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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:ST5-DENND5A (FusionGDB2 ID:86367) |
Fusion Gene Summary for ST5-DENND5A |
Fusion gene summary |
Fusion gene information | Fusion gene name: ST5-DENND5A | Fusion gene ID: 86367 | Hgene | Tgene | Gene symbol | ST5 | DENND5A | Gene ID | 6764 | 23258 |
Gene name | DENN domain containing 2B | DENN domain containing 5A | |
Synonyms | HTS1|ST5|p126 | EIEE49|RAB6IP1 | |
Cytomap | 11p15.4 | 11p15.4 | |
Type of gene | protein-coding | protein-coding | |
Description | suppression of tumorigenicity 5 proteinDENN/MADD domain containing 2BheLa tumor suppression 1 | DENN domain-containing protein 5ADENN/MADD domain containing 5ARAB6 interacting protein 1rab6-interacting protein 1 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | Q6IQ26 | |
Ensembl transtripts involved in fusion gene | ENST00000526757, ENST00000534127, ENST00000313726, ENST00000357665, ENST00000530438, ENST00000530991, ENST00000526099, ENST00000534278, ENST00000531237, | ENST00000328194, ENST00000530044, ENST00000527700, ENST00000526523, | |
Fusion gene scores | * DoF score | 10 X 11 X 7=770 | 15 X 15 X 6=1350 |
# samples | 12 | 16 | |
** MAII score | log2(12/770*10)=-2.68182403997375 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(16/1350*10)=-3.07681559705083 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ST5 [Title/Abstract] AND DENND5A [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | DENND5A(9163487)-ST5(8772272), # samples:1 ST5(8853103)-DENND5A(9171756), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. | ST5-DENND5A seems lost the major protein functional domain in Hgene partner, which is a tumor suppressor due to the frame-shifted ORF. ST5-DENND5A seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. ST5-DENND5A seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across ST5 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across DENND5A (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | SKCM | TCGA-W3-AA1V-06B | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
ChimerDB4 | SKCM | TCGA-W3-AA1V-06B | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
ChimerDB4 | SKCM | TCGA-W3-AA1V-06B | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
ChimerDB4 | SKCM | TCGA-W3-AA1V-06B | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
ChimerDB4 | BRCA | TCGA-B6-A0X1-01A | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
ChimerDB4 | SKCM | TCGA-W3-AA1V-06B | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
Top |
Fusion Gene ORF analysis for ST5-DENND5A |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000526757 | ENST00000328194 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526757 | ENST00000530044 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526757 | ENST00000527700 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000526757 | ENST00000526523 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000534127 | ENST00000328194 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000534127 | ENST00000530044 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000534127 | ENST00000527700 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000534127 | ENST00000526523 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000313726 | ENST00000328194 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000313726 | ENST00000530044 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000313726 | ENST00000527700 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000313726 | ENST00000526523 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000357665 | ENST00000328194 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000357665 | ENST00000530044 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000357665 | ENST00000527700 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000357665 | ENST00000526523 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530438 | ENST00000328194 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530438 | ENST00000530044 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530438 | ENST00000527700 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000530438 | ENST00000526523 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530991 | ENST00000328194 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530991 | ENST00000530044 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530991 | ENST00000527700 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000530991 | ENST00000526523 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526099 | ENST00000328194 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526099 | ENST00000530044 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526099 | ENST00000527700 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000526099 | ENST00000526523 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000534278 | ENST00000328194 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000534278 | ENST00000530044 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000534278 | ENST00000527700 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000534278 | ENST00000526523 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000531237 | ENST00000328194 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000531237 | ENST00000530044 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000531237 | ENST00000527700 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000531237 | ENST00000526523 | ST5 | chr11 | 8853103 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526757 | ENST00000328194 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526757 | ENST00000530044 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526757 | ENST00000527700 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000526757 | ENST00000526523 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
5UTR-3CDS | ENST00000534127 | ENST00000328194 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
5UTR-3CDS | ENST00000534127 | ENST00000530044 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
5UTR-3CDS | ENST00000534127 | ENST00000527700 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
5UTR-intron | ENST00000534127 | ENST00000526523 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000313726 | ENST00000328194 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000313726 | ENST00000530044 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000313726 | ENST00000527700 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000313726 | ENST00000526523 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
5UTR-3CDS | ENST00000357665 | ENST00000328194 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
5UTR-3CDS | ENST00000357665 | ENST00000530044 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
5UTR-3CDS | ENST00000357665 | ENST00000527700 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
5UTR-intron | ENST00000357665 | ENST00000526523 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530438 | ENST00000328194 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530438 | ENST00000530044 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530438 | ENST00000527700 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000530438 | ENST00000526523 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530991 | ENST00000328194 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530991 | ENST00000530044 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530991 | ENST00000527700 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000530991 | ENST00000526523 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526099 | ENST00000328194 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526099 | ENST00000530044 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526099 | ENST00000527700 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000526099 | ENST00000526523 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000534278 | ENST00000328194 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000534278 | ENST00000530044 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000534278 | ENST00000527700 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000534278 | ENST00000526523 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000531237 | ENST00000328194 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000531237 | ENST00000530044 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000531237 | ENST00000527700 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000531237 | ENST00000526523 | ST5 | chr11 | 8860857 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526757 | ENST00000328194 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526757 | ENST00000530044 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526757 | ENST00000527700 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000526757 | ENST00000526523 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000534127 | ENST00000328194 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000534127 | ENST00000530044 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000534127 | ENST00000527700 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000534127 | ENST00000526523 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000313726 | ENST00000328194 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000313726 | ENST00000530044 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000313726 | ENST00000527700 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000313726 | ENST00000526523 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000357665 | ENST00000328194 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000357665 | ENST00000530044 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000357665 | ENST00000527700 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000357665 | ENST00000526523 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530438 | ENST00000328194 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530438 | ENST00000530044 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530438 | ENST00000527700 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000530438 | ENST00000526523 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530991 | ENST00000328194 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530991 | ENST00000530044 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000530991 | ENST00000527700 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000530991 | ENST00000526523 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526099 | ENST00000328194 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526099 | ENST00000530044 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000526099 | ENST00000527700 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000526099 | ENST00000526523 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000534278 | ENST00000328194 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000534278 | ENST00000530044 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000534278 | ENST00000527700 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000534278 | ENST00000526523 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000531237 | ENST00000328194 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000531237 | ENST00000530044 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-3CDS | ENST00000531237 | ENST00000527700 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
intron-intron | ENST00000531237 | ENST00000526523 | ST5 | chr11 | 8892881 | - | DENND5A | chr11 | 9171756 | - |
Frame-shift | ENST00000526757 | ENST00000328194 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
Frame-shift | ENST00000526757 | ENST00000530044 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
Frame-shift | ENST00000526757 | ENST00000527700 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
5CDS-intron | ENST00000526757 | ENST00000526523 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
In-frame | ENST00000534127 | ENST00000328194 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
In-frame | ENST00000534127 | ENST00000530044 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
In-frame | ENST00000534127 | ENST00000527700 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
5CDS-intron | ENST00000534127 | ENST00000526523 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
In-frame | ENST00000313726 | ENST00000328194 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
In-frame | ENST00000313726 | ENST00000530044 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
In-frame | ENST00000313726 | ENST00000527700 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
5CDS-intron | ENST00000313726 | ENST00000526523 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
In-frame | ENST00000357665 | ENST00000328194 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
In-frame | ENST00000357665 | ENST00000530044 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
In-frame | ENST00000357665 | ENST00000527700 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
5CDS-intron | ENST00000357665 | ENST00000526523 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
In-frame | ENST00000530438 | ENST00000328194 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
In-frame | ENST00000530438 | ENST00000530044 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
In-frame | ENST00000530438 | ENST00000527700 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
5CDS-intron | ENST00000530438 | ENST00000526523 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
intron-3CDS | ENST00000530991 | ENST00000328194 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
intron-3CDS | ENST00000530991 | ENST00000530044 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
intron-3CDS | ENST00000530991 | ENST00000527700 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
intron-intron | ENST00000530991 | ENST00000526523 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
intron-3CDS | ENST00000526099 | ENST00000328194 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
intron-3CDS | ENST00000526099 | ENST00000530044 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
intron-3CDS | ENST00000526099 | ENST00000527700 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
intron-intron | ENST00000526099 | ENST00000526523 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
intron-3CDS | ENST00000534278 | ENST00000328194 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
intron-3CDS | ENST00000534278 | ENST00000530044 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
intron-3CDS | ENST00000534278 | ENST00000527700 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
intron-intron | ENST00000534278 | ENST00000526523 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
intron-3CDS | ENST00000531237 | ENST00000328194 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
intron-3CDS | ENST00000531237 | ENST00000530044 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
intron-3CDS | ENST00000531237 | ENST00000527700 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
intron-intron | ENST00000531237 | ENST00000526523 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000534127 | ST5 | chr11 | 8772168 | - | ENST00000328194 | DENND5A | chr11 | 9163655 | - | 1665 | 466 | 1267 | 1548 | 93 |
ENST00000534127 | ST5 | chr11 | 8772168 | - | ENST00000530044 | DENND5A | chr11 | 9163655 | - | 997 | 466 | 886 | 611 | 91 |
ENST00000534127 | ST5 | chr11 | 8772168 | - | ENST00000527700 | DENND5A | chr11 | 9163655 | - | 986 | 466 | 920 | 645 | 91 |
ENST00000313726 | ST5 | chr11 | 8772168 | - | ENST00000328194 | DENND5A | chr11 | 9163655 | - | 1628 | 429 | 1230 | 1511 | 93 |
ENST00000313726 | ST5 | chr11 | 8772168 | - | ENST00000530044 | DENND5A | chr11 | 9163655 | - | 960 | 429 | 849 | 574 | 91 |
ENST00000313726 | ST5 | chr11 | 8772168 | - | ENST00000527700 | DENND5A | chr11 | 9163655 | - | 949 | 429 | 883 | 608 | 91 |
ENST00000357665 | ST5 | chr11 | 8772168 | - | ENST00000328194 | DENND5A | chr11 | 9163655 | - | 1439 | 240 | 1041 | 1322 | 93 |
ENST00000357665 | ST5 | chr11 | 8772168 | - | ENST00000530044 | DENND5A | chr11 | 9163655 | - | 771 | 240 | 660 | 385 | 91 |
ENST00000357665 | ST5 | chr11 | 8772168 | - | ENST00000527700 | DENND5A | chr11 | 9163655 | - | 760 | 240 | 694 | 419 | 91 |
ENST00000530438 | ST5 | chr11 | 8772168 | - | ENST00000328194 | DENND5A | chr11 | 9163655 | - | 1804 | 605 | 374 | 0 | 125 |
ENST00000530438 | ST5 | chr11 | 8772168 | - | ENST00000530044 | DENND5A | chr11 | 9163655 | - | 1136 | 605 | 1025 | 750 | 91 |
ENST00000530438 | ST5 | chr11 | 8772168 | - | ENST00000527700 | DENND5A | chr11 | 9163655 | - | 1125 | 605 | 374 | 0 | 125 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000534127 | ENST00000328194 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - | 0.55549926 | 0.44450068 |
ENST00000534127 | ENST00000530044 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - | 0.29909363 | 0.70090634 |
ENST00000534127 | ENST00000527700 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - | 0.12167577 | 0.8783243 |
ENST00000313726 | ENST00000328194 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - | 0.68271935 | 0.3172807 |
ENST00000313726 | ENST00000530044 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - | 0.4506284 | 0.5493716 |
ENST00000313726 | ENST00000527700 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - | 0.15894318 | 0.8410568 |
ENST00000357665 | ENST00000328194 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - | 0.69158214 | 0.3084178 |
ENST00000357665 | ENST00000530044 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - | 0.216619 | 0.783381 |
ENST00000357665 | ENST00000527700 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - | 0.09405961 | 0.9059404 |
ENST00000530438 | ENST00000328194 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - | 0.9322919 | 0.06770802 |
ENST00000530438 | ENST00000530044 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - | 0.515475 | 0.48452502 |
ENST00000530438 | ENST00000527700 | ST5 | chr11 | 8772168 | - | DENND5A | chr11 | 9163655 | - | 0.27380586 | 0.7261941 |
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Fusion Genomic Features for ST5-DENND5A |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for ST5-DENND5A |
Go to FGviewer for the breakpoints of chr11:8772168-chr11:9163655 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | DENND5A |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Guanine nucleotide exchange factor (GEF) which may activate RAB6A and RAB39A and/or RAB39B. Promotes the exchange of GDP to GTP, converting inactive GDP-bound Rab proteins into their active GTP-bound form. Involved in the negative regulation of neurite outgrowth (By similarity). {ECO:0000250|UniProtKB:G3V7Q0, ECO:0000269|PubMed:20937701}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000313726 | - | 2 | 20 | 33_93 | 26.666666666666668 | 1138.0 | Compositional bias | Note=Pro-rich |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000313726 | - | 2 | 20 | 350_434 | 26.666666666666668 | 1138.0 | Compositional bias | Note=Pro-rich |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000357665 | - | 3 | 21 | 33_93 | 26.666666666666668 | 1138.0 | Compositional bias | Note=Pro-rich |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000357665 | - | 3 | 21 | 350_434 | 26.666666666666668 | 1138.0 | Compositional bias | Note=Pro-rich |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000526757 | - | 2 | 19 | 33_93 | 26.666666666666668 | 718.0 | Compositional bias | Note=Pro-rich |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000526757 | - | 2 | 19 | 350_434 | 26.666666666666668 | 718.0 | Compositional bias | Note=Pro-rich |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000530438 | - | 2 | 19 | 33_93 | 26.666666666666668 | 718.0 | Compositional bias | Note=Pro-rich |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000530438 | - | 2 | 19 | 350_434 | 26.666666666666668 | 718.0 | Compositional bias | Note=Pro-rich |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000530991 | - | 1 | 17 | 33_93 | 0 | 610.0 | Compositional bias | Note=Pro-rich |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000530991 | - | 1 | 17 | 350_434 | 0 | 610.0 | Compositional bias | Note=Pro-rich |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000534127 | - | 5 | 23 | 33_93 | 26.666666666666668 | 1138.0 | Compositional bias | Note=Pro-rich |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000534127 | - | 5 | 23 | 350_434 | 26.666666666666668 | 1138.0 | Compositional bias | Note=Pro-rich |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000313726 | - | 2 | 20 | 1003_1096 | 26.666666666666668 | 1138.0 | Domain | dDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000313726 | - | 2 | 20 | 698_846 | 26.666666666666668 | 1138.0 | Domain | uDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000313726 | - | 2 | 20 | 868_1001 | 26.666666666666668 | 1138.0 | Domain | cDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000357665 | - | 3 | 21 | 1003_1096 | 26.666666666666668 | 1138.0 | Domain | dDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000357665 | - | 3 | 21 | 698_846 | 26.666666666666668 | 1138.0 | Domain | uDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000357665 | - | 3 | 21 | 868_1001 | 26.666666666666668 | 1138.0 | Domain | cDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000526757 | - | 2 | 19 | 1003_1096 | 26.666666666666668 | 718.0 | Domain | dDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000526757 | - | 2 | 19 | 698_846 | 26.666666666666668 | 718.0 | Domain | uDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000526757 | - | 2 | 19 | 868_1001 | 26.666666666666668 | 718.0 | Domain | cDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000530438 | - | 2 | 19 | 1003_1096 | 26.666666666666668 | 718.0 | Domain | dDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000530438 | - | 2 | 19 | 698_846 | 26.666666666666668 | 718.0 | Domain | uDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000530438 | - | 2 | 19 | 868_1001 | 26.666666666666668 | 718.0 | Domain | cDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000530991 | - | 1 | 17 | 1003_1096 | 0 | 610.0 | Domain | dDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000530991 | - | 1 | 17 | 698_846 | 0 | 610.0 | Domain | uDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000530991 | - | 1 | 17 | 868_1001 | 0 | 610.0 | Domain | cDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000534127 | - | 5 | 23 | 1003_1096 | 26.666666666666668 | 1138.0 | Domain | dDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000534127 | - | 5 | 23 | 698_846 | 26.666666666666668 | 1138.0 | Domain | uDENN |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000534127 | - | 5 | 23 | 868_1001 | 26.666666666666668 | 1138.0 | Domain | cDENN |
Tgene | DENND5A | chr11:8772168 | chr11:9163655 | ENST00000328194 | 20 | 23 | 3_9 | 1170.3333333333333 | 1288.0 | Compositional bias | Note=Poly-Gly | |
Tgene | DENND5A | chr11:8772168 | chr11:9163655 | ENST00000328194 | 20 | 23 | 593_598 | 1170.3333333333333 | 1288.0 | Compositional bias | Note=Poly-Asp | |
Tgene | DENND5A | chr11:8772168 | chr11:9163655 | ENST00000530044 | 20 | 23 | 3_9 | 1170.3333333333333 | 1242.0 | Compositional bias | Note=Poly-Gly | |
Tgene | DENND5A | chr11:8772168 | chr11:9163655 | ENST00000530044 | 20 | 23 | 593_598 | 1170.3333333333333 | 1242.0 | Compositional bias | Note=Poly-Asp | |
Tgene | DENND5A | chr11:8772168 | chr11:9163655 | ENST00000328194 | 20 | 23 | 1134_1282 | 1170.3333333333333 | 1288.0 | Domain | RUN 2 | |
Tgene | DENND5A | chr11:8772168 | chr11:9163655 | ENST00000328194 | 20 | 23 | 278_414 | 1170.3333333333333 | 1288.0 | Domain | cDENN | |
Tgene | DENND5A | chr11:8772168 | chr11:9163655 | ENST00000328194 | 20 | 23 | 416_598 | 1170.3333333333333 | 1288.0 | Domain | dDENN | |
Tgene | DENND5A | chr11:8772168 | chr11:9163655 | ENST00000328194 | 20 | 23 | 57_259 | 1170.3333333333333 | 1288.0 | Domain | uDENN | |
Tgene | DENND5A | chr11:8772168 | chr11:9163655 | ENST00000328194 | 20 | 23 | 787_950 | 1170.3333333333333 | 1288.0 | Domain | RUN 1 | |
Tgene | DENND5A | chr11:8772168 | chr11:9163655 | ENST00000328194 | 20 | 23 | 954_1062 | 1170.3333333333333 | 1288.0 | Domain | PLAT | |
Tgene | DENND5A | chr11:8772168 | chr11:9163655 | ENST00000530044 | 20 | 23 | 1134_1282 | 1170.3333333333333 | 1242.0 | Domain | RUN 2 | |
Tgene | DENND5A | chr11:8772168 | chr11:9163655 | ENST00000530044 | 20 | 23 | 278_414 | 1170.3333333333333 | 1242.0 | Domain | cDENN | |
Tgene | DENND5A | chr11:8772168 | chr11:9163655 | ENST00000530044 | 20 | 23 | 416_598 | 1170.3333333333333 | 1242.0 | Domain | dDENN | |
Tgene | DENND5A | chr11:8772168 | chr11:9163655 | ENST00000530044 | 20 | 23 | 57_259 | 1170.3333333333333 | 1242.0 | Domain | uDENN | |
Tgene | DENND5A | chr11:8772168 | chr11:9163655 | ENST00000530044 | 20 | 23 | 787_950 | 1170.3333333333333 | 1242.0 | Domain | RUN 1 | |
Tgene | DENND5A | chr11:8772168 | chr11:9163655 | ENST00000530044 | 20 | 23 | 954_1062 | 1170.3333333333333 | 1242.0 | Domain | PLAT |
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Fusion Gene Sequence for ST5-DENND5A |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000534127_ENST00000328194_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(transcript)=1665nt_BP=466nt GGGGGTCGGGGGTCGGGGGCTGGGGGCTGAGGACTGAGTCGAGCCAGCAGCCCAGGGCATCTGTCCACGCTGTCAGAGGAGCCTCTGGGC GTGGGGCTGGCCCTTAGAGGGCTACTGCGCTGCTTAACTTGCCTTTCACAGAAAACCACTGGAGGAGATACTCACAAAAATGAAGGGGAA GAACAGGAAACAGGAAGACATGAGATGAAGGAAACAGGAGATTCAACATGGATTTCACACCCTTTGGAGAGTTTCTTTCTTGGATAATTC AGGAAGATGAGAGACTGCTTAGGCGCCACCACTAGTACCATGAGTCCCTGCACTGGTTAAAGCCATCGCCACAACCTGGACAGGCAGCAA GGGCTCTGGGTTTGCAGAGAGCCGAAATGACCATGACTGCCAACAAGAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTC GGGGGACTCTGAGCAGAAAAAGCACAAACCTATTATGAGACATTAGAGAAGAATGAAGTAGTCCCTGAGGAAAACTGGCATACAAGAGCC CGGAACTTCTGCCGATTTGTCACTGCAATCAACAATACTCCCCGGAACATCGGCAAGGATGGCAAGTTTCAGATGCTGGTGTGCTTGGGA GCCAGAGATCACCTCCTACACCACTGGATTGCCCTGCTGGCTGACTGCCCCATCACTGCACACATGTATGAGGATGTGGCACTGATCAAA GACCATACACTTGTCAATTCCTTGATTCGTGTGCTGCAGACATTGCAGGAGTTCAACATCACGCTGGAGACGTCCCTTGTCAAGGGCATC GACATCTGACCTCCCAGCACCAGCCAGCAGCAGGACTGAGAAAGACTCACCCTGCAGCTCTGACCTTTTTTCCCAAAGGGACTTAAGCGA TTGTGCAGGAGTAGGAGACAAAATGTACACTCACTGTAAAAAGAAAACTAGAGGATTTTTGGAATAAATAATCTATTTTAGAGTTTATTT GCTGATTTGCTTTTTACACACTTTCATGTGAAAGAGTGATAGGGAGAGGGAGCGAGGCTGGTGCCGCTTATTTTGAAGCTGGTGCCCTCC CTCGCCGTGGCCACATGCTGGAAGCCTGAGGCCTCCCTGGACTGAGCCTGTGGCACTGCGTGCGGGACAGTTATGTTTCCTTGCCCCGTC GCATTAATGAGGCCCTTCCACATCATTTTTAAACTAATGTTTTTCTATATTAACATTATTATGGATATTTGGCTTTCATAGGCCACACAC AGGTGTGCTGCGCGGGAAGCCCCATGCTCCAATCAAAGGGATTTTTAGTAGTGCCTCTAAGCAAGCACCGATGAGTCAGTCCCACGTATT TTCTTTTTTGTCAGTATTGTTTGGGAAGGAGACATGCCGGGATGTGTCATCGTGCCAAATACCACATTTCCTGTTGGCACAGTTTCACAG AAGTAAACATAAGCATGTTTTAACAGGTTTTTCTTTTCTTTTTTCTTTTTTAAAATGTTTTATTTATTTAACCCGCCATTGTGTGTTTTT AAGTATTTTCTTTTTTTAAGGAAAGGAAAAGCTTGTCACAATCTAACTGGCTATGTTATTATTATTAAATTTATGTTTTGCAACTTAGAA >In-frame_ENST00000534127_ENST00000328194_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(amino acids)=93AA_start in transcript=1267_stop in transcript=1548 MRGKPHAPIKGIFSSASKQAPMSQSHVFSFLSVLFGKETCRDVSSCQIPHFLLAQFHRSKHKHVLTGFSFLFSFLKCFIYLTRHCVFLSI -------------------------------------------------------------- >In-frame_ENST00000534127_ENST00000530044_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(transcript)=997nt_BP=466nt GGGGGTCGGGGGTCGGGGGCTGGGGGCTGAGGACTGAGTCGAGCCAGCAGCCCAGGGCATCTGTCCACGCTGTCAGAGGAGCCTCTGGGC GTGGGGCTGGCCCTTAGAGGGCTACTGCGCTGCTTAACTTGCCTTTCACAGAAAACCACTGGAGGAGATACTCACAAAAATGAAGGGGAA GAACAGGAAACAGGAAGACATGAGATGAAGGAAACAGGAGATTCAACATGGATTTCACACCCTTTGGAGAGTTTCTTTCTTGGATAATTC AGGAAGATGAGAGACTGCTTAGGCGCCACCACTAGTACCATGAGTCCCTGCACTGGTTAAAGCCATCGCCACAACCTGGACAGGCAGCAA GGGCTCTGGGTTTGCAGAGAGCCGAAATGACCATGACTGCCAACAAGAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTC GGGGGACTCTGAGCAGAAAAAGCACAAACCTATTATGAGACATTAGAGAAGAATGAAGTAGTCCCTGAGGAAAACTGGCATACAAGAGCC CGGAACTTCTGCCGATTTGTCACTGCAATCAACAATACTCCCCGGAACATCGGCAAGGATGAGATCACCTCCTACACCACTGGATTGCCC TGCTGGCTGACTGCCCCATCACTGCACACATGTATGAGGATGTGGCACTGATCAAAGACCATACACTTGTCAATTCCTTGATTCGTGTGC TGCAGACATTGCAGGAGTTCAACATCACGCTGGAGACGTCCCTTGTCAAGGGCATCGACATCTGACCTCCCAGCACCAGCCAGCAGCAGG ACTGAGAAAGACTCACCCTGCAGCTCTGACCTTTTTTCCCAAAGGGACTTAAGCGATTGTGCAGGAGTAGGAGACAAAATGTACACTCAC TGTAAAAAGAAAACTAGAGGATTTTTGGAATAAATAATCTATTTTAGAGTTTATTTGCTGATTTGCTTTTTACACACTTTCATGTGAAAG >In-frame_ENST00000534127_ENST00000530044_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(amino acids)=91AA_start in transcript=886_stop in transcript=611 MSPTPAQSLKSLWEKRSELQGESFSVLLLAGAGRSDVDALDKGRLQRDVELLQCLQHTNQGIDKCMVFDQCHILIHVCSDGAVSQQGNPV -------------------------------------------------------------- >In-frame_ENST00000534127_ENST00000527700_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(transcript)=986nt_BP=466nt GGGGGTCGGGGGTCGGGGGCTGGGGGCTGAGGACTGAGTCGAGCCAGCAGCCCAGGGCATCTGTCCACGCTGTCAGAGGAGCCTCTGGGC GTGGGGCTGGCCCTTAGAGGGCTACTGCGCTGCTTAACTTGCCTTTCACAGAAAACCACTGGAGGAGATACTCACAAAAATGAAGGGGAA GAACAGGAAACAGGAAGACATGAGATGAAGGAAACAGGAGATTCAACATGGATTTCACACCCTTTGGAGAGTTTCTTTCTTGGATAATTC AGGAAGATGAGAGACTGCTTAGGCGCCACCACTAGTACCATGAGTCCCTGCACTGGTTAAAGCCATCGCCACAACCTGGACAGGCAGCAA GGGCTCTGGGTTTGCAGAGAGCCGAAATGACCATGACTGCCAACAAGAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTC GGGGGACTCTGAGCAGAAAAAGCACAAACCTATTATGAGACATTAGAGAAGAATGAAGTAGTCCCTGAGGAAAACTGGCATACAAGAGCC CGGAACTTCTGCCGATTTGTCACTGCAATCAACAATACTCCCCGGAACATCGGCAAGGATGGCAAGTTTCAGATGCTGGTGTGCTTGGGA GCCAGAGATCACCTCCTACACCACTGGATTGCCCTGCTGGCTGACTGCCCCATCACTGCACACATGTATGAGGATGTGGCACTGATCAAA GACCATACACTTGTCAATTCCTTGATTCGTGTGCTGCAGACATTGCAGGAGTTCAACATCACGCTGGAGACGTCCCTTGTCAAGGGCATC GACATCTGACCTCCCAGCACCAGCCAGCAGCAGGACTGAGAAAGACTCACCCTGCAGCTCTGACCTTTTTTCCCAAAGGGACTTAAGCGA >In-frame_ENST00000534127_ENST00000527700_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(amino acids)=91AA_start in transcript=920_stop in transcript=645 MSPTPAQSLKSLWEKRSELQGESFSVLLLAGAGRSDVDALDKGRLQRDVELLQCLQHTNQGIDKCMVFDQCHILIHVCSDGAVSQQGNPV -------------------------------------------------------------- >In-frame_ENST00000313726_ENST00000328194_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(transcript)=1628nt_BP=429nt GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGTGAGAAAGAAAGAAAAAGAGAGCGCCCTTGTGCACGCGCTAGGCCAAGAGCGC GCCGCTGTGCGCGCGCCCGCCTAGCGAGGACAGGGTCTCCATGACAACCGGCCTGGCCGGCTAGCAGTGCTCTGCTCACTTGGCTGCGAG GAGCGCCACGAAAGGTCAGAGGAAGGAGCTGTGGGAAGCTCGCAGCAGGTATCGGAGCTTAAGCCAGTGGATTTGGGGGCCCTGGGCTCC CTAGCCGGCTGCGGTGTGAGAATGGAGTGGGCAGGAAAGCAGCGGGACTTTCAGGGCTCTGGGTTTGCAGAGAGCCGAAATGACCATGAC TGCCAACAAGAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTCGGGGGACTCTGAGCAGAAAAAGCACAAACCTATTATG AGACATTAGAGAAGAATGAAGTAGTCCCTGAGGAAAACTGGCATACAAGAGCCCGGAACTTCTGCCGATTTGTCACTGCAATCAACAATA CTCCCCGGAACATCGGCAAGGATGGCAAGTTTCAGATGCTGGTGTGCTTGGGAGCCAGAGATCACCTCCTACACCACTGGATTGCCCTGC TGGCTGACTGCCCCATCACTGCACACATGTATGAGGATGTGGCACTGATCAAAGACCATACACTTGTCAATTCCTTGATTCGTGTGCTGC AGACATTGCAGGAGTTCAACATCACGCTGGAGACGTCCCTTGTCAAGGGCATCGACATCTGACCTCCCAGCACCAGCCAGCAGCAGGACT GAGAAAGACTCACCCTGCAGCTCTGACCTTTTTTCCCAAAGGGACTTAAGCGATTGTGCAGGAGTAGGAGACAAAATGTACACTCACTGT AAAAAGAAAACTAGAGGATTTTTGGAATAAATAATCTATTTTAGAGTTTATTTGCTGATTTGCTTTTTACACACTTTCATGTGAAAGAGT GATAGGGAGAGGGAGCGAGGCTGGTGCCGCTTATTTTGAAGCTGGTGCCCTCCCTCGCCGTGGCCACATGCTGGAAGCCTGAGGCCTCCC TGGACTGAGCCTGTGGCACTGCGTGCGGGACAGTTATGTTTCCTTGCCCCGTCGCATTAATGAGGCCCTTCCACATCATTTTTAAACTAA TGTTTTTCTATATTAACATTATTATGGATATTTGGCTTTCATAGGCCACACACAGGTGTGCTGCGCGGGAAGCCCCATGCTCCAATCAAA GGGATTTTTAGTAGTGCCTCTAAGCAAGCACCGATGAGTCAGTCCCACGTATTTTCTTTTTTGTCAGTATTGTTTGGGAAGGAGACATGC CGGGATGTGTCATCGTGCCAAATACCACATTTCCTGTTGGCACAGTTTCACAGAAGTAAACATAAGCATGTTTTAACAGGTTTTTCTTTT CTTTTTTCTTTTTTAAAATGTTTTATTTATTTAACCCGCCATTGTGTGTTTTTAAGTATTTTCTTTTTTTAAGGAAAGGAAAAGCTTGTC ACAATCTAACTGGCTATGTTATTATTATTAAATTTATGTTTTGCAACTTAGAAACCAGCTACAGTATGGCCCACTTAATAAAACACCTGA >In-frame_ENST00000313726_ENST00000328194_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(amino acids)=93AA_start in transcript=1230_stop in transcript=1511 MRGKPHAPIKGIFSSASKQAPMSQSHVFSFLSVLFGKETCRDVSSCQIPHFLLAQFHRSKHKHVLTGFSFLFSFLKCFIYLTRHCVFLSI -------------------------------------------------------------- >In-frame_ENST00000313726_ENST00000530044_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(transcript)=960nt_BP=429nt GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGTGAGAAAGAAAGAAAAAGAGAGCGCCCTTGTGCACGCGCTAGGCCAAGAGCGC GCCGCTGTGCGCGCGCCCGCCTAGCGAGGACAGGGTCTCCATGACAACCGGCCTGGCCGGCTAGCAGTGCTCTGCTCACTTGGCTGCGAG GAGCGCCACGAAAGGTCAGAGGAAGGAGCTGTGGGAAGCTCGCAGCAGGTATCGGAGCTTAAGCCAGTGGATTTGGGGGCCCTGGGCTCC CTAGCCGGCTGCGGTGTGAGAATGGAGTGGGCAGGAAAGCAGCGGGACTTTCAGGGCTCTGGGTTTGCAGAGAGCCGAAATGACCATGAC TGCCAACAAGAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTCGGGGGACTCTGAGCAGAAAAAGCACAAACCTATTATG AGACATTAGAGAAGAATGAAGTAGTCCCTGAGGAAAACTGGCATACAAGAGCCCGGAACTTCTGCCGATTTGTCACTGCAATCAACAATA CTCCCCGGAACATCGGCAAGGATGAGATCACCTCCTACACCACTGGATTGCCCTGCTGGCTGACTGCCCCATCACTGCACACATGTATGA GGATGTGGCACTGATCAAAGACCATACACTTGTCAATTCCTTGATTCGTGTGCTGCAGACATTGCAGGAGTTCAACATCACGCTGGAGAC GTCCCTTGTCAAGGGCATCGACATCTGACCTCCCAGCACCAGCCAGCAGCAGGACTGAGAAAGACTCACCCTGCAGCTCTGACCTTTTTT CCCAAAGGGACTTAAGCGATTGTGCAGGAGTAGGAGACAAAATGTACACTCACTGTAAAAAGAAAACTAGAGGATTTTTGGAATAAATAA >In-frame_ENST00000313726_ENST00000530044_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(amino acids)=91AA_start in transcript=849_stop in transcript=574 MSPTPAQSLKSLWEKRSELQGESFSVLLLAGAGRSDVDALDKGRLQRDVELLQCLQHTNQGIDKCMVFDQCHILIHVCSDGAVSQQGNPV -------------------------------------------------------------- >In-frame_ENST00000313726_ENST00000527700_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(transcript)=949nt_BP=429nt GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGTGAGAAAGAAAGAAAAAGAGAGCGCCCTTGTGCACGCGCTAGGCCAAGAGCGC GCCGCTGTGCGCGCGCCCGCCTAGCGAGGACAGGGTCTCCATGACAACCGGCCTGGCCGGCTAGCAGTGCTCTGCTCACTTGGCTGCGAG GAGCGCCACGAAAGGTCAGAGGAAGGAGCTGTGGGAAGCTCGCAGCAGGTATCGGAGCTTAAGCCAGTGGATTTGGGGGCCCTGGGCTCC CTAGCCGGCTGCGGTGTGAGAATGGAGTGGGCAGGAAAGCAGCGGGACTTTCAGGGCTCTGGGTTTGCAGAGAGCCGAAATGACCATGAC TGCCAACAAGAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTCGGGGGACTCTGAGCAGAAAAAGCACAAACCTATTATG AGACATTAGAGAAGAATGAAGTAGTCCCTGAGGAAAACTGGCATACAAGAGCCCGGAACTTCTGCCGATTTGTCACTGCAATCAACAATA CTCCCCGGAACATCGGCAAGGATGGCAAGTTTCAGATGCTGGTGTGCTTGGGAGCCAGAGATCACCTCCTACACCACTGGATTGCCCTGC TGGCTGACTGCCCCATCACTGCACACATGTATGAGGATGTGGCACTGATCAAAGACCATACACTTGTCAATTCCTTGATTCGTGTGCTGC AGACATTGCAGGAGTTCAACATCACGCTGGAGACGTCCCTTGTCAAGGGCATCGACATCTGACCTCCCAGCACCAGCCAGCAGCAGGACT GAGAAAGACTCACCCTGCAGCTCTGACCTTTTTTCCCAAAGGGACTTAAGCGATTGTGCAGGAGTAGGAGACAAAATGTACACTCACTGT >In-frame_ENST00000313726_ENST00000527700_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(amino acids)=91AA_start in transcript=883_stop in transcript=608 MSPTPAQSLKSLWEKRSELQGESFSVLLLAGAGRSDVDALDKGRLQRDVELLQCLQHTNQGIDKCMVFDQCHILIHVCSDGAVSQQGNPV -------------------------------------------------------------- >In-frame_ENST00000357665_ENST00000328194_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(transcript)=1439nt_BP=240nt CACAGATTTCACACCCTTTGGAGAGTTTCTTTCTTGGATAATTCAGGAAGATGAGAGACTGCTTAGGCGCCACCACTAGTACCATGAGTC CCTGCACTGGTTAAAGCCATCGCCACAACCTGGACAGGCAGCAAGGGCTCTGGGTTTGCAGAGAGCCGAAATGACCATGACTGCCAACAA GAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTCGGGGGACTCTGAGCAGAAAAAGCACAAACCTATTATGAGACATTAG AGAAGAATGAAGTAGTCCCTGAGGAAAACTGGCATACAAGAGCCCGGAACTTCTGCCGATTTGTCACTGCAATCAACAATACTCCCCGGA ACATCGGCAAGGATGGCAAGTTTCAGATGCTGGTGTGCTTGGGAGCCAGAGATCACCTCCTACACCACTGGATTGCCCTGCTGGCTGACT GCCCCATCACTGCACACATGTATGAGGATGTGGCACTGATCAAAGACCATACACTTGTCAATTCCTTGATTCGTGTGCTGCAGACATTGC AGGAGTTCAACATCACGCTGGAGACGTCCCTTGTCAAGGGCATCGACATCTGACCTCCCAGCACCAGCCAGCAGCAGGACTGAGAAAGAC TCACCCTGCAGCTCTGACCTTTTTTCCCAAAGGGACTTAAGCGATTGTGCAGGAGTAGGAGACAAAATGTACACTCACTGTAAAAAGAAA ACTAGAGGATTTTTGGAATAAATAATCTATTTTAGAGTTTATTTGCTGATTTGCTTTTTACACACTTTCATGTGAAAGAGTGATAGGGAG AGGGAGCGAGGCTGGTGCCGCTTATTTTGAAGCTGGTGCCCTCCCTCGCCGTGGCCACATGCTGGAAGCCTGAGGCCTCCCTGGACTGAG CCTGTGGCACTGCGTGCGGGACAGTTATGTTTCCTTGCCCCGTCGCATTAATGAGGCCCTTCCACATCATTTTTAAACTAATGTTTTTCT ATATTAACATTATTATGGATATTTGGCTTTCATAGGCCACACACAGGTGTGCTGCGCGGGAAGCCCCATGCTCCAATCAAAGGGATTTTT AGTAGTGCCTCTAAGCAAGCACCGATGAGTCAGTCCCACGTATTTTCTTTTTTGTCAGTATTGTTTGGGAAGGAGACATGCCGGGATGTG TCATCGTGCCAAATACCACATTTCCTGTTGGCACAGTTTCACAGAAGTAAACATAAGCATGTTTTAACAGGTTTTTCTTTTCTTTTTTCT TTTTTAAAATGTTTTATTTATTTAACCCGCCATTGTGTGTTTTTAAGTATTTTCTTTTTTTAAGGAAAGGAAAAGCTTGTCACAATCTAA >In-frame_ENST00000357665_ENST00000328194_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(amino acids)=93AA_start in transcript=1041_stop in transcript=1322 MRGKPHAPIKGIFSSASKQAPMSQSHVFSFLSVLFGKETCRDVSSCQIPHFLLAQFHRSKHKHVLTGFSFLFSFLKCFIYLTRHCVFLSI -------------------------------------------------------------- >In-frame_ENST00000357665_ENST00000530044_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(transcript)=771nt_BP=240nt CACAGATTTCACACCCTTTGGAGAGTTTCTTTCTTGGATAATTCAGGAAGATGAGAGACTGCTTAGGCGCCACCACTAGTACCATGAGTC CCTGCACTGGTTAAAGCCATCGCCACAACCTGGACAGGCAGCAAGGGCTCTGGGTTTGCAGAGAGCCGAAATGACCATGACTGCCAACAA GAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTCGGGGGACTCTGAGCAGAAAAAGCACAAACCTATTATGAGACATTAG AGAAGAATGAAGTAGTCCCTGAGGAAAACTGGCATACAAGAGCCCGGAACTTCTGCCGATTTGTCACTGCAATCAACAATACTCCCCGGA ACATCGGCAAGGATGAGATCACCTCCTACACCACTGGATTGCCCTGCTGGCTGACTGCCCCATCACTGCACACATGTATGAGGATGTGGC ACTGATCAAAGACCATACACTTGTCAATTCCTTGATTCGTGTGCTGCAGACATTGCAGGAGTTCAACATCACGCTGGAGACGTCCCTTGT CAAGGGCATCGACATCTGACCTCCCAGCACCAGCCAGCAGCAGGACTGAGAAAGACTCACCCTGCAGCTCTGACCTTTTTTCCCAAAGGG ACTTAAGCGATTGTGCAGGAGTAGGAGACAAAATGTACACTCACTGTAAAAAGAAAACTAGAGGATTTTTGGAATAAATAATCTATTTTA >In-frame_ENST00000357665_ENST00000530044_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(amino acids)=91AA_start in transcript=660_stop in transcript=385 MSPTPAQSLKSLWEKRSELQGESFSVLLLAGAGRSDVDALDKGRLQRDVELLQCLQHTNQGIDKCMVFDQCHILIHVCSDGAVSQQGNPV -------------------------------------------------------------- >In-frame_ENST00000357665_ENST00000527700_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(transcript)=760nt_BP=240nt CACAGATTTCACACCCTTTGGAGAGTTTCTTTCTTGGATAATTCAGGAAGATGAGAGACTGCTTAGGCGCCACCACTAGTACCATGAGTC CCTGCACTGGTTAAAGCCATCGCCACAACCTGGACAGGCAGCAAGGGCTCTGGGTTTGCAGAGAGCCGAAATGACCATGACTGCCAACAA GAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTCGGGGGACTCTGAGCAGAAAAAGCACAAACCTATTATGAGACATTAG AGAAGAATGAAGTAGTCCCTGAGGAAAACTGGCATACAAGAGCCCGGAACTTCTGCCGATTTGTCACTGCAATCAACAATACTCCCCGGA ACATCGGCAAGGATGGCAAGTTTCAGATGCTGGTGTGCTTGGGAGCCAGAGATCACCTCCTACACCACTGGATTGCCCTGCTGGCTGACT GCCCCATCACTGCACACATGTATGAGGATGTGGCACTGATCAAAGACCATACACTTGTCAATTCCTTGATTCGTGTGCTGCAGACATTGC AGGAGTTCAACATCACGCTGGAGACGTCCCTTGTCAAGGGCATCGACATCTGACCTCCCAGCACCAGCCAGCAGCAGGACTGAGAAAGAC TCACCCTGCAGCTCTGACCTTTTTTCCCAAAGGGACTTAAGCGATTGTGCAGGAGTAGGAGACAAAATGTACACTCACTGTAAAAAGAAA >In-frame_ENST00000357665_ENST00000527700_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(amino acids)=91AA_start in transcript=694_stop in transcript=419 MSPTPAQSLKSLWEKRSELQGESFSVLLLAGAGRSDVDALDKGRLQRDVELLQCLQHTNQGIDKCMVFDQCHILIHVCSDGAVSQQGNPV -------------------------------------------------------------- >In-frame_ENST00000530438_ENST00000328194_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(transcript)=1804nt_BP=605nt GAAGAAAACAAGTCCACTCACTGTCTTCTCCCTTCTCCCCTCTGAGCTGTTCAAGCAAGTTCCCAGGAGCAGTTCAGAGCCCCTGTTGGA CTGGAAGGGAGGTAGGAGGAGTGGAATGCATGCAAAAACCGAGCTGATCAAAAGACAGTGCTGTTTCATGGAAGCCTCCCAGAACTGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGTGAGAAAGAAAGAAAAAGAGAGCGCCCTTGTGCACGCGCTAGGCCAAGAGCGCGCCG CTGTGCGCGCGCCCGCCTAGCGAGGACAGGGTCTCCATGACAACCGGCCTGGCCGGCTAGCAGTGCTCTGCTCACTTGGCTGCGAGGAGC GCCACGAAAGGTCAGAGGAAGGAGCTGTGGGAAGCTCGCAGCAGGTATCGGAGCTTAAGCCAGTGGATTTGGGGGCCCTGGGCTCCCTAG CCGGCTGCGGTGTGAGAATGGAGTGGGCAGGAAAGCAGCGGGACTTTCAGGGCTCTGGGTTTGCAGAGAGCCGAAATGACCATGACTGCC AACAAGAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTCGGGGGACTCTGAGCAGAAAAAGCACAAACCTATTATGAGAC ATTAGAGAAGAATGAAGTAGTCCCTGAGGAAAACTGGCATACAAGAGCCCGGAACTTCTGCCGATTTGTCACTGCAATCAACAATACTCC CCGGAACATCGGCAAGGATGGCAAGTTTCAGATGCTGGTGTGCTTGGGAGCCAGAGATCACCTCCTACACCACTGGATTGCCCTGCTGGC TGACTGCCCCATCACTGCACACATGTATGAGGATGTGGCACTGATCAAAGACCATACACTTGTCAATTCCTTGATTCGTGTGCTGCAGAC ATTGCAGGAGTTCAACATCACGCTGGAGACGTCCCTTGTCAAGGGCATCGACATCTGACCTCCCAGCACCAGCCAGCAGCAGGACTGAGA AAGACTCACCCTGCAGCTCTGACCTTTTTTCCCAAAGGGACTTAAGCGATTGTGCAGGAGTAGGAGACAAAATGTACACTCACTGTAAAA AGAAAACTAGAGGATTTTTGGAATAAATAATCTATTTTAGAGTTTATTTGCTGATTTGCTTTTTACACACTTTCATGTGAAAGAGTGATA GGGAGAGGGAGCGAGGCTGGTGCCGCTTATTTTGAAGCTGGTGCCCTCCCTCGCCGTGGCCACATGCTGGAAGCCTGAGGCCTCCCTGGA CTGAGCCTGTGGCACTGCGTGCGGGACAGTTATGTTTCCTTGCCCCGTCGCATTAATGAGGCCCTTCCACATCATTTTTAAACTAATGTT TTTCTATATTAACATTATTATGGATATTTGGCTTTCATAGGCCACACACAGGTGTGCTGCGCGGGAAGCCCCATGCTCCAATCAAAGGGA TTTTTAGTAGTGCCTCTAAGCAAGCACCGATGAGTCAGTCCCACGTATTTTCTTTTTTGTCAGTATTGTTTGGGAAGGAGACATGCCGGG ATGTGTCATCGTGCCAAATACCACATTTCCTGTTGGCACAGTTTCACAGAAGTAAACATAAGCATGTTTTAACAGGTTTTTCTTTTCTTT TTTCTTTTTTAAAATGTTTTATTTATTTAACCCGCCATTGTGTGTTTTTAAGTATTTTCTTTTTTTAAGGAAAGGAAAAGCTTGTCACAA TCTAACTGGCTATGTTATTATTATTAAATTTATGTTTTGCAACTTAGAAACCAGCTACAGTATGGCCCACTTAATAAAACACCTGAAACA >In-frame_ENST00000530438_ENST00000328194_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(amino acids)=125AA_start in transcript=374_stop in transcript=0 MTFRGAPRSQVSRALLAGQAGCHGDPVLARRARAQRRALGLARAQGRSLFLSFSLSLSLSLSLSLSQFWEASMKQHCLLISSVFACIPLL -------------------------------------------------------------- >In-frame_ENST00000530438_ENST00000530044_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(transcript)=1136nt_BP=605nt GAAGAAAACAAGTCCACTCACTGTCTTCTCCCTTCTCCCCTCTGAGCTGTTCAAGCAAGTTCCCAGGAGCAGTTCAGAGCCCCTGTTGGA CTGGAAGGGAGGTAGGAGGAGTGGAATGCATGCAAAAACCGAGCTGATCAAAAGACAGTGCTGTTTCATGGAAGCCTCCCAGAACTGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGTGAGAAAGAAAGAAAAAGAGAGCGCCCTTGTGCACGCGCTAGGCCAAGAGCGCGCCG CTGTGCGCGCGCCCGCCTAGCGAGGACAGGGTCTCCATGACAACCGGCCTGGCCGGCTAGCAGTGCTCTGCTCACTTGGCTGCGAGGAGC GCCACGAAAGGTCAGAGGAAGGAGCTGTGGGAAGCTCGCAGCAGGTATCGGAGCTTAAGCCAGTGGATTTGGGGGCCCTGGGCTCCCTAG CCGGCTGCGGTGTGAGAATGGAGTGGGCAGGAAAGCAGCGGGACTTTCAGGGCTCTGGGTTTGCAGAGAGCCGAAATGACCATGACTGCC AACAAGAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTCGGGGGACTCTGAGCAGAAAAAGCACAAACCTATTATGAGAC ATTAGAGAAGAATGAAGTAGTCCCTGAGGAAAACTGGCATACAAGAGCCCGGAACTTCTGCCGATTTGTCACTGCAATCAACAATACTCC CCGGAACATCGGCAAGGATGAGATCACCTCCTACACCACTGGATTGCCCTGCTGGCTGACTGCCCCATCACTGCACACATGTATGAGGAT GTGGCACTGATCAAAGACCATACACTTGTCAATTCCTTGATTCGTGTGCTGCAGACATTGCAGGAGTTCAACATCACGCTGGAGACGTCC CTTGTCAAGGGCATCGACATCTGACCTCCCAGCACCAGCCAGCAGCAGGACTGAGAAAGACTCACCCTGCAGCTCTGACCTTTTTTCCCA AAGGGACTTAAGCGATTGTGCAGGAGTAGGAGACAAAATGTACACTCACTGTAAAAAGAAAACTAGAGGATTTTTGGAATAAATAATCTA >In-frame_ENST00000530438_ENST00000530044_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(amino acids)=91AA_start in transcript=1025_stop in transcript=750 MSPTPAQSLKSLWEKRSELQGESFSVLLLAGAGRSDVDALDKGRLQRDVELLQCLQHTNQGIDKCMVFDQCHILIHVCSDGAVSQQGNPV -------------------------------------------------------------- >In-frame_ENST00000530438_ENST00000527700_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(transcript)=1125nt_BP=605nt GAAGAAAACAAGTCCACTCACTGTCTTCTCCCTTCTCCCCTCTGAGCTGTTCAAGCAAGTTCCCAGGAGCAGTTCAGAGCCCCTGTTGGA CTGGAAGGGAGGTAGGAGGAGTGGAATGCATGCAAAAACCGAGCTGATCAAAAGACAGTGCTGTTTCATGGAAGCCTCCCAGAACTGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGTGAGAAAGAAAGAAAAAGAGAGCGCCCTTGTGCACGCGCTAGGCCAAGAGCGCGCCG CTGTGCGCGCGCCCGCCTAGCGAGGACAGGGTCTCCATGACAACCGGCCTGGCCGGCTAGCAGTGCTCTGCTCACTTGGCTGCGAGGAGC GCCACGAAAGGTCAGAGGAAGGAGCTGTGGGAAGCTCGCAGCAGGTATCGGAGCTTAAGCCAGTGGATTTGGGGGCCCTGGGCTCCCTAG CCGGCTGCGGTGTGAGAATGGAGTGGGCAGGAAAGCAGCGGGACTTTCAGGGCTCTGGGTTTGCAGAGAGCCGAAATGACCATGACTGCC AACAAGAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTCGGGGGACTCTGAGCAGAAAAAGCACAAACCTATTATGAGAC ATTAGAGAAGAATGAAGTAGTCCCTGAGGAAAACTGGCATACAAGAGCCCGGAACTTCTGCCGATTTGTCACTGCAATCAACAATACTCC CCGGAACATCGGCAAGGATGGCAAGTTTCAGATGCTGGTGTGCTTGGGAGCCAGAGATCACCTCCTACACCACTGGATTGCCCTGCTGGC TGACTGCCCCATCACTGCACACATGTATGAGGATGTGGCACTGATCAAAGACCATACACTTGTCAATTCCTTGATTCGTGTGCTGCAGAC ATTGCAGGAGTTCAACATCACGCTGGAGACGTCCCTTGTCAAGGGCATCGACATCTGACCTCCCAGCACCAGCCAGCAGCAGGACTGAGA AAGACTCACCCTGCAGCTCTGACCTTTTTTCCCAAAGGGACTTAAGCGATTGTGCAGGAGTAGGAGACAAAATGTACACTCACTGTAAAA >In-frame_ENST00000530438_ENST00000527700_TCGA-B6-A0X1-01A_ST5_chr11_8772168_-_DENND5A_chr11_9163655_length(amino acids)=125AA_start in transcript=374_stop in transcript=0 MTFRGAPRSQVSRALLAGQAGCHGDPVLARRARAQRRALGLARAQGRSLFLSFSLSLSLSLSLSLSQFWEASMKQHCLLISSVFACIPLL -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for ST5-DENND5A |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000313726 | - | 2 | 20 | 401_447 | 26.666666666666668 | 1138.0 | ABL1 |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000357665 | - | 3 | 21 | 401_447 | 26.666666666666668 | 1138.0 | ABL1 |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000526757 | - | 2 | 19 | 401_447 | 26.666666666666668 | 718.0 | ABL1 |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000530438 | - | 2 | 19 | 401_447 | 26.666666666666668 | 718.0 | ABL1 |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000530991 | - | 1 | 17 | 401_447 | 0 | 610.0 | ABL1 |
Hgene | ST5 | chr11:8772168 | chr11:9163655 | ENST00000534127 | - | 5 | 23 | 401_447 | 26.666666666666668 | 1138.0 | ABL1 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ST5-DENND5A |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for ST5-DENND5A |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | DENND5A | C0543888 | Epileptic encephalopathy | 2 | GENOMICS_ENGLAND |
Tgene | DENND5A | C4310635 | EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 49 | 2 | CTD_human;GENOMICS_ENGLAND;UNIPROT |