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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:SULF2-SRGAP2 (FusionGDB2 ID:87439)

Fusion Gene Summary for SULF2-SRGAP2

check button Fusion gene summary
Fusion gene informationFusion gene name: SULF2-SRGAP2
Fusion gene ID: 87439
HgeneTgene
Gene symbol

SULF2

SRGAP2

Gene ID

55959

23380

Gene namesulfatase 2SLIT-ROBO Rho GTPase activating protein 2
SynonymsHSULF-2ARHGAP34|FNBP2|SRGAP2A|SRGAP3
Cytomap

20q13.12

1q32.1

Type of geneprotein-codingprotein-coding
Descriptionextracellular sulfatase Sulf-2SLIT-ROBO Rho GTPase-activating protein 2SLIT-ROBO GAP2formin-binding protein 2rho GTPase-activating protein 34
Modification date2020031320200313
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000359930, ENST00000484875, 
ENST00000361612, ENST00000467815, 
ENST00000478766, 
ENST00000414007, 
ENST00000419187, ENST00000471256, 
Fusion gene scores* DoF score12 X 13 X 7=109215 X 15 X 7=1575
# samples 1416
** MAII scorelog2(14/1092*10)=-2.96347412397489
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(16/1575*10)=-3.29920801838728
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: SULF2 [Title/Abstract] AND SRGAP2 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointSULF2(46331263)-SRGAP2(206589249), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneSULF2

GO:0030177

positive regulation of Wnt signaling pathway

19520866

HgeneSULF2

GO:0030201

heparan sulfate proteoglycan metabolic process

18687675

TgeneSRGAP2

GO:0043547

positive regulation of GTPase activity

21148482

TgeneSRGAP2

GO:0046847

filopodium assembly

22559944

TgeneSRGAP2

GO:0051014

actin filament severing

21148482

TgeneSRGAP2

GO:0060996

dendritic spine development

22559944

TgeneSRGAP2

GO:2001223

negative regulation of neuron migration

22559944


check buttonFusion gene breakpoints across SULF2 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across SRGAP2 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4KIRCTCGA-BP-4763-01ASULF2chr20

46331263

-SRGAP2chr1

206589249

+


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Fusion Gene ORF analysis for SULF2-SRGAP2

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000359930ENST00000414007SULF2chr20

46331263

-SRGAP2chr1

206589249

+
5CDS-5UTRENST00000359930ENST00000419187SULF2chr20

46331263

-SRGAP2chr1

206589249

+
5CDS-intronENST00000359930ENST00000471256SULF2chr20

46331263

-SRGAP2chr1

206589249

+
In-frameENST00000484875ENST00000414007SULF2chr20

46331263

-SRGAP2chr1

206589249

+
5CDS-5UTRENST00000484875ENST00000419187SULF2chr20

46331263

-SRGAP2chr1

206589249

+
5CDS-intronENST00000484875ENST00000471256SULF2chr20

46331263

-SRGAP2chr1

206589249

+
In-frameENST00000361612ENST00000414007SULF2chr20

46331263

-SRGAP2chr1

206589249

+
5CDS-5UTRENST00000361612ENST00000419187SULF2chr20

46331263

-SRGAP2chr1

206589249

+
5CDS-intronENST00000361612ENST00000471256SULF2chr20

46331263

-SRGAP2chr1

206589249

+
In-frameENST00000467815ENST00000414007SULF2chr20

46331263

-SRGAP2chr1

206589249

+
5CDS-5UTRENST00000467815ENST00000419187SULF2chr20

46331263

-SRGAP2chr1

206589249

+
5CDS-intronENST00000467815ENST00000471256SULF2chr20

46331263

-SRGAP2chr1

206589249

+
intron-3CDSENST00000478766ENST00000414007SULF2chr20

46331263

-SRGAP2chr1

206589249

+
intron-5UTRENST00000478766ENST00000419187SULF2chr20

46331263

-SRGAP2chr1

206589249

+
intron-intronENST00000478766ENST00000471256SULF2chr20

46331263

-SRGAP2chr1

206589249

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000359930SULF2chr2046331263-ENST00000414007SRGAP2chr1206589249+629714198523278808
ENST00000484875SULF2chr2046331263-ENST00000414007SRGAP2chr1206589249+611412366693095808
ENST00000361612SULF2chr2046331263-ENST00000414007SRGAP2chr1206589249+611412366693095808
ENST00000467815SULF2chr2046331263-ENST00000414007SRGAP2chr1206589249+605211746073033808

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000359930ENST00000414007SULF2chr2046331263-SRGAP2chr1206589249+0.0005121220.9994879
ENST00000484875ENST00000414007SULF2chr2046331263-SRGAP2chr1206589249+0.0005345490.9994654
ENST00000361612ENST00000414007SULF2chr2046331263-SRGAP2chr1206589249+0.0005345490.9994654
ENST00000467815ENST00000414007SULF2chr2046331263-SRGAP2chr1206589249+0.0005319380.999468

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Fusion Genomic Features for SULF2-SRGAP2


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
SULF2chr2046331262-SRGAP2chr1206589248+0.0005829520.99941707
SULF2chr2046331262-SRGAP2chr1206589248+0.0005829520.99941707

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for SULF2-SRGAP2


check button Go to

FGviewer for the breakpoints of chr20:46331263-chr1:206589249

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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Fusion Gene Sequence for SULF2-SRGAP2


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000359930_ENST00000414007_TCGA-BP-4763-01A_SULF2_chr20_46331263_-_SRGAP2_chr1_206589249_length(transcript)=6297nt_BP=1419nt
CACTTGAGCCGAAGTTAATTTCTCGGGGAGTTCTCGGGCGCGCACAGGCAGCTCGGTTTGCCCTGCGATTGAGCTGCGGGTCGCGGCCGG
CGCCGGCCTCTCCAATGGCAAATGTGTGTGGCTGGAGGCGAGCGCGAGGCTTTCGGCAAAGGCAGTCGAGTGTTTGCAGACCGGGGCGAG
TCCTGTGAAAGCAGATAAAAGAAAACATTTATTAACGTGTCATTACGAGGGGAGCGCCCGGCCGGGGCTGTCGCACTCCCCGCGGAACAT
TTGGCTCCCTCCAGCTCCGAGAGAGGAGAAGAAGAAAGCGGAAAAGAGGCAGATTCACGTCGTTTCCAGCCAAGTGGACCTGATCGATGG
CCCTCCTGAATTTATCACGATATTTGATTTATTAGCGATGCCCCCTGGTTTGTGTGTTACGCACACACACGTGCACACAAGGCTCTGGCT
CGCTTCCCTCCCTCGTTTCCAGCTCCTGGGCGAATCCCACATCTGTTTCAACTCTCCGCCGAGGGCGAGCAGGAGCGAGAGTGTGTCGAG
TGAGTGTGCGTCTGTGTGTCCCGGCGAGGGTGCGCGCTCGGCGCCGGGAGCGCGGCCAGCCGAGTCCGGAGGCATCGGGAGGTCGAGAGC
CGCCGGGACCCCAGCTCTGCGTTCACTGCCCCGTCCGGAGCTGGACTTCGGGGCCGGGGCCGGGGCCGTGCGCCGGGGACAGGCAGGGCC
GGGTCGCGGGCCGCGCGTCCCCCAGGCCGGAGATCTGCGAGTGAAGAGGGACGAGGGAAAAGAAACAAAGCCACAGACGCAACTTGAGAC
TCCCGCATCCCAAAAGAAGCACCAGATCAGCAAAAAAAGAAGATGGGCCCCCCGAGCCTCGTGCTGTGCTTGCTGTCCGCAACTGTGTTC
TCCCTGCTGGGTGGAAGCTCGGCCTTCCTGTCGCACCACCGCCTGAAAGGCAGGTTTCAGAGGGACCGCAGGAACATCCGCCCCAACATC
ATCCTGGTGCTGACGGACGACCAGGATGTGGAGCTGGGTTCCATGCAGGTGATGAACAAGACCCGGCGCATCATGGAGCAGGGCGGGGCG
CACTTCATCAACGCCTTCGTGACCACACCCATGTGCTGCCCCTCACGCTCCTCCATCCTCACTGGCAAGTACGTCCACAACCACAACACC
TACACCAACAATGAGAACTGCTCCTCGCCCTCCTGGCAGGCACAGCACGAGAGCCGCACCTTTGCCGTGTACCTCAATAGCACTGGCTAC
CGGACAGCTTTCTTCGGGAAGTATCTTAATGAATACAACGGCTCCTACGTGCCACCCGGCTGGAAGGAGTGGGTCGGACTCCTTAAAAAC
TCCCGCTTTTATAACTACACGCTGTGTCGGAACGGGGTGAAAGAGAAGCACGGCTCCGACTACTCCAAGAAAATGAAAGAGTACCTGGAG
GGCAGGAACCTCATCACCAAGTTACAAGCCAAGCATGACCTTCTGCAGAAAACCCTGGGAGAAAGTCAGCGGACAGATTGCAGTCTAGCC
AGGCGCAGCTCAACTGTGAGGAAACAGGACTCCAGCCAGGCAATTCCTCTGGTGGTGGAAAGCTGTATCCGGTTTATCAGCAGACACGGA
CTACAGCATGAAGGAATTTTCCGGGTGTCAGGATCCCAGGTGGAAGTGAATGACATCAAAAATGCCTTTGAGAGAGGAGAGGACCCCCTG
GCTGGGGACCAGAACGACCATGACATGGATTCCATAGCTGGTGTCCTGAAGCTTTACTTCCGGGGGCTGGAACACCCTCTCTTCCCCAAG
GACATCTTTCATGACCTGATGGCCTGCGTCACAATGGACAACCTGCAGGAGAGAGCTCTGCACATCCGGAAAGTCCTCCTAGTCCTGCCC
AAAACCACTCTGATTATCATGAGATACCTCTTTGCCTTCCTCAATCATTTATCACAGTTCAGTGAAGAGAACATGATGGACCCCTACAAC
CTCGCCATCTGCTTCGGGCCCTCGCTAATGTCAGTGCCAGAGGGCCACGACCAGGTGTCCTGCCAAGCCCACGTGAATGAGCTGATCAAA
ACCATCATCATCCAGCATGAGAACATCTTCCCAAGCCCCAGGGAGCTGGAGGGCCCTGTCTACAGCAGAGGAGGAAGCATGGAGGATTAC
TGTGATAGCCCTCATGGAGAGACTACCTCGGTTGAAGACTCAACCCAGGATGTGACCGCAGAGCACCACACGAGCGATGACGAATGTGAG
CCCATCGAGGCCATTGCCAAGTTTGACTACGTGGGCCGGACAGCCCGAGAGCTGTCCTTTAAGAAGGGAGCATCCCTGCTGCTTTACCAG
CGGGCTTCCGACGACTGGTGGGAAGGCCGGCACAATGGCATCGACGGACTCATCCCCCATCAGTACATCGTGGTCCAAGACACCGAGGAC
GGTGTCGTGGAGAGGTCCAGCCCCAAGTCTGAGATTGAGGTCATTTCTGAGCCACCTGAAGAAAAGGTGACAGCCAGAGCGGGGGCCAGC
TGTCCCAGTGGGGGTCATGTAGCCGATATTTATCTTGCAAACATCAACAAGCAAAGGAAGCGTCCAGAATCTGGGAGCATCCGGAAAACT
TTTCGGAGTGACAGCCATGGGCTGAGCAGTTCCCTGACTGACTCCTCCTCCCCAGGGGTGGGGGCTAGCTGCCGCCCATCCTCCCAGCCC
ATCATGAGCCAGAGCCTCCCCAAAGAAGGGCCAGATAAGTGTTCCATCAGTGGGCACGGGAGCCTCAACTCCATCAGCCGCCACTCATCC
CTGAAGAATCGGCTGGATAGTCCACAGATCCGGAAGACTGCCACAGCGGGAAGGTCAAAAAGCTTCAATAACCATCGGCCCATGGACCCT
GAGGTCATTGCTCAGGATATTGAGGCAACAATGAACTCGGCCCTGAATGAGCTACGGGAACTAGAACGGCAGAGCAGTGTCAAACACACC
CCTGACGTGGTTCTGGACACCTTGGAGCCCCTCAAAACCTCCCCAGTGGTGGCCCCCACGTCAGAGCCCTCCAGCCCTCTGCACACCCAG
CTCCTCAAGGACCCCGAGCCCGCCTTCCAGCGCAGCGCCAGTACTGCTGGGGACATCGCCTGCGCCTTCCGGCCTGTCAAGTCTGTCAAG
ATGGCTGCCCCGGTCAAACCACCAGCCACACGGCCCAAGCCCACTGTCTTCCCCAAAACAAATGCCACTAGCCCTGGTGTCAACTCATCA
ACTTCCCCACAGTCTACTGACAAGTCTTGTACTGTCTGAGGGATAATAATTTAATTGTTCTAGACAAGGGGACTATAGGGACTGACTGTT
ATTAAAATCTTCCTATTTAACTAGCTTGGGGACTTCAGTTGAAAATTAGGTTCTAAGTTGTTCTTGCAGGAATTAGCCTCCCCGTCTCCC
AAAACCTTGAGAATGAAGCCCTTGGTATCGCCTCTCCCTTCCCACTGCCCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTC
CGTACCGTTCTTAGGTTAGCCAGAGACAGGTTTTCATTATCAGGTCACTGTGAAATCTGGTAAGGCAGTCCTGAGGACATGGGCTCAAGT
CTCAGTCCCCTCAGACCACGGTGATGCCTTGACCAGATGGTTGGCTACTGCCATCCAGCTTTCAGTGGCATCTTGTTTTGGGAACTGATT
ATAGAGAATCATATATAGTCCAGTCTTCATTTTACATACACACACATATTTTACACACACACACATTTTACACACACACACACACACACA
CACATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCTTTGTAAGTTATTGTGGCAGTTCACACAGTAG
CCACCAGGGGTCTCTGTTTCCATTACAAACTTTGTTCTGTCTGGGCCAGAGAACCTAGCCTTTGAAATCTCTCCATCATATGAAACATAA
CGGGATGGGACAATCCCGTAACCTGTTTGGGGTTGGGGGCTTTCTCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCT
CTTGCCTCTCCTCCATCCCCTAGAAGTACACCCCCGTCTTATTAAGGAGCTTTTAAAGTTTTTCTGAATGTATAGACATTTCTCGGGTTC
CTACCTTTGTCTCTGATGGACCATTTTCCATTTAAGACATTTTCCTGTATAAGACAGTTTTATAGCTGGTTCCTTTTAGGGTAAAGAGTC
TTAAGAGAGTTTTATTGTGTCTATGGCAGGTTTGGGAAAGGTAAGAAATGGGTCCTTTTTCCTCCTAATGTTTTTGGCACTTAAAACATA
AAATTCATTATCCTATTAAAAAATTAAATTCAGCTTTGCTAATCCAGAAATTGTTCCCAAATGAAAACTTGTTTTAAGTCCACCCCTTAG
TTTCCTTATTTTACAAGGTCTCTCTTCAGGGACCAACAGGGGCTTAGAGAGCCTTAGTTAGATTAAAGGGAGACCCTACCTCTTAAAACC
AGTTTTCATTTATGCAAACAAGGACAATTAAGGGAACCCTGACCCCACAGGCTCTCAAGTCTTCCCAAGGCCAGAATCGAAAGAAAATTA
AAATTTGAATGCTGAATATTCTGGCTCTACTCTGGCCTTTTTTCTGGTTCCCTTCCAAAATGCACAAATCATACCCTTGTCTGCTCCAAT
TCAGTCTCCAAACCTGGTGCCTGTGCTCCTGGCCCCCCTAGCATCATGCTATCCCAGGAGTATCAGGACCAGACACATCCACAGCCAGGC
TCATGGGTCTCAGACAGCAACTTGAGTTAAAGCTGAAACTCATCCTTCTTCTCTGTGTTTTCTGGTTTAAAAGCTGCACTTATATTTTAG
CCTTATTATTTTCTGTAGTTCCGGAGAGATGGTGGGTTGCCATTCTGGTAGGAAAATCTGAGTTTTCTTATCTTTGACCTAGAAGAGATT
CTTTTTGGACCAACCTGCGAAATTGGTAGTTAGGTCTATGGAAAGTGGTAGGATTTTTTTTTTTTAATCCTGTGCAAAGGAAAAGAGGTG
CTTTGTGGGAAATCACTAATGAGAAGGCTAACCTGCAGCACCAGAGAAACCTTTCCAAGTGCTAGGCAGGAGAACTGAAGAACTCTTTCA
GTGAAGTGAGTCAGCCTAGAAGAGGCAACCCACAGTCTTGATTTTTGTTGCTGTTTCCTGACCTGTTCTTGCCTGTCACCTGGGCCTACA
CAGGTCCCGAGCCAACGGGGCTTTCATACCCAAGGATCTGTTTCCTTGCTGAAAATGAAACCCTATCTTTCACTTTACATTCCTTTCAAT
CCAACTGATCAAAACTGGTACCCACACTTGCCCTTTCTCCCTCTCTCCAGCACACTCCCCTCTAAGAAAGTAAAAGCAAAGCTTTCTTAA
TGGCAACACTTTGGGCCTGTTCTGTTGCTCCTGCCTTATTTCTCTTTCAACCCTGTACATGACTCGTGTTCACCATCCCCTTGATCAGTG
TCCATCCGCGCTAATTTGCATCATGAACTGAACAGTGTGTGAGTGGTCACCTACTAAACCCAGCTCTGGGGGCAGAGCTGTCTTCCCCAT
CTCTGGTGCTCCTAACACCTGTGAGATGGTCCTGTCGAGAGGACTAGGAACCGATAGGAGGAGAGTCCTTCTCGGCAGAGCTCACTGCAA
ACAACTGGAATTGAGGTTGCACACTGTGATTTTTACACCGAAAAGCCAAAAGGAGCTGGCCATCCAGGGCCTAGGGAGACCAGCCTTCCT
CAGCTATGCTTGCCGAAACCAGCATGATGCTTCAAAGAGCCCTGCTCCACCCCTCATGGCATGGATCCTTTTCCTGGTGTGGACTCTGAA
GGGTCAGTCTTCGGGGAAGAGAGGTGGGGTGGGGCTACTAGCATCCCAATTTAGAAAACAGAGGAGTTTGTAGCCAGCAGCCTGTAAACT
GGAAACACTGGTCTCAGCCAACCTCCTCAGGGCGCCCTGGCTTCTCCCCAAGGAGATGAGGAGCGGTGATGCCAGCACCGGGATGCGCAG
AGCACTGGAAGGGCTGGTGCAGATCTACTTCCCATGCAGAAGAGAAGTCACATCTTCCAGGGAATCGCAATGTTGTGGCGTCTGACTTGT
ATGTCACATTTGTGTAAAATGGTATATTCTTTAAAATAGTGTTGATAACTGGAATATTGTATGTATGCTTGGAGATGCTTTGTGTGAACC

>In-frame_ENST00000359930_ENST00000414007_TCGA-BP-4763-01A_SULF2_chr20_46331263_-_SRGAP2_chr1_206589249_length(amino acids)=808AA_start in transcript=852_stop in transcript=3278
MGPPSLVLCLLSATVFSLLGGSSAFLSHHRLKGRFQRDRRNIRPNIILVLTDDQDVELGSMQVMNKTRRIMEQGGAHFINAFVTTPMCCP
SRSSILTGKYVHNHNTYTNNENCSSPSWQAQHESRTFAVYLNSTGYRTAFFGKYLNEYNGSYVPPGWKEWVGLLKNSRFYNYTLCRNGVK
EKHGSDYSKKMKEYLEGRNLITKLQAKHDLLQKTLGESQRTDCSLARRSSTVRKQDSSQAIPLVVESCIRFISRHGLQHEGIFRVSGSQV
EVNDIKNAFERGEDPLAGDQNDHDMDSIAGVLKLYFRGLEHPLFPKDIFHDLMACVTMDNLQERALHIRKVLLVLPKTTLIIMRYLFAFL
NHLSQFSEENMMDPYNLAICFGPSLMSVPEGHDQVSCQAHVNELIKTIIIQHENIFPSPRELEGPVYSRGGSMEDYCDSPHGETTSVEDS
TQDVTAEHHTSDDECEPIEAIAKFDYVGRTARELSFKKGASLLLYQRASDDWWEGRHNGIDGLIPHQYIVVQDTEDGVVERSSPKSEIEV
ISEPPEEKVTARAGASCPSGGHVADIYLANINKQRKRPESGSIRKTFRSDSHGLSSSLTDSSSPGVGASCRPSSQPIMSQSLPKEGPDKC
SISGHGSLNSISRHSSLKNRLDSPQIRKTATAGRSKSFNNHRPMDPEVIAQDIEATMNSALNELRELERQSSVKHTPDVVLDTLEPLKTS

--------------------------------------------------------------
>In-frame_ENST00000484875_ENST00000414007_TCGA-BP-4763-01A_SULF2_chr20_46331263_-_SRGAP2_chr1_206589249_length(transcript)=6114nt_BP=1236nt
GGGCCATTTCTGGACAACAGCTGCTATTTTCACTTGAGCCGAAGTTAATTTCTCGGGGAGTTCTCGGGCGCGCACAGGCAGCTCGGTTTG
CCCTGCGATTGAGCTGCGGGTCGCGGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGTGGCTGGAGGCGAGCGCGAGGCTTTCGGCAAA
GGCAGTCGAGTGTTTGCAGACCGGGGCGAGTCCTGTGAAAGCAGATAAAAGAAAACATTTATTAACGTGTCATTACGAGGGGAGCGCCCG
GCCGGGGCTGTCGCACTCCCCGCGGAACATTTGGCTCCCTCCAGCTCCGAGAGAGGAGAAGAAGAAAGCGGAAAAGAGGCAGATTCACGT
CGTTTCCAGCCAAGTGGACCTGATCGATGGCCCTCCTGAATTTATCACGATATTTGATTTATTAGCGATGCCCCCTGGTTTGTGTGTTAC
GCACACACACGTGCACACAAGGCTCTGGCTCGCTTCCCTCCCTCGTTTCCAGCTCCTGGGCGAATCCCACATCTGTTTCAACTCTCCGCC
GAGGGCGAGCAGGAGCGAGAGTGTGTCGAATCTGCGAGTGAAGAGGGACGAGGGAAAAGAAACAAAGCCACAGACGCAACTTGAGACTCC
CGCATCCCAAAAGAAGCACCAGATCAGCAAAAAAAGAAGATGGGCCCCCCGAGCCTCGTGCTGTGCTTGCTGTCCGCAACTGTGTTCTCC
CTGCTGGGTGGAAGCTCGGCCTTCCTGTCGCACCACCGCCTGAAAGGCAGGTTTCAGAGGGACCGCAGGAACATCCGCCCCAACATCATC
CTGGTGCTGACGGACGACCAGGATGTGGAGCTGGGTTCCATGCAGGTGATGAACAAGACCCGGCGCATCATGGAGCAGGGCGGGGCGCAC
TTCATCAACGCCTTCGTGACCACACCCATGTGCTGCCCCTCACGCTCCTCCATCCTCACTGGCAAGTACGTCCACAACCACAACACCTAC
ACCAACAATGAGAACTGCTCCTCGCCCTCCTGGCAGGCACAGCACGAGAGCCGCACCTTTGCCGTGTACCTCAATAGCACTGGCTACCGG
ACAGCTTTCTTCGGGAAGTATCTTAATGAATACAACGGCTCCTACGTGCCACCCGGCTGGAAGGAGTGGGTCGGACTCCTTAAAAACTCC
CGCTTTTATAACTACACGCTGTGTCGGAACGGGGTGAAAGAGAAGCACGGCTCCGACTACTCCAAGAAAATGAAAGAGTACCTGGAGGGC
AGGAACCTCATCACCAAGTTACAAGCCAAGCATGACCTTCTGCAGAAAACCCTGGGAGAAAGTCAGCGGACAGATTGCAGTCTAGCCAGG
CGCAGCTCAACTGTGAGGAAACAGGACTCCAGCCAGGCAATTCCTCTGGTGGTGGAAAGCTGTATCCGGTTTATCAGCAGACACGGACTA
CAGCATGAAGGAATTTTCCGGGTGTCAGGATCCCAGGTGGAAGTGAATGACATCAAAAATGCCTTTGAGAGAGGAGAGGACCCCCTGGCT
GGGGACCAGAACGACCATGACATGGATTCCATAGCTGGTGTCCTGAAGCTTTACTTCCGGGGGCTGGAACACCCTCTCTTCCCCAAGGAC
ATCTTTCATGACCTGATGGCCTGCGTCACAATGGACAACCTGCAGGAGAGAGCTCTGCACATCCGGAAAGTCCTCCTAGTCCTGCCCAAA
ACCACTCTGATTATCATGAGATACCTCTTTGCCTTCCTCAATCATTTATCACAGTTCAGTGAAGAGAACATGATGGACCCCTACAACCTC
GCCATCTGCTTCGGGCCCTCGCTAATGTCAGTGCCAGAGGGCCACGACCAGGTGTCCTGCCAAGCCCACGTGAATGAGCTGATCAAAACC
ATCATCATCCAGCATGAGAACATCTTCCCAAGCCCCAGGGAGCTGGAGGGCCCTGTCTACAGCAGAGGAGGAAGCATGGAGGATTACTGT
GATAGCCCTCATGGAGAGACTACCTCGGTTGAAGACTCAACCCAGGATGTGACCGCAGAGCACCACACGAGCGATGACGAATGTGAGCCC
ATCGAGGCCATTGCCAAGTTTGACTACGTGGGCCGGACAGCCCGAGAGCTGTCCTTTAAGAAGGGAGCATCCCTGCTGCTTTACCAGCGG
GCTTCCGACGACTGGTGGGAAGGCCGGCACAATGGCATCGACGGACTCATCCCCCATCAGTACATCGTGGTCCAAGACACCGAGGACGGT
GTCGTGGAGAGGTCCAGCCCCAAGTCTGAGATTGAGGTCATTTCTGAGCCACCTGAAGAAAAGGTGACAGCCAGAGCGGGGGCCAGCTGT
CCCAGTGGGGGTCATGTAGCCGATATTTATCTTGCAAACATCAACAAGCAAAGGAAGCGTCCAGAATCTGGGAGCATCCGGAAAACTTTT
CGGAGTGACAGCCATGGGCTGAGCAGTTCCCTGACTGACTCCTCCTCCCCAGGGGTGGGGGCTAGCTGCCGCCCATCCTCCCAGCCCATC
ATGAGCCAGAGCCTCCCCAAAGAAGGGCCAGATAAGTGTTCCATCAGTGGGCACGGGAGCCTCAACTCCATCAGCCGCCACTCATCCCTG
AAGAATCGGCTGGATAGTCCACAGATCCGGAAGACTGCCACAGCGGGAAGGTCAAAAAGCTTCAATAACCATCGGCCCATGGACCCTGAG
GTCATTGCTCAGGATATTGAGGCAACAATGAACTCGGCCCTGAATGAGCTACGGGAACTAGAACGGCAGAGCAGTGTCAAACACACCCCT
GACGTGGTTCTGGACACCTTGGAGCCCCTCAAAACCTCCCCAGTGGTGGCCCCCACGTCAGAGCCCTCCAGCCCTCTGCACACCCAGCTC
CTCAAGGACCCCGAGCCCGCCTTCCAGCGCAGCGCCAGTACTGCTGGGGACATCGCCTGCGCCTTCCGGCCTGTCAAGTCTGTCAAGATG
GCTGCCCCGGTCAAACCACCAGCCACACGGCCCAAGCCCACTGTCTTCCCCAAAACAAATGCCACTAGCCCTGGTGTCAACTCATCAACT
TCCCCACAGTCTACTGACAAGTCTTGTACTGTCTGAGGGATAATAATTTAATTGTTCTAGACAAGGGGACTATAGGGACTGACTGTTATT
AAAATCTTCCTATTTAACTAGCTTGGGGACTTCAGTTGAAAATTAGGTTCTAAGTTGTTCTTGCAGGAATTAGCCTCCCCGTCTCCCAAA
ACCTTGAGAATGAAGCCCTTGGTATCGCCTCTCCCTTCCCACTGCCCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGT
ACCGTTCTTAGGTTAGCCAGAGACAGGTTTTCATTATCAGGTCACTGTGAAATCTGGTAAGGCAGTCCTGAGGACATGGGCTCAAGTCTC
AGTCCCCTCAGACCACGGTGATGCCTTGACCAGATGGTTGGCTACTGCCATCCAGCTTTCAGTGGCATCTTGTTTTGGGAACTGATTATA
GAGAATCATATATAGTCCAGTCTTCATTTTACATACACACACATATTTTACACACACACACATTTTACACACACACACACACACACACAC
ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCTTTGTAAGTTATTGTGGCAGTTCACACAGTAGCCA
CCAGGGGTCTCTGTTTCCATTACAAACTTTGTTCTGTCTGGGCCAGAGAACCTAGCCTTTGAAATCTCTCCATCATATGAAACATAACGG
GATGGGACAATCCCGTAACCTGTTTGGGGTTGGGGGCTTTCTCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTT
GCCTCTCCTCCATCCCCTAGAAGTACACCCCCGTCTTATTAAGGAGCTTTTAAAGTTTTTCTGAATGTATAGACATTTCTCGGGTTCCTA
CCTTTGTCTCTGATGGACCATTTTCCATTTAAGACATTTTCCTGTATAAGACAGTTTTATAGCTGGTTCCTTTTAGGGTAAAGAGTCTTA
AGAGAGTTTTATTGTGTCTATGGCAGGTTTGGGAAAGGTAAGAAATGGGTCCTTTTTCCTCCTAATGTTTTTGGCACTTAAAACATAAAA
TTCATTATCCTATTAAAAAATTAAATTCAGCTTTGCTAATCCAGAAATTGTTCCCAAATGAAAACTTGTTTTAAGTCCACCCCTTAGTTT
CCTTATTTTACAAGGTCTCTCTTCAGGGACCAACAGGGGCTTAGAGAGCCTTAGTTAGATTAAAGGGAGACCCTACCTCTTAAAACCAGT
TTTCATTTATGCAAACAAGGACAATTAAGGGAACCCTGACCCCACAGGCTCTCAAGTCTTCCCAAGGCCAGAATCGAAAGAAAATTAAAA
TTTGAATGCTGAATATTCTGGCTCTACTCTGGCCTTTTTTCTGGTTCCCTTCCAAAATGCACAAATCATACCCTTGTCTGCTCCAATTCA
GTCTCCAAACCTGGTGCCTGTGCTCCTGGCCCCCCTAGCATCATGCTATCCCAGGAGTATCAGGACCAGACACATCCACAGCCAGGCTCA
TGGGTCTCAGACAGCAACTTGAGTTAAAGCTGAAACTCATCCTTCTTCTCTGTGTTTTCTGGTTTAAAAGCTGCACTTATATTTTAGCCT
TATTATTTTCTGTAGTTCCGGAGAGATGGTGGGTTGCCATTCTGGTAGGAAAATCTGAGTTTTCTTATCTTTGACCTAGAAGAGATTCTT
TTTGGACCAACCTGCGAAATTGGTAGTTAGGTCTATGGAAAGTGGTAGGATTTTTTTTTTTTAATCCTGTGCAAAGGAAAAGAGGTGCTT
TGTGGGAAATCACTAATGAGAAGGCTAACCTGCAGCACCAGAGAAACCTTTCCAAGTGCTAGGCAGGAGAACTGAAGAACTCTTTCAGTG
AAGTGAGTCAGCCTAGAAGAGGCAACCCACAGTCTTGATTTTTGTTGCTGTTTCCTGACCTGTTCTTGCCTGTCACCTGGGCCTACACAG
GTCCCGAGCCAACGGGGCTTTCATACCCAAGGATCTGTTTCCTTGCTGAAAATGAAACCCTATCTTTCACTTTACATTCCTTTCAATCCA
ACTGATCAAAACTGGTACCCACACTTGCCCTTTCTCCCTCTCTCCAGCACACTCCCCTCTAAGAAAGTAAAAGCAAAGCTTTCTTAATGG
CAACACTTTGGGCCTGTTCTGTTGCTCCTGCCTTATTTCTCTTTCAACCCTGTACATGACTCGTGTTCACCATCCCCTTGATCAGTGTCC
ATCCGCGCTAATTTGCATCATGAACTGAACAGTGTGTGAGTGGTCACCTACTAAACCCAGCTCTGGGGGCAGAGCTGTCTTCCCCATCTC
TGGTGCTCCTAACACCTGTGAGATGGTCCTGTCGAGAGGACTAGGAACCGATAGGAGGAGAGTCCTTCTCGGCAGAGCTCACTGCAAACA
ACTGGAATTGAGGTTGCACACTGTGATTTTTACACCGAAAAGCCAAAAGGAGCTGGCCATCCAGGGCCTAGGGAGACCAGCCTTCCTCAG
CTATGCTTGCCGAAACCAGCATGATGCTTCAAAGAGCCCTGCTCCACCCCTCATGGCATGGATCCTTTTCCTGGTGTGGACTCTGAAGGG
TCAGTCTTCGGGGAAGAGAGGTGGGGTGGGGCTACTAGCATCCCAATTTAGAAAACAGAGGAGTTTGTAGCCAGCAGCCTGTAAACTGGA
AACACTGGTCTCAGCCAACCTCCTCAGGGCGCCCTGGCTTCTCCCCAAGGAGATGAGGAGCGGTGATGCCAGCACCGGGATGCGCAGAGC
ACTGGAAGGGCTGGTGCAGATCTACTTCCCATGCAGAAGAGAAGTCACATCTTCCAGGGAATCGCAATGTTGTGGCGTCTGACTTGTATG
TCACATTTGTGTAAAATGGTATATTCTTTAAAATAGTGTTGATAACTGGAATATTGTATGTATGCTTGGAGATGCTTTGTGTGAACCTAA

>In-frame_ENST00000484875_ENST00000414007_TCGA-BP-4763-01A_SULF2_chr20_46331263_-_SRGAP2_chr1_206589249_length(amino acids)=808AA_start in transcript=669_stop in transcript=3095
MGPPSLVLCLLSATVFSLLGGSSAFLSHHRLKGRFQRDRRNIRPNIILVLTDDQDVELGSMQVMNKTRRIMEQGGAHFINAFVTTPMCCP
SRSSILTGKYVHNHNTYTNNENCSSPSWQAQHESRTFAVYLNSTGYRTAFFGKYLNEYNGSYVPPGWKEWVGLLKNSRFYNYTLCRNGVK
EKHGSDYSKKMKEYLEGRNLITKLQAKHDLLQKTLGESQRTDCSLARRSSTVRKQDSSQAIPLVVESCIRFISRHGLQHEGIFRVSGSQV
EVNDIKNAFERGEDPLAGDQNDHDMDSIAGVLKLYFRGLEHPLFPKDIFHDLMACVTMDNLQERALHIRKVLLVLPKTTLIIMRYLFAFL
NHLSQFSEENMMDPYNLAICFGPSLMSVPEGHDQVSCQAHVNELIKTIIIQHENIFPSPRELEGPVYSRGGSMEDYCDSPHGETTSVEDS
TQDVTAEHHTSDDECEPIEAIAKFDYVGRTARELSFKKGASLLLYQRASDDWWEGRHNGIDGLIPHQYIVVQDTEDGVVERSSPKSEIEV
ISEPPEEKVTARAGASCPSGGHVADIYLANINKQRKRPESGSIRKTFRSDSHGLSSSLTDSSSPGVGASCRPSSQPIMSQSLPKEGPDKC
SISGHGSLNSISRHSSLKNRLDSPQIRKTATAGRSKSFNNHRPMDPEVIAQDIEATMNSALNELRELERQSSVKHTPDVVLDTLEPLKTS

--------------------------------------------------------------
>In-frame_ENST00000361612_ENST00000414007_TCGA-BP-4763-01A_SULF2_chr20_46331263_-_SRGAP2_chr1_206589249_length(transcript)=6114nt_BP=1236nt
GGGCCATTTCTGGACAACAGCTGCTATTTTCACTTGAGCCGAAGTTAATTTCTCGGGGAGTTCTCGGGCGCGCACAGGCAGCTCGGTTTG
CCCTGCGATTGAGCTGCGGGTCGCGGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGTGGCTGGAGGCGAGCGCGAGGCTTTCGGCAAA
GGCAGTCGAGTGTTTGCAGACCGGGGCGAGTCCTGTGAAAGCAGATAAAAGAAAACATTTATTAACGTGTCATTACGAGGGGAGCGCCCG
GCCGGGGCTGTCGCACTCCCCGCGGAACATTTGGCTCCCTCCAGCTCCGAGAGAGGAGAAGAAGAAAGCGGAAAAGAGGCAGATTCACGT
CGTTTCCAGCCAAGTGGACCTGATCGATGGCCCTCCTGAATTTATCACGATATTTGATTTATTAGCGATGCCCCCTGGTTTGTGTGTTAC
GCACACACACGTGCACACAAGGCTCTGGCTCGCTTCCCTCCCTCGTTTCCAGCTCCTGGGCGAATCCCACATCTGTTTCAACTCTCCGCC
GAGGGCGAGCAGGAGCGAGAGTGTGTCGAATCTGCGAGTGAAGAGGGACGAGGGAAAAGAAACAAAGCCACAGACGCAACTTGAGACTCC
CGCATCCCAAAAGAAGCACCAGATCAGCAAAAAAAGAAGATGGGCCCCCCGAGCCTCGTGCTGTGCTTGCTGTCCGCAACTGTGTTCTCC
CTGCTGGGTGGAAGCTCGGCCTTCCTGTCGCACCACCGCCTGAAAGGCAGGTTTCAGAGGGACCGCAGGAACATCCGCCCCAACATCATC
CTGGTGCTGACGGACGACCAGGATGTGGAGCTGGGTTCCATGCAGGTGATGAACAAGACCCGGCGCATCATGGAGCAGGGCGGGGCGCAC
TTCATCAACGCCTTCGTGACCACACCCATGTGCTGCCCCTCACGCTCCTCCATCCTCACTGGCAAGTACGTCCACAACCACAACACCTAC
ACCAACAATGAGAACTGCTCCTCGCCCTCCTGGCAGGCACAGCACGAGAGCCGCACCTTTGCCGTGTACCTCAATAGCACTGGCTACCGG
ACAGCTTTCTTCGGGAAGTATCTTAATGAATACAACGGCTCCTACGTGCCACCCGGCTGGAAGGAGTGGGTCGGACTCCTTAAAAACTCC
CGCTTTTATAACTACACGCTGTGTCGGAACGGGGTGAAAGAGAAGCACGGCTCCGACTACTCCAAGAAAATGAAAGAGTACCTGGAGGGC
AGGAACCTCATCACCAAGTTACAAGCCAAGCATGACCTTCTGCAGAAAACCCTGGGAGAAAGTCAGCGGACAGATTGCAGTCTAGCCAGG
CGCAGCTCAACTGTGAGGAAACAGGACTCCAGCCAGGCAATTCCTCTGGTGGTGGAAAGCTGTATCCGGTTTATCAGCAGACACGGACTA
CAGCATGAAGGAATTTTCCGGGTGTCAGGATCCCAGGTGGAAGTGAATGACATCAAAAATGCCTTTGAGAGAGGAGAGGACCCCCTGGCT
GGGGACCAGAACGACCATGACATGGATTCCATAGCTGGTGTCCTGAAGCTTTACTTCCGGGGGCTGGAACACCCTCTCTTCCCCAAGGAC
ATCTTTCATGACCTGATGGCCTGCGTCACAATGGACAACCTGCAGGAGAGAGCTCTGCACATCCGGAAAGTCCTCCTAGTCCTGCCCAAA
ACCACTCTGATTATCATGAGATACCTCTTTGCCTTCCTCAATCATTTATCACAGTTCAGTGAAGAGAACATGATGGACCCCTACAACCTC
GCCATCTGCTTCGGGCCCTCGCTAATGTCAGTGCCAGAGGGCCACGACCAGGTGTCCTGCCAAGCCCACGTGAATGAGCTGATCAAAACC
ATCATCATCCAGCATGAGAACATCTTCCCAAGCCCCAGGGAGCTGGAGGGCCCTGTCTACAGCAGAGGAGGAAGCATGGAGGATTACTGT
GATAGCCCTCATGGAGAGACTACCTCGGTTGAAGACTCAACCCAGGATGTGACCGCAGAGCACCACACGAGCGATGACGAATGTGAGCCC
ATCGAGGCCATTGCCAAGTTTGACTACGTGGGCCGGACAGCCCGAGAGCTGTCCTTTAAGAAGGGAGCATCCCTGCTGCTTTACCAGCGG
GCTTCCGACGACTGGTGGGAAGGCCGGCACAATGGCATCGACGGACTCATCCCCCATCAGTACATCGTGGTCCAAGACACCGAGGACGGT
GTCGTGGAGAGGTCCAGCCCCAAGTCTGAGATTGAGGTCATTTCTGAGCCACCTGAAGAAAAGGTGACAGCCAGAGCGGGGGCCAGCTGT
CCCAGTGGGGGTCATGTAGCCGATATTTATCTTGCAAACATCAACAAGCAAAGGAAGCGTCCAGAATCTGGGAGCATCCGGAAAACTTTT
CGGAGTGACAGCCATGGGCTGAGCAGTTCCCTGACTGACTCCTCCTCCCCAGGGGTGGGGGCTAGCTGCCGCCCATCCTCCCAGCCCATC
ATGAGCCAGAGCCTCCCCAAAGAAGGGCCAGATAAGTGTTCCATCAGTGGGCACGGGAGCCTCAACTCCATCAGCCGCCACTCATCCCTG
AAGAATCGGCTGGATAGTCCACAGATCCGGAAGACTGCCACAGCGGGAAGGTCAAAAAGCTTCAATAACCATCGGCCCATGGACCCTGAG
GTCATTGCTCAGGATATTGAGGCAACAATGAACTCGGCCCTGAATGAGCTACGGGAACTAGAACGGCAGAGCAGTGTCAAACACACCCCT
GACGTGGTTCTGGACACCTTGGAGCCCCTCAAAACCTCCCCAGTGGTGGCCCCCACGTCAGAGCCCTCCAGCCCTCTGCACACCCAGCTC
CTCAAGGACCCCGAGCCCGCCTTCCAGCGCAGCGCCAGTACTGCTGGGGACATCGCCTGCGCCTTCCGGCCTGTCAAGTCTGTCAAGATG
GCTGCCCCGGTCAAACCACCAGCCACACGGCCCAAGCCCACTGTCTTCCCCAAAACAAATGCCACTAGCCCTGGTGTCAACTCATCAACT
TCCCCACAGTCTACTGACAAGTCTTGTACTGTCTGAGGGATAATAATTTAATTGTTCTAGACAAGGGGACTATAGGGACTGACTGTTATT
AAAATCTTCCTATTTAACTAGCTTGGGGACTTCAGTTGAAAATTAGGTTCTAAGTTGTTCTTGCAGGAATTAGCCTCCCCGTCTCCCAAA
ACCTTGAGAATGAAGCCCTTGGTATCGCCTCTCCCTTCCCACTGCCCTCTGCTTCCCCCAGTCGTCGTAATTCAGCCAGCTGCAGTCCGT
ACCGTTCTTAGGTTAGCCAGAGACAGGTTTTCATTATCAGGTCACTGTGAAATCTGGTAAGGCAGTCCTGAGGACATGGGCTCAAGTCTC
AGTCCCCTCAGACCACGGTGATGCCTTGACCAGATGGTTGGCTACTGCCATCCAGCTTTCAGTGGCATCTTGTTTTGGGAACTGATTATA
GAGAATCATATATAGTCCAGTCTTCATTTTACATACACACACATATTTTACACACACACACATTTTACACACACACACACACACACACAC
ATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCTTTGTAAGTTATTGTGGCAGTTCACACAGTAGCCA
CCAGGGGTCTCTGTTTCCATTACAAACTTTGTTCTGTCTGGGCCAGAGAACCTAGCCTTTGAAATCTCTCCATCATATGAAACATAACGG
GATGGGACAATCCCGTAACCTGTTTGGGGTTGGGGGCTTTCTCTCTGTGTTCTTTCCATTGATGTGAATTGGTCATTGGTGTTTGCTCTT
GCCTCTCCTCCATCCCCTAGAAGTACACCCCCGTCTTATTAAGGAGCTTTTAAAGTTTTTCTGAATGTATAGACATTTCTCGGGTTCCTA
CCTTTGTCTCTGATGGACCATTTTCCATTTAAGACATTTTCCTGTATAAGACAGTTTTATAGCTGGTTCCTTTTAGGGTAAAGAGTCTTA
AGAGAGTTTTATTGTGTCTATGGCAGGTTTGGGAAAGGTAAGAAATGGGTCCTTTTTCCTCCTAATGTTTTTGGCACTTAAAACATAAAA
TTCATTATCCTATTAAAAAATTAAATTCAGCTTTGCTAATCCAGAAATTGTTCCCAAATGAAAACTTGTTTTAAGTCCACCCCTTAGTTT
CCTTATTTTACAAGGTCTCTCTTCAGGGACCAACAGGGGCTTAGAGAGCCTTAGTTAGATTAAAGGGAGACCCTACCTCTTAAAACCAGT
TTTCATTTATGCAAACAAGGACAATTAAGGGAACCCTGACCCCACAGGCTCTCAAGTCTTCCCAAGGCCAGAATCGAAAGAAAATTAAAA
TTTGAATGCTGAATATTCTGGCTCTACTCTGGCCTTTTTTCTGGTTCCCTTCCAAAATGCACAAATCATACCCTTGTCTGCTCCAATTCA
GTCTCCAAACCTGGTGCCTGTGCTCCTGGCCCCCCTAGCATCATGCTATCCCAGGAGTATCAGGACCAGACACATCCACAGCCAGGCTCA
TGGGTCTCAGACAGCAACTTGAGTTAAAGCTGAAACTCATCCTTCTTCTCTGTGTTTTCTGGTTTAAAAGCTGCACTTATATTTTAGCCT
TATTATTTTCTGTAGTTCCGGAGAGATGGTGGGTTGCCATTCTGGTAGGAAAATCTGAGTTTTCTTATCTTTGACCTAGAAGAGATTCTT
TTTGGACCAACCTGCGAAATTGGTAGTTAGGTCTATGGAAAGTGGTAGGATTTTTTTTTTTTAATCCTGTGCAAAGGAAAAGAGGTGCTT
TGTGGGAAATCACTAATGAGAAGGCTAACCTGCAGCACCAGAGAAACCTTTCCAAGTGCTAGGCAGGAGAACTGAAGAACTCTTTCAGTG
AAGTGAGTCAGCCTAGAAGAGGCAACCCACAGTCTTGATTTTTGTTGCTGTTTCCTGACCTGTTCTTGCCTGTCACCTGGGCCTACACAG
GTCCCGAGCCAACGGGGCTTTCATACCCAAGGATCTGTTTCCTTGCTGAAAATGAAACCCTATCTTTCACTTTACATTCCTTTCAATCCA
ACTGATCAAAACTGGTACCCACACTTGCCCTTTCTCCCTCTCTCCAGCACACTCCCCTCTAAGAAAGTAAAAGCAAAGCTTTCTTAATGG
CAACACTTTGGGCCTGTTCTGTTGCTCCTGCCTTATTTCTCTTTCAACCCTGTACATGACTCGTGTTCACCATCCCCTTGATCAGTGTCC
ATCCGCGCTAATTTGCATCATGAACTGAACAGTGTGTGAGTGGTCACCTACTAAACCCAGCTCTGGGGGCAGAGCTGTCTTCCCCATCTC
TGGTGCTCCTAACACCTGTGAGATGGTCCTGTCGAGAGGACTAGGAACCGATAGGAGGAGAGTCCTTCTCGGCAGAGCTCACTGCAAACA
ACTGGAATTGAGGTTGCACACTGTGATTTTTACACCGAAAAGCCAAAAGGAGCTGGCCATCCAGGGCCTAGGGAGACCAGCCTTCCTCAG
CTATGCTTGCCGAAACCAGCATGATGCTTCAAAGAGCCCTGCTCCACCCCTCATGGCATGGATCCTTTTCCTGGTGTGGACTCTGAAGGG
TCAGTCTTCGGGGAAGAGAGGTGGGGTGGGGCTACTAGCATCCCAATTTAGAAAACAGAGGAGTTTGTAGCCAGCAGCCTGTAAACTGGA
AACACTGGTCTCAGCCAACCTCCTCAGGGCGCCCTGGCTTCTCCCCAAGGAGATGAGGAGCGGTGATGCCAGCACCGGGATGCGCAGAGC
ACTGGAAGGGCTGGTGCAGATCTACTTCCCATGCAGAAGAGAAGTCACATCTTCCAGGGAATCGCAATGTTGTGGCGTCTGACTTGTATG
TCACATTTGTGTAAAATGGTATATTCTTTAAAATAGTGTTGATAACTGGAATATTGTATGTATGCTTGGAGATGCTTTGTGTGAACCTAA

>In-frame_ENST00000361612_ENST00000414007_TCGA-BP-4763-01A_SULF2_chr20_46331263_-_SRGAP2_chr1_206589249_length(amino acids)=808AA_start in transcript=669_stop in transcript=3095
MGPPSLVLCLLSATVFSLLGGSSAFLSHHRLKGRFQRDRRNIRPNIILVLTDDQDVELGSMQVMNKTRRIMEQGGAHFINAFVTTPMCCP
SRSSILTGKYVHNHNTYTNNENCSSPSWQAQHESRTFAVYLNSTGYRTAFFGKYLNEYNGSYVPPGWKEWVGLLKNSRFYNYTLCRNGVK
EKHGSDYSKKMKEYLEGRNLITKLQAKHDLLQKTLGESQRTDCSLARRSSTVRKQDSSQAIPLVVESCIRFISRHGLQHEGIFRVSGSQV
EVNDIKNAFERGEDPLAGDQNDHDMDSIAGVLKLYFRGLEHPLFPKDIFHDLMACVTMDNLQERALHIRKVLLVLPKTTLIIMRYLFAFL
NHLSQFSEENMMDPYNLAICFGPSLMSVPEGHDQVSCQAHVNELIKTIIIQHENIFPSPRELEGPVYSRGGSMEDYCDSPHGETTSVEDS
TQDVTAEHHTSDDECEPIEAIAKFDYVGRTARELSFKKGASLLLYQRASDDWWEGRHNGIDGLIPHQYIVVQDTEDGVVERSSPKSEIEV
ISEPPEEKVTARAGASCPSGGHVADIYLANINKQRKRPESGSIRKTFRSDSHGLSSSLTDSSSPGVGASCRPSSQPIMSQSLPKEGPDKC
SISGHGSLNSISRHSSLKNRLDSPQIRKTATAGRSKSFNNHRPMDPEVIAQDIEATMNSALNELRELERQSSVKHTPDVVLDTLEPLKTS

--------------------------------------------------------------
>In-frame_ENST00000467815_ENST00000414007_TCGA-BP-4763-01A_SULF2_chr20_46331263_-_SRGAP2_chr1_206589249_length(transcript)=6052nt_BP=1174nt
CTCGGGCGCGCACAGGCAGCTCGGTTTGCCCTGCGATTGAGCTGCGGGTCGCGGCCGGCGCCGGCCTCTCCAATGGCAAATGTGTGTGGC
TGGAGGCGAGCGCGAGGCTTTCGGCAAAGGCAGTCGAGTGTTTGCAGACCGGGGCGAGTCCTGTGAAAGCAGATAAAAGAAAACATTTAT
TAACGTGTCATTACGAGGGGAGCGCCCGGCCGGGGCTGTCGCACTCCCCGCGGAACATTTGGCTCCCTCCAGCTCCGAGAGAGGAGAAGA
AGAAAGCGGAAAAGAGGCAGATTCACGTCGTTTCCAGCCAAGTGGACCTGATCGATGGCCCTCCTGAATTTATCACGATATTTGATTTAT
TAGCGATGCCCCCTGGTTTGTGTGTTACGCACACACACGTGCACACAAGGCTCTGGCTCGCTTCCCTCCCTCGTTTCCAGCTCCTGGGCG
AATCCCACATCTGTTTCAACTCTCCGCCGAGGGCGAGCAGGAGCGAGAGTGTGTCGAATCTGCGAGTGAAGAGGGACGAGGGAAAAGAAA
CAAAGCCACAGACGCAACTTGAGACTCCCGCATCCCAAAAGAAGCACCAGATCAGCAAAAAAAGAAGATGGGCCCCCCGAGCCTCGTGCT
GTGCTTGCTGTCCGCAACTGTGTTCTCCCTGCTGGGTGGAAGCTCGGCCTTCCTGTCGCACCACCGCCTGAAAGGCAGGTTTCAGAGGGA
CCGCAGGAACATCCGCCCCAACATCATCCTGGTGCTGACGGACGACCAGGATGTGGAGCTGGGTTCCATGCAGGTGATGAACAAGACCCG
GCGCATCATGGAGCAGGGCGGGGCGCACTTCATCAACGCCTTCGTGACCACACCCATGTGCTGCCCCTCACGCTCCTCCATCCTCACTGG
CAAGTACGTCCACAACCACAACACCTACACCAACAATGAGAACTGCTCCTCGCCCTCCTGGCAGGCACAGCACGAGAGCCGCACCTTTGC
CGTGTACCTCAATAGCACTGGCTACCGGACAGCTTTCTTCGGGAAGTATCTTAATGAATACAACGGCTCCTACGTGCCACCCGGCTGGAA
GGAGTGGGTCGGACTCCTTAAAAACTCCCGCTTTTATAACTACACGCTGTGTCGGAACGGGGTGAAAGAGAAGCACGGCTCCGACTACTC
CAAGAAAATGAAAGAGTACCTGGAGGGCAGGAACCTCATCACCAAGTTACAAGCCAAGCATGACCTTCTGCAGAAAACCCTGGGAGAAAG
TCAGCGGACAGATTGCAGTCTAGCCAGGCGCAGCTCAACTGTGAGGAAACAGGACTCCAGCCAGGCAATTCCTCTGGTGGTGGAAAGCTG
TATCCGGTTTATCAGCAGACACGGACTACAGCATGAAGGAATTTTCCGGGTGTCAGGATCCCAGGTGGAAGTGAATGACATCAAAAATGC
CTTTGAGAGAGGAGAGGACCCCCTGGCTGGGGACCAGAACGACCATGACATGGATTCCATAGCTGGTGTCCTGAAGCTTTACTTCCGGGG
GCTGGAACACCCTCTCTTCCCCAAGGACATCTTTCATGACCTGATGGCCTGCGTCACAATGGACAACCTGCAGGAGAGAGCTCTGCACAT
CCGGAAAGTCCTCCTAGTCCTGCCCAAAACCACTCTGATTATCATGAGATACCTCTTTGCCTTCCTCAATCATTTATCACAGTTCAGTGA
AGAGAACATGATGGACCCCTACAACCTCGCCATCTGCTTCGGGCCCTCGCTAATGTCAGTGCCAGAGGGCCACGACCAGGTGTCCTGCCA
AGCCCACGTGAATGAGCTGATCAAAACCATCATCATCCAGCATGAGAACATCTTCCCAAGCCCCAGGGAGCTGGAGGGCCCTGTCTACAG
CAGAGGAGGAAGCATGGAGGATTACTGTGATAGCCCTCATGGAGAGACTACCTCGGTTGAAGACTCAACCCAGGATGTGACCGCAGAGCA
CCACACGAGCGATGACGAATGTGAGCCCATCGAGGCCATTGCCAAGTTTGACTACGTGGGCCGGACAGCCCGAGAGCTGTCCTTTAAGAA
GGGAGCATCCCTGCTGCTTTACCAGCGGGCTTCCGACGACTGGTGGGAAGGCCGGCACAATGGCATCGACGGACTCATCCCCCATCAGTA
CATCGTGGTCCAAGACACCGAGGACGGTGTCGTGGAGAGGTCCAGCCCCAAGTCTGAGATTGAGGTCATTTCTGAGCCACCTGAAGAAAA
GGTGACAGCCAGAGCGGGGGCCAGCTGTCCCAGTGGGGGTCATGTAGCCGATATTTATCTTGCAAACATCAACAAGCAAAGGAAGCGTCC
AGAATCTGGGAGCATCCGGAAAACTTTTCGGAGTGACAGCCATGGGCTGAGCAGTTCCCTGACTGACTCCTCCTCCCCAGGGGTGGGGGC
TAGCTGCCGCCCATCCTCCCAGCCCATCATGAGCCAGAGCCTCCCCAAAGAAGGGCCAGATAAGTGTTCCATCAGTGGGCACGGGAGCCT
CAACTCCATCAGCCGCCACTCATCCCTGAAGAATCGGCTGGATAGTCCACAGATCCGGAAGACTGCCACAGCGGGAAGGTCAAAAAGCTT
CAATAACCATCGGCCCATGGACCCTGAGGTCATTGCTCAGGATATTGAGGCAACAATGAACTCGGCCCTGAATGAGCTACGGGAACTAGA
ACGGCAGAGCAGTGTCAAACACACCCCTGACGTGGTTCTGGACACCTTGGAGCCCCTCAAAACCTCCCCAGTGGTGGCCCCCACGTCAGA
GCCCTCCAGCCCTCTGCACACCCAGCTCCTCAAGGACCCCGAGCCCGCCTTCCAGCGCAGCGCCAGTACTGCTGGGGACATCGCCTGCGC
CTTCCGGCCTGTCAAGTCTGTCAAGATGGCTGCCCCGGTCAAACCACCAGCCACACGGCCCAAGCCCACTGTCTTCCCCAAAACAAATGC
CACTAGCCCTGGTGTCAACTCATCAACTTCCCCACAGTCTACTGACAAGTCTTGTACTGTCTGAGGGATAATAATTTAATTGTTCTAGAC
AAGGGGACTATAGGGACTGACTGTTATTAAAATCTTCCTATTTAACTAGCTTGGGGACTTCAGTTGAAAATTAGGTTCTAAGTTGTTCTT
GCAGGAATTAGCCTCCCCGTCTCCCAAAACCTTGAGAATGAAGCCCTTGGTATCGCCTCTCCCTTCCCACTGCCCTCTGCTTCCCCCAGT
CGTCGTAATTCAGCCAGCTGCAGTCCGTACCGTTCTTAGGTTAGCCAGAGACAGGTTTTCATTATCAGGTCACTGTGAAATCTGGTAAGG
CAGTCCTGAGGACATGGGCTCAAGTCTCAGTCCCCTCAGACCACGGTGATGCCTTGACCAGATGGTTGGCTACTGCCATCCAGCTTTCAG
TGGCATCTTGTTTTGGGAACTGATTATAGAGAATCATATATAGTCCAGTCTTCATTTTACATACACACACATATTTTACACACACACACA
TTTTACACACACACACACACACACACACATATGTTTTTCTAGTCTCTGGCATGTGTAGCCTCTCCTGGTCATAGACCAGTCTCTTTGTAA
GTTATTGTGGCAGTTCACACAGTAGCCACCAGGGGTCTCTGTTTCCATTACAAACTTTGTTCTGTCTGGGCCAGAGAACCTAGCCTTTGA
AATCTCTCCATCATATGAAACATAACGGGATGGGACAATCCCGTAACCTGTTTGGGGTTGGGGGCTTTCTCTCTGTGTTCTTTCCATTGA
TGTGAATTGGTCATTGGTGTTTGCTCTTGCCTCTCCTCCATCCCCTAGAAGTACACCCCCGTCTTATTAAGGAGCTTTTAAAGTTTTTCT
GAATGTATAGACATTTCTCGGGTTCCTACCTTTGTCTCTGATGGACCATTTTCCATTTAAGACATTTTCCTGTATAAGACAGTTTTATAG
CTGGTTCCTTTTAGGGTAAAGAGTCTTAAGAGAGTTTTATTGTGTCTATGGCAGGTTTGGGAAAGGTAAGAAATGGGTCCTTTTTCCTCC
TAATGTTTTTGGCACTTAAAACATAAAATTCATTATCCTATTAAAAAATTAAATTCAGCTTTGCTAATCCAGAAATTGTTCCCAAATGAA
AACTTGTTTTAAGTCCACCCCTTAGTTTCCTTATTTTACAAGGTCTCTCTTCAGGGACCAACAGGGGCTTAGAGAGCCTTAGTTAGATTA
AAGGGAGACCCTACCTCTTAAAACCAGTTTTCATTTATGCAAACAAGGACAATTAAGGGAACCCTGACCCCACAGGCTCTCAAGTCTTCC
CAAGGCCAGAATCGAAAGAAAATTAAAATTTGAATGCTGAATATTCTGGCTCTACTCTGGCCTTTTTTCTGGTTCCCTTCCAAAATGCAC
AAATCATACCCTTGTCTGCTCCAATTCAGTCTCCAAACCTGGTGCCTGTGCTCCTGGCCCCCCTAGCATCATGCTATCCCAGGAGTATCA
GGACCAGACACATCCACAGCCAGGCTCATGGGTCTCAGACAGCAACTTGAGTTAAAGCTGAAACTCATCCTTCTTCTCTGTGTTTTCTGG
TTTAAAAGCTGCACTTATATTTTAGCCTTATTATTTTCTGTAGTTCCGGAGAGATGGTGGGTTGCCATTCTGGTAGGAAAATCTGAGTTT
TCTTATCTTTGACCTAGAAGAGATTCTTTTTGGACCAACCTGCGAAATTGGTAGTTAGGTCTATGGAAAGTGGTAGGATTTTTTTTTTTT
AATCCTGTGCAAAGGAAAAGAGGTGCTTTGTGGGAAATCACTAATGAGAAGGCTAACCTGCAGCACCAGAGAAACCTTTCCAAGTGCTAG
GCAGGAGAACTGAAGAACTCTTTCAGTGAAGTGAGTCAGCCTAGAAGAGGCAACCCACAGTCTTGATTTTTGTTGCTGTTTCCTGACCTG
TTCTTGCCTGTCACCTGGGCCTACACAGGTCCCGAGCCAACGGGGCTTTCATACCCAAGGATCTGTTTCCTTGCTGAAAATGAAACCCTA
TCTTTCACTTTACATTCCTTTCAATCCAACTGATCAAAACTGGTACCCACACTTGCCCTTTCTCCCTCTCTCCAGCACACTCCCCTCTAA
GAAAGTAAAAGCAAAGCTTTCTTAATGGCAACACTTTGGGCCTGTTCTGTTGCTCCTGCCTTATTTCTCTTTCAACCCTGTACATGACTC
GTGTTCACCATCCCCTTGATCAGTGTCCATCCGCGCTAATTTGCATCATGAACTGAACAGTGTGTGAGTGGTCACCTACTAAACCCAGCT
CTGGGGGCAGAGCTGTCTTCCCCATCTCTGGTGCTCCTAACACCTGTGAGATGGTCCTGTCGAGAGGACTAGGAACCGATAGGAGGAGAG
TCCTTCTCGGCAGAGCTCACTGCAAACAACTGGAATTGAGGTTGCACACTGTGATTTTTACACCGAAAAGCCAAAAGGAGCTGGCCATCC
AGGGCCTAGGGAGACCAGCCTTCCTCAGCTATGCTTGCCGAAACCAGCATGATGCTTCAAAGAGCCCTGCTCCACCCCTCATGGCATGGA
TCCTTTTCCTGGTGTGGACTCTGAAGGGTCAGTCTTCGGGGAAGAGAGGTGGGGTGGGGCTACTAGCATCCCAATTTAGAAAACAGAGGA
GTTTGTAGCCAGCAGCCTGTAAACTGGAAACACTGGTCTCAGCCAACCTCCTCAGGGCGCCCTGGCTTCTCCCCAAGGAGATGAGGAGCG
GTGATGCCAGCACCGGGATGCGCAGAGCACTGGAAGGGCTGGTGCAGATCTACTTCCCATGCAGAAGAGAAGTCACATCTTCCAGGGAAT
CGCAATGTTGTGGCGTCTGACTTGTATGTCACATTTGTGTAAAATGGTATATTCTTTAAAATAGTGTTGATAACTGGAATATTGTATGTA
TGCTTGGAGATGCTTTGTGTGAACCTAAGACTGTCACTCAACAGATGTTGGATTGGGGAAAATCCAAAGCACAACTTCAAAATAAAATAC

>In-frame_ENST00000467815_ENST00000414007_TCGA-BP-4763-01A_SULF2_chr20_46331263_-_SRGAP2_chr1_206589249_length(amino acids)=808AA_start in transcript=607_stop in transcript=3033
MGPPSLVLCLLSATVFSLLGGSSAFLSHHRLKGRFQRDRRNIRPNIILVLTDDQDVELGSMQVMNKTRRIMEQGGAHFINAFVTTPMCCP
SRSSILTGKYVHNHNTYTNNENCSSPSWQAQHESRTFAVYLNSTGYRTAFFGKYLNEYNGSYVPPGWKEWVGLLKNSRFYNYTLCRNGVK
EKHGSDYSKKMKEYLEGRNLITKLQAKHDLLQKTLGESQRTDCSLARRSSTVRKQDSSQAIPLVVESCIRFISRHGLQHEGIFRVSGSQV
EVNDIKNAFERGEDPLAGDQNDHDMDSIAGVLKLYFRGLEHPLFPKDIFHDLMACVTMDNLQERALHIRKVLLVLPKTTLIIMRYLFAFL
NHLSQFSEENMMDPYNLAICFGPSLMSVPEGHDQVSCQAHVNELIKTIIIQHENIFPSPRELEGPVYSRGGSMEDYCDSPHGETTSVEDS
TQDVTAEHHTSDDECEPIEAIAKFDYVGRTARELSFKKGASLLLYQRASDDWWEGRHNGIDGLIPHQYIVVQDTEDGVVERSSPKSEIEV
ISEPPEEKVTARAGASCPSGGHVADIYLANINKQRKRPESGSIRKTFRSDSHGLSSSLTDSSSPGVGASCRPSSQPIMSQSLPKEGPDKC
SISGHGSLNSISRHSSLKNRLDSPQIRKTATAGRSKSFNNHRPMDPEVIAQDIEATMNSALNELRELERQSSVKHTPDVVLDTLEPLKTS

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Fusion Gene PPI Analysis for SULF2-SRGAP2


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for SULF2-SRGAP2


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for SULF2-SRGAP2


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneSULF2C0014175Endometriosis2CTD_human
HgeneSULF2C0269102Endometrioma2CTD_human