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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:ST6GALNAC6-APBB2 (FusionGDB2 ID:86406) |
Fusion Gene Summary for ST6GALNAC6-APBB2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: ST6GALNAC6-APBB2 | Fusion gene ID: 86406 | Hgene | Tgene | Gene symbol | ST6GALNAC6 | APBB2 | Gene ID | 30815 | 323 |
Gene name | ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 | amyloid beta precursor protein binding family B member 2 | |
Synonyms | SIAT7-F|SIAT7F|ST6GALNACVI | FE65L|FE65L1 | |
Cytomap | 9q34.11 | 4p14-p13 | |
Type of gene | protein-coding | protein-coding | |
Description | alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VIST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6ST6 - | amyloid-beta A4 precursor protein-binding family B member 2Fe65-like 1protein Fe65-like 1 | |
Modification date | 20200320 | 20200327 | |
UniProtAcc | . | Q92870 | |
Ensembl transtripts involved in fusion gene | ENST00000373146, ENST00000373141, ENST00000291839, ENST00000373142, ENST00000373144, ENST00000485320, ENST00000542456, | ENST00000295974, ENST00000513140, ENST00000508593, ENST00000506352, ENST00000511572, ENST00000543538, ENST00000502841, ENST00000504305, | |
Fusion gene scores | * DoF score | 3 X 3 X 2=18 | 12 X 12 X 9=1296 |
# samples | 2 | 17 | |
** MAII score | log2(2/18*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(17/1296*10)=-2.93045906674692 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ST6GALNAC6 [Title/Abstract] AND APBB2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ST6GALNAC6(130652915)-APBB2(40936716), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ST6GALNAC6 | GO:0006677 | glycosylceramide metabolic process | 17123352 |
Hgene | ST6GALNAC6 | GO:0006687 | glycosphingolipid metabolic process | 17123352 |
Hgene | ST6GALNAC6 | GO:0009100 | glycoprotein metabolic process | 17123352 |
Fusion gene breakpoints across ST6GALNAC6 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across APBB2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | Non-Cancer | TCGA-EJ-7785-11A | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
ChimerDB4 | Non-Cancer | TCGA-EJ-7785-11A | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
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Fusion Gene ORF analysis for ST6GALNAC6-APBB2 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000373146 | ENST00000295974 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
Frame-shift | ENST00000373146 | ENST00000513140 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
Frame-shift | ENST00000373146 | ENST00000508593 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
Frame-shift | ENST00000373146 | ENST00000506352 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000373146 | ENST00000511572 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000373146 | ENST00000543538 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000373146 | ENST00000502841 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000373146 | ENST00000504305 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
In-frame | ENST00000373141 | ENST00000295974 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
In-frame | ENST00000373141 | ENST00000513140 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
In-frame | ENST00000373141 | ENST00000508593 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
In-frame | ENST00000373141 | ENST00000506352 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000373141 | ENST00000511572 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000373141 | ENST00000543538 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000373141 | ENST00000502841 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000373141 | ENST00000504305 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
Frame-shift | ENST00000291839 | ENST00000295974 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
Frame-shift | ENST00000291839 | ENST00000513140 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
Frame-shift | ENST00000291839 | ENST00000508593 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
Frame-shift | ENST00000291839 | ENST00000506352 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000291839 | ENST00000511572 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000291839 | ENST00000543538 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000291839 | ENST00000502841 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000291839 | ENST00000504305 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
Frame-shift | ENST00000373142 | ENST00000295974 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
Frame-shift | ENST00000373142 | ENST00000513140 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
Frame-shift | ENST00000373142 | ENST00000508593 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
Frame-shift | ENST00000373142 | ENST00000506352 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000373142 | ENST00000511572 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000373142 | ENST00000543538 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000373142 | ENST00000502841 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000373142 | ENST00000504305 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
In-frame | ENST00000373144 | ENST00000295974 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
In-frame | ENST00000373144 | ENST00000513140 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
In-frame | ENST00000373144 | ENST00000508593 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
In-frame | ENST00000373144 | ENST00000506352 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000373144 | ENST00000511572 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000373144 | ENST00000543538 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000373144 | ENST00000502841 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
5CDS-intron | ENST00000373144 | ENST00000504305 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
intron-3CDS | ENST00000485320 | ENST00000295974 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
intron-3CDS | ENST00000485320 | ENST00000513140 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
intron-3CDS | ENST00000485320 | ENST00000508593 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
intron-3CDS | ENST00000485320 | ENST00000506352 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
intron-intron | ENST00000485320 | ENST00000511572 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
intron-intron | ENST00000485320 | ENST00000543538 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
intron-intron | ENST00000485320 | ENST00000502841 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
intron-intron | ENST00000485320 | ENST00000504305 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
intron-3CDS | ENST00000542456 | ENST00000295974 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
intron-3CDS | ENST00000542456 | ENST00000513140 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
intron-3CDS | ENST00000542456 | ENST00000508593 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
intron-3CDS | ENST00000542456 | ENST00000506352 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
intron-intron | ENST00000542456 | ENST00000511572 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
intron-intron | ENST00000542456 | ENST00000543538 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
intron-intron | ENST00000542456 | ENST00000502841 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
intron-intron | ENST00000542456 | ENST00000504305 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000373141 | ST6GALNAC6 | chr9 | 130652915 | - | ENST00000295974 | APBB2 | chr4 | 40936716 | - | 8087 | 849 | 852 | 2021 | 389 |
ENST00000373141 | ST6GALNAC6 | chr9 | 130652915 | - | ENST00000513140 | APBB2 | chr4 | 40936716 | - | 3504 | 849 | 852 | 2018 | 388 |
ENST00000373141 | ST6GALNAC6 | chr9 | 130652915 | - | ENST00000508593 | APBB2 | chr4 | 40936716 | - | 2790 | 849 | 852 | 2021 | 389 |
ENST00000373141 | ST6GALNAC6 | chr9 | 130652915 | - | ENST00000506352 | APBB2 | chr4 | 40936716 | - | 2497 | 849 | 852 | 2021 | 389 |
ENST00000373144 | ST6GALNAC6 | chr9 | 130652915 | - | ENST00000295974 | APBB2 | chr4 | 40936716 | - | 8069 | 831 | 834 | 2003 | 389 |
ENST00000373144 | ST6GALNAC6 | chr9 | 130652915 | - | ENST00000513140 | APBB2 | chr4 | 40936716 | - | 3486 | 831 | 834 | 2000 | 388 |
ENST00000373144 | ST6GALNAC6 | chr9 | 130652915 | - | ENST00000508593 | APBB2 | chr4 | 40936716 | - | 2772 | 831 | 834 | 2003 | 389 |
ENST00000373144 | ST6GALNAC6 | chr9 | 130652915 | - | ENST00000506352 | APBB2 | chr4 | 40936716 | - | 2479 | 831 | 834 | 2003 | 389 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000373141 | ENST00000295974 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - | 0.000906855 | 0.9990932 |
ENST00000373141 | ENST00000513140 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - | 0.001583571 | 0.9984164 |
ENST00000373141 | ENST00000508593 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - | 0.004234687 | 0.9957653 |
ENST00000373141 | ENST00000506352 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - | 0.004933021 | 0.995067 |
ENST00000373144 | ENST00000295974 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - | 0.000845711 | 0.9991543 |
ENST00000373144 | ENST00000513140 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - | 0.001350206 | 0.9986498 |
ENST00000373144 | ENST00000508593 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - | 0.003404857 | 0.9965951 |
ENST00000373144 | ENST00000506352 | ST6GALNAC6 | chr9 | 130652915 | - | APBB2 | chr4 | 40936716 | - | 0.004013544 | 0.9959864 |
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Fusion Genomic Features for ST6GALNAC6-APBB2 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for ST6GALNAC6-APBB2 |
Go to FGviewer for the breakpoints of chr9:130652915-chr4:40936716 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | APBB2 |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: May modulate the internalization of amyloid-beta precursor protein. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000291839 | - | 4 | 6 | 112_115 | 234.66666666666666 | 334.0 | Compositional bias | Note=Poly-Ser |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000291839 | - | 4 | 6 | 30_33 | 234.66666666666666 | 334.0 | Compositional bias | Note=Poly-Arg |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373141 | - | 4 | 6 | 112_115 | 200.66666666666666 | 300.0 | Compositional bias | Note=Poly-Ser |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373141 | - | 4 | 6 | 30_33 | 200.66666666666666 | 300.0 | Compositional bias | Note=Poly-Arg |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373142 | - | 5 | 7 | 112_115 | 234.66666666666666 | 375.0 | Compositional bias | Note=Poly-Ser |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373142 | - | 5 | 7 | 30_33 | 234.66666666666666 | 375.0 | Compositional bias | Note=Poly-Arg |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373144 | - | 4 | 6 | 112_115 | 200.66666666666666 | 300.0 | Compositional bias | Note=Poly-Ser |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373144 | - | 4 | 6 | 30_33 | 200.66666666666666 | 300.0 | Compositional bias | Note=Poly-Arg |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373146 | - | 5 | 7 | 112_115 | 234.66666666666666 | 334.0 | Compositional bias | Note=Poly-Ser |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373146 | - | 5 | 7 | 30_33 | 234.66666666666666 | 334.0 | Compositional bias | Note=Poly-Arg |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000291839 | - | 4 | 6 | 1_43 | 234.66666666666666 | 334.0 | Topological domain | Cytoplasmic |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373141 | - | 4 | 6 | 1_43 | 200.66666666666666 | 300.0 | Topological domain | Cytoplasmic |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373142 | - | 5 | 7 | 1_43 | 234.66666666666666 | 375.0 | Topological domain | Cytoplasmic |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373144 | - | 4 | 6 | 1_43 | 200.66666666666666 | 300.0 | Topological domain | Cytoplasmic |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373146 | - | 5 | 7 | 1_43 | 234.66666666666666 | 334.0 | Topological domain | Cytoplasmic |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000291839 | - | 4 | 6 | 44_64 | 234.66666666666666 | 334.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373141 | - | 4 | 6 | 44_64 | 200.66666666666666 | 300.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373142 | - | 5 | 7 | 44_64 | 234.66666666666666 | 375.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373144 | - | 4 | 6 | 44_64 | 200.66666666666666 | 300.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373146 | - | 5 | 7 | 44_64 | 234.66666666666666 | 334.0 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000295974 | 7 | 18 | 413_578 | 368.0 | 759.0 | Domain | PID 1 | |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000295974 | 7 | 18 | 584_736 | 368.0 | 759.0 | Domain | PID 2 | |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000502841 | 0 | 7 | 290_322 | 0 | 211.0 | Domain | WW | |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000502841 | 0 | 7 | 413_578 | 0 | 211.0 | Domain | PID 1 | |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000502841 | 0 | 7 | 584_736 | 0 | 211.0 | Domain | PID 2 | |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000504305 | 0 | 8 | 290_322 | 0 | 211.0 | Domain | WW | |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000504305 | 0 | 8 | 413_578 | 0 | 211.0 | Domain | PID 1 | |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000504305 | 0 | 8 | 584_736 | 0 | 211.0 | Domain | PID 2 | |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000508593 | 7 | 18 | 413_578 | 369.0 | 760.0 | Domain | PID 1 | |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000508593 | 7 | 18 | 584_736 | 369.0 | 760.0 | Domain | PID 2 | |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000513140 | 6 | 17 | 413_578 | 347.0 | 737.0 | Domain | PID 1 | |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000513140 | 6 | 17 | 584_736 | 347.0 | 737.0 | Domain | PID 2 | |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000543538 | 0 | 7 | 290_322 | 0 | 211.0 | Domain | WW | |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000543538 | 0 | 7 | 413_578 | 0 | 211.0 | Domain | PID 1 | |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000543538 | 0 | 7 | 584_736 | 0 | 211.0 | Domain | PID 2 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000291839 | - | 4 | 6 | 65_333 | 234.66666666666666 | 334.0 | Topological domain | Lumenal |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373141 | - | 4 | 6 | 65_333 | 200.66666666666666 | 300.0 | Topological domain | Lumenal |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373142 | - | 5 | 7 | 65_333 | 234.66666666666666 | 375.0 | Topological domain | Lumenal |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373144 | - | 4 | 6 | 65_333 | 200.66666666666666 | 300.0 | Topological domain | Lumenal |
Hgene | ST6GALNAC6 | chr9:130652915 | chr4:40936716 | ENST00000373146 | - | 5 | 7 | 65_333 | 234.66666666666666 | 334.0 | Topological domain | Lumenal |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000295974 | 7 | 18 | 290_322 | 368.0 | 759.0 | Domain | WW | |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000508593 | 7 | 18 | 290_322 | 369.0 | 760.0 | Domain | WW | |
Tgene | APBB2 | chr9:130652915 | chr4:40936716 | ENST00000513140 | 6 | 17 | 290_322 | 347.0 | 737.0 | Domain | WW |
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Fusion Gene Sequence for ST6GALNAC6-APBB2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000373141_ENST00000295974_TCGA-EJ-7785-11A_ST6GALNAC6_chr9_130652915_-_APBB2_chr4_40936716_length(transcript)=8087nt_BP=849nt GGCTATTCCTGGTGGCCGTGTAGGAGTAAACAGCGGCTAGGTCAAAGGGCTCAGAGAATACAGGAACTGAGAGGCCCCTGGAGCAGGGGA CGGAGCTGAGGAGGGCCCCCTAAGCCCCAGTTTCTTCCCTCTGCACTCCTGCCCGCCCTGCCCCCGGCCTGTCTGCTGGAGGTGTGAACC CACATCCCTGCCCCCAGGGCCACCTGCAGGACGCCGACACCTACCCCTCAGCAGACGCCGGAGAGAAATGAGTAGCAACAAAGAGCAGCG GTCAGCAGTGTTCGTGATCCTCTTTGCCCTCATCACCATCCTCATCCTCTACAGCTCCAACAGTGCCAATGAGGTCTTCCATTACGGCTC CCTGCGGGGCCGTAGCCGCCGACCTGTCAACCTCAAGAAGTGGAGCATCACTGACGGCTATGTCCCCATTCTCGGCAACAAGACACTGCC CTCTCGGTGCCACCAGTGTGTGATTGTCAGCAGCTCCAGCCACCTGCTGGGCACCAAGCTGGGCCCTGAGATCGAGCGGGCTGAGTGTAC AATCCGCATGAATGATGCACCCACCACTGGCTACTCAGCTGATGTGGGCAACAAGACCACCTACCGCGTCGTGGCCCATTCCAGTGTGTT CCGCGTGCTGAGGAGGCCCCAGGAGTTTGTCAACCGGACCCCTGAAACCGTGTTCATCTTCTGGGGGCCCCCGAGCAAGATGCAGAAGCC CCAGGGCAGCCTCGTGCGTGTGATCCAGCGAGCGGGCCTGGTGTTCCCCAACATGGAAGCATATGCCGTCTCTCCCGGCCGCATGCGGCA ATTTGACGACCTCTTCCGGGGTGAGACGGGCAAGGACAGGATTTGCATGCAGCCACTGTTAACCCGGACCCCAGTTTAAAAGAGTTTGAA GGAGCAACCCTACGCTATGCATCTTTGAAACTCAGAAATGCCCCACACCCTGATGATGATGATTCTTGTAGTATCAACAGTGACCCAGAA GCCAAGTGTTTTGCTGTGCGTTCTCTGGGATGGGTAGAGATGGCAGAAGAGGACCTCGCCCCCGGTAAAAGTAGTGTTGCGGTCAACAAC TGCATCAGGCAACTTTCCTACTGCAAAAATGACATCCGAGACACAGTCGGGATTTGGGGAGAGGGGAAAGACATGTACCTGATCCTGGAG AATGACATGCTCAGCCTGGTGGACCCCATGGACCGCAGCGTGCTGCACTCGCAGCCCATCGTCAGCATCCGCGTGTGGGGCGTGGGCCGC GACAATGGCCGGGATTTTGCTTATGTAGCAAGAGATAAAGATACAAGAATTTTGAAATGTCATGTATTTCGATGTGACACACCAGCAAAA GCCATTGCCACAAGTCTCCACGAGATCTGCTCCAAGATTATGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCAGCTCCTTACAGGAA AGGGCCAATGTGAACCTCGATGTCCCTTTGCAAGTAGATTTTCCAACACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTG GGCATGTTACCTGTAGACAAACCAGTCGGAATGGATATTTTGAACAGTGCCATAGAAAATCTTATGACCTCATCCAACAAGGAGGACTGG CTGTCAGTGAACATGAACGTGGCTGATGCCACTGTGACTGTCATCAGTGAAAAGAATGAAGAGGAAGTCTTAGTGGAATGTCGTGTGCGA TTCCTGTCCTTCATGGGTGTTGGGAAGGACGTCCACACATTTGCCTTCATCATGGACACGGGGAACCAGCGCTTTGAGTGCCACGTTTTC TGGTGCGAGCCTAATGCTGGTAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGCCAGGCCGCCT TCTCAGAAAGTTCGACCACCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTCACAACCAATGTAAAACGAGGGGTCTTATCCCTCATT GACACTTTGAAACAGAAACGCCCTGTCACCGAAATGCCATAGCTGCACATGCAAAAGGACTCGGCTATTTACCTGAAGATTGACTAGCTA CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATTTACCCTTAACCAAGCAGTGTTA GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGAATAATTTTTTTTGCTGTAAGTTACATCATGCGCAGT GGAAGGTCTTTTTCTTATTGTAAATATTGTGAACATTACTTAACTTCACACACACACAGAGAAGAGTGTGGCCCCACCCCTCCTAGTGAA CTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTTTAAGTCCTACA GCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGTTTGTGTTTT AATTTTTCATAAAATTGAACCTGTTGGTTGACAAAATTGGCTGTTGGCATCAGTATAGAAACCAACTGGCAGCTTTCCCTGACAAGCTCT TTGACACATGGACACCATTTCATGTCTACAGCTGTTTGTGGGATGTTGGAAAAAAATGAAACTTCAAAATTGATGAAAAACTAAATTCGA GGAATTAAAATCGAACAAAACATAGCCTTTCTTTTCCGATGGTTTTCAAACTGATTATTTTTAAAAGAGATTAATAAAATCATAATGCAT TTTGGGTGGGACATATTTCAAACTTCTGCCTTATATTGTACGGTGCAGCTAGAGAATTATAGTTCACTATGGCCATTCTCTACATAAACA TTAAGATGAAATACTCCTCATCAGCCTTTCATCCTTAGTTTGAGAATTAGCTGATATGCAATTTGAAGTTGAGGAAATATCATTGATATT TCTATCATGCACGATTATTTTAGATTTCTACCACCGTGTGATTTTTGCTAGTCCATGTGCTAGAGGTAAACGTTCTGCTGGAATTCTGCA TCCAGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCTGTCTGTCCATCATGTATTGTCCATGGCAACAAATTACATTAGGTTGAAC CTTTCCTTGATTTTATGTATTTAATATTAGAATTTGTTGGACTCAACTAGATATATTTTTTAATTTATATTTTTTCCATTTTACTTTGAA GATTTGAAATGTTCATACCTGAGCAAAGTCTACACAGGAGTAATGGACTGTTTAACAAGTTTCCCAAAACAGCATTTTCCTGCTCCTTCG TATGTAGGTGAGAAACTTAGCTGGAAAGACATACAAATTTAGACTCTCGTTGACATTGTCGTTTTAAAAGGAAGTTGCTAAGGCGATCAA TCTCAATATTAGTCTTGTTTACTTCTTCTTAATGTCAAAATTAACATTTACAACATCCAATTATAAAAGTAATGCTTTATGTTTATACAC TGCTATGTACTTGTCAAAATGGTTTCCACATTCTTATCACATCTGAGCCTTACCAGGTAGAGAAGGTACTAAATACACTTTAGAAGTAAA AATATGAAGTACCGAGAGGCTAAACCCACTGGCCTAAGATCTCACCAAAGTTCATGAAAACCAGGACTAGGACCCACGGCTCCCAAAGCC CGTTCTTGCTGTGTTGTGCTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATACTAAGAAGAGCAGGTATGGA AAGATCTATTGTCAGGGAATCTTAGAATTCCCTACACGAGTGGGAGAAAGATGTCCAAATTCCTTACGCAGTGGTATTCATGATGGTGCC CTATCTAAGTCCAGGACTGTTTTCCTACAGCGTGCCTCAAAAGTGTTGTAGAGGGCAGGATTCTACATTCACAGCCTGTTCCATCTACGA GATTTTCCAGATGCTACTTGTGGTAGACATTCCTAACTCATGGTACTTAGCCACCAGAGATCATGATGGAATGAGTGGGTGGCTTTTCTA CCTGCCATTCCCTCAGAATTCATGAGGGGTGGGGGACAGGGGGACCGGAATTGTCTTAGCACCCCAATGTTATGACAAAACTATGCTACT TTAGAAACGCAGTCTGTTTTTCACCAATTGACATACTACTGATCTGAAGTAACCAGTGCCATCATAAGAAATTACTGCATTAAGAAAATC CTTGCTGTGCCCTTTGAAAAGCTGTTCAGAAATCATTTACAGTGATCTTTCATCTCGGTCGCTGTAGTGAAACATTTTAGTGTGATAAAT TTCAAAATTCTAAACAAATTACCCACTTTTATATTGGAAATCTCTACCAGAACTCCCTCTTCATTTTTTAAGGCATACATTTGCTTGTTT TCAAGATCAAGAATTCTGAGCTAGCTTTAAGTAGCAAACTGATTTATATGTGCAATTATAGGATGCATTAAGATGAATGATAGCCTTTAC ATATTGAAAACTTTGCAGACGTTTTGTTTTGAAAATGGCATTGTATAGTAAATGCAAATTAATTTTGTAAAATTATGTTAAAGAGTATGT TCAGACACTTTCTGCCATGGCCAAAAAGTATGTATGAAAGTATGTGTGTATTTGTTTGTAAAAGGATGCCAATGTTTTACCTGATATCTT AGTGACACTTCAGTTATCTATGCATTCTTTAGATCTGTGATTCGGTAAACAGGCAGCCATGTTCACGATGCCTTCTATGTCTTACCATAT TTTTAATTAACCTGTTAAATACAGCTTAAAATATTTTTATTTTATTTATTCTATTTTTACTGAAATATACTGCATTATTGTGTTAATGTA TTATCTTTCCTGGATATTATCTCCCAGTGTATCCAGATCTAAGTAATCTCAGTGAACTATACATTGCCTAAAAAGTGGTTTTGTAATGAT TTGTAGTCACATTTCTATTGGGATATGTAGAAGAAAAGGCAAAATGCTTAAAGTTCCTTTTATTTTTTAAAAGCAGCTAGATAGACACAG ACTTGCCACCTCATACATCTGCTCCTTGGCAACATCAAGGGGAACGACTAGCCAACATGCCTATGGCTAAAAACTTTCCTTTGCAGACTA AAGCACTGCTTGGTGCTTCGTTTTTCTACCCTTCACAACATGTGTGATTTCATCTAAGAGATATATACATGTACACATGCCCTTTGTTTC CACCTGGATACAAGATCACTCATAGCTAATTAGGACCATTGTTTTTTGTTCATCTGTCTTGTTGCATGAAGGGACATTAGACCCATTTCC ATTAAAATAAGTTCTTGGTGATAAACTGTGGCACTGCTACTTCTTTTTAAATCCACTTTATGATTTCAAGATGGACACTTGTAAGATGAC TCGACACAAGGCCATTGCCTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCATGTCCCAGGCATTGCAACACAAACTCCTCA AGATTTCACCACAACATGACAAGCATTTTCCTAACTGATATTAGCACAATTTAACTAATAAGCCCCTTCGCTCTCTAGTTGGCCAGGCTT AACCTAATACACATCTAACGTGTGTGCCACACGGCCAGTAGAAAGTTTAACTTCAGCTTCAGGGCAAAGATACCCACTCACACCGTGTCA ACGCAAGCAGTAGTTCCTGGCCTCCAGAGCAGCTTACTTCCCCTGAAAGAACGCTTTGTTTTCCTTTATGCCCTTTTCCTGTTGACCACT TTTACACATTTAAATGTAATTTGTTGTGAGAATAAATTTAGCTGCATAAAACGTTCGGCTCATTTATCTGACATCTTAGTCACATATACA AGGAATAGAAATAGAAACTCGGTGTCTCTAGTTATTTTTAAATTATTCTTACCTCAGACTTCTTAGAAATCACTTTAGTAATGGAGCATT TTGCTTTGATTAGTTACTACATATTTCTGCCTGGTAAGAACTAGGAAGTAACTTCAAATTTTGAGTAATCACCCTGTACTTATTTGGTGA TCAGGAAGGCCAGCTGGCCTTCCGGACATAGAAGCCTATTTAGTCACCAACTCGAGTCTTTTGTAAGCGGTCTTGCTAGGATTGTGATAT TTTAGCACGAAGAAGTTTATCACTTCCTTTAAGAACCTGACATCAAAGAATAAAGAATAGAGGTGTACACACACTAAATCCAAAATGAAA GGTAACTAGAGAAATCAGTTGAATCTGGTTTAGCTTAACTGTTAGGCGCAGGAAGGCAGATAAACAGAATTTAAAGTATGTCCCCGCTTT TTGTTCATCTTGCACTTCCACAGTGGTTTCTCTCTAGTCAGTAACAAAATTTCATTATGGTTTCAGGCATTATATGGTGGTAAATAATTT CAGATTAAAAATGTGTTTGCTATTGGAGTATCTGAATACTAGTAATTTCATTATTTAGAATTTTGCAGCACTTTTATCTCAAGAAGAAGT CCAAGAATGTAAAATGCCAAATGAAACATGTCAGTGGAATCAATATTCTCCTTCATTAGAATTCCCTCATATTGCTTTTTTTTTTTTTCT TCAGACAGAGGAGTCTTACTCTGGAGTGCAGTGGTGTAATTTCAGCTCACCACAACCTCCACCTCCCAAGTTCAAGCAATTCTCGCCTCA GCCTCCTGAGTAGCTGGGATTACAGGCATGCACCGCCACGCCTGGCCAATTTGTATATTTTTAGTAGAGACAGGGTTTCGCCACGTTGGC CAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCCGCCCCAACCTCCCAAAGTATGTGAGCCACCACGTCCGGCCTCATATTGCTT TTATCCAAAATTCTTTTCCCTTTTCACTCTACCAAAGTATTTAAATAATCCTGTCCTTCATAGAAGATTCTCAAAGAAGAAAACTGCAGT GTAATTAATGAATGGTTTAATTCAGAATCTTCATATACTTCTAAAGAGAAAAATAATTTAGTGCCAAATGCATGTTAGGAGATAATCAAT GTAAGTGGCAACAAATTGTGACTTCACATGCTACTGTAGAGATCAGAAAATTATCCTAAACTATTCCATAACAATGAGACAACATCACAG AAAATACACTTGAAAATAAAAATCTCAAGACCAGCTACTTCTGGACAATGGAATACTTTTCAGTCTGGTATGGTGGAGGGCCCGAAAAGG ATAAGGGATTCTTATGATACACAATGGGATTCTTTACTGAACAATATGTTAAATTAAGCTGCACCGCCTTCCTTGAGGCATGGACTACCC TAACCAACCAGATAGAAATCTGGGTGGGATAAGAGGATGAGCCACACGCTATAATTTTAGGGCAAGGAGATAGTGTTTGATTTTCAAAAT CAGCAAAATAAGCTGAGCACTTTATATCTTTCTGTACAAGAGTGATAACATGAAGAATTCTTCTTCAGGGATTTAAAATACAATAAGCCT GGTTCAACTATAAAAAGTCTTGTTTCCTTTCTTCATTGACACTTTTTTTTTTTTTTTTTTTTTTTTGAGGCAAGGTCTCACTCTGCTTCC CAGGCTGGAGTGCAGTGGGGCAATATTGGCTCACTGCAACCTGCACCTCCTGGACTCAAGAGATCCTCGTACCTCAGCCTCCTAAGTAGC TGGGACTACAGGCGTGTCCCACCACACCCAGCTAATTTTTGTATTTTTTGTAGAGATGGGGTTTTGGGGTTTCGCCATGTTGTCCAGGCT CGTCTGGAACTCCGGTGCTCAAGTGGCGTGCCCACCTCAGCCTCCCAAACTGCTGAGATTACAGATGTGAGCCACTGCACCCAGCCCACT GACACGTTTTACTGATAAATGTAAATCTAAGCTAAAATAAAAATAATGTATTACCGCTATAATACAATTCACCATTCTCTTTTCTCACTT CAAGTAAGAAAGTAAAAATAGAATATCAGAGCTGAAGTAGACCTAAGTATTCATCTTGAAGAAGATAATATTCTAAAAATCATGCCACCT >In-frame_ENST00000373141_ENST00000295974_TCGA-EJ-7785-11A_ST6GALNAC6_chr9_130652915_-_APBB2_chr4_40936716_length(amino acids)=389AA_start in transcript=852_stop in transcript=2021 MHAATVNPDPSLKEFEGATLRYASLKLRNAPHPDDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKSSVAVNNCIRQLSYCKNDIRD TVGIWGEGKDMYLILENDMLSLVDPMDRSVLHSQPIVSIRVWGVGRDNGRDFAYVARDKDTRILKCHVFRCDTPAKAIATSLHEICSKIM AERKNAKALACSSLQERANVNLDVPLQVDFPTPKTELVQKFHVQYLGMLPVDKPVGMDILNSAIENLMTSSNKEDWLSVNMNVADATVTV ISEKNEEEVLVECRVRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAGNVSEAVQAACMLRYQKCLVARPPSQKVRPPPPPADSV -------------------------------------------------------------- >In-frame_ENST00000373141_ENST00000513140_TCGA-EJ-7785-11A_ST6GALNAC6_chr9_130652915_-_APBB2_chr4_40936716_length(transcript)=3504nt_BP=849nt GGCTATTCCTGGTGGCCGTGTAGGAGTAAACAGCGGCTAGGTCAAAGGGCTCAGAGAATACAGGAACTGAGAGGCCCCTGGAGCAGGGGA CGGAGCTGAGGAGGGCCCCCTAAGCCCCAGTTTCTTCCCTCTGCACTCCTGCCCGCCCTGCCCCCGGCCTGTCTGCTGGAGGTGTGAACC CACATCCCTGCCCCCAGGGCCACCTGCAGGACGCCGACACCTACCCCTCAGCAGACGCCGGAGAGAAATGAGTAGCAACAAAGAGCAGCG GTCAGCAGTGTTCGTGATCCTCTTTGCCCTCATCACCATCCTCATCCTCTACAGCTCCAACAGTGCCAATGAGGTCTTCCATTACGGCTC CCTGCGGGGCCGTAGCCGCCGACCTGTCAACCTCAAGAAGTGGAGCATCACTGACGGCTATGTCCCCATTCTCGGCAACAAGACACTGCC CTCTCGGTGCCACCAGTGTGTGATTGTCAGCAGCTCCAGCCACCTGCTGGGCACCAAGCTGGGCCCTGAGATCGAGCGGGCTGAGTGTAC AATCCGCATGAATGATGCACCCACCACTGGCTACTCAGCTGATGTGGGCAACAAGACCACCTACCGCGTCGTGGCCCATTCCAGTGTGTT CCGCGTGCTGAGGAGGCCCCAGGAGTTTGTCAACCGGACCCCTGAAACCGTGTTCATCTTCTGGGGGCCCCCGAGCAAGATGCAGAAGCC CCAGGGCAGCCTCGTGCGTGTGATCCAGCGAGCGGGCCTGGTGTTCCCCAACATGGAAGCATATGCCGTCTCTCCCGGCCGCATGCGGCA ATTTGACGACCTCTTCCGGGGTGAGACGGGCAAGGACAGGATTTGCATGCAGCCACTGTTAACCCGGACCCCAGTTTAAAAGAGTTTGAA GGAGCAACCCTACGCTATGCATCTTTGAAACTCAGAAATGCCCCACACCCTGATGATGATGATTCTTGTAGTATCAACAGTGACCCAGAA GCCAAGTGTTTTGCTGTGCGTTCTCTGGGATGGGTAGAGATGGCAGAAGAGGACCTCGCCCCCGGTAAAAGTAGTGTTGCGGTCAACAAC TGCATCAGGCAACTTTCCTACTGCAAAAATGACATCCGAGACACAGTCGGGATTTGGGGAGAGGGGAAAGACATGTACCTGATCCTGGAG AATGACATGCTCAGCCTGGTGGACCCCATGGACCGCAGCGTGCTGCACTCGCAGCCCATCGTCAGCATCCGCGTGTGGGGCGTGGGCCGC GACAATGGCCGGGATTTTGCTTATGTAGCAAGAGATAAAGATACAAGAATTTTGAAATGTCATGTATTTCGATGTGACACACCAGCAAAA GCCATTGCCACAAGTCTCCACGAGATCTGCTCCAAGATTATGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCAGCTCCTTACAGGAA AGGGCCAATGTGAACCTCGATGTCCCTTTGCAAGATTTTCCAACACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTGGGC ATGTTACCTGTAGACAAACCAGTCGGAATGGATATTTTGAACAGTGCCATAGAAAATCTTATGACCTCATCCAACAAGGAGGACTGGCTG TCAGTGAACATGAACGTGGCTGATGCCACTGTGACTGTCATCAGTGAAAAGAATGAAGAGGAAGTCTTAGTGGAATGTCGTGTGCGATTC CTGTCCTTCATGGGTGTTGGGAAGGACGTCCACACATTTGCCTTCATCATGGACACGGGGAACCAGCGCTTTGAGTGCCACGTTTTCTGG TGCGAGCCTAATGCTGGTAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGCCAGGCCGCCTTCT CAGAAAGTTCGACCACCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTCACAACCAATGTAAAACGAGGGGTCTTATCCCTCATTGAC ACTTTGAAACAGAAACGCCCTGTCACCGAAATGCCATAGCTGCACATGCAAAAGGACTCGGCTATTTACCTGAAGATTGACTAGCTACAC TAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATTTACCCTTAACCAAGCAGTGTTAGAC AAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGAATAATTTTTTTTGCTGTAAGTTACATCATGCGCAGTGGA AGGTCTTTTTCTTATTGTAAATATTGTGAACATTACTTAACTTCACACACACACAGAGAAGAGTGTGGCCCCACCCCTCCTAGTGAACTA ACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTTTAAGTCCTACAGCA CTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGTTTGTGTTTTAAT TTTTCATAAAATTGAACCTGTTGGTTGACAAAATTGGCTGTTGGCATCAGTATAGAAACCAACTGGCAGCTTTCCCTGACAAGCTCTTTG ACACATGGACACCATTTCATGTCTACAGCTGTTTGTGGGATGTTGGAAAAAAATGAAACTTCAAAATTGATGAAAAACTAAATTCGAGGA ATTAAAATCGAACAAAACATAGCCTTTCTTTTCCGATGGTTTTCAAACTGATTATTTTTAAAAGAGATTAATAAAATCATAATGCATTTT GGGTGGGACATATTTCAAACTTCTGCCTTATATTGTACGGTGCAGCTAGAGAATTATAGTTCACTATGGCCATTCTCTACATAAACATTA AGATGAAATACTCCTCATCAGCCTTTCATCCTTAGTTTGAGAATTAGCTGATATGCAATTTGAAGTTGAGGAAATATCATTGATATTTCT ATCATGCACGATTATTTTAGATTTCTACCACCGTGTGATTTTTGCTAGTCCATGTGCTAGAGGTAAACGTTCTGCTGGAATTCTGCATCC AGCTCTATCCCCCTCTGATGCTTTTTGCCCAGAAAGCTGTCTGTCCATCATGTATTGTCCATGGCAACAAATTACATTAGGTTGAACCTT TCCTTGATTTTATGTATTTAATATTAGAATTTGTTGGACTCAACTAGATATATTTTTTAATTTATATTTTTTCCATTTTACTTTGAAGAT TTGAAATGTTCATACCTGAGCAAAGTCTACACAGGAGTAATGGACTGTTTAACAAGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTAT GTAGGTGAGAAACTTAGCTGGAAAGACATACAAATTTAGACTCTCGTTGACATTGTCGTTTTAAAAGGAAGTTGCTAAGGCGATCAATCT >In-frame_ENST00000373141_ENST00000513140_TCGA-EJ-7785-11A_ST6GALNAC6_chr9_130652915_-_APBB2_chr4_40936716_length(amino acids)=388AA_start in transcript=852_stop in transcript=2018 MHAATVNPDPSLKEFEGATLRYASLKLRNAPHPDDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKSSVAVNNCIRQLSYCKNDIRD TVGIWGEGKDMYLILENDMLSLVDPMDRSVLHSQPIVSIRVWGVGRDNGRDFAYVARDKDTRILKCHVFRCDTPAKAIATSLHEICSKIM AERKNAKALACSSLQERANVNLDVPLQDFPTPKTELVQKFHVQYLGMLPVDKPVGMDILNSAIENLMTSSNKEDWLSVNMNVADATVTVI SEKNEEEVLVECRVRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAGNVSEAVQAACMLRYQKCLVARPPSQKVRPPPPPADSVT -------------------------------------------------------------- >In-frame_ENST00000373141_ENST00000508593_TCGA-EJ-7785-11A_ST6GALNAC6_chr9_130652915_-_APBB2_chr4_40936716_length(transcript)=2790nt_BP=849nt GGCTATTCCTGGTGGCCGTGTAGGAGTAAACAGCGGCTAGGTCAAAGGGCTCAGAGAATACAGGAACTGAGAGGCCCCTGGAGCAGGGGA CGGAGCTGAGGAGGGCCCCCTAAGCCCCAGTTTCTTCCCTCTGCACTCCTGCCCGCCCTGCCCCCGGCCTGTCTGCTGGAGGTGTGAACC CACATCCCTGCCCCCAGGGCCACCTGCAGGACGCCGACACCTACCCCTCAGCAGACGCCGGAGAGAAATGAGTAGCAACAAAGAGCAGCG GTCAGCAGTGTTCGTGATCCTCTTTGCCCTCATCACCATCCTCATCCTCTACAGCTCCAACAGTGCCAATGAGGTCTTCCATTACGGCTC CCTGCGGGGCCGTAGCCGCCGACCTGTCAACCTCAAGAAGTGGAGCATCACTGACGGCTATGTCCCCATTCTCGGCAACAAGACACTGCC CTCTCGGTGCCACCAGTGTGTGATTGTCAGCAGCTCCAGCCACCTGCTGGGCACCAAGCTGGGCCCTGAGATCGAGCGGGCTGAGTGTAC AATCCGCATGAATGATGCACCCACCACTGGCTACTCAGCTGATGTGGGCAACAAGACCACCTACCGCGTCGTGGCCCATTCCAGTGTGTT CCGCGTGCTGAGGAGGCCCCAGGAGTTTGTCAACCGGACCCCTGAAACCGTGTTCATCTTCTGGGGGCCCCCGAGCAAGATGCAGAAGCC CCAGGGCAGCCTCGTGCGTGTGATCCAGCGAGCGGGCCTGGTGTTCCCCAACATGGAAGCATATGCCGTCTCTCCCGGCCGCATGCGGCA ATTTGACGACCTCTTCCGGGGTGAGACGGGCAAGGACAGGATTTGCATGCAGCCACTGTTAACCCGGACCCCAGTTTAAAAGAGTTTGAA GGAGCAACCCTACGCTATGCATCTTTGAAACTCAGAAATGCCCCACACCCTGATGATGATGATTCTTGTAGTATCAACAGTGACCCAGAA GCCAAGTGTTTTGCTGTGCGTTCTCTGGGATGGGTAGAGATGGCAGAAGAGGACCTCGCCCCCGGTAAAAGTAGTGTTGCGGTCAACAAC TGCATCAGGCAACTTTCCTACTGCAAAAATGACATCCGAGACACAGTCGGGATTTGGGGAGAGGGGAAAGACATGTACCTGATCCTGGAG AATGACATGCTCAGCCTGGTGGACCCCATGGACCGCAGCGTGCTGCACTCGCAGCCCATCGTCAGCATCCGCGTGTGGGGCGTGGGCCGC GACAATGGCCGGGATTTTGCTTATGTAGCAAGAGATAAAGATACAAGAATTTTGAAATGTCATGTATTTCGATGTGACACACCAGCAAAA GCCATTGCCACAAGTCTCCACGAGATCTGCTCCAAGATTATGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCAGCTCCTTACAGGAA AGGGCCAATGTGAACCTCGATGTCCCTTTGCAAGTAGATTTTCCAACACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTG GGCATGTTACCTGTAGACAAACCAGTCGGAATGGATATTTTGAACAGTGCCATAGAAAATCTTATGACCTCATCCAACAAGGAGGACTGG CTGTCAGTGAACATGAACGTGGCTGATGCCACTGTGACTGTCATCAGTGAAAAGAATGAAGAGGAAGTCTTAGTGGAATGTCGTGTGCGA TTCCTGTCCTTCATGGGTGTTGGGAAGGACGTCCACACATTTGCCTTCATCATGGACACGGGGAACCAGCGCTTTGAGTGCCACGTTTTC TGGTGCGAGCCTAATGCTGGTAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGCCAGGCCGCCT TCTCAGAAAGTTCGACCACCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTCACAACCAATGTAAAACGAGGGGTCTTATCCCTCATT GACACTTTGAAACAGAAACGCCCTGTCACCGAAATGCCATAGCTGCACATGCAAAAGGACTCGGCTATTTACCTGAAGATTGACTAGCTA CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATTTACCCTTAACCAAGCAGTGTTA GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGAATAATTTTTTTTGCTGTAAGTTACATCATGCGCAGT GGAAGGTCTTTTTCTTATTGTAAATATTGTGAACATTACTTAACTTCACACACACACAGAGAAGAGTGTGGCCCCACCCCTCCTAGTGAA CTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTTTAAGTCCTACA GCACTTTGCCCTGTTTTCAACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGTTTGTGTTTT AATTTTTCATAAAATTGAACCTGTTGGTTGACAAAATTGGCTGTTGGCATCAGTATAGAAACCAACTGGCAGCTTTCCCTGACAAGCTCT TTGACACATGGACACCATTTCATGTCTACAGCTGTTTGTGGGATGTTGGAAAAAAATGAAACTTCAAAATTGATGAAAAACTAAATTCGA GGAATTAAAATCGAACAAAACATAGCCTTTCTTTTCCGATGGTTTTCAAACTGATTATTTTTAAAAGAGATTAATAAAATCATAATGCAT >In-frame_ENST00000373141_ENST00000508593_TCGA-EJ-7785-11A_ST6GALNAC6_chr9_130652915_-_APBB2_chr4_40936716_length(amino acids)=389AA_start in transcript=852_stop in transcript=2021 MHAATVNPDPSLKEFEGATLRYASLKLRNAPHPDDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKSSVAVNNCIRQLSYCKNDIRD TVGIWGEGKDMYLILENDMLSLVDPMDRSVLHSQPIVSIRVWGVGRDNGRDFAYVARDKDTRILKCHVFRCDTPAKAIATSLHEICSKIM AERKNAKALACSSLQERANVNLDVPLQVDFPTPKTELVQKFHVQYLGMLPVDKPVGMDILNSAIENLMTSSNKEDWLSVNMNVADATVTV ISEKNEEEVLVECRVRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAGNVSEAVQAACMLRYQKCLVARPPSQKVRPPPPPADSV -------------------------------------------------------------- >In-frame_ENST00000373141_ENST00000506352_TCGA-EJ-7785-11A_ST6GALNAC6_chr9_130652915_-_APBB2_chr4_40936716_length(transcript)=2497nt_BP=849nt GGCTATTCCTGGTGGCCGTGTAGGAGTAAACAGCGGCTAGGTCAAAGGGCTCAGAGAATACAGGAACTGAGAGGCCCCTGGAGCAGGGGA CGGAGCTGAGGAGGGCCCCCTAAGCCCCAGTTTCTTCCCTCTGCACTCCTGCCCGCCCTGCCCCCGGCCTGTCTGCTGGAGGTGTGAACC CACATCCCTGCCCCCAGGGCCACCTGCAGGACGCCGACACCTACCCCTCAGCAGACGCCGGAGAGAAATGAGTAGCAACAAAGAGCAGCG GTCAGCAGTGTTCGTGATCCTCTTTGCCCTCATCACCATCCTCATCCTCTACAGCTCCAACAGTGCCAATGAGGTCTTCCATTACGGCTC CCTGCGGGGCCGTAGCCGCCGACCTGTCAACCTCAAGAAGTGGAGCATCACTGACGGCTATGTCCCCATTCTCGGCAACAAGACACTGCC CTCTCGGTGCCACCAGTGTGTGATTGTCAGCAGCTCCAGCCACCTGCTGGGCACCAAGCTGGGCCCTGAGATCGAGCGGGCTGAGTGTAC AATCCGCATGAATGATGCACCCACCACTGGCTACTCAGCTGATGTGGGCAACAAGACCACCTACCGCGTCGTGGCCCATTCCAGTGTGTT CCGCGTGCTGAGGAGGCCCCAGGAGTTTGTCAACCGGACCCCTGAAACCGTGTTCATCTTCTGGGGGCCCCCGAGCAAGATGCAGAAGCC CCAGGGCAGCCTCGTGCGTGTGATCCAGCGAGCGGGCCTGGTGTTCCCCAACATGGAAGCATATGCCGTCTCTCCCGGCCGCATGCGGCA ATTTGACGACCTCTTCCGGGGTGAGACGGGCAAGGACAGGATTTGCATGCAGCCACTGTTAACCCGGACCCCAGTTTAAAAGAGTTTGAA GGAGCAACCCTACGCTATGCATCTTTGAAACTCAGAAATGCCCCACACCCTGATGATGATGATTCTTGTAGTATCAACAGTGACCCAGAA GCCAAGTGTTTTGCTGTGCGTTCTCTGGGATGGGTAGAGATGGCAGAAGAGGACCTCGCCCCCGGTAAAAGTAGTGTTGCGGTCAACAAC TGCATCAGGCAACTTTCCTACTGCAAAAATGACATCCGAGACACAGTCGGGATTTGGGGAGAGGGGAAAGACATGTACCTGATCCTGGAG AATGACATGCTCAGCCTGGTGGACCCCATGGACCGCAGCGTGCTGCACTCGCAGCCCATCGTCAGCATCCGCGTGTGGGGCGTGGGCCGC GACAATGGCCGGGATTTTGCTTATGTAGCAAGAGATAAAGATACAAGAATTTTGAAATGTCATGTATTTCGATGTGACACACCAGCAAAA GCCATTGCCACAAGTCTCCACGAGATCTGCTCCAAGATTATGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCAGCTCCTTACAGGAA AGGGCCAATGTGAACCTCGATGTCCCTTTGCAAGTAGATTTTCCAACACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTG GGCATGTTACCTGTAGACAAACCAGTCGGAATGGATATTTTGAACAGTGCCATAGAAAATCTTATGACCTCATCCAACAAGGAGGACTGG CTGTCAGTGAACATGAACGTGGCTGATGCCACTGTGACTGTCATCAGTGAAAAGAATGAAGAGGAAGTCTTAGTGGAATGTCGTGTGCGA TTCCTGTCCTTCATGGGTGTTGGGAAGGACGTCCACACATTTGCCTTCATCATGGACACGGGGAACCAGCGCTTTGAGTGCCACGTTTTC TGGTGCGAGCCTAATGCTGGTAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGCCAGGCCGCCT TCTCAGAAAGTTCGACCACCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTCACAACCAATGTAAAACGAGGGGTCTTATCCCTCATT GACACTTTGAAACAGAAACGCCCTGTCACCGAAATGCCATAGCTGCACATGCAAAAGGACTCGGCTATTTACCTGAAGATTGACTAGCTA CACTAAAGAAAATGAACTCCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATTTACCCTTAACCAAGCAGTGTTA GACAAGCATGTTCTCTCGTCTTGCCACCATCATGTGATATGAAAAGAAGCATGAATAATTTTTTTTGCTGTAAGTTACATCATGCGCAGT GGAAGGTCTTTTTCTTATTGTAAATATTGTGAACATTACTTAACTTCACACACACACAGAGAAGAGTGTGGCCCCACCCCTCCTAGTGAA CTAACGCTGCGTCCTTGGAATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTTTAAGTCCTACA >In-frame_ENST00000373141_ENST00000506352_TCGA-EJ-7785-11A_ST6GALNAC6_chr9_130652915_-_APBB2_chr4_40936716_length(amino acids)=389AA_start in transcript=852_stop in transcript=2021 MHAATVNPDPSLKEFEGATLRYASLKLRNAPHPDDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKSSVAVNNCIRQLSYCKNDIRD TVGIWGEGKDMYLILENDMLSLVDPMDRSVLHSQPIVSIRVWGVGRDNGRDFAYVARDKDTRILKCHVFRCDTPAKAIATSLHEICSKIM AERKNAKALACSSLQERANVNLDVPLQVDFPTPKTELVQKFHVQYLGMLPVDKPVGMDILNSAIENLMTSSNKEDWLSVNMNVADATVTV ISEKNEEEVLVECRVRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAGNVSEAVQAACMLRYQKCLVARPPSQKVRPPPPPADSV -------------------------------------------------------------- >In-frame_ENST00000373144_ENST00000295974_TCGA-EJ-7785-11A_ST6GALNAC6_chr9_130652915_-_APBB2_chr4_40936716_length(transcript)=8069nt_BP=831nt CTGGGCCGGGCCGTGACGGCGGCGCTAGGACCCGGCGGGCCGCGGGTGCGGCGAGGCCTGGGCGGCCTGAGGAGCGCGGACCCCGGCGCT CGGCTCCCGGCGCCATGTGAGGGGGCTCGGGGGCCGCGGGGGGCCGGGCGCTCCCCGCCGGAGGTGTGAACCCACATCCCTGCCCCCAGG GCCACCTGCAGGACGCCGACACCTACCCCTCAGCAGACGCCGGAGAGAAATGAGTAGCAACAAAGAGCAGCGGTCAGCAGTGTTCGTGAT CCTCTTTGCCCTCATCACCATCCTCATCCTCTACAGCTCCAACAGTGCCAATGAGGTCTTCCATTACGGCTCCCTGCGGGGCCGTAGCCG CCGACCTGTCAACCTCAAGAAGTGGAGCATCACTGACGGCTATGTCCCCATTCTCGGCAACAAGACACTGCCCTCTCGGTGCCACCAGTG TGTGATTGTCAGCAGCTCCAGCCACCTGCTGGGCACCAAGCTGGGCCCTGAGATCGAGCGGGCTGAGTGTACAATCCGCATGAATGATGC ACCCACCACTGGCTACTCAGCTGATGTGGGCAACAAGACCACCTACCGCGTCGTGGCCCATTCCAGTGTGTTCCGCGTGCTGAGGAGGCC CCAGGAGTTTGTCAACCGGACCCCTGAAACCGTGTTCATCTTCTGGGGGCCCCCGAGCAAGATGCAGAAGCCCCAGGGCAGCCTCGTGCG TGTGATCCAGCGAGCGGGCCTGGTGTTCCCCAACATGGAAGCATATGCCGTCTCTCCCGGCCGCATGCGGCAATTTGACGACCTCTTCCG GGGTGAGACGGGCAAGGACAGGATTTGCATGCAGCCACTGTTAACCCGGACCCCAGTTTAAAAGAGTTTGAAGGAGCAACCCTACGCTAT GCATCTTTGAAACTCAGAAATGCCCCACACCCTGATGATGATGATTCTTGTAGTATCAACAGTGACCCAGAAGCCAAGTGTTTTGCTGTG CGTTCTCTGGGATGGGTAGAGATGGCAGAAGAGGACCTCGCCCCCGGTAAAAGTAGTGTTGCGGTCAACAACTGCATCAGGCAACTTTCC TACTGCAAAAATGACATCCGAGACACAGTCGGGATTTGGGGAGAGGGGAAAGACATGTACCTGATCCTGGAGAATGACATGCTCAGCCTG GTGGACCCCATGGACCGCAGCGTGCTGCACTCGCAGCCCATCGTCAGCATCCGCGTGTGGGGCGTGGGCCGCGACAATGGCCGGGATTTT GCTTATGTAGCAAGAGATAAAGATACAAGAATTTTGAAATGTCATGTATTTCGATGTGACACACCAGCAAAAGCCATTGCCACAAGTCTC CACGAGATCTGCTCCAAGATTATGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCAGCTCCTTACAGGAAAGGGCCAATGTGAACCTC GATGTCCCTTTGCAAGTAGATTTTCCAACACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTGGGCATGTTACCTGTAGAC AAACCAGTCGGAATGGATATTTTGAACAGTGCCATAGAAAATCTTATGACCTCATCCAACAAGGAGGACTGGCTGTCAGTGAACATGAAC GTGGCTGATGCCACTGTGACTGTCATCAGTGAAAAGAATGAAGAGGAAGTCTTAGTGGAATGTCGTGTGCGATTCCTGTCCTTCATGGGT GTTGGGAAGGACGTCCACACATTTGCCTTCATCATGGACACGGGGAACCAGCGCTTTGAGTGCCACGTTTTCTGGTGCGAGCCTAATGCT GGTAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGCCAGGCCGCCTTCTCAGAAAGTTCGACCA CCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTCACAACCAATGTAAAACGAGGGGTCTTATCCCTCATTGACACTTTGAAACAGAAA CGCCCTGTCACCGAAATGCCATAGCTGCACATGCAAAAGGACTCGGCTATTTACCTGAAGATTGACTAGCTACACTAAAGAAAATGAACT CCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATTTACCCTTAACCAAGCAGTGTTAGACAAGCATGTTCTCTCG TCTTGCCACCATCATGTGATATGAAAAGAAGCATGAATAATTTTTTTTGCTGTAAGTTACATCATGCGCAGTGGAAGGTCTTTTTCTTAT TGTAAATATTGTGAACATTACTTAACTTCACACACACACAGAGAAGAGTGTGGCCCCACCCCTCCTAGTGAACTAACGCTGCGTCCTTGG AATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTC AACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGTTTGTGTTTTAATTTTTCATAAAATTGA ACCTGTTGGTTGACAAAATTGGCTGTTGGCATCAGTATAGAAACCAACTGGCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCAT TTCATGTCTACAGCTGTTTGTGGGATGTTGGAAAAAAATGAAACTTCAAAATTGATGAAAAACTAAATTCGAGGAATTAAAATCGAACAA AACATAGCCTTTCTTTTCCGATGGTTTTCAAACTGATTATTTTTAAAAGAGATTAATAAAATCATAATGCATTTTGGGTGGGACATATTT CAAACTTCTGCCTTATATTGTACGGTGCAGCTAGAGAATTATAGTTCACTATGGCCATTCTCTACATAAACATTAAGATGAAATACTCCT CATCAGCCTTTCATCCTTAGTTTGAGAATTAGCTGATATGCAATTTGAAGTTGAGGAAATATCATTGATATTTCTATCATGCACGATTAT TTTAGATTTCTACCACCGTGTGATTTTTGCTAGTCCATGTGCTAGAGGTAAACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCCCTC TGATGCTTTTTGCCCAGAAAGCTGTCTGTCCATCATGTATTGTCCATGGCAACAAATTACATTAGGTTGAACCTTTCCTTGATTTTATGT ATTTAATATTAGAATTTGTTGGACTCAACTAGATATATTTTTTAATTTATATTTTTTCCATTTTACTTTGAAGATTTGAAATGTTCATAC CTGAGCAAAGTCTACACAGGAGTAATGGACTGTTTAACAAGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTT AGCTGGAAAGACATACAAATTTAGACTCTCGTTGACATTGTCGTTTTAAAAGGAAGTTGCTAAGGCGATCAATCTCAATATTAGTCTTGT TTACTTCTTCTTAATGTCAAAATTAACATTTACAACATCCAATTATAAAAGTAATGCTTTATGTTTATACACTGCTATGTACTTGTCAAA ATGGTTTCCACATTCTTATCACATCTGAGCCTTACCAGGTAGAGAAGGTACTAAATACACTTTAGAAGTAAAAATATGAAGTACCGAGAG GCTAAACCCACTGGCCTAAGATCTCACCAAAGTTCATGAAAACCAGGACTAGGACCCACGGCTCCCAAAGCCCGTTCTTGCTGTGTTGTG CTGCCTCCATATCCGTCAGGAAGAGCCTTTCCAGAATGATTCTGGGCATATACTAAGAAGAGCAGGTATGGAAAGATCTATTGTCAGGGA ATCTTAGAATTCCCTACACGAGTGGGAGAAAGATGTCCAAATTCCTTACGCAGTGGTATTCATGATGGTGCCCTATCTAAGTCCAGGACT GTTTTCCTACAGCGTGCCTCAAAAGTGTTGTAGAGGGCAGGATTCTACATTCACAGCCTGTTCCATCTACGAGATTTTCCAGATGCTACT TGTGGTAGACATTCCTAACTCATGGTACTTAGCCACCAGAGATCATGATGGAATGAGTGGGTGGCTTTTCTACCTGCCATTCCCTCAGAA TTCATGAGGGGTGGGGGACAGGGGGACCGGAATTGTCTTAGCACCCCAATGTTATGACAAAACTATGCTACTTTAGAAACGCAGTCTGTT TTTCACCAATTGACATACTACTGATCTGAAGTAACCAGTGCCATCATAAGAAATTACTGCATTAAGAAAATCCTTGCTGTGCCCTTTGAA AAGCTGTTCAGAAATCATTTACAGTGATCTTTCATCTCGGTCGCTGTAGTGAAACATTTTAGTGTGATAAATTTCAAAATTCTAAACAAA TTACCCACTTTTATATTGGAAATCTCTACCAGAACTCCCTCTTCATTTTTTAAGGCATACATTTGCTTGTTTTCAAGATCAAGAATTCTG AGCTAGCTTTAAGTAGCAAACTGATTTATATGTGCAATTATAGGATGCATTAAGATGAATGATAGCCTTTACATATTGAAAACTTTGCAG ACGTTTTGTTTTGAAAATGGCATTGTATAGTAAATGCAAATTAATTTTGTAAAATTATGTTAAAGAGTATGTTCAGACACTTTCTGCCAT GGCCAAAAAGTATGTATGAAAGTATGTGTGTATTTGTTTGTAAAAGGATGCCAATGTTTTACCTGATATCTTAGTGACACTTCAGTTATC TATGCATTCTTTAGATCTGTGATTCGGTAAACAGGCAGCCATGTTCACGATGCCTTCTATGTCTTACCATATTTTTAATTAACCTGTTAA ATACAGCTTAAAATATTTTTATTTTATTTATTCTATTTTTACTGAAATATACTGCATTATTGTGTTAATGTATTATCTTTCCTGGATATT ATCTCCCAGTGTATCCAGATCTAAGTAATCTCAGTGAACTATACATTGCCTAAAAAGTGGTTTTGTAATGATTTGTAGTCACATTTCTAT TGGGATATGTAGAAGAAAAGGCAAAATGCTTAAAGTTCCTTTTATTTTTTAAAAGCAGCTAGATAGACACAGACTTGCCACCTCATACAT CTGCTCCTTGGCAACATCAAGGGGAACGACTAGCCAACATGCCTATGGCTAAAAACTTTCCTTTGCAGACTAAAGCACTGCTTGGTGCTT CGTTTTTCTACCCTTCACAACATGTGTGATTTCATCTAAGAGATATATACATGTACACATGCCCTTTGTTTCCACCTGGATACAAGATCA CTCATAGCTAATTAGGACCATTGTTTTTTGTTCATCTGTCTTGTTGCATGAAGGGACATTAGACCCATTTCCATTAAAATAAGTTCTTGG TGATAAACTGTGGCACTGCTACTTCTTTTTAAATCCACTTTATGATTTCAAGATGGACACTTGTAAGATGACTCGACACAAGGCCATTGC CTGGAAGCCCCAGAGCTTTCCTCTGTTTGTATGGCCCGTTCATGTCCCAGGCATTGCAACACAAACTCCTCAAGATTTCACCACAACATG ACAAGCATTTTCCTAACTGATATTAGCACAATTTAACTAATAAGCCCCTTCGCTCTCTAGTTGGCCAGGCTTAACCTAATACACATCTAA CGTGTGTGCCACACGGCCAGTAGAAAGTTTAACTTCAGCTTCAGGGCAAAGATACCCACTCACACCGTGTCAACGCAAGCAGTAGTTCCT GGCCTCCAGAGCAGCTTACTTCCCCTGAAAGAACGCTTTGTTTTCCTTTATGCCCTTTTCCTGTTGACCACTTTTACACATTTAAATGTA ATTTGTTGTGAGAATAAATTTAGCTGCATAAAACGTTCGGCTCATTTATCTGACATCTTAGTCACATATACAAGGAATAGAAATAGAAAC TCGGTGTCTCTAGTTATTTTTAAATTATTCTTACCTCAGACTTCTTAGAAATCACTTTAGTAATGGAGCATTTTGCTTTGATTAGTTACT ACATATTTCTGCCTGGTAAGAACTAGGAAGTAACTTCAAATTTTGAGTAATCACCCTGTACTTATTTGGTGATCAGGAAGGCCAGCTGGC CTTCCGGACATAGAAGCCTATTTAGTCACCAACTCGAGTCTTTTGTAAGCGGTCTTGCTAGGATTGTGATATTTTAGCACGAAGAAGTTT ATCACTTCCTTTAAGAACCTGACATCAAAGAATAAAGAATAGAGGTGTACACACACTAAATCCAAAATGAAAGGTAACTAGAGAAATCAG TTGAATCTGGTTTAGCTTAACTGTTAGGCGCAGGAAGGCAGATAAACAGAATTTAAAGTATGTCCCCGCTTTTTGTTCATCTTGCACTTC CACAGTGGTTTCTCTCTAGTCAGTAACAAAATTTCATTATGGTTTCAGGCATTATATGGTGGTAAATAATTTCAGATTAAAAATGTGTTT GCTATTGGAGTATCTGAATACTAGTAATTTCATTATTTAGAATTTTGCAGCACTTTTATCTCAAGAAGAAGTCCAAGAATGTAAAATGCC AAATGAAACATGTCAGTGGAATCAATATTCTCCTTCATTAGAATTCCCTCATATTGCTTTTTTTTTTTTTCTTCAGACAGAGGAGTCTTA CTCTGGAGTGCAGTGGTGTAATTTCAGCTCACCACAACCTCCACCTCCCAAGTTCAAGCAATTCTCGCCTCAGCCTCCTGAGTAGCTGGG ATTACAGGCATGCACCGCCACGCCTGGCCAATTTGTATATTTTTAGTAGAGACAGGGTTTCGCCACGTTGGCCAGGCTGGTCTCGAACTC CTGACCTCAGGTGATCCGCCCGCCCCAACCTCCCAAAGTATGTGAGCCACCACGTCCGGCCTCATATTGCTTTTATCCAAAATTCTTTTC CCTTTTCACTCTACCAAAGTATTTAAATAATCCTGTCCTTCATAGAAGATTCTCAAAGAAGAAAACTGCAGTGTAATTAATGAATGGTTT AATTCAGAATCTTCATATACTTCTAAAGAGAAAAATAATTTAGTGCCAAATGCATGTTAGGAGATAATCAATGTAAGTGGCAACAAATTG TGACTTCACATGCTACTGTAGAGATCAGAAAATTATCCTAAACTATTCCATAACAATGAGACAACATCACAGAAAATACACTTGAAAATA AAAATCTCAAGACCAGCTACTTCTGGACAATGGAATACTTTTCAGTCTGGTATGGTGGAGGGCCCGAAAAGGATAAGGGATTCTTATGAT ACACAATGGGATTCTTTACTGAACAATATGTTAAATTAAGCTGCACCGCCTTCCTTGAGGCATGGACTACCCTAACCAACCAGATAGAAA TCTGGGTGGGATAAGAGGATGAGCCACACGCTATAATTTTAGGGCAAGGAGATAGTGTTTGATTTTCAAAATCAGCAAAATAAGCTGAGC ACTTTATATCTTTCTGTACAAGAGTGATAACATGAAGAATTCTTCTTCAGGGATTTAAAATACAATAAGCCTGGTTCAACTATAAAAAGT CTTGTTTCCTTTCTTCATTGACACTTTTTTTTTTTTTTTTTTTTTTTTGAGGCAAGGTCTCACTCTGCTTCCCAGGCTGGAGTGCAGTGG GGCAATATTGGCTCACTGCAACCTGCACCTCCTGGACTCAAGAGATCCTCGTACCTCAGCCTCCTAAGTAGCTGGGACTACAGGCGTGTC CCACCACACCCAGCTAATTTTTGTATTTTTTGTAGAGATGGGGTTTTGGGGTTTCGCCATGTTGTCCAGGCTCGTCTGGAACTCCGGTGC TCAAGTGGCGTGCCCACCTCAGCCTCCCAAACTGCTGAGATTACAGATGTGAGCCACTGCACCCAGCCCACTGACACGTTTTACTGATAA ATGTAAATCTAAGCTAAAATAAAAATAATGTATTACCGCTATAATACAATTCACCATTCTCTTTTCTCACTTCAAGTAAGAAAGTAAAAA TAGAATATCAGAGCTGAAGTAGACCTAAGTATTCATCTTGAAGAAGATAATATTCTAAAAATCATGCCACCTGAATTGAGCATTTAGGAA >In-frame_ENST00000373144_ENST00000295974_TCGA-EJ-7785-11A_ST6GALNAC6_chr9_130652915_-_APBB2_chr4_40936716_length(amino acids)=389AA_start in transcript=834_stop in transcript=2003 MHAATVNPDPSLKEFEGATLRYASLKLRNAPHPDDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKSSVAVNNCIRQLSYCKNDIRD TVGIWGEGKDMYLILENDMLSLVDPMDRSVLHSQPIVSIRVWGVGRDNGRDFAYVARDKDTRILKCHVFRCDTPAKAIATSLHEICSKIM AERKNAKALACSSLQERANVNLDVPLQVDFPTPKTELVQKFHVQYLGMLPVDKPVGMDILNSAIENLMTSSNKEDWLSVNMNVADATVTV ISEKNEEEVLVECRVRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAGNVSEAVQAACMLRYQKCLVARPPSQKVRPPPPPADSV -------------------------------------------------------------- >In-frame_ENST00000373144_ENST00000513140_TCGA-EJ-7785-11A_ST6GALNAC6_chr9_130652915_-_APBB2_chr4_40936716_length(transcript)=3486nt_BP=831nt CTGGGCCGGGCCGTGACGGCGGCGCTAGGACCCGGCGGGCCGCGGGTGCGGCGAGGCCTGGGCGGCCTGAGGAGCGCGGACCCCGGCGCT CGGCTCCCGGCGCCATGTGAGGGGGCTCGGGGGCCGCGGGGGGCCGGGCGCTCCCCGCCGGAGGTGTGAACCCACATCCCTGCCCCCAGG GCCACCTGCAGGACGCCGACACCTACCCCTCAGCAGACGCCGGAGAGAAATGAGTAGCAACAAAGAGCAGCGGTCAGCAGTGTTCGTGAT CCTCTTTGCCCTCATCACCATCCTCATCCTCTACAGCTCCAACAGTGCCAATGAGGTCTTCCATTACGGCTCCCTGCGGGGCCGTAGCCG CCGACCTGTCAACCTCAAGAAGTGGAGCATCACTGACGGCTATGTCCCCATTCTCGGCAACAAGACACTGCCCTCTCGGTGCCACCAGTG TGTGATTGTCAGCAGCTCCAGCCACCTGCTGGGCACCAAGCTGGGCCCTGAGATCGAGCGGGCTGAGTGTACAATCCGCATGAATGATGC ACCCACCACTGGCTACTCAGCTGATGTGGGCAACAAGACCACCTACCGCGTCGTGGCCCATTCCAGTGTGTTCCGCGTGCTGAGGAGGCC CCAGGAGTTTGTCAACCGGACCCCTGAAACCGTGTTCATCTTCTGGGGGCCCCCGAGCAAGATGCAGAAGCCCCAGGGCAGCCTCGTGCG TGTGATCCAGCGAGCGGGCCTGGTGTTCCCCAACATGGAAGCATATGCCGTCTCTCCCGGCCGCATGCGGCAATTTGACGACCTCTTCCG GGGTGAGACGGGCAAGGACAGGATTTGCATGCAGCCACTGTTAACCCGGACCCCAGTTTAAAAGAGTTTGAAGGAGCAACCCTACGCTAT GCATCTTTGAAACTCAGAAATGCCCCACACCCTGATGATGATGATTCTTGTAGTATCAACAGTGACCCAGAAGCCAAGTGTTTTGCTGTG CGTTCTCTGGGATGGGTAGAGATGGCAGAAGAGGACCTCGCCCCCGGTAAAAGTAGTGTTGCGGTCAACAACTGCATCAGGCAACTTTCC TACTGCAAAAATGACATCCGAGACACAGTCGGGATTTGGGGAGAGGGGAAAGACATGTACCTGATCCTGGAGAATGACATGCTCAGCCTG GTGGACCCCATGGACCGCAGCGTGCTGCACTCGCAGCCCATCGTCAGCATCCGCGTGTGGGGCGTGGGCCGCGACAATGGCCGGGATTTT GCTTATGTAGCAAGAGATAAAGATACAAGAATTTTGAAATGTCATGTATTTCGATGTGACACACCAGCAAAAGCCATTGCCACAAGTCTC CACGAGATCTGCTCCAAGATTATGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCAGCTCCTTACAGGAAAGGGCCAATGTGAACCTC GATGTCCCTTTGCAAGATTTTCCAACACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTGGGCATGTTACCTGTAGACAAA CCAGTCGGAATGGATATTTTGAACAGTGCCATAGAAAATCTTATGACCTCATCCAACAAGGAGGACTGGCTGTCAGTGAACATGAACGTG GCTGATGCCACTGTGACTGTCATCAGTGAAAAGAATGAAGAGGAAGTCTTAGTGGAATGTCGTGTGCGATTCCTGTCCTTCATGGGTGTT GGGAAGGACGTCCACACATTTGCCTTCATCATGGACACGGGGAACCAGCGCTTTGAGTGCCACGTTTTCTGGTGCGAGCCTAATGCTGGT AACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGCCAGGCCGCCTTCTCAGAAAGTTCGACCACCT CCACCGCCAGCAGATTCAGTAACCAGAAGAGTCACAACCAATGTAAAACGAGGGGTCTTATCCCTCATTGACACTTTGAAACAGAAACGC CCTGTCACCGAAATGCCATAGCTGCACATGCAAAAGGACTCGGCTATTTACCTGAAGATTGACTAGCTACACTAAAGAAAATGAACTCCG CCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATTTACCCTTAACCAAGCAGTGTTAGACAAGCATGTTCTCTCGTCT TGCCACCATCATGTGATATGAAAAGAAGCATGAATAATTTTTTTTGCTGTAAGTTACATCATGCGCAGTGGAAGGTCTTTTTCTTATTGT AAATATTGTGAACATTACTTAACTTCACACACACACAGAGAAGAGTGTGGCCCCACCCCTCCTAGTGAACTAACGCTGCGTCCTTGGAAT GAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTCAAC ATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGTTTGTGTTTTAATTTTTCATAAAATTGAACC TGTTGGTTGACAAAATTGGCTGTTGGCATCAGTATAGAAACCAACTGGCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCATTTC ATGTCTACAGCTGTTTGTGGGATGTTGGAAAAAAATGAAACTTCAAAATTGATGAAAAACTAAATTCGAGGAATTAAAATCGAACAAAAC ATAGCCTTTCTTTTCCGATGGTTTTCAAACTGATTATTTTTAAAAGAGATTAATAAAATCATAATGCATTTTGGGTGGGACATATTTCAA ACTTCTGCCTTATATTGTACGGTGCAGCTAGAGAATTATAGTTCACTATGGCCATTCTCTACATAAACATTAAGATGAAATACTCCTCAT CAGCCTTTCATCCTTAGTTTGAGAATTAGCTGATATGCAATTTGAAGTTGAGGAAATATCATTGATATTTCTATCATGCACGATTATTTT AGATTTCTACCACCGTGTGATTTTTGCTAGTCCATGTGCTAGAGGTAAACGTTCTGCTGGAATTCTGCATCCAGCTCTATCCCCCTCTGA TGCTTTTTGCCCAGAAAGCTGTCTGTCCATCATGTATTGTCCATGGCAACAAATTACATTAGGTTGAACCTTTCCTTGATTTTATGTATT TAATATTAGAATTTGTTGGACTCAACTAGATATATTTTTTAATTTATATTTTTTCCATTTTACTTTGAAGATTTGAAATGTTCATACCTG AGCAAAGTCTACACAGGAGTAATGGACTGTTTAACAAGTTTCCCAAAACAGCATTTTCCTGCTCCTTCGTATGTAGGTGAGAAACTTAGC TGGAAAGACATACAAATTTAGACTCTCGTTGACATTGTCGTTTTAAAAGGAAGTTGCTAAGGCGATCAATCTCAATATTAGTCTTGTTTA >In-frame_ENST00000373144_ENST00000513140_TCGA-EJ-7785-11A_ST6GALNAC6_chr9_130652915_-_APBB2_chr4_40936716_length(amino acids)=388AA_start in transcript=834_stop in transcript=2000 MHAATVNPDPSLKEFEGATLRYASLKLRNAPHPDDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKSSVAVNNCIRQLSYCKNDIRD TVGIWGEGKDMYLILENDMLSLVDPMDRSVLHSQPIVSIRVWGVGRDNGRDFAYVARDKDTRILKCHVFRCDTPAKAIATSLHEICSKIM AERKNAKALACSSLQERANVNLDVPLQDFPTPKTELVQKFHVQYLGMLPVDKPVGMDILNSAIENLMTSSNKEDWLSVNMNVADATVTVI SEKNEEEVLVECRVRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAGNVSEAVQAACMLRYQKCLVARPPSQKVRPPPPPADSVT -------------------------------------------------------------- >In-frame_ENST00000373144_ENST00000508593_TCGA-EJ-7785-11A_ST6GALNAC6_chr9_130652915_-_APBB2_chr4_40936716_length(transcript)=2772nt_BP=831nt CTGGGCCGGGCCGTGACGGCGGCGCTAGGACCCGGCGGGCCGCGGGTGCGGCGAGGCCTGGGCGGCCTGAGGAGCGCGGACCCCGGCGCT CGGCTCCCGGCGCCATGTGAGGGGGCTCGGGGGCCGCGGGGGGCCGGGCGCTCCCCGCCGGAGGTGTGAACCCACATCCCTGCCCCCAGG GCCACCTGCAGGACGCCGACACCTACCCCTCAGCAGACGCCGGAGAGAAATGAGTAGCAACAAAGAGCAGCGGTCAGCAGTGTTCGTGAT CCTCTTTGCCCTCATCACCATCCTCATCCTCTACAGCTCCAACAGTGCCAATGAGGTCTTCCATTACGGCTCCCTGCGGGGCCGTAGCCG CCGACCTGTCAACCTCAAGAAGTGGAGCATCACTGACGGCTATGTCCCCATTCTCGGCAACAAGACACTGCCCTCTCGGTGCCACCAGTG TGTGATTGTCAGCAGCTCCAGCCACCTGCTGGGCACCAAGCTGGGCCCTGAGATCGAGCGGGCTGAGTGTACAATCCGCATGAATGATGC ACCCACCACTGGCTACTCAGCTGATGTGGGCAACAAGACCACCTACCGCGTCGTGGCCCATTCCAGTGTGTTCCGCGTGCTGAGGAGGCC CCAGGAGTTTGTCAACCGGACCCCTGAAACCGTGTTCATCTTCTGGGGGCCCCCGAGCAAGATGCAGAAGCCCCAGGGCAGCCTCGTGCG TGTGATCCAGCGAGCGGGCCTGGTGTTCCCCAACATGGAAGCATATGCCGTCTCTCCCGGCCGCATGCGGCAATTTGACGACCTCTTCCG GGGTGAGACGGGCAAGGACAGGATTTGCATGCAGCCACTGTTAACCCGGACCCCAGTTTAAAAGAGTTTGAAGGAGCAACCCTACGCTAT GCATCTTTGAAACTCAGAAATGCCCCACACCCTGATGATGATGATTCTTGTAGTATCAACAGTGACCCAGAAGCCAAGTGTTTTGCTGTG CGTTCTCTGGGATGGGTAGAGATGGCAGAAGAGGACCTCGCCCCCGGTAAAAGTAGTGTTGCGGTCAACAACTGCATCAGGCAACTTTCC TACTGCAAAAATGACATCCGAGACACAGTCGGGATTTGGGGAGAGGGGAAAGACATGTACCTGATCCTGGAGAATGACATGCTCAGCCTG GTGGACCCCATGGACCGCAGCGTGCTGCACTCGCAGCCCATCGTCAGCATCCGCGTGTGGGGCGTGGGCCGCGACAATGGCCGGGATTTT GCTTATGTAGCAAGAGATAAAGATACAAGAATTTTGAAATGTCATGTATTTCGATGTGACACACCAGCAAAAGCCATTGCCACAAGTCTC CACGAGATCTGCTCCAAGATTATGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCAGCTCCTTACAGGAAAGGGCCAATGTGAACCTC GATGTCCCTTTGCAAGTAGATTTTCCAACACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTGGGCATGTTACCTGTAGAC AAACCAGTCGGAATGGATATTTTGAACAGTGCCATAGAAAATCTTATGACCTCATCCAACAAGGAGGACTGGCTGTCAGTGAACATGAAC GTGGCTGATGCCACTGTGACTGTCATCAGTGAAAAGAATGAAGAGGAAGTCTTAGTGGAATGTCGTGTGCGATTCCTGTCCTTCATGGGT GTTGGGAAGGACGTCCACACATTTGCCTTCATCATGGACACGGGGAACCAGCGCTTTGAGTGCCACGTTTTCTGGTGCGAGCCTAATGCT GGTAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGCCAGGCCGCCTTCTCAGAAAGTTCGACCA CCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTCACAACCAATGTAAAACGAGGGGTCTTATCCCTCATTGACACTTTGAAACAGAAA CGCCCTGTCACCGAAATGCCATAGCTGCACATGCAAAAGGACTCGGCTATTTACCTGAAGATTGACTAGCTACACTAAAGAAAATGAACT CCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATTTACCCTTAACCAAGCAGTGTTAGACAAGCATGTTCTCTCG TCTTGCCACCATCATGTGATATGAAAAGAAGCATGAATAATTTTTTTTGCTGTAAGTTACATCATGCGCAGTGGAAGGTCTTTTTCTTAT TGTAAATATTGTGAACATTACTTAACTTCACACACACACAGAGAAGAGTGTGGCCCCACCCCTCCTAGTGAACTAACGCTGCGTCCTTGG AATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTC AACATTGGAGTAGGCACTGCATAGCAGATACCATTGAATTGCTGTAAAAATAGGATGGCGAGTTTGTGTTTTAATTTTTCATAAAATTGA ACCTGTTGGTTGACAAAATTGGCTGTTGGCATCAGTATAGAAACCAACTGGCAGCTTTCCCTGACAAGCTCTTTGACACATGGACACCAT TTCATGTCTACAGCTGTTTGTGGGATGTTGGAAAAAAATGAAACTTCAAAATTGATGAAAAACTAAATTCGAGGAATTAAAATCGAACAA >In-frame_ENST00000373144_ENST00000508593_TCGA-EJ-7785-11A_ST6GALNAC6_chr9_130652915_-_APBB2_chr4_40936716_length(amino acids)=389AA_start in transcript=834_stop in transcript=2003 MHAATVNPDPSLKEFEGATLRYASLKLRNAPHPDDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKSSVAVNNCIRQLSYCKNDIRD TVGIWGEGKDMYLILENDMLSLVDPMDRSVLHSQPIVSIRVWGVGRDNGRDFAYVARDKDTRILKCHVFRCDTPAKAIATSLHEICSKIM AERKNAKALACSSLQERANVNLDVPLQVDFPTPKTELVQKFHVQYLGMLPVDKPVGMDILNSAIENLMTSSNKEDWLSVNMNVADATVTV ISEKNEEEVLVECRVRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAGNVSEAVQAACMLRYQKCLVARPPSQKVRPPPPPADSV -------------------------------------------------------------- >In-frame_ENST00000373144_ENST00000506352_TCGA-EJ-7785-11A_ST6GALNAC6_chr9_130652915_-_APBB2_chr4_40936716_length(transcript)=2479nt_BP=831nt CTGGGCCGGGCCGTGACGGCGGCGCTAGGACCCGGCGGGCCGCGGGTGCGGCGAGGCCTGGGCGGCCTGAGGAGCGCGGACCCCGGCGCT CGGCTCCCGGCGCCATGTGAGGGGGCTCGGGGGCCGCGGGGGGCCGGGCGCTCCCCGCCGGAGGTGTGAACCCACATCCCTGCCCCCAGG GCCACCTGCAGGACGCCGACACCTACCCCTCAGCAGACGCCGGAGAGAAATGAGTAGCAACAAAGAGCAGCGGTCAGCAGTGTTCGTGAT CCTCTTTGCCCTCATCACCATCCTCATCCTCTACAGCTCCAACAGTGCCAATGAGGTCTTCCATTACGGCTCCCTGCGGGGCCGTAGCCG CCGACCTGTCAACCTCAAGAAGTGGAGCATCACTGACGGCTATGTCCCCATTCTCGGCAACAAGACACTGCCCTCTCGGTGCCACCAGTG TGTGATTGTCAGCAGCTCCAGCCACCTGCTGGGCACCAAGCTGGGCCCTGAGATCGAGCGGGCTGAGTGTACAATCCGCATGAATGATGC ACCCACCACTGGCTACTCAGCTGATGTGGGCAACAAGACCACCTACCGCGTCGTGGCCCATTCCAGTGTGTTCCGCGTGCTGAGGAGGCC CCAGGAGTTTGTCAACCGGACCCCTGAAACCGTGTTCATCTTCTGGGGGCCCCCGAGCAAGATGCAGAAGCCCCAGGGCAGCCTCGTGCG TGTGATCCAGCGAGCGGGCCTGGTGTTCCCCAACATGGAAGCATATGCCGTCTCTCCCGGCCGCATGCGGCAATTTGACGACCTCTTCCG GGGTGAGACGGGCAAGGACAGGATTTGCATGCAGCCACTGTTAACCCGGACCCCAGTTTAAAAGAGTTTGAAGGAGCAACCCTACGCTAT GCATCTTTGAAACTCAGAAATGCCCCACACCCTGATGATGATGATTCTTGTAGTATCAACAGTGACCCAGAAGCCAAGTGTTTTGCTGTG CGTTCTCTGGGATGGGTAGAGATGGCAGAAGAGGACCTCGCCCCCGGTAAAAGTAGTGTTGCGGTCAACAACTGCATCAGGCAACTTTCC TACTGCAAAAATGACATCCGAGACACAGTCGGGATTTGGGGAGAGGGGAAAGACATGTACCTGATCCTGGAGAATGACATGCTCAGCCTG GTGGACCCCATGGACCGCAGCGTGCTGCACTCGCAGCCCATCGTCAGCATCCGCGTGTGGGGCGTGGGCCGCGACAATGGCCGGGATTTT GCTTATGTAGCAAGAGATAAAGATACAAGAATTTTGAAATGTCATGTATTTCGATGTGACACACCAGCAAAAGCCATTGCCACAAGTCTC CACGAGATCTGCTCCAAGATTATGGCTGAACGGAAGAATGCCAAAGCGCTGGCCTGCAGCTCCTTACAGGAAAGGGCCAATGTGAACCTC GATGTCCCTTTGCAAGTAGATTTTCCAACACCAAAGACTGAGCTGGTCCAGAAGTTCCACGTGCAGTACTTGGGCATGTTACCTGTAGAC AAACCAGTCGGAATGGATATTTTGAACAGTGCCATAGAAAATCTTATGACCTCATCCAACAAGGAGGACTGGCTGTCAGTGAACATGAAC GTGGCTGATGCCACTGTGACTGTCATCAGTGAAAAGAATGAAGAGGAAGTCTTAGTGGAATGTCGTGTGCGATTCCTGTCCTTCATGGGT GTTGGGAAGGACGTCCACACATTTGCCTTCATCATGGACACGGGGAACCAGCGCTTTGAGTGCCACGTTTTCTGGTGCGAGCCTAATGCT GGTAACGTGTCTGAGGCGGTGCAGGCCGCCTGCATGTTACGATATCAGAAGTGCTTGGTAGCCAGGCCGCCTTCTCAGAAAGTTCGACCA CCTCCACCGCCAGCAGATTCAGTAACCAGAAGAGTCACAACCAATGTAAAACGAGGGGTCTTATCCCTCATTGACACTTTGAAACAGAAA CGCCCTGTCACCGAAATGCCATAGCTGCACATGCAAAAGGACTCGGCTATTTACCTGAAGATTGACTAGCTACACTAAAGAAAATGAACT CCGCCATCCGACCTTCCATCCAGTTGCTGATGCTTTGTCTTCAGAGAATTTACCCTTAACCAAGCAGTGTTAGACAAGCATGTTCTCTCG TCTTGCCACCATCATGTGATATGAAAAGAAGCATGAATAATTTTTTTTGCTGTAAGTTACATCATGCGCAGTGGAAGGTCTTTTTCTTAT TGTAAATATTGTGAACATTACTTAACTTCACACACACACAGAGAAGAGTGTGGCCCCACCCCTCCTAGTGAACTAACGCTGCGTCCTTGG AATGAATGATGCGTGAGTTAGTTTCACTGTCTTCTTGGCTGGACCTGTCACAAGCAACCTTTAAGTCCTACAGCACTTTGCCCTGTTTTC >In-frame_ENST00000373144_ENST00000506352_TCGA-EJ-7785-11A_ST6GALNAC6_chr9_130652915_-_APBB2_chr4_40936716_length(amino acids)=389AA_start in transcript=834_stop in transcript=2003 MHAATVNPDPSLKEFEGATLRYASLKLRNAPHPDDDDSCSINSDPEAKCFAVRSLGWVEMAEEDLAPGKSSVAVNNCIRQLSYCKNDIRD TVGIWGEGKDMYLILENDMLSLVDPMDRSVLHSQPIVSIRVWGVGRDNGRDFAYVARDKDTRILKCHVFRCDTPAKAIATSLHEICSKIM AERKNAKALACSSLQERANVNLDVPLQVDFPTPKTELVQKFHVQYLGMLPVDKPVGMDILNSAIENLMTSSNKEDWLSVNMNVADATVTV ISEKNEEEVLVECRVRFLSFMGVGKDVHTFAFIMDTGNQRFECHVFWCEPNAGNVSEAVQAACMLRYQKCLVARPPSQKVRPPPPPADSV -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for ST6GALNAC6-APBB2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ST6GALNAC6-APBB2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for ST6GALNAC6-APBB2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | APBB2 | C0043094 | Weight Gain | 1 | CTD_human |