174SOX6chr11

16339992

-BTBD10chr11

13410688

-
intron-3CDSENST00000533658ENST00000530907SOX6chr11

16339992

-BTBD10chr11

13410688

-
intron-3CDSENST00000533658ENST00000528120SOX6chr11

16339992

-BTBD10chr11

13410688

-
intron-intronENST00000533658ENST00000532261SOX6chr11

16339992

-BTBD10chr11

13410688

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000316399SOX6chr1116339992-ENST00000278174BTBD10chr1113427403-191646601085361
ENST00000316399SOX6chr1116339992-ENST00000530907BTBD10chr1113427403-123446601085361
ENST00000316399SOX6chr1116339992-ENST00000528120BTBD10chr1113427403-121546601085361
ENST00000396356SOX6chr1116339992-ENST00000278174BTBD10chr1113427403-1973523391142367
ENST00000396356SOX6chr1116339992-ENST00000530907BTBD10chr1113427403-1291523391142367
ENST00000396356SOX6chr1116339992-ENST00000528120BTBD10chr1113427403-1272523391142367
ENST00000352083SOX6chr1116339992-ENST00000278174BTBD10chr1113427403-1973523391142367
ENST00000352083SOX6chr1116339992-ENST00000530907BTBD10chr1113427403-1291523391142367
ENST00000352083SOX6chr1116339992-ENST00000528120BTBD10chr1113427403-1272523391142367
ENST00000527619SOX6chr1116339992-ENST00000278174BTBD10chr1113427403-20876371831256357
ENST00000527619SOX6chr1116339992-ENST00000530907BTBD10chr1113427403-14056371831256357
ENST00000527619SOX6chr1116339992-ENST00000528120BTBD10chr1113427403-13866371831256357
ENST00000316399SOX6chr1116339992-ENST00000278174BTBD10chr1113410688-16074660776258
ENST00000316399SOX6chr1116339992-ENST00000530907BTBD10chr1113410688-9254660776258
ENST00000396356SOX6chr1116339992-ENST00000278174BTBD10chr1113410688-166452339833264
ENST00000396356SOX6chr1116339992-ENST00000530907BTBD10chr1113410688-98252339833264
ENST00000352083SOX6chr1116339992-ENST00000278174BTBD10chr1113410688-166452339833264
ENST00000352083SOX6chr1116339992-ENST00000530907BTBD10chr1113410688-98252339833264
ENST00000528252SOX6chr1116339992-ENST00000528120BTBD10chr1113410688-107663677946289
ENST00000527619SOX6chr1116339992-ENST00000278174BTBD10chr1113410688-1778637183947254
ENST00000527619SOX6chr1116339992-ENST00000530907BTBD10chr1113410688-1096637183947254
ENST00000528429SOX6chr1116339992-ENST00000528120BTBD10chr1113410688-95351314823269

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000316399ENST00000278174SOX6chr1116339992-BTBD10chr1113427403-0.0003549530.999645
ENST00000316399ENST00000530907SOX6chr1116339992-BTBD10chr1113427403-0.0010581890.99894184
ENST00000316399ENST00000528120SOX6chr1116339992-BTBD10chr1113427403-0.0010997110.9989003
ENST00000396356ENST00000278174SOX6chr1116339992-BTBD10chr1113427403-0.0003414860.99965847
ENST00000396356ENST00000530907SOX6chr1116339992-BTBD10chr1113427403-0.0008263990.9991736
ENST00000396356ENST00000528120SOX6chr1116339992-BTBD10chr1113427403-0.0008455140.99915445
ENST00000352083ENST00000278174SOX6chr1116339992-BTBD10chr1113427403-0.0003414860.99965847
ENST00000352083ENST00000530907SOX6chr1116339992-BTBD10chr1113427403-0.0008263990.9991736
ENST00000352083ENST00000528120SOX6chr1116339992-BTBD10chr1113427403-0.0008455140.99915445
ENST00000527619ENST00000278174SOX6chr1116339992-BTBD10chr1113427403-0.0003417970.9996582
ENST00000527619ENST00000530907SOX6chr1116339992-BTBD10chr1113427403-0.0008601080.9991399
ENST00000527619ENST00000528120SOX6chr1116339992-BTBD10chr1113427403-0.0009038860.99909616
ENST00000316399ENST00000278174SOX6chr1116339992-BTBD10chr1113410688-0.001046050.99895394
ENST00000316399ENST00000530907SOX6chr1116339992-BTBD10chr1113410688-0.002526860.99747306
ENST00000396356ENST00000278174SOX6chr1116339992-BTBD10chr1113410688-0.0009901960.9990097
ENST00000396356ENST00000530907SOX6chr1116339992-BTBD10chr1113410688-0.002561470.99743855
ENST00000352083ENST00000278174SOX6chr1116339992-BTBD10chr1113410688-0.0009901960.9990097
ENST00000352083ENST00000530907SOX6chr1116339992-BTBD10chr1113410688-0.002561470.99743855
ENST00000528252ENST00000528120SOX6chr1116339992-BTBD10chr1113410688-0.0021517040.9978483
ENST00000527619ENST00000278174SOX6chr1116339992-BTBD10chr1113410688-0.0019117140.9980883
ENST00000527619ENST00000530907SOX6chr1116339992-BTBD10chr1113410688-0.0045423050.99545777
ENST00000528429ENST00000528120SOX6chr1116339992-BTBD10chr1113410688-0.0017435030.9982565

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Fusion Genomic Features for SOX6-BTBD10


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for SOX6-BTBD10


check button Go to

FGviewer for the breakpoints of chr11:16339992-chr11:13427403

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.BTBD10

Q9BSF8

FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Plays a major role as an activator of AKT family members by inhibiting PPP2CA-mediated dephosphorylation, thereby keeping AKTs activated. Plays a role in preventing motor neuronal death and accelerating the growth of pancreatic beta cells. {ECO:0000250|UniProtKB:Q80X66}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSOX6chr11:16339992chr11:13410688ENST00000316399-215184_262148.33333333333334809.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16339992chr11:13410688ENST00000352083-316184_262148.33333333333334829.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16339992chr11:13410688ENST00000396356-316184_262148.33333333333334809.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16339992chr11:13410688ENST00000527619-315184_262151.33333333333334805.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16339992chr11:13410688ENST00000528252-315184_262148.33333333333334802.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16339992chr11:13410688ENST00000528429-316184_262148.33333333333334829.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16339992chr11:13427403ENST00000316399-215184_262148.33333333333334809.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16339992chr11:13427403ENST00000352083-316184_262148.33333333333334829.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16339992chr11:13427403ENST00000396356-316184_262148.33333333333334809.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16339992chr11:13427403ENST00000527619-315184_262151.33333333333334805.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16339992chr11:13427403ENST00000528252-315184_262148.33333333333334802.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16339992chr11:13427403ENST00000528429-316184_262148.33333333333334829.0Coiled coilOntology_term=ECO:0000255
HgeneSOX6chr11:16339992chr11:13410688ENST00000316399-215219_261148.33333333333334809.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16339992chr11:13410688ENST00000316399-215280_285148.33333333333334809.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13410688ENST00000316399-215313_317148.33333333333334809.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13410688ENST00000352083-316219_261148.33333333333334829.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16339992chr11:13410688ENST00000352083-316280_285148.33333333333334829.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13410688ENST00000352083-316313_317148.33333333333334829.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13410688ENST00000396356-316219_261148.33333333333334809.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16339992chr11:13410688ENST00000396356-316280_285148.33333333333334809.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13410688ENST00000396356-316313_317148.33333333333334809.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13410688ENST00000527619-315219_261151.33333333333334805.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16339992chr11:13410688ENST00000527619-315280_285151.33333333333334805.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13410688ENST00000527619-315313_317151.33333333333334805.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13410688ENST00000528252-315219_261148.33333333333334802.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16339992chr11:13410688ENST00000528252-315280_285148.33333333333334802.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13410688ENST00000528252-315313_317148.33333333333334802.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13410688ENST00000528429-316219_261148.33333333333334829.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16339992chr11:13410688ENST00000528429-316280_285148.33333333333334829.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13410688ENST00000528429-316313_317148.33333333333334829.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13427403ENST00000316399-215219_261148.33333333333334809.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16339992chr11:13427403ENST00000316399-215280_285148.33333333333334809.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13427403ENST00000316399-215313_317148.33333333333334809.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13427403ENST00000352083-316219_261148.33333333333334829.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16339992chr11:13427403ENST00000352083-316280_285148.33333333333334829.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13427403ENST00000352083-316313_317148.33333333333334829.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13427403ENST00000396356-316219_261148.33333333333334809.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16339992chr11:13427403ENST00000396356-316280_285148.33333333333334809.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13427403ENST00000396356-316313_317148.33333333333334809.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13427403ENST00000527619-315219_261151.33333333333334805.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16339992chr11:13427403ENST00000527619-315280_285151.33333333333334805.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13427403ENST00000527619-315313_317151.33333333333334805.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13427403ENST00000528252-315219_261148.33333333333334802.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16339992chr11:13427403ENST00000528252-315280_285148.33333333333334802.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13427403ENST00000528252-315313_317148.33333333333334802.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13427403ENST00000528429-316219_261148.33333333333334829.0Compositional biasNote=Gln-rich
HgeneSOX6chr11:16339992chr11:13427403ENST00000528429-316280_285148.33333333333334829.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13427403ENST00000528429-316313_317148.33333333333334829.0Compositional biasNote=Poly-Ala
HgeneSOX6chr11:16339992chr11:13410688ENST00000316399-215621_689148.33333333333334809.0DNA bindingHMG box
HgeneSOX6chr11:16339992chr11:13410688ENST00000352083-316621_689148.33333333333334829.0DNA bindingHMG box
HgeneSOX6chr11:16339992chr11:13410688ENST00000396356-316621_689148.33333333333334809.0DNA bindingHMG box
HgeneSOX6chr11:16339992chr11:13410688ENST00000527619-315621_689151.33333333333334805.0DNA bindingHMG box
HgeneSOX6chr11:16339992chr11:13410688ENST00000528252-315621_689148.33333333333334802.0DNA bindingHMG box
HgeneSOX6chr11:16339992chr11:13410688ENST00000528429-316621_689148.33333333333334829.0DNA bindingHMG box
HgeneSOX6chr11:16339992chr11:13427403ENST00000316399-215621_689148.33333333333334809.0DNA bindingHMG box
HgeneSOX6chr11:16339992chr11:13427403ENST00000352083-316621_689148.33333333333334829.0DNA bindingHMG box
HgeneSOX6chr11:16339992chr11:13427403ENST00000396356-316621_689148.33333333333334809.0DNA bindingHMG box
HgeneSOX6chr11:16339992chr11:13427403ENST00000527619-315621_689151.33333333333334805.0DNA bindingHMG box
HgeneSOX6chr11:16339992chr11:13427403ENST00000528252-315621_689148.33333333333334802.0DNA bindingHMG box
HgeneSOX6chr11:16339992chr11:13427403ENST00000528429-316621_689148.33333333333334829.0DNA bindingHMG box
TgeneBTBD10chr11:16339992chr11:13410688ENST0000027817479106_142372.3333333333333476.0Compositional biasNote=Ser-rich
TgeneBTBD10chr11:16339992chr11:13427403ENST0000027817459106_142269.3333333333333476.0Compositional biasNote=Ser-rich
TgeneBTBD10chr11:16339992chr11:13410688ENST0000027817479167_241372.3333333333333476.0DomainNote=BTB
TgeneBTBD10chr11:16339992chr11:13427403ENST0000027817459167_241269.3333333333333476.0DomainNote=BTB


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Fusion Gene Sequence for SOX6-BTBD10


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000316399_ENST00000278174_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(transcript)=1916nt_BP=466nt
CTGTTTTTTTTCTGCAGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGAT
TTAACCTCAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCT
GAGGAGCTACCAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAAT
AATAAGTTATGTTCCCTATATTCCTTCCGAAATACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACC
AGTGTTACTTTTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACT
CGGACTGAACAAGAGGGTGCCCTAATGCATGAGTTATCAAATGATGGTGCTCGTAGACAATTTGAATTTTATCTGGAAGAAATGATCCTC
CCTCTCATGGTAGCTAGTGCCCAGAGTGGGGAACGGGAATGTCATATAGTGGTGCTTACAGATGATGATGTGGTTGATTGGGATGAAGAA
TATCCACCACAGATGGGAGAAGAATATTCACAAATTATTTATAGCACAAAATTATATAGATTTTTCAAGTATATTGAAAACAGAGATGTG
GCCAAGTCAGTTTTGAAGGAGAGGGGTCTTAAGAAGATTAGATTGGGAATAGAAGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGG
CCTGGAGGCCGCCCAGAAGTGATCTACAACTATGTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCAT
GTAGACTTTCAGTGTGTAAAGAGTAAATCTATCACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCAT
CCAACTCCACAAGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATG
CTGTGATGCTGATCTTCCTTGAAACCATAGCATGCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGCACTGCAAGGCCACTCTTC
TTCATTGTGAGATGCACATAACAATGTTTAGGATATTGCAGTGTAGGCTTTTTTAAAGACCAAAGGTAGCTGAATGGTTTTTTTTTAAAT
GAGTACAACTCTAGCATTTTGAAGTTCCAGTTGTAAATGTATTTGTTTACCAGTAGGTTTGTGAAATTGGTTCTTTGTATGGGGGATGGT
CCTTTTTCACACAGCTAGGTCTTTTCAGAAGTGGTGGAAATTGGCAGCTGGGGTACTTTCAGTTTGGACTGATATTCATCACACCTCAGA
TAAAATGCAGAGTAATATATAGTTGCACTTTATAAATGGTGGTTAAATGGAAATGTTCAAGCCATTTTATAGTTGTGATGCACAATATAA
TTTAAGTGCTTCTGTCAAAGTATTCCTCCAGTACAATTTGTATAGTTTGCTGCCCTTGATGAGCAAAAAGTATTTATCTTGGGCTTATCT
GAATGATCAGGATGAGATTTAATGCCCATATCTTACCAGTTCAGTTATCTCCAGAGCCATTTCACCCTTTAGAGTGAGTCACATGCAGGG
AGTGTGAATGTCAGAGGTGGTTTATTATCCAGTCTGCCTTACCCTTAATCTGTTCACAGATATTTATTTACTAATGCTTTTTTTTTCTTA
AGAGTTATGGGATAGGAAAATGAAGTGTTTGCTCTTCATTTACTAAATGATTGTAAACTTGAGTTTTTCATCAAAATAAAATTCCATTGT

>In-frame_ENST00000316399_ENST00000278174_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(amino acids)=361AA_start in transcript=0_stop in transcript=1085
LFFFCRRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESEN
NKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGALMHELSNDGARRQFEFYLEEMIL
PLMVASAQSGERECHIVVLTDDDVVDWDEEYPPQMGEEYSQIIYSTKLYRFFKYIENRDVAKSVLKERGLKKIRLGIEGYPTYKEKVKKR
PGGRPEVIYNYVQRPFIRMSWEKEEGKSRHVDFQCVKSKSITNLAAAAADIPQDQLVVMHPTPQVDELDILPIHPPSGNSDLDPDAQNPM

--------------------------------------------------------------
>In-frame_ENST00000316399_ENST00000530907_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(transcript)=1234nt_BP=466nt
CTGTTTTTTTTCTGCAGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGAT
TTAACCTCAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCT
GAGGAGCTACCAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAAT
AATAAGTTATGTTCCCTATATTCCTTCCGAAATACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACC
AGTGTTACTTTTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACT
CGGACTGAACAAGAGGGTGCCCTAATGCATGAGTTATCAAATGATGGTGCTCGTAGACAATTTGAATTTTATCTGGAAGAAATGATCCTC
CCTCTCATGGTAGCTAGTGCCCAGAGTGGGGAACGGGAATGTCATATAGTGGTGCTTACAGATGATGATGTGGTTGATTGGGATGAAGAA
TATCCACCACAGATGGGAGAAGAATATTCACAAATTATTTATAGCACAAAATTATATAGATTTTTCAAGTATATTGAAAACAGAGATGTG
GCCAAGTCAGTTTTGAAGGAGAGGGGTCTTAAGAAGATTAGATTGGGAATAGAAGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGG
CCTGGAGGCCGCCCAGAAGTGATCTACAACTATGTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCAT
GTAGACTTTCAGTGTGTAAAGAGTAAATCTATCACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCAT
CCAACTCCACAAGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATG
CTGTGATGCTGATCTTCCTTGAAACCATAGCATGCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGCACTGCAAGGCCACTCTTC

>In-frame_ENST00000316399_ENST00000530907_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(amino acids)=361AA_start in transcript=0_stop in transcript=1085
LFFFCRRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESEN
NKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGALMHELSNDGARRQFEFYLEEMIL
PLMVASAQSGERECHIVVLTDDDVVDWDEEYPPQMGEEYSQIIYSTKLYRFFKYIENRDVAKSVLKERGLKKIRLGIEGYPTYKEKVKKR
PGGRPEVIYNYVQRPFIRMSWEKEEGKSRHVDFQCVKSKSITNLAAAAADIPQDQLVVMHPTPQVDELDILPIHPPSGNSDLDPDAQNPM

--------------------------------------------------------------
>In-frame_ENST00000316399_ENST00000528120_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(transcript)=1215nt_BP=466nt
CTGTTTTTTTTCTGCAGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGAT
TTAACCTCAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCT
GAGGAGCTACCAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAAT
AATAAGTTATGTTCCCTATATTCCTTCCGAAATACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACC
AGTGTTACTTTTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACT
CGGACTGAACAAGAGGGTGCCCTAATGCATGAGTTATCAAATGATGGTGCTCGTAGACAATTTGAATTTTATCTGGAAGAAATGATCCTC
CCTCTCATGGTAGCTAGTGCCCAGAGTGGGGAACGGGAATGTCATATAGTGGTGCTTACAGATGATGATGTGGTTGATTGGGATGAAGAA
TATCCACCACAGATGGGAGAAGAATATTCACAAATTATTTATAGCACAAAATTATATAGATTTTTCAAGTATATTGAAAACAGAGATGTG
GCCAAGTCAGTTTTGAAGGAGAGGGGTCTTAAGAAGATTAGATTGGGAATAGAAGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGG
CCTGGAGGCCGCCCAGAAGTGATCTACAACTATGTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCAT
GTAGACTTTCAGTGTGTAAAGAGTAAATCTATCACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCAT
CCAACTCCACAAGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATG
CTGTGATGCTGATCTTCCTTGAAACCATAGCATGCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGCACTGCAAGGCCACTCTTC

>In-frame_ENST00000316399_ENST00000528120_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(amino acids)=361AA_start in transcript=0_stop in transcript=1085
LFFFCRRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESEN
NKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGALMHELSNDGARRQFEFYLEEMIL
PLMVASAQSGERECHIVVLTDDDVVDWDEEYPPQMGEEYSQIIYSTKLYRFFKYIENRDVAKSVLKERGLKKIRLGIEGYPTYKEKVKKR
PGGRPEVIYNYVQRPFIRMSWEKEEGKSRHVDFQCVKSKSITNLAAAAADIPQDQLVVMHPTPQVDELDILPIHPPSGNSDLDPDAQNPM

--------------------------------------------------------------
>In-frame_ENST00000396356_ENST00000278174_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(transcript)=1973nt_BP=523nt
GTCACTTTCATGAATTCAAAGGCAATTTACCAGTGATTTCTGGGTGCTGGGGCTGATATTTTTTGTGCATATTTAAGAATGTCTTCCAAG
CAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGAT
CAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAA
CAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTATGTTCCCTATATTCCTTCCGAAAT
ACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACTTTTGGAACCCCAGAGCGCCGCAAA
GGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAACAAGAGGGTGCCCTAATGCATGAG
TTATCAAATGATGGTGCTCGTAGACAATTTGAATTTTATCTGGAAGAAATGATCCTCCCTCTCATGGTAGCTAGTGCCCAGAGTGGGGAA
CGGGAATGTCATATAGTGGTGCTTACAGATGATGATGTGGTTGATTGGGATGAAGAATATCCACCACAGATGGGAGAAGAATATTCACAA
ATTATTTATAGCACAAAATTATATAGATTTTTCAAGTATATTGAAAACAGAGATGTGGCCAAGTCAGTTTTGAAGGAGAGGGGTCTTAAG
AAGATTAGATTGGGAATAGAAGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTAT
GTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATC
ACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCAACTCCACAAGTGGATGAGCTGGATATTCTC
CCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATGCTGTGATGCTGATCTTCCTTGAAACCATAGCAT
GCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGCACTGCAAGGCCACTCTTCTTCATTGTGAGATGCACATAACAATGTTTAGGA
TATTGCAGTGTAGGCTTTTTTAAAGACCAAAGGTAGCTGAATGGTTTTTTTTTAAATGAGTACAACTCTAGCATTTTGAAGTTCCAGTTG
TAAATGTATTTGTTTACCAGTAGGTTTGTGAAATTGGTTCTTTGTATGGGGGATGGTCCTTTTTCACACAGCTAGGTCTTTTCAGAAGTG
GTGGAAATTGGCAGCTGGGGTACTTTCAGTTTGGACTGATATTCATCACACCTCAGATAAAATGCAGAGTAATATATAGTTGCACTTTAT
AAATGGTGGTTAAATGGAAATGTTCAAGCCATTTTATAGTTGTGATGCACAATATAATTTAAGTGCTTCTGTCAAAGTATTCCTCCAGTA
CAATTTGTATAGTTTGCTGCCCTTGATGAGCAAAAAGTATTTATCTTGGGCTTATCTGAATGATCAGGATGAGATTTAATGCCCATATCT
TACCAGTTCAGTTATCTCCAGAGCCATTTCACCCTTTAGAGTGAGTCACATGCAGGGAGTGTGAATGTCAGAGGTGGTTTATTATCCAGT
CTGCCTTACCCTTAATCTGTTCACAGATATTTATTTACTAATGCTTTTTTTTTCTTAAGAGTTATGGGATAGGAAAATGAAGTGTTTGCT

>In-frame_ENST00000396356_ENST00000278174_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(amino acids)=367AA_start in transcript=39_stop in transcript=1142
MGAGADIFCAYLRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQ
RMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGALMHELSNDGARRQFEFY
LEEMILPLMVASAQSGERECHIVVLTDDDVVDWDEEYPPQMGEEYSQIIYSTKLYRFFKYIENRDVAKSVLKERGLKKIRLGIEGYPTYK
EKVKKRPGGRPEVIYNYVQRPFIRMSWEKEEGKSRHVDFQCVKSKSITNLAAAAADIPQDQLVVMHPTPQVDELDILPIHPPSGNSDLDP

--------------------------------------------------------------
>In-frame_ENST00000396356_ENST00000530907_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(transcript)=1291nt_BP=523nt
GTCACTTTCATGAATTCAAAGGCAATTTACCAGTGATTTCTGGGTGCTGGGGCTGATATTTTTTGTGCATATTTAAGAATGTCTTCCAAG
CAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGAT
CAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAA
CAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTATGTTCCCTATATTCCTTCCGAAAT
ACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACTTTTGGAACCCCAGAGCGCCGCAAA
GGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAACAAGAGGGTGCCCTAATGCATGAG
TTATCAAATGATGGTGCTCGTAGACAATTTGAATTTTATCTGGAAGAAATGATCCTCCCTCTCATGGTAGCTAGTGCCCAGAGTGGGGAA
CGGGAATGTCATATAGTGGTGCTTACAGATGATGATGTGGTTGATTGGGATGAAGAATATCCACCACAGATGGGAGAAGAATATTCACAA
ATTATTTATAGCACAAAATTATATAGATTTTTCAAGTATATTGAAAACAGAGATGTGGCCAAGTCAGTTTTGAAGGAGAGGGGTCTTAAG
AAGATTAGATTGGGAATAGAAGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTAT
GTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATC
ACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCAACTCCACAAGTGGATGAGCTGGATATTCTC
CCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATGCTGTGATGCTGATCTTCCTTGAAACCATAGCAT
GCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGCACTGCAAGGCCACTCTTCTTCATTGTGAGATGCACATAACAATGTTTAGGA

>In-frame_ENST00000396356_ENST00000530907_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(amino acids)=367AA_start in transcript=39_stop in transcript=1142
MGAGADIFCAYLRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQ
RMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGALMHELSNDGARRQFEFY
LEEMILPLMVASAQSGERECHIVVLTDDDVVDWDEEYPPQMGEEYSQIIYSTKLYRFFKYIENRDVAKSVLKERGLKKIRLGIEGYPTYK
EKVKKRPGGRPEVIYNYVQRPFIRMSWEKEEGKSRHVDFQCVKSKSITNLAAAAADIPQDQLVVMHPTPQVDELDILPIHPPSGNSDLDP

--------------------------------------------------------------
>In-frame_ENST00000396356_ENST00000528120_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(transcript)=1272nt_BP=523nt
GTCACTTTCATGAATTCAAAGGCAATTTACCAGTGATTTCTGGGTGCTGGGGCTGATATTTTTTGTGCATATTTAAGAATGTCTTCCAAG
CAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGAT
CAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAA
CAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTATGTTCCCTATATTCCTTCCGAAAT
ACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACTTTTGGAACCCCAGAGCGCCGCAAA
GGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAACAAGAGGGTGCCCTAATGCATGAG
TTATCAAATGATGGTGCTCGTAGACAATTTGAATTTTATCTGGAAGAAATGATCCTCCCTCTCATGGTAGCTAGTGCCCAGAGTGGGGAA
CGGGAATGTCATATAGTGGTGCTTACAGATGATGATGTGGTTGATTGGGATGAAGAATATCCACCACAGATGGGAGAAGAATATTCACAA
ATTATTTATAGCACAAAATTATATAGATTTTTCAAGTATATTGAAAACAGAGATGTGGCCAAGTCAGTTTTGAAGGAGAGGGGTCTTAAG
AAGATTAGATTGGGAATAGAAGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTAT
GTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATC
ACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCAACTCCACAAGTGGATGAGCTGGATATTCTC
CCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATGCTGTGATGCTGATCTTCCTTGAAACCATAGCAT
GCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGCACTGCAAGGCCACTCTTCTTCATTGTGAGATGCACATAACAATGTTTAGGA

>In-frame_ENST00000396356_ENST00000528120_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(amino acids)=367AA_start in transcript=39_stop in transcript=1142
MGAGADIFCAYLRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQ
RMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGALMHELSNDGARRQFEFY
LEEMILPLMVASAQSGERECHIVVLTDDDVVDWDEEYPPQMGEEYSQIIYSTKLYRFFKYIENRDVAKSVLKERGLKKIRLGIEGYPTYK
EKVKKRPGGRPEVIYNYVQRPFIRMSWEKEEGKSRHVDFQCVKSKSITNLAAAAADIPQDQLVVMHPTPQVDELDILPIHPPSGNSDLDP

--------------------------------------------------------------
>In-frame_ENST00000352083_ENST00000278174_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(transcript)=1973nt_BP=523nt
GTCACTTTCATGAATTCAAAGGCAATTTACCAGTGATTTCTGGGTGCTGGGGCTGATATTTTTTGTGCATATTTAAGAATGTCTTCCAAG
CAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGAT
CAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAA
CAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTATGTTCCCTATATTCCTTCCGAAAT
ACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACTTTTGGAACCCCAGAGCGCCGCAAA
GGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAACAAGAGGGTGCCCTAATGCATGAG
TTATCAAATGATGGTGCTCGTAGACAATTTGAATTTTATCTGGAAGAAATGATCCTCCCTCTCATGGTAGCTAGTGCCCAGAGTGGGGAA
CGGGAATGTCATATAGTGGTGCTTACAGATGATGATGTGGTTGATTGGGATGAAGAATATCCACCACAGATGGGAGAAGAATATTCACAA
ATTATTTATAGCACAAAATTATATAGATTTTTCAAGTATATTGAAAACAGAGATGTGGCCAAGTCAGTTTTGAAGGAGAGGGGTCTTAAG
AAGATTAGATTGGGAATAGAAGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTAT
GTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATC
ACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCAACTCCACAAGTGGATGAGCTGGATATTCTC
CCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATGCTGTGATGCTGATCTTCCTTGAAACCATAGCAT
GCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGCACTGCAAGGCCACTCTTCTTCATTGTGAGATGCACATAACAATGTTTAGGA
TATTGCAGTGTAGGCTTTTTTAAAGACCAAAGGTAGCTGAATGGTTTTTTTTTAAATGAGTACAACTCTAGCATTTTGAAGTTCCAGTTG
TAAATGTATTTGTTTACCAGTAGGTTTGTGAAATTGGTTCTTTGTATGGGGGATGGTCCTTTTTCACACAGCTAGGTCTTTTCAGAAGTG
GTGGAAATTGGCAGCTGGGGTACTTTCAGTTTGGACTGATATTCATCACACCTCAGATAAAATGCAGAGTAATATATAGTTGCACTTTAT
AAATGGTGGTTAAATGGAAATGTTCAAGCCATTTTATAGTTGTGATGCACAATATAATTTAAGTGCTTCTGTCAAAGTATTCCTCCAGTA
CAATTTGTATAGTTTGCTGCCCTTGATGAGCAAAAAGTATTTATCTTGGGCTTATCTGAATGATCAGGATGAGATTTAATGCCCATATCT
TACCAGTTCAGTTATCTCCAGAGCCATTTCACCCTTTAGAGTGAGTCACATGCAGGGAGTGTGAATGTCAGAGGTGGTTTATTATCCAGT
CTGCCTTACCCTTAATCTGTTCACAGATATTTATTTACTAATGCTTTTTTTTTCTTAAGAGTTATGGGATAGGAAAATGAAGTGTTTGCT

>In-frame_ENST00000352083_ENST00000278174_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(amino acids)=367AA_start in transcript=39_stop in transcript=1142
MGAGADIFCAYLRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQ
RMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGALMHELSNDGARRQFEFY
LEEMILPLMVASAQSGERECHIVVLTDDDVVDWDEEYPPQMGEEYSQIIYSTKLYRFFKYIENRDVAKSVLKERGLKKIRLGIEGYPTYK
EKVKKRPGGRPEVIYNYVQRPFIRMSWEKEEGKSRHVDFQCVKSKSITNLAAAAADIPQDQLVVMHPTPQVDELDILPIHPPSGNSDLDP

--------------------------------------------------------------
>In-frame_ENST00000352083_ENST00000530907_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(transcript)=1291nt_BP=523nt
GTCACTTTCATGAATTCAAAGGCAATTTACCAGTGATTTCTGGGTGCTGGGGCTGATATTTTTTGTGCATATTTAAGAATGTCTTCCAAG
CAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGAT
CAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAA
CAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTATGTTCCCTATATTCCTTCCGAAAT
ACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACTTTTGGAACCCCAGAGCGCCGCAAA
GGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAACAAGAGGGTGCCCTAATGCATGAG
TTATCAAATGATGGTGCTCGTAGACAATTTGAATTTTATCTGGAAGAAATGATCCTCCCTCTCATGGTAGCTAGTGCCCAGAGTGGGGAA
CGGGAATGTCATATAGTGGTGCTTACAGATGATGATGTGGTTGATTGGGATGAAGAATATCCACCACAGATGGGAGAAGAATATTCACAA
ATTATTTATAGCACAAAATTATATAGATTTTTCAAGTATATTGAAAACAGAGATGTGGCCAAGTCAGTTTTGAAGGAGAGGGGTCTTAAG
AAGATTAGATTGGGAATAGAAGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTAT
GTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATC
ACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCAACTCCACAAGTGGATGAGCTGGATATTCTC
CCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATGCTGTGATGCTGATCTTCCTTGAAACCATAGCAT
GCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGCACTGCAAGGCCACTCTTCTTCATTGTGAGATGCACATAACAATGTTTAGGA

>In-frame_ENST00000352083_ENST00000530907_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(amino acids)=367AA_start in transcript=39_stop in transcript=1142
MGAGADIFCAYLRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQ
RMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGALMHELSNDGARRQFEFY
LEEMILPLMVASAQSGERECHIVVLTDDDVVDWDEEYPPQMGEEYSQIIYSTKLYRFFKYIENRDVAKSVLKERGLKKIRLGIEGYPTYK
EKVKKRPGGRPEVIYNYVQRPFIRMSWEKEEGKSRHVDFQCVKSKSITNLAAAAADIPQDQLVVMHPTPQVDELDILPIHPPSGNSDLDP

--------------------------------------------------------------
>In-frame_ENST00000352083_ENST00000528120_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(transcript)=1272nt_BP=523nt
GTCACTTTCATGAATTCAAAGGCAATTTACCAGTGATTTCTGGGTGCTGGGGCTGATATTTTTTGTGCATATTTAAGAATGTCTTCCAAG
CAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGAT
CAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAA
CAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTATGTTCCCTATATTCCTTCCGAAAT
ACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACTTTTGGAACCCCAGAGCGCCGCAAA
GGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAACAAGAGGGTGCCCTAATGCATGAG
TTATCAAATGATGGTGCTCGTAGACAATTTGAATTTTATCTGGAAGAAATGATCCTCCCTCTCATGGTAGCTAGTGCCCAGAGTGGGGAA
CGGGAATGTCATATAGTGGTGCTTACAGATGATGATGTGGTTGATTGGGATGAAGAATATCCACCACAGATGGGAGAAGAATATTCACAA
ATTATTTATAGCACAAAATTATATAGATTTTTCAAGTATATTGAAAACAGAGATGTGGCCAAGTCAGTTTTGAAGGAGAGGGGTCTTAAG
AAGATTAGATTGGGAATAGAAGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTAT
GTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATC
ACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCAACTCCACAAGTGGATGAGCTGGATATTCTC
CCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATGCTGTGATGCTGATCTTCCTTGAAACCATAGCAT
GCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGCACTGCAAGGCCACTCTTCTTCATTGTGAGATGCACATAACAATGTTTAGGA

>In-frame_ENST00000352083_ENST00000528120_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(amino acids)=367AA_start in transcript=39_stop in transcript=1142
MGAGADIFCAYLRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQ
RMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGALMHELSNDGARRQFEFY
LEEMILPLMVASAQSGERECHIVVLTDDDVVDWDEEYPPQMGEEYSQIIYSTKLYRFFKYIENRDVAKSVLKERGLKKIRLGIEGYPTYK
EKVKKRPGGRPEVIYNYVQRPFIRMSWEKEEGKSRHVDFQCVKSKSITNLAAAAADIPQDQLVVMHPTPQVDELDILPIHPPSGNSDLDP

--------------------------------------------------------------
>In-frame_ENST00000527619_ENST00000278174_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(transcript)=2087nt_BP=637nt
GGGATAGGAAAGATGAAAGGTCATGGTGAGCTTCAAGGACATGAAAGGTTGTTGTCTCATGTAACAATAGTAGATTGTTTTTTTTCCTAA
TATTTCTAGCCAGCCCCTAAGTCAGGTGATGGAACAAATACCTACAGTTTAGTCAGGTGAAACAGGAGTGGGTGGAGGAAGGAAAGAAGA
AAAATGGGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCA
AGGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTA
CCAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTA
TGTTCCCTATATTCCTTCCGAAATACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACT
TTTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAA
CAAGAGGGTGCCCTAATGCATGAGTTATCAAATGATGGTGCTCGTAGACAATTTGAATTTTATCTGGAAGAAATGATCCTCCCTCTCATG
GTAGCTAGTGCCCAGAGTGGGGAACGGGAATGTCATATAGTGGTGCTTACAGATGATGATGTGGTTGATTGGGATGAAGAATATCCACCA
CAGATGGGAGAAGAATATTCACAAATTATTTATAGCACAAAATTATATAGATTTTTCAAGTATATTGAAAACAGAGATGTGGCCAAGTCA
GTTTTGAAGGAGAGGGGTCTTAAGAAGATTAGATTGGGAATAGAAGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGC
CGCCCAGAAGTGATCTACAACTATGTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTT
CAGTGTGTAAAGAGTAAATCTATCACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCAACTCCA
CAAGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATGCTGTGATGC
TGATCTTCCTTGAAACCATAGCATGCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGCACTGCAAGGCCACTCTTCTTCATTGTG
AGATGCACATAACAATGTTTAGGATATTGCAGTGTAGGCTTTTTTAAAGACCAAAGGTAGCTGAATGGTTTTTTTTTAAATGAGTACAAC
TCTAGCATTTTGAAGTTCCAGTTGTAAATGTATTTGTTTACCAGTAGGTTTGTGAAATTGGTTCTTTGTATGGGGGATGGTCCTTTTTCA
CACAGCTAGGTCTTTTCAGAAGTGGTGGAAATTGGCAGCTGGGGTACTTTCAGTTTGGACTGATATTCATCACACCTCAGATAAAATGCA
GAGTAATATATAGTTGCACTTTATAAATGGTGGTTAAATGGAAATGTTCAAGCCATTTTATAGTTGTGATGCACAATATAATTTAAGTGC
TTCTGTCAAAGTATTCCTCCAGTACAATTTGTATAGTTTGCTGCCCTTGATGAGCAAAAAGTATTTATCTTGGGCTTATCTGAATGATCA
GGATGAGATTTAATGCCCATATCTTACCAGTTCAGTTATCTCCAGAGCCATTTCACCCTTTAGAGTGAGTCACATGCAGGGAGTGTGAAT
GTCAGAGGTGGTTTATTATCCAGTCTGCCTTACCCTTAATCTGTTCACAGATATTTATTTACTAATGCTTTTTTTTTCTTAAGAGTTATG
GGATAGGAAAATGAAGTGTTTGCTCTTCATTTACTAAATGATTGTAAACTTGAGTTTTTCATCAAAATAAAATTCCATTGTTTTAATGTT

>In-frame_ENST00000527619_ENST00000278174_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(amino acids)=357AA_start in transcript=183_stop in transcript=1256
MGRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESENNKLC
SLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGALMHELSNDGARRQFEFYLEEMILPLMV
ASAQSGERECHIVVLTDDDVVDWDEEYPPQMGEEYSQIIYSTKLYRFFKYIENRDVAKSVLKERGLKKIRLGIEGYPTYKEKVKKRPGGR

--------------------------------------------------------------
>In-frame_ENST00000527619_ENST00000530907_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(transcript)=1405nt_BP=637nt
GGGATAGGAAAGATGAAAGGTCATGGTGAGCTTCAAGGACATGAAAGGTTGTTGTCTCATGTAACAATAGTAGATTGTTTTTTTTCCTAA
TATTTCTAGCCAGCCCCTAAGTCAGGTGATGGAACAAATACCTACAGTTTAGTCAGGTGAAACAGGAGTGGGTGGAGGAAGGAAAGAAGA
AAAATGGGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCA
AGGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTA
CCAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTA
TGTTCCCTATATTCCTTCCGAAATACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACT
TTTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAA
CAAGAGGGTGCCCTAATGCATGAGTTATCAAATGATGGTGCTCGTAGACAATTTGAATTTTATCTGGAAGAAATGATCCTCCCTCTCATG
GTAGCTAGTGCCCAGAGTGGGGAACGGGAATGTCATATAGTGGTGCTTACAGATGATGATGTGGTTGATTGGGATGAAGAATATCCACCA
CAGATGGGAGAAGAATATTCACAAATTATTTATAGCACAAAATTATATAGATTTTTCAAGTATATTGAAAACAGAGATGTGGCCAAGTCA
GTTTTGAAGGAGAGGGGTCTTAAGAAGATTAGATTGGGAATAGAAGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGC
CGCCCAGAAGTGATCTACAACTATGTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTT
CAGTGTGTAAAGAGTAAATCTATCACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCAACTCCA
CAAGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATGCTGTGATGC
TGATCTTCCTTGAAACCATAGCATGCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGCACTGCAAGGCCACTCTTCTTCATTGTG

>In-frame_ENST00000527619_ENST00000530907_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(amino acids)=357AA_start in transcript=183_stop in transcript=1256
MGRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESENNKLC
SLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGALMHELSNDGARRQFEFYLEEMILPLMV
ASAQSGERECHIVVLTDDDVVDWDEEYPPQMGEEYSQIIYSTKLYRFFKYIENRDVAKSVLKERGLKKIRLGIEGYPTYKEKVKKRPGGR

--------------------------------------------------------------
>In-frame_ENST00000527619_ENST00000528120_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(transcript)=1386nt_BP=637nt
GGGATAGGAAAGATGAAAGGTCATGGTGAGCTTCAAGGACATGAAAGGTTGTTGTCTCATGTAACAATAGTAGATTGTTTTTTTTCCTAA
TATTTCTAGCCAGCCCCTAAGTCAGGTGATGGAACAAATACCTACAGTTTAGTCAGGTGAAACAGGAGTGGGTGGAGGAAGGAAAGAAGA
AAAATGGGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCA
AGGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTA
CCAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTA
TGTTCCCTATATTCCTTCCGAAATACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACT
TTTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAA
CAAGAGGGTGCCCTAATGCATGAGTTATCAAATGATGGTGCTCGTAGACAATTTGAATTTTATCTGGAAGAAATGATCCTCCCTCTCATG
GTAGCTAGTGCCCAGAGTGGGGAACGGGAATGTCATATAGTGGTGCTTACAGATGATGATGTGGTTGATTGGGATGAAGAATATCCACCA
CAGATGGGAGAAGAATATTCACAAATTATTTATAGCACAAAATTATATAGATTTTTCAAGTATATTGAAAACAGAGATGTGGCCAAGTCA
GTTTTGAAGGAGAGGGGTCTTAAGAAGATTAGATTGGGAATAGAAGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGC
CGCCCAGAAGTGATCTACAACTATGTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTT
CAGTGTGTAAAGAGTAAATCTATCACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCAACTCCA
CAAGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATGCTGTGATGC
TGATCTTCCTTGAAACCATAGCATGCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGCACTGCAAGGCCACTCTTCTTCATTGTG

>In-frame_ENST00000527619_ENST00000528120_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13427403_length(amino acids)=357AA_start in transcript=183_stop in transcript=1256
MGRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESENNKLC
SLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGALMHELSNDGARRQFEFYLEEMILPLMV
ASAQSGERECHIVVLTDDDVVDWDEEYPPQMGEEYSQIIYSTKLYRFFKYIENRDVAKSVLKERGLKKIRLGIEGYPTYKEKVKKRPGGR

--------------------------------------------------------------
>In-frame_ENST00000316399_ENST00000278174_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(transcript)=1607nt_BP=466nt
CTGTTTTTTTTCTGCAGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGAT
TTAACCTCAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCT
GAGGAGCTACCAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAAT
AATAAGTTATGTTCCCTATATTCCTTCCGAAATACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACC
AGTGTTACTTTTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACT
CGGACTGAACAAGAGGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTATGTCCAA
AGACCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATCACCAAT
CTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCAACTCCACAAGTGGATGAGCTGGATATTCTCCCTATC
CATCCCCCTTCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATGCTGTGATGCTGATCTTCCTTGAAACCATAGCATGCTACT
CTTCACAGTGACGTTGTACTCTCCTCATTCTGCACTGCAAGGCCACTCTTCTTCATTGTGAGATGCACATAACAATGTTTAGGATATTGC
AGTGTAGGCTTTTTTAAAGACCAAAGGTAGCTGAATGGTTTTTTTTTAAATGAGTACAACTCTAGCATTTTGAAGTTCCAGTTGTAAATG
TATTTGTTTACCAGTAGGTTTGTGAAATTGGTTCTTTGTATGGGGGATGGTCCTTTTTCACACAGCTAGGTCTTTTCAGAAGTGGTGGAA
ATTGGCAGCTGGGGTACTTTCAGTTTGGACTGATATTCATCACACCTCAGATAAAATGCAGAGTAATATATAGTTGCACTTTATAAATGG
TGGTTAAATGGAAATGTTCAAGCCATTTTATAGTTGTGATGCACAATATAATTTAAGTGCTTCTGTCAAAGTATTCCTCCAGTACAATTT
GTATAGTTTGCTGCCCTTGATGAGCAAAAAGTATTTATCTTGGGCTTATCTGAATGATCAGGATGAGATTTAATGCCCATATCTTACCAG
TTCAGTTATCTCCAGAGCCATTTCACCCTTTAGAGTGAGTCACATGCAGGGAGTGTGAATGTCAGAGGTGGTTTATTATCCAGTCTGCCT
TACCCTTAATCTGTTCACAGATATTTATTTACTAATGCTTTTTTTTTCTTAAGAGTTATGGGATAGGAAAATGAAGTGTTTGCTCTTCAT

>In-frame_ENST00000316399_ENST00000278174_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(amino acids)=258AA_start in transcript=0_stop in transcript=776
LFFFCRRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESEN
NKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGYPTYKEKVKKRPGGRPEVIYNYVQ

--------------------------------------------------------------
>In-frame_ENST00000316399_ENST00000530907_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(transcript)=925nt_BP=466nt
CTGTTTTTTTTCTGCAGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGAT
TTAACCTCAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCT
GAGGAGCTACCAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAAT
AATAAGTTATGTTCCCTATATTCCTTCCGAAATACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACC
AGTGTTACTTTTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACT
CGGACTGAACAAGAGGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTATGTCCAA
AGACCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATCACCAAT
CTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCAACTCCACAAGTGGATGAGCTGGATATTCTCCCTATC
CATCCCCCTTCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATGCTGTGATGCTGATCTTCCTTGAAACCATAGCATGCTACT
CTTCACAGTGACGTTGTACTCTCCTCATTCTGCACTGCAAGGCCACTCTTCTTCATTGTGAGATGCACATAACAATGTTTAGGATATTGC

>In-frame_ENST00000316399_ENST00000530907_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(amino acids)=258AA_start in transcript=0_stop in transcript=776
LFFFCRRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESEN
NKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGYPTYKEKVKKRPGGRPEVIYNYVQ

--------------------------------------------------------------
>In-frame_ENST00000396356_ENST00000278174_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(transcript)=1664nt_BP=523nt
GTCACTTTCATGAATTCAAAGGCAATTTACCAGTGATTTCTGGGTGCTGGGGCTGATATTTTTTGTGCATATTTAAGAATGTCTTCCAAG
CAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGAT
CAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAA
CAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTATGTTCCCTATATTCCTTCCGAAAT
ACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACTTTTGGAACCCCAGAGCGCCGCAAA
GGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAACAAGAGGGTTATCCTACCTACAAA
GAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTATGTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAA
GAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATCACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGAC
CAGCTGGTAGTCATGCATCCAACTCCACAAGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCT
GATGCACAGAATCCAATGCTGTGATGCTGATCTTCCTTGAAACCATAGCATGCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGC
ACTGCAAGGCCACTCTTCTTCATTGTGAGATGCACATAACAATGTTTAGGATATTGCAGTGTAGGCTTTTTTAAAGACCAAAGGTAGCTG
AATGGTTTTTTTTTAAATGAGTACAACTCTAGCATTTTGAAGTTCCAGTTGTAAATGTATTTGTTTACCAGTAGGTTTGTGAAATTGGTT
CTTTGTATGGGGGATGGTCCTTTTTCACACAGCTAGGTCTTTTCAGAAGTGGTGGAAATTGGCAGCTGGGGTACTTTCAGTTTGGACTGA
TATTCATCACACCTCAGATAAAATGCAGAGTAATATATAGTTGCACTTTATAAATGGTGGTTAAATGGAAATGTTCAAGCCATTTTATAG
TTGTGATGCACAATATAATTTAAGTGCTTCTGTCAAAGTATTCCTCCAGTACAATTTGTATAGTTTGCTGCCCTTGATGAGCAAAAAGTA
TTTATCTTGGGCTTATCTGAATGATCAGGATGAGATTTAATGCCCATATCTTACCAGTTCAGTTATCTCCAGAGCCATTTCACCCTTTAG
AGTGAGTCACATGCAGGGAGTGTGAATGTCAGAGGTGGTTTATTATCCAGTCTGCCTTACCCTTAATCTGTTCACAGATATTTATTTACT
AATGCTTTTTTTTTCTTAAGAGTTATGGGATAGGAAAATGAAGTGTTTGCTCTTCATTTACTAAATGATTGTAAACTTGAGTTTTTCATC

>In-frame_ENST00000396356_ENST00000278174_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(amino acids)=264AA_start in transcript=39_stop in transcript=833
MGAGADIFCAYLRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQ
RMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGYPTYKEKVKKRPGGRPEV

--------------------------------------------------------------
>In-frame_ENST00000396356_ENST00000530907_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(transcript)=982nt_BP=523nt
GTCACTTTCATGAATTCAAAGGCAATTTACCAGTGATTTCTGGGTGCTGGGGCTGATATTTTTTGTGCATATTTAAGAATGTCTTCCAAG
CAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGAT
CAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAA
CAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTATGTTCCCTATATTCCTTCCGAAAT
ACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACTTTTGGAACCCCAGAGCGCCGCAAA
GGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAACAAGAGGGTTATCCTACCTACAAA
GAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTATGTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAA
GAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATCACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGAC
CAGCTGGTAGTCATGCATCCAACTCCACAAGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCT
GATGCACAGAATCCAATGCTGTGATGCTGATCTTCCTTGAAACCATAGCATGCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGC

>In-frame_ENST00000396356_ENST00000530907_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(amino acids)=264AA_start in transcript=39_stop in transcript=833
MGAGADIFCAYLRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQ
RMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGYPTYKEKVKKRPGGRPEV

--------------------------------------------------------------
>In-frame_ENST00000352083_ENST00000278174_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(transcript)=1664nt_BP=523nt
GTCACTTTCATGAATTCAAAGGCAATTTACCAGTGATTTCTGGGTGCTGGGGCTGATATTTTTTGTGCATATTTAAGAATGTCTTCCAAG
CAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGAT
CAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAA
CAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTATGTTCCCTATATTCCTTCCGAAAT
ACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACTTTTGGAACCCCAGAGCGCCGCAAA
GGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAACAAGAGGGTTATCCTACCTACAAA
GAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTATGTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAA
GAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATCACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGAC
CAGCTGGTAGTCATGCATCCAACTCCACAAGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCT
GATGCACAGAATCCAATGCTGTGATGCTGATCTTCCTTGAAACCATAGCATGCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGC
ACTGCAAGGCCACTCTTCTTCATTGTGAGATGCACATAACAATGTTTAGGATATTGCAGTGTAGGCTTTTTTAAAGACCAAAGGTAGCTG
AATGGTTTTTTTTTAAATGAGTACAACTCTAGCATTTTGAAGTTCCAGTTGTAAATGTATTTGTTTACCAGTAGGTTTGTGAAATTGGTT
CTTTGTATGGGGGATGGTCCTTTTTCACACAGCTAGGTCTTTTCAGAAGTGGTGGAAATTGGCAGCTGGGGTACTTTCAGTTTGGACTGA
TATTCATCACACCTCAGATAAAATGCAGAGTAATATATAGTTGCACTTTATAAATGGTGGTTAAATGGAAATGTTCAAGCCATTTTATAG
TTGTGATGCACAATATAATTTAAGTGCTTCTGTCAAAGTATTCCTCCAGTACAATTTGTATAGTTTGCTGCCCTTGATGAGCAAAAAGTA
TTTATCTTGGGCTTATCTGAATGATCAGGATGAGATTTAATGCCCATATCTTACCAGTTCAGTTATCTCCAGAGCCATTTCACCCTTTAG
AGTGAGTCACATGCAGGGAGTGTGAATGTCAGAGGTGGTTTATTATCCAGTCTGCCTTACCCTTAATCTGTTCACAGATATTTATTTACT
AATGCTTTTTTTTTCTTAAGAGTTATGGGATAGGAAAATGAAGTGTTTGCTCTTCATTTACTAAATGATTGTAAACTTGAGTTTTTCATC

>In-frame_ENST00000352083_ENST00000278174_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(amino acids)=264AA_start in transcript=39_stop in transcript=833
MGAGADIFCAYLRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQ
RMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGYPTYKEKVKKRPGGRPEV

--------------------------------------------------------------
>In-frame_ENST00000352083_ENST00000530907_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(transcript)=982nt_BP=523nt
GTCACTTTCATGAATTCAAAGGCAATTTACCAGTGATTTCTGGGTGCTGGGGCTGATATTTTTTGTGCATATTTAAGAATGTCTTCCAAG
CAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGAT
CAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAA
CAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTATGTTCCCTATATTCCTTCCGAAAT
ACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACTTTTGGAACCCCAGAGCGCCGCAAA
GGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAACAAGAGGGTTATCCTACCTACAAA
GAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTATGTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAA
GAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATCACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGAC
CAGCTGGTAGTCATGCATCCAACTCCACAAGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCT
GATGCACAGAATCCAATGCTGTGATGCTGATCTTCCTTGAAACCATAGCATGCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGC

>In-frame_ENST00000352083_ENST00000530907_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(amino acids)=264AA_start in transcript=39_stop in transcript=833
MGAGADIFCAYLRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQ
RMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGYPTYKEKVKKRPGGRPEV

--------------------------------------------------------------
>In-frame_ENST00000528252_ENST00000528120_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(transcript)=1076nt_BP=636nt
CCTTGGGGTTAGTTTTAGTCATATTTTTATCTCTATAAAACATCAGGCTGGGAGGTGGTGTGTGCCTGTAGTCTCAACTGCTAGGGAGCC
TGAGGCAGGAAGACTCCTTGAGCACAGGAGTTCAAGGCCAGCCTGTGCAACATAGTGAGACCCTATCACTCTGGAAAAAAAAAAAAAATC
TGCGGAGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAA
GGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTAC
CAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTAT
GTTCCCTATATTCCTTCCGAAATACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACTT
TTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAAC
AAGAGGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTATGTCCAAAGACCCTTTA
TTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATCACCAATCTTGCAGCAG
CTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCAACTCCACAAGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCTT
CTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATGCTGTGATGCTGATCTTCCTTGAAACCATAGCATGCTACTCTTCACAGTG

>In-frame_ENST00000528252_ENST00000528120_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(amino acids)=289AA_start in transcript=77_stop in transcript=946
MLGSLRQEDSLSTGVQGQPVQHSETLSLWKKKKNLRRRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPH
SEELPTLVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEM
TRTEQEGYPTYKEKVKKRPGGRPEVIYNYVQRPFIRMSWEKEEGKSRHVDFQCVKSKSITNLAAAAADIPQDQLVVMHPTPQVDELDILP

--------------------------------------------------------------
>In-frame_ENST00000527619_ENST00000278174_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(transcript)=1778nt_BP=637nt
GGGATAGGAAAGATGAAAGGTCATGGTGAGCTTCAAGGACATGAAAGGTTGTTGTCTCATGTAACAATAGTAGATTGTTTTTTTTCCTAA
TATTTCTAGCCAGCCCCTAAGTCAGGTGATGGAACAAATACCTACAGTTTAGTCAGGTGAAACAGGAGTGGGTGGAGGAAGGAAAGAAGA
AAAATGGGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCA
AGGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTA
CCAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTA
TGTTCCCTATATTCCTTCCGAAATACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACT
TTTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAA
CAAGAGGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTATGTCCAAAGACCCTTT
ATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATCACCAATCTTGCAGCA
GCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCAACTCCACAAGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCT
TCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATGCTGTGATGCTGATCTTCCTTGAAACCATAGCATGCTACTCTTCACAGT
GACGTTGTACTCTCCTCATTCTGCACTGCAAGGCCACTCTTCTTCATTGTGAGATGCACATAACAATGTTTAGGATATTGCAGTGTAGGC
TTTTTTAAAGACCAAAGGTAGCTGAATGGTTTTTTTTTAAATGAGTACAACTCTAGCATTTTGAAGTTCCAGTTGTAAATGTATTTGTTT
ACCAGTAGGTTTGTGAAATTGGTTCTTTGTATGGGGGATGGTCCTTTTTCACACAGCTAGGTCTTTTCAGAAGTGGTGGAAATTGGCAGC
TGGGGTACTTTCAGTTTGGACTGATATTCATCACACCTCAGATAAAATGCAGAGTAATATATAGTTGCACTTTATAAATGGTGGTTAAAT
GGAAATGTTCAAGCCATTTTATAGTTGTGATGCACAATATAATTTAAGTGCTTCTGTCAAAGTATTCCTCCAGTACAATTTGTATAGTTT
GCTGCCCTTGATGAGCAAAAAGTATTTATCTTGGGCTTATCTGAATGATCAGGATGAGATTTAATGCCCATATCTTACCAGTTCAGTTAT
CTCCAGAGCCATTTCACCCTTTAGAGTGAGTCACATGCAGGGAGTGTGAATGTCAGAGGTGGTTTATTATCCAGTCTGCCTTACCCTTAA
TCTGTTCACAGATATTTATTTACTAATGCTTTTTTTTTCTTAAGAGTTATGGGATAGGAAAATGAAGTGTTTGCTCTTCATTTACTAAAT

>In-frame_ENST00000527619_ENST00000278174_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(amino acids)=254AA_start in transcript=183_stop in transcript=947
MGRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESENNKLC
SLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGYPTYKEKVKKRPGGRPEVIYNYVQRPFI

--------------------------------------------------------------
>In-frame_ENST00000527619_ENST00000530907_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(transcript)=1096nt_BP=637nt
GGGATAGGAAAGATGAAAGGTCATGGTGAGCTTCAAGGACATGAAAGGTTGTTGTCTCATGTAACAATAGTAGATTGTTTTTTTTCCTAA
TATTTCTAGCCAGCCCCTAAGTCAGGTGATGGAACAAATACCTACAGTTTAGTCAGGTGAAACAGGAGTGGGTGGAGGAAGGAAAGAAGA
AAAATGGGAAGAATGTCTTCCAAGCAAGCCACCTCTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCA
AGGGAAAAGGAAGAGGGCAGTGATCAACATGTGGCCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTA
CCAACACTTGTCAGTACCATTCAACAAGATGCTGACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTA
TGTTCCCTATATTCCTTCCGAAATACCTCTACCTCACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACT
TTTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTGCCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAA
CAAGAGGGTTATCCTACCTACAAAGAAAAAGTAAAGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTATGTCCAAAGACCCTTT
ATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGAGTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATCACCAATCTTGCAGCA
GCTGCAGCAGACATTCCCCAGGACCAGCTGGTAGTCATGCATCCAACTCCACAAGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCT
TCTGGCAACAGTGACCTCGATCCTGATGCACAGAATCCAATGCTGTGATGCTGATCTTCCTTGAAACCATAGCATGCTACTCTTCACAGT
GACGTTGTACTCTCCTCATTCTGCACTGCAAGGCCACTCTTCTTCATTGTGAGATGCACATAACAATGTTTAGGATATTGCAGTGTAGGC

>In-frame_ENST00000527619_ENST00000530907_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(amino acids)=254AA_start in transcript=183_stop in transcript=947
MGRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESENNKLC
SLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGYPTYKEKVKKRPGGRPEVIYNYVQRPFI

--------------------------------------------------------------
>In-frame_ENST00000528429_ENST00000528120_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(transcript)=953nt_BP=513nt
GTTAGGAGAGACCATTGGGGATAGGAAAGATGAAAGGTCATGGTGAGCTTCAAGGACATGAAAGAAGAATGTCTTCCAAGCAAGCCACCT
CTCCATTTGCCTGTGCAGCTGATGGAGAGGATGCAATGACCCAGGATTTAACCTCAAGGGAAAAGGAAGAGGGCAGTGATCAACATGTGG
CCTCCCATCTGCCTCTGCACCCCATAATGCACAACAAACCTCACTCTGAGGAGCTACCAACACTTGTCAGTACCATTCAACAAGATGCTG
ACTGGGACAGCGTTCTGTCATCTCAGCAAAGAATGGAATCAGAGAATAATAAGTTATGTTCCCTATATTCCTTCCGAAATACCTCTACCT
CACCACATAAGCCTGACGAAGGGAGTCGGGACCGTGAGATAATGACCAGTGTTACTTTTGGAACCCCAGAGCGCCGCAAAGGGAGTCTTG
CCGATGTGGTGGACACACTGAAACAGAAGAAGCTTGAGGAAATGACTCGGACTGAACAAGAGGGTTATCCTACCTACAAAGAAAAAGTAA
AGAAAAGGCCTGGAGGCCGCCCAGAAGTGATCTACAACTATGTCCAAAGACCCTTTATTCGAATGTCCTGGGAGAAGGAAGAAGGAAAGA
GTCGGCATGTAGACTTTCAGTGTGTAAAGAGTAAATCTATCACCAATCTTGCAGCAGCTGCAGCAGACATTCCCCAGGACCAGCTGGTAG
TCATGCATCCAACTCCACAAGTGGATGAGCTGGATATTCTCCCTATCCATCCCCCTTCTGGCAACAGTGACCTCGATCCTGATGCACAGA
ATCCAATGCTGTGATGCTGATCTTCCTTGAAACCATAGCATGCTACTCTTCACAGTGACGTTGTACTCTCCTCATTCTGCACTGCAAGGC

>In-frame_ENST00000528429_ENST00000528120_TCGA-KL-8339-01A_SOX6_chr11_16339992_-_BTBD10_chr11_13410688_length(amino acids)=269AA_start in transcript=14_stop in transcript=823
MGIGKMKGHGELQGHERRMSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSV
LSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEGYPTYKEKVKKRPG

--------------------------------------------------------------

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Fusion Gene PPI Analysis for SOX6-BTBD10


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with
TgeneBTBD10chr11:16339992chr11:13410688ENST0000027817479146_475372.3333333333333476.0AKT family members
TgeneBTBD10chr11:16339992chr11:13427403ENST0000027817459146_475269.3333333333333476.0AKT family members


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for SOX6-BTBD10


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for SOX6-BTBD10


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneSOX6C3495676Anorectal Malformations1GENOMICS_ENGLAND