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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:SZT2-PITPNC1 (FusionGDB2 ID:87998) |
Fusion Gene Summary for SZT2-PITPNC1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: SZT2-PITPNC1 | Fusion gene ID: 87998 | Hgene | Tgene | Gene symbol | SZT2 | PITPNC1 | Gene ID | 23334 | 26207 |
Gene name | SZT2 subunit of KICSTOR complex | phosphatidylinositol transfer protein cytoplasmic 1 | |
Synonyms | C1orf84|EIEE18|KIAA0467|SZT2A|SZT2B | M-RDGB-beta|MRDGBbeta|RDGB-BETA|RDGBB|RDGBB1 | |
Cytomap | 1p34.2 | 17q24.2 | |
Type of gene | protein-coding | protein-coding | |
Description | KICSTOR complex protein SZT2SZT2 subunit KICSTOR complexSZT2, KICSTOR complex subunitseizure threshold 2 protein homolog | cytoplasmic phosphatidylinositol transfer protein 1M-rdgB betamammalian rdgB homolog betaretinal degeneration B beta 1retinal degeneration B homolog beta | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000562955, ENST00000372442, ENST00000310739, ENST00000372450, ENST00000471177, | ENST00000580974, ENST00000299954, ENST00000335257, ENST00000581322, | |
Fusion gene scores | * DoF score | 9 X 9 X 4=324 | 31 X 22 X 12=8184 |
# samples | 9 | 52 | |
** MAII score | log2(9/324*10)=-1.84799690655495 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(52/8184*10)=-3.97622261671687 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: SZT2 [Title/Abstract] AND PITPNC1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | SZT2(43855666)-PITPNC1(65528918), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | PITPNC1 | GO:0015914 | phospholipid transport | 22822086 |
Fusion gene breakpoints across SZT2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across PITPNC1 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | Non-Cancer | ERR188030 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
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Fusion Gene ORF analysis for SZT2-PITPNC1 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000562955 | ENST00000580974 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
In-frame | ENST00000562955 | ENST00000299954 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
In-frame | ENST00000562955 | ENST00000335257 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
In-frame | ENST00000562955 | ENST00000581322 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
intron-3CDS | ENST00000372442 | ENST00000580974 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
intron-3CDS | ENST00000372442 | ENST00000299954 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
intron-3CDS | ENST00000372442 | ENST00000335257 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
intron-3CDS | ENST00000372442 | ENST00000581322 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
In-frame | ENST00000310739 | ENST00000580974 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
In-frame | ENST00000310739 | ENST00000299954 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
In-frame | ENST00000310739 | ENST00000335257 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
In-frame | ENST00000310739 | ENST00000581322 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
In-frame | ENST00000372450 | ENST00000580974 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
In-frame | ENST00000372450 | ENST00000299954 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
In-frame | ENST00000372450 | ENST00000335257 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
In-frame | ENST00000372450 | ENST00000581322 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
intron-3CDS | ENST00000471177 | ENST00000580974 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
intron-3CDS | ENST00000471177 | ENST00000299954 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
intron-3CDS | ENST00000471177 | ENST00000335257 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
intron-3CDS | ENST00000471177 | ENST00000581322 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000562955 | SZT2 | chr1 | 43855666 | + | ENST00000580974 | PITPNC1 | chr17 | 65528918 | + | 5465 | 27 | 0 | 785 | 261 |
ENST00000562955 | SZT2 | chr1 | 43855666 | + | ENST00000299954 | PITPNC1 | chr17 | 65528918 | + | 1738 | 27 | 0 | 785 | 261 |
ENST00000562955 | SZT2 | chr1 | 43855666 | + | ENST00000335257 | PITPNC1 | chr17 | 65528918 | + | 1619 | 27 | 0 | 977 | 325 |
ENST00000562955 | SZT2 | chr1 | 43855666 | + | ENST00000581322 | PITPNC1 | chr17 | 65528918 | + | 1103 | 27 | 0 | 977 | 325 |
ENST00000310739 | SZT2 | chr1 | 43855666 | + | ENST00000580974 | PITPNC1 | chr17 | 65528918 | + | 5552 | 114 | 87 | 872 | 261 |
ENST00000310739 | SZT2 | chr1 | 43855666 | + | ENST00000299954 | PITPNC1 | chr17 | 65528918 | + | 1825 | 114 | 87 | 872 | 261 |
ENST00000310739 | SZT2 | chr1 | 43855666 | + | ENST00000335257 | PITPNC1 | chr17 | 65528918 | + | 1706 | 114 | 87 | 1064 | 325 |
ENST00000310739 | SZT2 | chr1 | 43855666 | + | ENST00000581322 | PITPNC1 | chr17 | 65528918 | + | 1190 | 114 | 87 | 1064 | 325 |
ENST00000372450 | SZT2 | chr1 | 43855666 | + | ENST00000580974 | PITPNC1 | chr17 | 65528918 | + | 5552 | 114 | 87 | 872 | 261 |
ENST00000372450 | SZT2 | chr1 | 43855666 | + | ENST00000299954 | PITPNC1 | chr17 | 65528918 | + | 1825 | 114 | 87 | 872 | 261 |
ENST00000372450 | SZT2 | chr1 | 43855666 | + | ENST00000335257 | PITPNC1 | chr17 | 65528918 | + | 1706 | 114 | 87 | 1064 | 325 |
ENST00000372450 | SZT2 | chr1 | 43855666 | + | ENST00000581322 | PITPNC1 | chr17 | 65528918 | + | 1190 | 114 | 87 | 1064 | 325 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000562955 | ENST00000580974 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + | 0.000374286 | 0.9996257 |
ENST00000562955 | ENST00000299954 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + | 0.000641256 | 0.9993587 |
ENST00000562955 | ENST00000335257 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + | 0.000417744 | 0.99958223 |
ENST00000562955 | ENST00000581322 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + | 0.001119486 | 0.99888057 |
ENST00000310739 | ENST00000580974 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + | 0.000376403 | 0.99962354 |
ENST00000310739 | ENST00000299954 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + | 0.000605216 | 0.9993948 |
ENST00000310739 | ENST00000335257 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + | 0.000409644 | 0.99959034 |
ENST00000310739 | ENST00000581322 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + | 0.001103015 | 0.99889696 |
ENST00000372450 | ENST00000580974 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + | 0.000376403 | 0.99962354 |
ENST00000372450 | ENST00000299954 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + | 0.000605216 | 0.9993948 |
ENST00000372450 | ENST00000335257 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + | 0.000409644 | 0.99959034 |
ENST00000372450 | ENST00000581322 | SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528918 | + | 0.001103015 | 0.99889696 |
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Fusion Genomic Features for SZT2-PITPNC1 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528917 | + | 2.76E-06 | 0.99999726 |
SZT2 | chr1 | 43855666 | + | PITPNC1 | chr17 | 65528917 | + | 2.76E-06 | 0.99999726 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for SZT2-PITPNC1 |
Go to FGviewer for the breakpoints of chr1:43855666-chr17:65528918 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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Fusion Gene Sequence for SZT2-PITPNC1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000562955_ENST00000580974_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(transcript)=5465nt_BP=27nt ATGGCCTCGGAGCGCCCGGAGCCGGAGTACAAAATTGGACAGCTGTACATGATCAGCAAACACAGCCATGAACAGAGTGACCGGGGAGAA GGGGTGGAGGTCGTCCAGAATGAGCCCTTTGAGGACCCTCACCATGGCAATGGGCAGTTCACCGAGAAGCGGGTGTATCTCAACAGCAAA CTGCCTAGTTGGGCTAGAGCTGTTGTCCCCAAAATATTTTATGTGACAGAGAAGGCTTGGAACTATTATCCCTACACAATTACAGAATAC ACATGTTCCTTTCTGCCGAAATTCTCCATTCATATAGAAACCAAGTATGAGGACAACAAAGGAAGCAATGACACCATTTTCGACAATGAA GCCAAAGACGTGGAGAGAGAAGTTTGCTTTATTGATATTGCCTGCGATGAAATTCCAGAGCGCTACTACAAAGAATCTGAGGATCCTAAG CACTTCAAGTCAGAGAAGACAGGACGGGGACAGTTGAGGGAAGGCTGGAGAGATAGTCATCAGCCTATCATGTGCTCCTACAAGCTGGTG ACTGTGAAGTTTGAGGTCTGGGGGCTTCAGACCAGAGTGGAACAATTTGTACACAAGGTGGTCCGAGACATTCTGCTGATTGGACATAGA CAGGCTTTTGCATGGGTTGATGAGTGGTATGATATGACAATGGATGATGTTCGGGAATACGAGAAAAACATGCATGAACAAACCAACATA AAAGTTTGCAATCAGCATTCCTCCCCTGTGGATGACATAGAGAGTCATGCCCAAACAAGTACATGACAATGGATGAAGTCCGAGAATTTG AACGAGCCACTCAGGAAGCCACCAACAAGAAAATCGGCATTTTCCCACCTGCAATTTCTATCTCCAGCATCCCCCTGCTGCCTTCTTCCG TCCGCAGTGCGCCTTCTAGTGCTCCATCCACCCCTCTCTCCACAGACGCACCCGAATTTCTGTCCGTTCCCAAAGATCGGCCCCGGAAAA AGTCTGCCCCAGAAACTCTCACACTTCCAGACCCTGAGAAAAAAGCCACCCTGAATTTACCCGGCATGCACTCTTCAGATAAGCCATGTC GGCCCAAATCTGAGTAACTTTATATAAATATCTCATGGGGTTTTATATTTTCATTTGTTGTTGTTGTTTTTTTTTAAGAATCTTCTGATA GAGAAAAAGACTGCTTTGTCACTCAAACATGTTCCTTCGACCTTTCAGTGTGCATGTGACTCAGTAACTTCACATAGAATATGATTCCCT AAGTATGCTACACAGCATCATATTAGATGTAAGATGTAAGACTTGCAAAGGACAGAAGGAATCTTCTGTAACCACATAGCTGTATGCCAG AGAGGAAGCCTTGTTATTGGGCATTTGATGAGGTTTGGCATGGACTTCAAGGATAAATGAATGAAAACTTTGCACCACTTTTGTTACAAG GTACGGTAGAAAATAGTGAAGTCAGTTTCCTCTCATCAAATCTAAAATTCTCCAAAATACTCTCAGGCATAACATACTTAGCTGTTAAAT TTTGAACTGCTAATTACTAATACTTGAATACCAATAGTTACTGAGATTCCTATTTTGTGGTTAGTCTGACTCAGGATTTGGAGCCTAATT AACTCTAAACTTTTGAAAATTTTAATCATCAAGCTATAGAGGCTCCAAGTGCAATTAATAATAACTCATTTATACCTTCCACAGAATTTA ATAAAGATTCTACTTGTTTCTGTCTTTTAATAACTTTCCCCTTTTGTGCCCTTGTGGCCTCAGAAATCCTTAAGAATTGCATGGATGAAT GTGACCATAACTGATTTTGGAATGGTTCAGTTTAGGAACCAAGAGGCCCAGGTGAGGCAACATCTTTTTTCTCTACAGGTACCAACAAAC CTTGACTTGTCAGCTTCCATCATCAATTAAGATTCTCAGAATTTGCAATTAATTGAATAGAATTCATTTACTATCTGCCCACTCAAAGAA GTACAAGGGTAGAGTAAGCTAACTGGGCTTTAACATGGTCAGAATGTCTGGTGCATGAACTATAAAAAAGAGAACTGTCTCCCATCCCCT TCCTTGTTTTACTCTTAGTAACATCCAGAATTCCCTGGAACAGATTGCCTACCACCAGACCTTAGAAAAGACTGTCATTCTCTTGCTCCT TACTTGAAATACAAATATTGGGAATGTCACAGACATCAAGCAACTACTGTCAAGTGGGAGGAGAGAATGAGCAGAATTGCTGACTCCTAT TTGTAGAGTGAAAAGGAGGAGTGATAATAGATGCCCTTCTGTCTAGCTTTCCTTTCTTCAACTAGTGGTAATGCAAGATTAGAATCAAGG TTGACAGGAGGCAAGGTCACTCACTGAAGTGACAGAAAGACAATTCTCCTTTGCTCCAAAGAGAGAAATCTGTCACCTTTGCACCTCACT GCCTTTAAACACAGACGGGAGGGCAGGCCAAATCTCAGCATTGACTTTTGTCCTCCAAGAGAGGAAGAGAAGAAGTAATTGGGCAACTTG GAGGCCCACGCCCCAGCTAGCCTTCCTGATCGTAACCTCCAACCTCAGGAAAGGGACCTTCCCAAAACACAGATCCCAAAGGAAACAAAA TAGACCAAGGAGCATAATCTGCTTCTCTCACACAGCCTCTCTGCCAGTGGACCCTGCCTGCTTCCCTCTCAGTGCTCAGCACTCTGTGTA GTGTCTTTCAGGTTGATACACTCTCCCAAGGTGCAGGCGCTGGCCCCATGAGCCCAGCACCAAAGTTTTCTAAGTCATAGGTCAGACTGT CAAGATCATTTCTTTATCTATAGGTTGATATTTAGCTTAAAAAAAAAGAATAAACCTAGAACTCAAAGGAAACCTGTTGCAAATAGCTTA GATCAACAGTGTATCTCTTCCCTAAGAATGATAGTATCTTAGTAAGACACCTTCTATGCATGGTATGGAAGCATGATTTTTGCTTGTGGG AAAACCTAATATTTTATCAGACCCCTCGGACTTCTCAATCCCTCCCTCTCCACACAGTAGTACTTAATGAAAATGTTTTGCTTTAGAGAG CAAAATGCTACTTTCAGAAGACACTGAAATAGTATATGTATTTGCTTACCATTTGCAAGCTAAAATCAAGGTGGGATGGGGTCATTATTT TCACATAGAATGTATTTATTTTGTGCAGGCTGTTAAACACATCTGGCACCTAGTTTTTCCATTAAGAGCATTGCTATTTTCCCTTTTTAT AAAGTAGCTTCTGCTGTCAAGGTTAACAATTCTATATGCTTTAGGAAGCTAAGTTCTAATTTCCTTTTGTGAGTTTCATTTCTTTTATAA CCAGTATGTTACCACAGACATCAGTTGCAAAGCTACGATGATAGTGTGATTCTTAGCCGAAAAAAAAGCGTGTGCTCTTAAAGTATGTTC AGTTTTTCTGTCTACATATGCTTTGTGTGAGTTAAAAAGGGGGTGGGTGGTGTAAATATTCCTTTAGCTGCTTTGCATATTTAACCCAGT CATCAAAAGGCATAAATGACTTCAATATTTTATATATCTTGGTTTTCAAGTATCATTTCACATTCTCTATACATGACTTTGTTATTGTGG AATACAAGCCTGCAATGGATGTATATATACAGAACATTAATAATTCTTAGAAGGATGGAAGCCAAATGGCTGCATGATGGAAATTAGAAG AAAAAAAAAGCAGAAACTTGAATTTGCTAAGCATGTTTGGGGGGAAATAGAATCCTTAACTCAGTGCCTCTGTCTGCGATATGGAAACCT TCAACTTTGTTCACCAAAATTGTATTATACCTGTGTATATATATATATATATATATATATAAATATAAATATAGTATAGTGAATCAGACA CCATCAGTTTTAAGTCTCTGGTAGCCAAACTTAAATAAATAATCCATAGAATATCACATACGTTCACTCCATCTTCATCTCTGAAGTTAG TGGAGACCATCAAAATGACTGTACATTTCATAACTCTGGGAAGATTTCAAATGTGAAGTGCCCCTGTGCATTTTCTTGGCCATAGCACGG CATTCTTGCTTTAGCTGTGCTTTCCTGGGATGAGAAGATCTTGGTGTATTTAACACATAAGCTTTGTTAGAAATCACCTCTGAAGATCAT TTCATTTTCTCACTTTGGGTTGTTGCAAGACAAAGCAAAGGAAAAGGAACACAATGAAGGAGGCCGTGACATTTTTAGTTGCCACCGTTG TAACTCAAACAATATGGGTTTGTTGGTGAACTGATTTATCAAGGCTTCTGTTACGGTTTTGCATCTGTGTGTGAGGAAAATTTTAATTTA TTTGGAAGTATTTATTAGCCATGTTGTTGGTCCTGAAAATAAATCTCTAAGTAGCACAGTTGTGGGTATATTATGCAGACACTTACCACA ATACCTGCAAAAGTAACTGTGGTTTTCTTTCAAGACACTGTAATAAACAGTGAACTAAGAGAATAGATTCTGATACATCTCGATAAATCA TTCTCTGCAAAAGTTTCAGGGCTAATGTATTTATGTGTATTTTTAAATTCTACTTTCTTTGGCATCTCTTCATGGCTCAGCGACAACAAA GTAATAGGTCATTGGCTGGCTTACGTCGATAGGAATTTTACTCTTAAGAAGGGCCAGTGTATAGCTGACTCTACATATAATGTGTAATCA GATAATCCAATAGAGAGGAATTGTCCAAATAGTTTTAGTACCTTTCTGATCATCTGACTCAGTAGGCTAGGAGACAATCTGTCATCTGAG CCATAGTTCTTGAGATTTAAAAAGTCTGTCCAGTGACTGCAATCTGATTATGAATAAACTATTTTAACTATTCATTCTTGCTGAAACTGA AGTGTACACAATAGCACACTGTTGGCATGCTGAGGCAAAACATTGGGTTCTTTTGTGTTCTACCTTCAAAACAATCTGTTTGCATTTGAA ATATAAGTGTTTAAGCTTTTTAGGAGTTAGTGTAATAAGAGAATGTGAATATGTTGGGAAATTTTCAGATGCCATTAATAATTGTAATTT TGTTGTTAAATTAACAAGGACTTTAGGATAAGCCTCTTGATGTTTTTTGCTTTAAATTGAAAGCATGTCTGTCAAATTGCAAGTCTCCCT TCAGTTTCTATATATCACCCAGGAGAGGGTCTCTGAGTTGGTGTTGTACCTGTACCACTCACATGTAGCTCAAGTGTAATTTGTAGTGTT TACATTCAAGCTGGGATCTTGATTGGTTAAATTAATCCACATACCACTGCCACTGCTGAAGGACCAGGTGTTGGAATACACAGCATTACA GACTATAAGCAAAGCAAACAAAAGTTGATCCTTACATATGCCATCCTTCTGTGTCATTTTGTGGCTGTTCTGTGTTTTTCTTCCTAGTTA >In-frame_ENST00000562955_ENST00000580974_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(amino acids)=261AA_start in transcript=0_stop in transcript=785 MASERPEPEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEY TCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLV -------------------------------------------------------------- >In-frame_ENST00000562955_ENST00000299954_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(transcript)=1738nt_BP=27nt ATGGCCTCGGAGCGCCCGGAGCCGGAGTACAAAATTGGACAGCTGTACATGATCAGCAAACACAGCCATGAACAGAGTGACCGGGGAGAA GGGGTGGAGGTCGTCCAGAATGAGCCCTTTGAGGACCCTCACCATGGCAATGGGCAGTTCACCGAGAAGCGGGTGTATCTCAACAGCAAA CTGCCTAGTTGGGCTAGAGCTGTTGTCCCCAAAATATTTTATGTGACAGAGAAGGCTTGGAACTATTATCCCTACACAATTACAGAATAT AAGTGTTCCTTTCTGCCGAAATTCTCCATTCATATAGAAACCAAGTATGAGGACAACAAAGGAAGCAATGACACCATTTTCGACAATGAA GCCAAAGACGTGGAGAGAGAAGTTTGCTTTATTGATATTGCCTGCGATGAAATTCCAGAGCGCTACTACAAAGAATCTGAGGATCCTAAG CACTTCAAGTCAGAGAAGACAGGACGGGGACAGTTGAGGGAAGGCTGGAGAGATAGTCATCAGCCTATCATGTGCTCCTACAAGCTGGTG ACTGTGAAGTTTGAGGTCTGGGGGCTTCAGACCAGAGTGGAACAATTTGTACACAAGGTGGTCCGAGACATTCTGCTGATTGGACATAGA CAGGCTTTTGCATGGGTTGATGAGTGGTATGATATGACAATGGATGATGTTCGGGAATACGAGAAAAACATGCATGAACAAACCAACATA AAAGTTTGCAATCAGCATTCCTCCCCTGTGGATGACATAGAGAGTCATGCCCAAACAAGTACATGACAATGGATGAAGTCCGAGAATTTG AACGAGCCACTCAGGAAGCCACCAACAAGAAAATCGGCATTTTCCCACCTGCAATTTCTATCTCCAGCATCCCCCTGCTGCCTTCTTCCG TCCGCAGTGCGCCTTCTAGTGCTCCATCCACCCCTCTCTCCACAGACGCACCCGAATTTCTGTCCGTTCCCAAAGATCGGCCCCGGAAAA AGTCTGCCCCAGAAACTCTCACACTTCCAGACCCTGAGAAAAAAGCCACCCTGAATTTACCCGGCATGCACTCTTCAGATAAGCCATGTC GGCCCAAATCTGAGTAACTTTATATAAATATCTCATGGGGTTTTATATTTTCATTTGTTGTTGTTGTTTTTTTTTAAGAATCTTCTGATA GAGAAAAAGACTGCTTTGTCACTCAAACATGTTCCTTCGACCTTTCAGTGTGCATGTGACTCAGTAACTTCACATAGAATATGATTCCCT AAGTATGCTACACAGCATCATATTAGATGTAAGATGTAAGACTTGCAAAGGACAGAAGGAATCTTCTGTAACCACATAGCTGTATGCCAG AGAGGAAGCCTTGTTATTGGGCATTTGATGAGGTTTGGCATGGACTTCAAGGATAAATGAATGAAAACTTTGCACCACTTTTGTTACAAG GTACGGTAGAAAATAGTGAAGTCAGTTTCCTCTCATCAAATCTAAAATTCTCCAAAATACTCTCAGGCATAACATACTTAGCTGTTAAAT TTTGAACTGCTAATTACTAATACTTGAATACCAATAGTTACTGAGATTCCTATTTTGTGGTTAGTCTGACTCAGGATTTGGAGCCTAATT AACTCTAAACTTTTGAAAATTTTAATCATCAAGCTATAGAGGCTCCAAGTGCAATTAATAATAACTCATTTATACCTTCCACAGAATTTA >In-frame_ENST00000562955_ENST00000299954_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(amino acids)=261AA_start in transcript=0_stop in transcript=785 MASERPEPEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEY KCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLV -------------------------------------------------------------- >In-frame_ENST00000562955_ENST00000335257_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(transcript)=1619nt_BP=27nt ATGGCCTCGGAGCGCCCGGAGCCGGAGTACAAAATTGGACAGCTGTACATGATCAGCAAACACAGCCATGAACAGAGTGACCGGGGAGAA GGGGTGGAGGTCGTCCAGAATGAGCCCTTTGAGGACCCTCACCATGGCAATGGGCAGTTCACCGAGAAGCGGGTGTATCTCAACAGCAAA CTGCCTAGTTGGGCTAGAGCTGTTGTCCCCAAAATATTTTATGTGACAGAGAAGGCTTGGAACTATTATCCCTACACAATTACAGAATAT AAGTGTTCCTTTCTGCCGAAATTCTCCATTCATATAGAAACCAAGTATGAGGACAACAAAGGAAGCAATGACACCATTTTCGACAATGAA GCCAAAGACGTGGAGAGAGAAGTTTGCTTTATTGATATTGCCTGCGATGAAATTCCAGAGCGCTACTACAAAGAATCTGAGGATCCTAAG CACTTCAAGTCAGAGAAGACAGGACGGGGACAGTTGAGGGAAGGCTGGAGAGATAGTCATCAGCCTATCATGTGCTCCTACAAGCTGGTG ACTGTGAAGTTTGAGGTCTGGGGGCTTCAGACCAGAGTGGAACAATTTGTACACAAGGTGGTCCGAGACATTCTGCTGATTGGACATAGA CAGGCTTTTGCATGGGTTGATGAGTGGTATGACATGACAATGGATGAAGTCCGAGAATTTGAACGAGCCACTCAGGAAGCCACCAACAAG AAAATCGGCATTTTCCCACCTGCAATTTCTATCTCCAGCATCCCCCTGCTGCCTTCTTCCGTCCGCAGTGCGCCTTCTAGTGCTCCATCC ACCCCTCTCTCCACAGACGCACCCGAATTTCTGTCCGTTCCCAAAGATCGGCCCCGGAAAAAGTCTGCCCCAGAAACTCTCACACTTCCA GACCCTGAGAAAAAAGCCACCCTGAATTTACCCGGCATGCACTCTTCAGATAAGCCATGTCGGCCCAAATCTGAGTAACTTTATATAAAT ATCTCATGGGGTTTTATATTTTCATTTGTTGTTGTTGTTTTTTTTTAAGAATCTTCTGATAGAGAAAAAGACTGCTTTGTCACTCAAACA TGTTCCTTCGACCTTTCAGTGTGCATGTGACTCAGTAACTTCACATAGAATATGATTCCCTAAGTATGCTACACAGCATCATATTAGATG TAAGATGTAAGACTTGCAAAGGACAGAAGGAATCTTCTGTAACCACATAGCTGTATGCCAGAGAGGAAGCCTTGTTATTGGGCATTTGAT GAGGTTTGGCATGGACTTCAAGGATAAATGAATGAAAACTTTGCACCACTTTTGTTACAAGGTACGGTAGAAAATAGTGAAGTCAGTTTC CTCTCATCAAATCTAAAATTCTCCAAAATACTCTCAGGCATAACATACTTAGCTGTTAAATTTTGAACTGCTAATTACTAATACTTGAAT ACCAATAGTTACTGAGATTCCTATTTTGTGGTTAGTCTGACTCAGGATTTGGAGCCTAATTAACTCTAAACTTTTGAAAATTTTAATCAT >In-frame_ENST00000562955_ENST00000335257_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(amino acids)=325AA_start in transcript=0_stop in transcript=977 MASERPEPEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEY KCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLV TVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREFERATQEATNKKIGIFPPAISISSIPLLPSSVRSAPSSAPS -------------------------------------------------------------- >In-frame_ENST00000562955_ENST00000581322_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(transcript)=1103nt_BP=27nt ATGGCCTCGGAGCGCCCGGAGCCGGAGTACAAAATTGGACAGCTGTACATGATCAGCAAACACAGCCATGAACAGAGTGACCGGGGAGAA GGGGTGGAGGTCGTCCAGAATGAGCCCTTTGAGGACCCTCACCATGGCAATGGGCAGTTCACCGAGAAGCGGGTGTATCTCAACAGCAAA CTGCCTAGTTGGGCTAGAGCTGTTGTCCCCAAAATATTTTATGTGACAGAGAAGGCTTGGAACTATTATCCCTACACAATTACAGAATAC ACATGTTCCTTTCTGCCGAAATTCTCCATTCATATAGAAACCAAGTATGAGGACAACAAAGGAAGCAATGACACCATTTTCGACAATGAA GCCAAAGACGTGGAGAGAGAAGTTTGCTTTATTGATATTGCCTGCGATGAAATTCCAGAGCGCTACTACAAAGAATCTGAGGATCCTAAG CACTTCAAGTCAGAGAAGACAGGACGGGGACAGTTGAGGGAAGGCTGGAGAGATAGTCATCAGCCTATCATGTGCTCCTACAAGCTGGTG ACTGTGAAGTTTGAGGTCTGGGGGCTTCAGACCAGAGTGGAACAATTTGTACACAAGGTGGTCCGAGACATTCTGCTGATTGGACATAGA CAGGCTTTTGCATGGGTTGATGAGTGGTATGACATGACAATGGATGAAGTCCGAGAATTTGAACGAGCCACTCAGGAAGCCACCAACAAG AAAATCGGCATTTTCCCACCTGCAATTTCTATCTCCAGCATCCCCCTGCTGCCTTCTTCCGTCCGCAGTGCGCCTTCTAGTGCTCCATCC ACCCCTCTCTCCACAGACGCACCCGAATTTCTGTCCGTTCCCAAAGATCGGCCCCGGAAAAAGTCTGCCCCAGAAACTCTCACACTTCCA GACCCTGAGAAAAAAGCCACCCTGAATTTACCCGGCATGCACTCTTCAGATAAGCCATGTCGGCCCAAATCTGAGTAACTTTATATAAAT ATCTCATGGGGTTTTATATTTTCATTTGTTGTTGTTGTTTTTTTTTAAGAATCTTCTGATAGAGAAAAAGACTGCTTTGTCACTCAAACA >In-frame_ENST00000562955_ENST00000581322_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(amino acids)=325AA_start in transcript=0_stop in transcript=977 MASERPEPEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEY TCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLV TVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREFERATQEATNKKIGIFPPAISISSIPLLPSSVRSAPSSAPS -------------------------------------------------------------- >In-frame_ENST00000310739_ENST00000580974_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(transcript)=5552nt_BP=114nt GGTTCCTGCTGGGTGCCGAGGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCTCACTGGCCCGGGCCGGCGCGGGAGGGCTGTGTGATG GCCTCGGAGCGCCCGGAGCCGGAGTACAAAATTGGACAGCTGTACATGATCAGCAAACACAGCCATGAACAGAGTGACCGGGGAGAAGGG GTGGAGGTCGTCCAGAATGAGCCCTTTGAGGACCCTCACCATGGCAATGGGCAGTTCACCGAGAAGCGGGTGTATCTCAACAGCAAACTG CCTAGTTGGGCTAGAGCTGTTGTCCCCAAAATATTTTATGTGACAGAGAAGGCTTGGAACTATTATCCCTACACAATTACAGAATACACA TGTTCCTTTCTGCCGAAATTCTCCATTCATATAGAAACCAAGTATGAGGACAACAAAGGAAGCAATGACACCATTTTCGACAATGAAGCC AAAGACGTGGAGAGAGAAGTTTGCTTTATTGATATTGCCTGCGATGAAATTCCAGAGCGCTACTACAAAGAATCTGAGGATCCTAAGCAC TTCAAGTCAGAGAAGACAGGACGGGGACAGTTGAGGGAAGGCTGGAGAGATAGTCATCAGCCTATCATGTGCTCCTACAAGCTGGTGACT GTGAAGTTTGAGGTCTGGGGGCTTCAGACCAGAGTGGAACAATTTGTACACAAGGTGGTCCGAGACATTCTGCTGATTGGACATAGACAG GCTTTTGCATGGGTTGATGAGTGGTATGATATGACAATGGATGATGTTCGGGAATACGAGAAAAACATGCATGAACAAACCAACATAAAA GTTTGCAATCAGCATTCCTCCCCTGTGGATGACATAGAGAGTCATGCCCAAACAAGTACATGACAATGGATGAAGTCCGAGAATTTGAAC GAGCCACTCAGGAAGCCACCAACAAGAAAATCGGCATTTTCCCACCTGCAATTTCTATCTCCAGCATCCCCCTGCTGCCTTCTTCCGTCC GCAGTGCGCCTTCTAGTGCTCCATCCACCCCTCTCTCCACAGACGCACCCGAATTTCTGTCCGTTCCCAAAGATCGGCCCCGGAAAAAGT CTGCCCCAGAAACTCTCACACTTCCAGACCCTGAGAAAAAAGCCACCCTGAATTTACCCGGCATGCACTCTTCAGATAAGCCATGTCGGC CCAAATCTGAGTAACTTTATATAAATATCTCATGGGGTTTTATATTTTCATTTGTTGTTGTTGTTTTTTTTTAAGAATCTTCTGATAGAG AAAAAGACTGCTTTGTCACTCAAACATGTTCCTTCGACCTTTCAGTGTGCATGTGACTCAGTAACTTCACATAGAATATGATTCCCTAAG TATGCTACACAGCATCATATTAGATGTAAGATGTAAGACTTGCAAAGGACAGAAGGAATCTTCTGTAACCACATAGCTGTATGCCAGAGA GGAAGCCTTGTTATTGGGCATTTGATGAGGTTTGGCATGGACTTCAAGGATAAATGAATGAAAACTTTGCACCACTTTTGTTACAAGGTA CGGTAGAAAATAGTGAAGTCAGTTTCCTCTCATCAAATCTAAAATTCTCCAAAATACTCTCAGGCATAACATACTTAGCTGTTAAATTTT GAACTGCTAATTACTAATACTTGAATACCAATAGTTACTGAGATTCCTATTTTGTGGTTAGTCTGACTCAGGATTTGGAGCCTAATTAAC TCTAAACTTTTGAAAATTTTAATCATCAAGCTATAGAGGCTCCAAGTGCAATTAATAATAACTCATTTATACCTTCCACAGAATTTAATA AAGATTCTACTTGTTTCTGTCTTTTAATAACTTTCCCCTTTTGTGCCCTTGTGGCCTCAGAAATCCTTAAGAATTGCATGGATGAATGTG ACCATAACTGATTTTGGAATGGTTCAGTTTAGGAACCAAGAGGCCCAGGTGAGGCAACATCTTTTTTCTCTACAGGTACCAACAAACCTT GACTTGTCAGCTTCCATCATCAATTAAGATTCTCAGAATTTGCAATTAATTGAATAGAATTCATTTACTATCTGCCCACTCAAAGAAGTA CAAGGGTAGAGTAAGCTAACTGGGCTTTAACATGGTCAGAATGTCTGGTGCATGAACTATAAAAAAGAGAACTGTCTCCCATCCCCTTCC TTGTTTTACTCTTAGTAACATCCAGAATTCCCTGGAACAGATTGCCTACCACCAGACCTTAGAAAAGACTGTCATTCTCTTGCTCCTTAC TTGAAATACAAATATTGGGAATGTCACAGACATCAAGCAACTACTGTCAAGTGGGAGGAGAGAATGAGCAGAATTGCTGACTCCTATTTG TAGAGTGAAAAGGAGGAGTGATAATAGATGCCCTTCTGTCTAGCTTTCCTTTCTTCAACTAGTGGTAATGCAAGATTAGAATCAAGGTTG ACAGGAGGCAAGGTCACTCACTGAAGTGACAGAAAGACAATTCTCCTTTGCTCCAAAGAGAGAAATCTGTCACCTTTGCACCTCACTGCC TTTAAACACAGACGGGAGGGCAGGCCAAATCTCAGCATTGACTTTTGTCCTCCAAGAGAGGAAGAGAAGAAGTAATTGGGCAACTTGGAG GCCCACGCCCCAGCTAGCCTTCCTGATCGTAACCTCCAACCTCAGGAAAGGGACCTTCCCAAAACACAGATCCCAAAGGAAACAAAATAG ACCAAGGAGCATAATCTGCTTCTCTCACACAGCCTCTCTGCCAGTGGACCCTGCCTGCTTCCCTCTCAGTGCTCAGCACTCTGTGTAGTG TCTTTCAGGTTGATACACTCTCCCAAGGTGCAGGCGCTGGCCCCATGAGCCCAGCACCAAAGTTTTCTAAGTCATAGGTCAGACTGTCAA GATCATTTCTTTATCTATAGGTTGATATTTAGCTTAAAAAAAAAGAATAAACCTAGAACTCAAAGGAAACCTGTTGCAAATAGCTTAGAT CAACAGTGTATCTCTTCCCTAAGAATGATAGTATCTTAGTAAGACACCTTCTATGCATGGTATGGAAGCATGATTTTTGCTTGTGGGAAA ACCTAATATTTTATCAGACCCCTCGGACTTCTCAATCCCTCCCTCTCCACACAGTAGTACTTAATGAAAATGTTTTGCTTTAGAGAGCAA AATGCTACTTTCAGAAGACACTGAAATAGTATATGTATTTGCTTACCATTTGCAAGCTAAAATCAAGGTGGGATGGGGTCATTATTTTCA CATAGAATGTATTTATTTTGTGCAGGCTGTTAAACACATCTGGCACCTAGTTTTTCCATTAAGAGCATTGCTATTTTCCCTTTTTATAAA GTAGCTTCTGCTGTCAAGGTTAACAATTCTATATGCTTTAGGAAGCTAAGTTCTAATTTCCTTTTGTGAGTTTCATTTCTTTTATAACCA GTATGTTACCACAGACATCAGTTGCAAAGCTACGATGATAGTGTGATTCTTAGCCGAAAAAAAAGCGTGTGCTCTTAAAGTATGTTCAGT TTTTCTGTCTACATATGCTTTGTGTGAGTTAAAAAGGGGGTGGGTGGTGTAAATATTCCTTTAGCTGCTTTGCATATTTAACCCAGTCAT CAAAAGGCATAAATGACTTCAATATTTTATATATCTTGGTTTTCAAGTATCATTTCACATTCTCTATACATGACTTTGTTATTGTGGAAT ACAAGCCTGCAATGGATGTATATATACAGAACATTAATAATTCTTAGAAGGATGGAAGCCAAATGGCTGCATGATGGAAATTAGAAGAAA AAAAAAGCAGAAACTTGAATTTGCTAAGCATGTTTGGGGGGAAATAGAATCCTTAACTCAGTGCCTCTGTCTGCGATATGGAAACCTTCA ACTTTGTTCACCAAAATTGTATTATACCTGTGTATATATATATATATATATATATATAAATATAAATATAGTATAGTGAATCAGACACCA TCAGTTTTAAGTCTCTGGTAGCCAAACTTAAATAAATAATCCATAGAATATCACATACGTTCACTCCATCTTCATCTCTGAAGTTAGTGG AGACCATCAAAATGACTGTACATTTCATAACTCTGGGAAGATTTCAAATGTGAAGTGCCCCTGTGCATTTTCTTGGCCATAGCACGGCAT TCTTGCTTTAGCTGTGCTTTCCTGGGATGAGAAGATCTTGGTGTATTTAACACATAAGCTTTGTTAGAAATCACCTCTGAAGATCATTTC ATTTTCTCACTTTGGGTTGTTGCAAGACAAAGCAAAGGAAAAGGAACACAATGAAGGAGGCCGTGACATTTTTAGTTGCCACCGTTGTAA CTCAAACAATATGGGTTTGTTGGTGAACTGATTTATCAAGGCTTCTGTTACGGTTTTGCATCTGTGTGTGAGGAAAATTTTAATTTATTT GGAAGTATTTATTAGCCATGTTGTTGGTCCTGAAAATAAATCTCTAAGTAGCACAGTTGTGGGTATATTATGCAGACACTTACCACAATA CCTGCAAAAGTAACTGTGGTTTTCTTTCAAGACACTGTAATAAACAGTGAACTAAGAGAATAGATTCTGATACATCTCGATAAATCATTC TCTGCAAAAGTTTCAGGGCTAATGTATTTATGTGTATTTTTAAATTCTACTTTCTTTGGCATCTCTTCATGGCTCAGCGACAACAAAGTA ATAGGTCATTGGCTGGCTTACGTCGATAGGAATTTTACTCTTAAGAAGGGCCAGTGTATAGCTGACTCTACATATAATGTGTAATCAGAT AATCCAATAGAGAGGAATTGTCCAAATAGTTTTAGTACCTTTCTGATCATCTGACTCAGTAGGCTAGGAGACAATCTGTCATCTGAGCCA TAGTTCTTGAGATTTAAAAAGTCTGTCCAGTGACTGCAATCTGATTATGAATAAACTATTTTAACTATTCATTCTTGCTGAAACTGAAGT GTACACAATAGCACACTGTTGGCATGCTGAGGCAAAACATTGGGTTCTTTTGTGTTCTACCTTCAAAACAATCTGTTTGCATTTGAAATA TAAGTGTTTAAGCTTTTTAGGAGTTAGTGTAATAAGAGAATGTGAATATGTTGGGAAATTTTCAGATGCCATTAATAATTGTAATTTTGT TGTTAAATTAACAAGGACTTTAGGATAAGCCTCTTGATGTTTTTTGCTTTAAATTGAAAGCATGTCTGTCAAATTGCAAGTCTCCCTTCA GTTTCTATATATCACCCAGGAGAGGGTCTCTGAGTTGGTGTTGTACCTGTACCACTCACATGTAGCTCAAGTGTAATTTGTAGTGTTTAC ATTCAAGCTGGGATCTTGATTGGTTAAATTAATCCACATACCACTGCCACTGCTGAAGGACCAGGTGTTGGAATACACAGCATTACAGAC TATAAGCAAAGCAAACAAAAGTTGATCCTTACATATGCCATCCTTCTGTGTCATTTTGTGGCTGTTCTGTGTTTTTCTTCCTAGTTATTT >In-frame_ENST00000310739_ENST00000580974_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(amino acids)=261AA_start in transcript=87_stop in transcript=872 MASERPEPEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEY TCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLV -------------------------------------------------------------- >In-frame_ENST00000310739_ENST00000299954_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(transcript)=1825nt_BP=114nt GGTTCCTGCTGGGTGCCGAGGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCTCACTGGCCCGGGCCGGCGCGGGAGGGCTGTGTGATG GCCTCGGAGCGCCCGGAGCCGGAGTACAAAATTGGACAGCTGTACATGATCAGCAAACACAGCCATGAACAGAGTGACCGGGGAGAAGGG GTGGAGGTCGTCCAGAATGAGCCCTTTGAGGACCCTCACCATGGCAATGGGCAGTTCACCGAGAAGCGGGTGTATCTCAACAGCAAACTG CCTAGTTGGGCTAGAGCTGTTGTCCCCAAAATATTTTATGTGACAGAGAAGGCTTGGAACTATTATCCCTACACAATTACAGAATATAAG TGTTCCTTTCTGCCGAAATTCTCCATTCATATAGAAACCAAGTATGAGGACAACAAAGGAAGCAATGACACCATTTTCGACAATGAAGCC AAAGACGTGGAGAGAGAAGTTTGCTTTATTGATATTGCCTGCGATGAAATTCCAGAGCGCTACTACAAAGAATCTGAGGATCCTAAGCAC TTCAAGTCAGAGAAGACAGGACGGGGACAGTTGAGGGAAGGCTGGAGAGATAGTCATCAGCCTATCATGTGCTCCTACAAGCTGGTGACT GTGAAGTTTGAGGTCTGGGGGCTTCAGACCAGAGTGGAACAATTTGTACACAAGGTGGTCCGAGACATTCTGCTGATTGGACATAGACAG GCTTTTGCATGGGTTGATGAGTGGTATGATATGACAATGGATGATGTTCGGGAATACGAGAAAAACATGCATGAACAAACCAACATAAAA GTTTGCAATCAGCATTCCTCCCCTGTGGATGACATAGAGAGTCATGCCCAAACAAGTACATGACAATGGATGAAGTCCGAGAATTTGAAC GAGCCACTCAGGAAGCCACCAACAAGAAAATCGGCATTTTCCCACCTGCAATTTCTATCTCCAGCATCCCCCTGCTGCCTTCTTCCGTCC GCAGTGCGCCTTCTAGTGCTCCATCCACCCCTCTCTCCACAGACGCACCCGAATTTCTGTCCGTTCCCAAAGATCGGCCCCGGAAAAAGT CTGCCCCAGAAACTCTCACACTTCCAGACCCTGAGAAAAAAGCCACCCTGAATTTACCCGGCATGCACTCTTCAGATAAGCCATGTCGGC CCAAATCTGAGTAACTTTATATAAATATCTCATGGGGTTTTATATTTTCATTTGTTGTTGTTGTTTTTTTTTAAGAATCTTCTGATAGAG AAAAAGACTGCTTTGTCACTCAAACATGTTCCTTCGACCTTTCAGTGTGCATGTGACTCAGTAACTTCACATAGAATATGATTCCCTAAG TATGCTACACAGCATCATATTAGATGTAAGATGTAAGACTTGCAAAGGACAGAAGGAATCTTCTGTAACCACATAGCTGTATGCCAGAGA GGAAGCCTTGTTATTGGGCATTTGATGAGGTTTGGCATGGACTTCAAGGATAAATGAATGAAAACTTTGCACCACTTTTGTTACAAGGTA CGGTAGAAAATAGTGAAGTCAGTTTCCTCTCATCAAATCTAAAATTCTCCAAAATACTCTCAGGCATAACATACTTAGCTGTTAAATTTT GAACTGCTAATTACTAATACTTGAATACCAATAGTTACTGAGATTCCTATTTTGTGGTTAGTCTGACTCAGGATTTGGAGCCTAATTAAC TCTAAACTTTTGAAAATTTTAATCATCAAGCTATAGAGGCTCCAAGTGCAATTAATAATAACTCATTTATACCTTCCACAGAATTTAATA >In-frame_ENST00000310739_ENST00000299954_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(amino acids)=261AA_start in transcript=87_stop in transcript=872 MASERPEPEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEY KCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLV -------------------------------------------------------------- >In-frame_ENST00000310739_ENST00000335257_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(transcript)=1706nt_BP=114nt GGTTCCTGCTGGGTGCCGAGGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCTCACTGGCCCGGGCCGGCGCGGGAGGGCTGTGTGATG GCCTCGGAGCGCCCGGAGCCGGAGTACAAAATTGGACAGCTGTACATGATCAGCAAACACAGCCATGAACAGAGTGACCGGGGAGAAGGG GTGGAGGTCGTCCAGAATGAGCCCTTTGAGGACCCTCACCATGGCAATGGGCAGTTCACCGAGAAGCGGGTGTATCTCAACAGCAAACTG CCTAGTTGGGCTAGAGCTGTTGTCCCCAAAATATTTTATGTGACAGAGAAGGCTTGGAACTATTATCCCTACACAATTACAGAATATAAG TGTTCCTTTCTGCCGAAATTCTCCATTCATATAGAAACCAAGTATGAGGACAACAAAGGAAGCAATGACACCATTTTCGACAATGAAGCC AAAGACGTGGAGAGAGAAGTTTGCTTTATTGATATTGCCTGCGATGAAATTCCAGAGCGCTACTACAAAGAATCTGAGGATCCTAAGCAC TTCAAGTCAGAGAAGACAGGACGGGGACAGTTGAGGGAAGGCTGGAGAGATAGTCATCAGCCTATCATGTGCTCCTACAAGCTGGTGACT GTGAAGTTTGAGGTCTGGGGGCTTCAGACCAGAGTGGAACAATTTGTACACAAGGTGGTCCGAGACATTCTGCTGATTGGACATAGACAG GCTTTTGCATGGGTTGATGAGTGGTATGACATGACAATGGATGAAGTCCGAGAATTTGAACGAGCCACTCAGGAAGCCACCAACAAGAAA ATCGGCATTTTCCCACCTGCAATTTCTATCTCCAGCATCCCCCTGCTGCCTTCTTCCGTCCGCAGTGCGCCTTCTAGTGCTCCATCCACC CCTCTCTCCACAGACGCACCCGAATTTCTGTCCGTTCCCAAAGATCGGCCCCGGAAAAAGTCTGCCCCAGAAACTCTCACACTTCCAGAC CCTGAGAAAAAAGCCACCCTGAATTTACCCGGCATGCACTCTTCAGATAAGCCATGTCGGCCCAAATCTGAGTAACTTTATATAAATATC TCATGGGGTTTTATATTTTCATTTGTTGTTGTTGTTTTTTTTTAAGAATCTTCTGATAGAGAAAAAGACTGCTTTGTCACTCAAACATGT TCCTTCGACCTTTCAGTGTGCATGTGACTCAGTAACTTCACATAGAATATGATTCCCTAAGTATGCTACACAGCATCATATTAGATGTAA GATGTAAGACTTGCAAAGGACAGAAGGAATCTTCTGTAACCACATAGCTGTATGCCAGAGAGGAAGCCTTGTTATTGGGCATTTGATGAG GTTTGGCATGGACTTCAAGGATAAATGAATGAAAACTTTGCACCACTTTTGTTACAAGGTACGGTAGAAAATAGTGAAGTCAGTTTCCTC TCATCAAATCTAAAATTCTCCAAAATACTCTCAGGCATAACATACTTAGCTGTTAAATTTTGAACTGCTAATTACTAATACTTGAATACC AATAGTTACTGAGATTCCTATTTTGTGGTTAGTCTGACTCAGGATTTGGAGCCTAATTAACTCTAAACTTTTGAAAATTTTAATCATCAA >In-frame_ENST00000310739_ENST00000335257_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(amino acids)=325AA_start in transcript=87_stop in transcript=1064 MASERPEPEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEY KCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLV TVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREFERATQEATNKKIGIFPPAISISSIPLLPSSVRSAPSSAPS -------------------------------------------------------------- >In-frame_ENST00000310739_ENST00000581322_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(transcript)=1190nt_BP=114nt GGTTCCTGCTGGGTGCCGAGGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCTCACTGGCCCGGGCCGGCGCGGGAGGGCTGTGTGATG GCCTCGGAGCGCCCGGAGCCGGAGTACAAAATTGGACAGCTGTACATGATCAGCAAACACAGCCATGAACAGAGTGACCGGGGAGAAGGG GTGGAGGTCGTCCAGAATGAGCCCTTTGAGGACCCTCACCATGGCAATGGGCAGTTCACCGAGAAGCGGGTGTATCTCAACAGCAAACTG CCTAGTTGGGCTAGAGCTGTTGTCCCCAAAATATTTTATGTGACAGAGAAGGCTTGGAACTATTATCCCTACACAATTACAGAATACACA TGTTCCTTTCTGCCGAAATTCTCCATTCATATAGAAACCAAGTATGAGGACAACAAAGGAAGCAATGACACCATTTTCGACAATGAAGCC AAAGACGTGGAGAGAGAAGTTTGCTTTATTGATATTGCCTGCGATGAAATTCCAGAGCGCTACTACAAAGAATCTGAGGATCCTAAGCAC TTCAAGTCAGAGAAGACAGGACGGGGACAGTTGAGGGAAGGCTGGAGAGATAGTCATCAGCCTATCATGTGCTCCTACAAGCTGGTGACT GTGAAGTTTGAGGTCTGGGGGCTTCAGACCAGAGTGGAACAATTTGTACACAAGGTGGTCCGAGACATTCTGCTGATTGGACATAGACAG GCTTTTGCATGGGTTGATGAGTGGTATGACATGACAATGGATGAAGTCCGAGAATTTGAACGAGCCACTCAGGAAGCCACCAACAAGAAA ATCGGCATTTTCCCACCTGCAATTTCTATCTCCAGCATCCCCCTGCTGCCTTCTTCCGTCCGCAGTGCGCCTTCTAGTGCTCCATCCACC CCTCTCTCCACAGACGCACCCGAATTTCTGTCCGTTCCCAAAGATCGGCCCCGGAAAAAGTCTGCCCCAGAAACTCTCACACTTCCAGAC CCTGAGAAAAAAGCCACCCTGAATTTACCCGGCATGCACTCTTCAGATAAGCCATGTCGGCCCAAATCTGAGTAACTTTATATAAATATC TCATGGGGTTTTATATTTTCATTTGTTGTTGTTGTTTTTTTTTAAGAATCTTCTGATAGAGAAAAAGACTGCTTTGTCACTCAAACATGT >In-frame_ENST00000310739_ENST00000581322_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(amino acids)=325AA_start in transcript=87_stop in transcript=1064 MASERPEPEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEY TCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLV TVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREFERATQEATNKKIGIFPPAISISSIPLLPSSVRSAPSSAPS -------------------------------------------------------------- >In-frame_ENST00000372450_ENST00000580974_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(transcript)=5552nt_BP=114nt GGTTCCTGCTGGGTGCCGAGGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCTCACTGGCCCGGGCCGGCGCGGGAGGGCTGTGTGATG GCCTCGGAGCGCCCGGAGCCGGAGTACAAAATTGGACAGCTGTACATGATCAGCAAACACAGCCATGAACAGAGTGACCGGGGAGAAGGG GTGGAGGTCGTCCAGAATGAGCCCTTTGAGGACCCTCACCATGGCAATGGGCAGTTCACCGAGAAGCGGGTGTATCTCAACAGCAAACTG CCTAGTTGGGCTAGAGCTGTTGTCCCCAAAATATTTTATGTGACAGAGAAGGCTTGGAACTATTATCCCTACACAATTACAGAATACACA TGTTCCTTTCTGCCGAAATTCTCCATTCATATAGAAACCAAGTATGAGGACAACAAAGGAAGCAATGACACCATTTTCGACAATGAAGCC AAAGACGTGGAGAGAGAAGTTTGCTTTATTGATATTGCCTGCGATGAAATTCCAGAGCGCTACTACAAAGAATCTGAGGATCCTAAGCAC TTCAAGTCAGAGAAGACAGGACGGGGACAGTTGAGGGAAGGCTGGAGAGATAGTCATCAGCCTATCATGTGCTCCTACAAGCTGGTGACT GTGAAGTTTGAGGTCTGGGGGCTTCAGACCAGAGTGGAACAATTTGTACACAAGGTGGTCCGAGACATTCTGCTGATTGGACATAGACAG GCTTTTGCATGGGTTGATGAGTGGTATGATATGACAATGGATGATGTTCGGGAATACGAGAAAAACATGCATGAACAAACCAACATAAAA GTTTGCAATCAGCATTCCTCCCCTGTGGATGACATAGAGAGTCATGCCCAAACAAGTACATGACAATGGATGAAGTCCGAGAATTTGAAC GAGCCACTCAGGAAGCCACCAACAAGAAAATCGGCATTTTCCCACCTGCAATTTCTATCTCCAGCATCCCCCTGCTGCCTTCTTCCGTCC GCAGTGCGCCTTCTAGTGCTCCATCCACCCCTCTCTCCACAGACGCACCCGAATTTCTGTCCGTTCCCAAAGATCGGCCCCGGAAAAAGT CTGCCCCAGAAACTCTCACACTTCCAGACCCTGAGAAAAAAGCCACCCTGAATTTACCCGGCATGCACTCTTCAGATAAGCCATGTCGGC CCAAATCTGAGTAACTTTATATAAATATCTCATGGGGTTTTATATTTTCATTTGTTGTTGTTGTTTTTTTTTAAGAATCTTCTGATAGAG AAAAAGACTGCTTTGTCACTCAAACATGTTCCTTCGACCTTTCAGTGTGCATGTGACTCAGTAACTTCACATAGAATATGATTCCCTAAG TATGCTACACAGCATCATATTAGATGTAAGATGTAAGACTTGCAAAGGACAGAAGGAATCTTCTGTAACCACATAGCTGTATGCCAGAGA GGAAGCCTTGTTATTGGGCATTTGATGAGGTTTGGCATGGACTTCAAGGATAAATGAATGAAAACTTTGCACCACTTTTGTTACAAGGTA CGGTAGAAAATAGTGAAGTCAGTTTCCTCTCATCAAATCTAAAATTCTCCAAAATACTCTCAGGCATAACATACTTAGCTGTTAAATTTT GAACTGCTAATTACTAATACTTGAATACCAATAGTTACTGAGATTCCTATTTTGTGGTTAGTCTGACTCAGGATTTGGAGCCTAATTAAC TCTAAACTTTTGAAAATTTTAATCATCAAGCTATAGAGGCTCCAAGTGCAATTAATAATAACTCATTTATACCTTCCACAGAATTTAATA AAGATTCTACTTGTTTCTGTCTTTTAATAACTTTCCCCTTTTGTGCCCTTGTGGCCTCAGAAATCCTTAAGAATTGCATGGATGAATGTG ACCATAACTGATTTTGGAATGGTTCAGTTTAGGAACCAAGAGGCCCAGGTGAGGCAACATCTTTTTTCTCTACAGGTACCAACAAACCTT GACTTGTCAGCTTCCATCATCAATTAAGATTCTCAGAATTTGCAATTAATTGAATAGAATTCATTTACTATCTGCCCACTCAAAGAAGTA CAAGGGTAGAGTAAGCTAACTGGGCTTTAACATGGTCAGAATGTCTGGTGCATGAACTATAAAAAAGAGAACTGTCTCCCATCCCCTTCC TTGTTTTACTCTTAGTAACATCCAGAATTCCCTGGAACAGATTGCCTACCACCAGACCTTAGAAAAGACTGTCATTCTCTTGCTCCTTAC TTGAAATACAAATATTGGGAATGTCACAGACATCAAGCAACTACTGTCAAGTGGGAGGAGAGAATGAGCAGAATTGCTGACTCCTATTTG TAGAGTGAAAAGGAGGAGTGATAATAGATGCCCTTCTGTCTAGCTTTCCTTTCTTCAACTAGTGGTAATGCAAGATTAGAATCAAGGTTG ACAGGAGGCAAGGTCACTCACTGAAGTGACAGAAAGACAATTCTCCTTTGCTCCAAAGAGAGAAATCTGTCACCTTTGCACCTCACTGCC TTTAAACACAGACGGGAGGGCAGGCCAAATCTCAGCATTGACTTTTGTCCTCCAAGAGAGGAAGAGAAGAAGTAATTGGGCAACTTGGAG GCCCACGCCCCAGCTAGCCTTCCTGATCGTAACCTCCAACCTCAGGAAAGGGACCTTCCCAAAACACAGATCCCAAAGGAAACAAAATAG ACCAAGGAGCATAATCTGCTTCTCTCACACAGCCTCTCTGCCAGTGGACCCTGCCTGCTTCCCTCTCAGTGCTCAGCACTCTGTGTAGTG TCTTTCAGGTTGATACACTCTCCCAAGGTGCAGGCGCTGGCCCCATGAGCCCAGCACCAAAGTTTTCTAAGTCATAGGTCAGACTGTCAA GATCATTTCTTTATCTATAGGTTGATATTTAGCTTAAAAAAAAAGAATAAACCTAGAACTCAAAGGAAACCTGTTGCAAATAGCTTAGAT CAACAGTGTATCTCTTCCCTAAGAATGATAGTATCTTAGTAAGACACCTTCTATGCATGGTATGGAAGCATGATTTTTGCTTGTGGGAAA ACCTAATATTTTATCAGACCCCTCGGACTTCTCAATCCCTCCCTCTCCACACAGTAGTACTTAATGAAAATGTTTTGCTTTAGAGAGCAA AATGCTACTTTCAGAAGACACTGAAATAGTATATGTATTTGCTTACCATTTGCAAGCTAAAATCAAGGTGGGATGGGGTCATTATTTTCA CATAGAATGTATTTATTTTGTGCAGGCTGTTAAACACATCTGGCACCTAGTTTTTCCATTAAGAGCATTGCTATTTTCCCTTTTTATAAA GTAGCTTCTGCTGTCAAGGTTAACAATTCTATATGCTTTAGGAAGCTAAGTTCTAATTTCCTTTTGTGAGTTTCATTTCTTTTATAACCA GTATGTTACCACAGACATCAGTTGCAAAGCTACGATGATAGTGTGATTCTTAGCCGAAAAAAAAGCGTGTGCTCTTAAAGTATGTTCAGT TTTTCTGTCTACATATGCTTTGTGTGAGTTAAAAAGGGGGTGGGTGGTGTAAATATTCCTTTAGCTGCTTTGCATATTTAACCCAGTCAT CAAAAGGCATAAATGACTTCAATATTTTATATATCTTGGTTTTCAAGTATCATTTCACATTCTCTATACATGACTTTGTTATTGTGGAAT ACAAGCCTGCAATGGATGTATATATACAGAACATTAATAATTCTTAGAAGGATGGAAGCCAAATGGCTGCATGATGGAAATTAGAAGAAA AAAAAAGCAGAAACTTGAATTTGCTAAGCATGTTTGGGGGGAAATAGAATCCTTAACTCAGTGCCTCTGTCTGCGATATGGAAACCTTCA ACTTTGTTCACCAAAATTGTATTATACCTGTGTATATATATATATATATATATATATAAATATAAATATAGTATAGTGAATCAGACACCA TCAGTTTTAAGTCTCTGGTAGCCAAACTTAAATAAATAATCCATAGAATATCACATACGTTCACTCCATCTTCATCTCTGAAGTTAGTGG AGACCATCAAAATGACTGTACATTTCATAACTCTGGGAAGATTTCAAATGTGAAGTGCCCCTGTGCATTTTCTTGGCCATAGCACGGCAT TCTTGCTTTAGCTGTGCTTTCCTGGGATGAGAAGATCTTGGTGTATTTAACACATAAGCTTTGTTAGAAATCACCTCTGAAGATCATTTC ATTTTCTCACTTTGGGTTGTTGCAAGACAAAGCAAAGGAAAAGGAACACAATGAAGGAGGCCGTGACATTTTTAGTTGCCACCGTTGTAA CTCAAACAATATGGGTTTGTTGGTGAACTGATTTATCAAGGCTTCTGTTACGGTTTTGCATCTGTGTGTGAGGAAAATTTTAATTTATTT GGAAGTATTTATTAGCCATGTTGTTGGTCCTGAAAATAAATCTCTAAGTAGCACAGTTGTGGGTATATTATGCAGACACTTACCACAATA CCTGCAAAAGTAACTGTGGTTTTCTTTCAAGACACTGTAATAAACAGTGAACTAAGAGAATAGATTCTGATACATCTCGATAAATCATTC TCTGCAAAAGTTTCAGGGCTAATGTATTTATGTGTATTTTTAAATTCTACTTTCTTTGGCATCTCTTCATGGCTCAGCGACAACAAAGTA ATAGGTCATTGGCTGGCTTACGTCGATAGGAATTTTACTCTTAAGAAGGGCCAGTGTATAGCTGACTCTACATATAATGTGTAATCAGAT AATCCAATAGAGAGGAATTGTCCAAATAGTTTTAGTACCTTTCTGATCATCTGACTCAGTAGGCTAGGAGACAATCTGTCATCTGAGCCA TAGTTCTTGAGATTTAAAAAGTCTGTCCAGTGACTGCAATCTGATTATGAATAAACTATTTTAACTATTCATTCTTGCTGAAACTGAAGT GTACACAATAGCACACTGTTGGCATGCTGAGGCAAAACATTGGGTTCTTTTGTGTTCTACCTTCAAAACAATCTGTTTGCATTTGAAATA TAAGTGTTTAAGCTTTTTAGGAGTTAGTGTAATAAGAGAATGTGAATATGTTGGGAAATTTTCAGATGCCATTAATAATTGTAATTTTGT TGTTAAATTAACAAGGACTTTAGGATAAGCCTCTTGATGTTTTTTGCTTTAAATTGAAAGCATGTCTGTCAAATTGCAAGTCTCCCTTCA GTTTCTATATATCACCCAGGAGAGGGTCTCTGAGTTGGTGTTGTACCTGTACCACTCACATGTAGCTCAAGTGTAATTTGTAGTGTTTAC ATTCAAGCTGGGATCTTGATTGGTTAAATTAATCCACATACCACTGCCACTGCTGAAGGACCAGGTGTTGGAATACACAGCATTACAGAC TATAAGCAAAGCAAACAAAAGTTGATCCTTACATATGCCATCCTTCTGTGTCATTTTGTGGCTGTTCTGTGTTTTTCTTCCTAGTTATTT >In-frame_ENST00000372450_ENST00000580974_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(amino acids)=261AA_start in transcript=87_stop in transcript=872 MASERPEPEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEY TCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLV -------------------------------------------------------------- >In-frame_ENST00000372450_ENST00000299954_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(transcript)=1825nt_BP=114nt GGTTCCTGCTGGGTGCCGAGGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCTCACTGGCCCGGGCCGGCGCGGGAGGGCTGTGTGATG GCCTCGGAGCGCCCGGAGCCGGAGTACAAAATTGGACAGCTGTACATGATCAGCAAACACAGCCATGAACAGAGTGACCGGGGAGAAGGG GTGGAGGTCGTCCAGAATGAGCCCTTTGAGGACCCTCACCATGGCAATGGGCAGTTCACCGAGAAGCGGGTGTATCTCAACAGCAAACTG CCTAGTTGGGCTAGAGCTGTTGTCCCCAAAATATTTTATGTGACAGAGAAGGCTTGGAACTATTATCCCTACACAATTACAGAATATAAG TGTTCCTTTCTGCCGAAATTCTCCATTCATATAGAAACCAAGTATGAGGACAACAAAGGAAGCAATGACACCATTTTCGACAATGAAGCC AAAGACGTGGAGAGAGAAGTTTGCTTTATTGATATTGCCTGCGATGAAATTCCAGAGCGCTACTACAAAGAATCTGAGGATCCTAAGCAC TTCAAGTCAGAGAAGACAGGACGGGGACAGTTGAGGGAAGGCTGGAGAGATAGTCATCAGCCTATCATGTGCTCCTACAAGCTGGTGACT GTGAAGTTTGAGGTCTGGGGGCTTCAGACCAGAGTGGAACAATTTGTACACAAGGTGGTCCGAGACATTCTGCTGATTGGACATAGACAG GCTTTTGCATGGGTTGATGAGTGGTATGATATGACAATGGATGATGTTCGGGAATACGAGAAAAACATGCATGAACAAACCAACATAAAA GTTTGCAATCAGCATTCCTCCCCTGTGGATGACATAGAGAGTCATGCCCAAACAAGTACATGACAATGGATGAAGTCCGAGAATTTGAAC GAGCCACTCAGGAAGCCACCAACAAGAAAATCGGCATTTTCCCACCTGCAATTTCTATCTCCAGCATCCCCCTGCTGCCTTCTTCCGTCC GCAGTGCGCCTTCTAGTGCTCCATCCACCCCTCTCTCCACAGACGCACCCGAATTTCTGTCCGTTCCCAAAGATCGGCCCCGGAAAAAGT CTGCCCCAGAAACTCTCACACTTCCAGACCCTGAGAAAAAAGCCACCCTGAATTTACCCGGCATGCACTCTTCAGATAAGCCATGTCGGC CCAAATCTGAGTAACTTTATATAAATATCTCATGGGGTTTTATATTTTCATTTGTTGTTGTTGTTTTTTTTTAAGAATCTTCTGATAGAG AAAAAGACTGCTTTGTCACTCAAACATGTTCCTTCGACCTTTCAGTGTGCATGTGACTCAGTAACTTCACATAGAATATGATTCCCTAAG TATGCTACACAGCATCATATTAGATGTAAGATGTAAGACTTGCAAAGGACAGAAGGAATCTTCTGTAACCACATAGCTGTATGCCAGAGA GGAAGCCTTGTTATTGGGCATTTGATGAGGTTTGGCATGGACTTCAAGGATAAATGAATGAAAACTTTGCACCACTTTTGTTACAAGGTA CGGTAGAAAATAGTGAAGTCAGTTTCCTCTCATCAAATCTAAAATTCTCCAAAATACTCTCAGGCATAACATACTTAGCTGTTAAATTTT GAACTGCTAATTACTAATACTTGAATACCAATAGTTACTGAGATTCCTATTTTGTGGTTAGTCTGACTCAGGATTTGGAGCCTAATTAAC TCTAAACTTTTGAAAATTTTAATCATCAAGCTATAGAGGCTCCAAGTGCAATTAATAATAACTCATTTATACCTTCCACAGAATTTAATA >In-frame_ENST00000372450_ENST00000299954_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(amino acids)=261AA_start in transcript=87_stop in transcript=872 MASERPEPEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEY KCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLV -------------------------------------------------------------- >In-frame_ENST00000372450_ENST00000335257_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(transcript)=1706nt_BP=114nt GGTTCCTGCTGGGTGCCGAGGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCTCACTGGCCCGGGCCGGCGCGGGAGGGCTGTGTGATG GCCTCGGAGCGCCCGGAGCCGGAGTACAAAATTGGACAGCTGTACATGATCAGCAAACACAGCCATGAACAGAGTGACCGGGGAGAAGGG GTGGAGGTCGTCCAGAATGAGCCCTTTGAGGACCCTCACCATGGCAATGGGCAGTTCACCGAGAAGCGGGTGTATCTCAACAGCAAACTG CCTAGTTGGGCTAGAGCTGTTGTCCCCAAAATATTTTATGTGACAGAGAAGGCTTGGAACTATTATCCCTACACAATTACAGAATATAAG TGTTCCTTTCTGCCGAAATTCTCCATTCATATAGAAACCAAGTATGAGGACAACAAAGGAAGCAATGACACCATTTTCGACAATGAAGCC AAAGACGTGGAGAGAGAAGTTTGCTTTATTGATATTGCCTGCGATGAAATTCCAGAGCGCTACTACAAAGAATCTGAGGATCCTAAGCAC TTCAAGTCAGAGAAGACAGGACGGGGACAGTTGAGGGAAGGCTGGAGAGATAGTCATCAGCCTATCATGTGCTCCTACAAGCTGGTGACT GTGAAGTTTGAGGTCTGGGGGCTTCAGACCAGAGTGGAACAATTTGTACACAAGGTGGTCCGAGACATTCTGCTGATTGGACATAGACAG GCTTTTGCATGGGTTGATGAGTGGTATGACATGACAATGGATGAAGTCCGAGAATTTGAACGAGCCACTCAGGAAGCCACCAACAAGAAA ATCGGCATTTTCCCACCTGCAATTTCTATCTCCAGCATCCCCCTGCTGCCTTCTTCCGTCCGCAGTGCGCCTTCTAGTGCTCCATCCACC CCTCTCTCCACAGACGCACCCGAATTTCTGTCCGTTCCCAAAGATCGGCCCCGGAAAAAGTCTGCCCCAGAAACTCTCACACTTCCAGAC CCTGAGAAAAAAGCCACCCTGAATTTACCCGGCATGCACTCTTCAGATAAGCCATGTCGGCCCAAATCTGAGTAACTTTATATAAATATC TCATGGGGTTTTATATTTTCATTTGTTGTTGTTGTTTTTTTTTAAGAATCTTCTGATAGAGAAAAAGACTGCTTTGTCACTCAAACATGT TCCTTCGACCTTTCAGTGTGCATGTGACTCAGTAACTTCACATAGAATATGATTCCCTAAGTATGCTACACAGCATCATATTAGATGTAA GATGTAAGACTTGCAAAGGACAGAAGGAATCTTCTGTAACCACATAGCTGTATGCCAGAGAGGAAGCCTTGTTATTGGGCATTTGATGAG GTTTGGCATGGACTTCAAGGATAAATGAATGAAAACTTTGCACCACTTTTGTTACAAGGTACGGTAGAAAATAGTGAAGTCAGTTTCCTC TCATCAAATCTAAAATTCTCCAAAATACTCTCAGGCATAACATACTTAGCTGTTAAATTTTGAACTGCTAATTACTAATACTTGAATACC AATAGTTACTGAGATTCCTATTTTGTGGTTAGTCTGACTCAGGATTTGGAGCCTAATTAACTCTAAACTTTTGAAAATTTTAATCATCAA >In-frame_ENST00000372450_ENST00000335257_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(amino acids)=325AA_start in transcript=87_stop in transcript=1064 MASERPEPEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEY KCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLV TVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREFERATQEATNKKIGIFPPAISISSIPLLPSSVRSAPSSAPS -------------------------------------------------------------- >In-frame_ENST00000372450_ENST00000581322_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(transcript)=1190nt_BP=114nt GGTTCCTGCTGGGTGCCGAGGTAGCGAGGTCAGGGGTCAAGAGTGGAACACCCTCACTGGCCCGGGCCGGCGCGGGAGGGCTGTGTGATG GCCTCGGAGCGCCCGGAGCCGGAGTACAAAATTGGACAGCTGTACATGATCAGCAAACACAGCCATGAACAGAGTGACCGGGGAGAAGGG GTGGAGGTCGTCCAGAATGAGCCCTTTGAGGACCCTCACCATGGCAATGGGCAGTTCACCGAGAAGCGGGTGTATCTCAACAGCAAACTG CCTAGTTGGGCTAGAGCTGTTGTCCCCAAAATATTTTATGTGACAGAGAAGGCTTGGAACTATTATCCCTACACAATTACAGAATACACA TGTTCCTTTCTGCCGAAATTCTCCATTCATATAGAAACCAAGTATGAGGACAACAAAGGAAGCAATGACACCATTTTCGACAATGAAGCC AAAGACGTGGAGAGAGAAGTTTGCTTTATTGATATTGCCTGCGATGAAATTCCAGAGCGCTACTACAAAGAATCTGAGGATCCTAAGCAC TTCAAGTCAGAGAAGACAGGACGGGGACAGTTGAGGGAAGGCTGGAGAGATAGTCATCAGCCTATCATGTGCTCCTACAAGCTGGTGACT GTGAAGTTTGAGGTCTGGGGGCTTCAGACCAGAGTGGAACAATTTGTACACAAGGTGGTCCGAGACATTCTGCTGATTGGACATAGACAG GCTTTTGCATGGGTTGATGAGTGGTATGACATGACAATGGATGAAGTCCGAGAATTTGAACGAGCCACTCAGGAAGCCACCAACAAGAAA ATCGGCATTTTCCCACCTGCAATTTCTATCTCCAGCATCCCCCTGCTGCCTTCTTCCGTCCGCAGTGCGCCTTCTAGTGCTCCATCCACC CCTCTCTCCACAGACGCACCCGAATTTCTGTCCGTTCCCAAAGATCGGCCCCGGAAAAAGTCTGCCCCAGAAACTCTCACACTTCCAGAC CCTGAGAAAAAAGCCACCCTGAATTTACCCGGCATGCACTCTTCAGATAAGCCATGTCGGCCCAAATCTGAGTAACTTTATATAAATATC TCATGGGGTTTTATATTTTCATTTGTTGTTGTTGTTTTTTTTTAAGAATCTTCTGATAGAGAAAAAGACTGCTTTGTCACTCAAACATGT >In-frame_ENST00000372450_ENST00000581322_ERR188030_SZT2_chr1_43855666_+_PITPNC1_chr17_65528918_length(amino acids)=325AA_start in transcript=87_stop in transcript=1064 MASERPEPEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEY TCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLV TVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREFERATQEATNKKIGIFPPAISISSIPLLPSSVRSAPSSAPS -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for SZT2-PITPNC1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for SZT2-PITPNC1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for SZT2-PITPNC1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | SZT2 | C3809624 | EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 18 | 2 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | SZT2 | C0424605 | Developmental delay (disorder) | 1 | GENOMICS_ENGLAND |
Hgene | SZT2 | C0557874 | Global developmental delay | 1 | GENOMICS_ENGLAND |