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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:TCF12-BPGM (FusionGDB2 ID:89076) |
Fusion Gene Summary for TCF12-BPGM |
Fusion gene summary |
Fusion gene information | Fusion gene name: TCF12-BPGM | Fusion gene ID: 89076 | Hgene | Tgene | Gene symbol | TCF12 | BPGM | Gene ID | 6938 | 669 |
Gene name | transcription factor 12 | bisphosphoglycerate mutase | |
Synonyms | CRS3|HEB|HTF4|HsT17266|TCF-12|bHLHb20|p64 | DPGM|ECYT8 | |
Cytomap | 15q21.3 | 7q33 | |
Type of gene | protein-coding | protein-coding | |
Description | transcription factor 12DNA-binding protein HTF4E-box-binding proteinclass B basic helix-loop-helix protein 20helix-loop-helix transcription factor 4transcription factor HTF-4 | bisphosphoglycerate mutase2,3-bisphosphoglycerate mutase, erythrocyte2,3-bisphosphoglycerate synthase2,3-diphosphoglycerate mutaseBPG-dependent PGAMerythrocyte 2,3-bisphosphoglycerate mutasetestis secretory sperm-binding protein Li 202a | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | P07738 | |
Ensembl transtripts involved in fusion gene | ENST00000438423, ENST00000267811, ENST00000452095, ENST00000333725, ENST00000557843, ENST00000560764, ENST00000543579, ENST00000537840, ENST00000343827, ENST00000559710, ENST00000559703, | ENST00000344924, ENST00000418040, ENST00000393132, | |
Fusion gene scores | * DoF score | 29 X 19 X 12=6612 | 3 X 3 X 2=18 |
# samples | 32 | 3 | |
** MAII score | log2(32/6612*10)=-4.36894291440495 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: TCF12 [Title/Abstract] AND BPGM [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | TCF12(57213296)-BPGM(134363604), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | TCF12-BPGM seems lost the major protein functional domain in Hgene partner, which is a transcription factor due to the frame-shifted ORF. TCF12-BPGM seems lost the major protein functional domain in Hgene partner, which is a CGC due to the frame-shifted ORF. TCF12-BPGM seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | TCF12 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 11802795 |
Fusion gene breakpoints across TCF12 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across BPGM (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-E2-A1IJ | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
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Fusion Gene ORF analysis for TCF12-BPGM |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000438423 | ENST00000344924 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
Frame-shift | ENST00000438423 | ENST00000418040 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
In-frame | ENST00000438423 | ENST00000393132 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
In-frame | ENST00000267811 | ENST00000344924 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
Frame-shift | ENST00000267811 | ENST00000418040 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
In-frame | ENST00000267811 | ENST00000393132 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
In-frame | ENST00000452095 | ENST00000344924 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
Frame-shift | ENST00000452095 | ENST00000418040 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
In-frame | ENST00000452095 | ENST00000393132 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
In-frame | ENST00000333725 | ENST00000344924 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
Frame-shift | ENST00000333725 | ENST00000418040 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
In-frame | ENST00000333725 | ENST00000393132 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
In-frame | ENST00000557843 | ENST00000344924 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
Frame-shift | ENST00000557843 | ENST00000418040 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
In-frame | ENST00000557843 | ENST00000393132 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000560764 | ENST00000344924 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000560764 | ENST00000418040 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000560764 | ENST00000393132 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000543579 | ENST00000344924 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000543579 | ENST00000418040 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000543579 | ENST00000393132 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000537840 | ENST00000344924 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000537840 | ENST00000418040 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000537840 | ENST00000393132 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000343827 | ENST00000344924 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000343827 | ENST00000418040 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000343827 | ENST00000393132 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000559710 | ENST00000344924 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000559710 | ENST00000418040 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000559710 | ENST00000393132 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000559703 | ENST00000344924 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000559703 | ENST00000418040 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
intron-3CDS | ENST00000559703 | ENST00000393132 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000438423 | TCF12 | chr15 | 57213296 | + | ENST00000344924 | BPGM | chr7 | 134363604 | + | 1405 | 444 | 260 | 622 | 120 |
ENST00000438423 | TCF12 | chr15 | 57213296 | + | ENST00000393132 | BPGM | chr7 | 134363604 | + | 1405 | 444 | 260 | 622 | 120 |
ENST00000267811 | TCF12 | chr15 | 57213296 | + | ENST00000344924 | BPGM | chr7 | 134363604 | + | 1413 | 452 | 304 | 630 | 108 |
ENST00000267811 | TCF12 | chr15 | 57213296 | + | ENST00000393132 | BPGM | chr7 | 134363604 | + | 1413 | 452 | 304 | 630 | 108 |
ENST00000452095 | TCF12 | chr15 | 57213296 | + | ENST00000344924 | BPGM | chr7 | 134363604 | + | 1403 | 442 | 294 | 620 | 108 |
ENST00000452095 | TCF12 | chr15 | 57213296 | + | ENST00000393132 | BPGM | chr7 | 134363604 | + | 1403 | 442 | 294 | 620 | 108 |
ENST00000333725 | TCF12 | chr15 | 57213296 | + | ENST00000344924 | BPGM | chr7 | 134363604 | + | 1344 | 383 | 235 | 561 | 108 |
ENST00000333725 | TCF12 | chr15 | 57213296 | + | ENST00000393132 | BPGM | chr7 | 134363604 | + | 1344 | 383 | 235 | 561 | 108 |
ENST00000557843 | TCF12 | chr15 | 57213296 | + | ENST00000344924 | BPGM | chr7 | 134363604 | + | 1196 | 235 | 51 | 413 | 120 |
ENST00000557843 | TCF12 | chr15 | 57213296 | + | ENST00000393132 | BPGM | chr7 | 134363604 | + | 1196 | 235 | 51 | 413 | 120 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000438423 | ENST00000344924 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + | 0.025319953 | 0.97468 |
ENST00000438423 | ENST00000393132 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + | 0.025319953 | 0.97468 |
ENST00000267811 | ENST00000344924 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + | 0.027527565 | 0.9724725 |
ENST00000267811 | ENST00000393132 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + | 0.027527565 | 0.9724725 |
ENST00000452095 | ENST00000344924 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + | 0.03613742 | 0.9638626 |
ENST00000452095 | ENST00000393132 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + | 0.03613742 | 0.9638626 |
ENST00000333725 | ENST00000344924 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + | 0.019375179 | 0.98062485 |
ENST00000333725 | ENST00000393132 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + | 0.019375179 | 0.98062485 |
ENST00000557843 | ENST00000344924 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + | 0.02463598 | 0.9753641 |
ENST00000557843 | ENST00000393132 | TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + | 0.02463598 | 0.9753641 |
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Fusion Genomic Features for TCF12-BPGM |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + | 2.60E-05 | 0.999974 |
TCF12 | chr15 | 57213296 | + | BPGM | chr7 | 134363604 | + | 2.60E-05 | 0.999974 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for TCF12-BPGM |
Go to FGviewer for the breakpoints of chr15:57213296-chr7:134363604 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | BPGM |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Plays a major role in regulating hemoglobin oxygen affinity by controlling the levels of its allosteric effector 2,3-bisphosphoglycerate (2,3-BPG). Also exhibits mutase (EC 5.4.2.11) activity. {ECO:0000269|PubMed:21045285}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000267811 | + | 3 | 20 | 19_27 | 49.333333333333336 | 1821.3333333333333 | Motif | Note=9aaTAD |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000333725 | + | 3 | 21 | 19_27 | 49.333333333333336 | 1420.0 | Motif | Note=9aaTAD |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000438423 | + | 3 | 21 | 19_27 | 49.333333333333336 | 1398.3333333333333 | Motif | Note=9aaTAD |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000557843 | + | 3 | 20 | 19_27 | 49.333333333333336 | 1301.0 | Motif | Note=9aaTAD |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000267811 | + | 3 | 20 | 577_630 | 49.333333333333336 | 1821.3333333333333 | Domain | bHLH |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000333725 | + | 3 | 21 | 577_630 | 49.333333333333336 | 1420.0 | Domain | bHLH |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000343827 | + | 1 | 13 | 577_630 | 0 | 1254.6666666666667 | Domain | bHLH |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000438423 | + | 3 | 21 | 577_630 | 49.333333333333336 | 1398.3333333333333 | Domain | bHLH |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000557843 | + | 3 | 20 | 577_630 | 49.333333333333336 | 1301.0 | Domain | bHLH |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000343827 | + | 1 | 13 | 19_27 | 0 | 1254.6666666666667 | Motif | Note=9aaTAD |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000267811 | + | 3 | 20 | 119_140 | 49.333333333333336 | 1821.3333333333333 | Region | Note=Leucine-zipper |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000267811 | + | 3 | 20 | 632_655 | 49.333333333333336 | 1821.3333333333333 | Region | Note=Class A specific domain |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000333725 | + | 3 | 21 | 119_140 | 49.333333333333336 | 1420.0 | Region | Note=Leucine-zipper |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000333725 | + | 3 | 21 | 632_655 | 49.333333333333336 | 1420.0 | Region | Note=Class A specific domain |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000343827 | + | 1 | 13 | 119_140 | 0 | 1254.6666666666667 | Region | Note=Leucine-zipper |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000343827 | + | 1 | 13 | 632_655 | 0 | 1254.6666666666667 | Region | Note=Class A specific domain |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000438423 | + | 3 | 21 | 119_140 | 49.333333333333336 | 1398.3333333333333 | Region | Note=Leucine-zipper |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000438423 | + | 3 | 21 | 632_655 | 49.333333333333336 | 1398.3333333333333 | Region | Note=Class A specific domain |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000557843 | + | 3 | 20 | 119_140 | 49.333333333333336 | 1301.0 | Region | Note=Leucine-zipper |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000557843 | + | 3 | 20 | 632_655 | 49.333333333333336 | 1301.0 | Region | Note=Class A specific domain |
Tgene | BPGM | chr15:57213296 | chr7:134363604 | ENST00000344924 | 1 | 3 | 10_17 | 200.33333333333334 | 260.0 | Region | Substrate binding | |
Tgene | BPGM | chr15:57213296 | chr7:134363604 | ENST00000344924 | 1 | 3 | 116_117 | 200.33333333333334 | 260.0 | Region | Substrate binding | |
Tgene | BPGM | chr15:57213296 | chr7:134363604 | ENST00000344924 | 1 | 3 | 189_190 | 200.33333333333334 | 260.0 | Region | Substrate binding | |
Tgene | BPGM | chr15:57213296 | chr7:134363604 | ENST00000344924 | 1 | 3 | 23_24 | 200.33333333333334 | 260.0 | Region | Substrate binding | |
Tgene | BPGM | chr15:57213296 | chr7:134363604 | ENST00000344924 | 1 | 3 | 89_92 | 200.33333333333334 | 260.0 | Region | Substrate binding | |
Tgene | BPGM | chr15:57213296 | chr7:134363604 | ENST00000393132 | 2 | 4 | 10_17 | 200.33333333333334 | 260.0 | Region | Substrate binding | |
Tgene | BPGM | chr15:57213296 | chr7:134363604 | ENST00000393132 | 2 | 4 | 116_117 | 200.33333333333334 | 260.0 | Region | Substrate binding | |
Tgene | BPGM | chr15:57213296 | chr7:134363604 | ENST00000393132 | 2 | 4 | 189_190 | 200.33333333333334 | 260.0 | Region | Substrate binding | |
Tgene | BPGM | chr15:57213296 | chr7:134363604 | ENST00000393132 | 2 | 4 | 23_24 | 200.33333333333334 | 260.0 | Region | Substrate binding | |
Tgene | BPGM | chr15:57213296 | chr7:134363604 | ENST00000393132 | 2 | 4 | 89_92 | 200.33333333333334 | 260.0 | Region | Substrate binding | |
Tgene | BPGM | chr15:57213296 | chr7:134363604 | ENST00000418040 | 2 | 4 | 10_17 | 200.33333333333334 | 260.0 | Region | Substrate binding | |
Tgene | BPGM | chr15:57213296 | chr7:134363604 | ENST00000418040 | 2 | 4 | 116_117 | 200.33333333333334 | 260.0 | Region | Substrate binding | |
Tgene | BPGM | chr15:57213296 | chr7:134363604 | ENST00000418040 | 2 | 4 | 189_190 | 200.33333333333334 | 260.0 | Region | Substrate binding | |
Tgene | BPGM | chr15:57213296 | chr7:134363604 | ENST00000418040 | 2 | 4 | 23_24 | 200.33333333333334 | 260.0 | Region | Substrate binding | |
Tgene | BPGM | chr15:57213296 | chr7:134363604 | ENST00000418040 | 2 | 4 | 89_92 | 200.33333333333334 | 260.0 | Region | Substrate binding |
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Fusion Gene Sequence for TCF12-BPGM |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000438423_ENST00000344924_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(transcript)=1405nt_BP=444nt GGCGCGGAGGGATCCGGAGGCGAGCCGAGCGCGGTGGTGAGGCCGCCTCAGCGAAAAAAATGTCCGCCTGAAGAGACCCACAAGTTCTAT TCGGGGGGACCGACAGCCCGCCCCGGGAGGAAGGGGCGGCCAGGCCCGAAAGCCGCCTCCCCCTCCCAGACCCGAGAGCTCGTGCGGGGC AAAGTGAACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCGGGGTGGTTGGATGCGG AGACGGGGCGGCAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTGAGCGACCTACTGG ACTTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGGAAAACTAGACCAACTACACTGGGAAGCAGTCAATTCAGTGGATCAGGTATCT CAGATGAAGACATCATCAACATTACTCTTCCTACTGGAGTCCCCATTCTTCTGGAATTGGATGAAAACCTGCGTGCTGTTGGGCCTCATC AGTTCCTGGGTGACCAAGAGGCGATCCAAGCAGCCATTAAGAAAGTAGAAGATCAAGGAAAAGTGAAACAAGCTAAAAAATAGTCTTTCT CAACTGTTGGCTAAGAAGAAATGCAAAAGAAGTGGCATAGGAGTGTGTTATGGGTGCTGAACTCTCTCTCTTTTTCCCCGATTTTCCAGA GCTAGGCTGTGGAGTAGAGTTTGTATAGGTAACTAGGTAACTTATTGTGGCCCAGATAAGGCTTTAGGATGCCTCAGTGCTTATGTCATA GCCTTATGAGTTAGCTTTCTTGCTAGCCCCCTAGTCGGTCACCAAACTAGTAACTAGTGGGGCTTAATGAAGGTCATAAGTTTCTGAGAT GGGAGAGCAACAAGTAGAGATGAAGTTAAAGGTATTTATCATTCAAGAAATCATTATTGAGTCACCATTGACAGGCACTATTCTAATCAG TAGTTCACTTTAATATTTAATAAGATTTTCTGGGATAACAGTAAGGGATATTAGATAATATACCGTATGTATTTATTACTAGTCTTTTCC TCTAGGAAAAGGGATACTTTGATAATTAAGGCCAGAGGCCCATTAGTTGAGAAAGTCACAGATATATTTCTCCAAGAAAGCCAACAACCA CCACCACAATGACAGAAATGACAACAAGGCCCTTTAACTTGTCTTCTAGTTTAGAGACATCCTTCATTTGACATTTAGTAGAATTCCTCT TTGGCCACAAGAATAAGCAGCAAATAAACAACTATGGCTGTTGAGGTTCTCATTTTGGTTTGTTTTAATTTTTTGAACTTTGGGTACCTG >In-frame_ENST00000438423_ENST00000344924_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(amino acids)=120AA_start in transcript=260_stop in transcript=622 MDAETGRQKWPKMNPQQQRMAAIGTDKELSDLLDFSAMFSPPVNSGKTRPTTLGSSQFSGSGISDEDIINITLPTGVPILLELDENLRAV -------------------------------------------------------------- >In-frame_ENST00000438423_ENST00000393132_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(transcript)=1405nt_BP=444nt GGCGCGGAGGGATCCGGAGGCGAGCCGAGCGCGGTGGTGAGGCCGCCTCAGCGAAAAAAATGTCCGCCTGAAGAGACCCACAAGTTCTAT TCGGGGGGACCGACAGCCCGCCCCGGGAGGAAGGGGCGGCCAGGCCCGAAAGCCGCCTCCCCCTCCCAGACCCGAGAGCTCGTGCGGGGC AAAGTGAACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCGGGGTGGTTGGATGCGG AGACGGGGCGGCAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTGAGCGACCTACTGG ACTTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGGAAAACTAGACCAACTACACTGGGAAGCAGTCAATTCAGTGGATCAGGTATCT CAGATGAAGACATCATCAACATTACTCTTCCTACTGGAGTCCCCATTCTTCTGGAATTGGATGAAAACCTGCGTGCTGTTGGGCCTCATC AGTTCCTGGGTGACCAAGAGGCGATCCAAGCAGCCATTAAGAAAGTAGAAGATCAAGGAAAAGTGAAACAAGCTAAAAAATAGTCTTTCT CAACTGTTGGCTAAGAAGAAATGCAAAAGAAGTGGCATAGGAGTGTGTTATGGGTGCTGAACTCTCTCTCTTTTTCCCCGATTTTCCAGA GCTAGGCTGTGGAGTAGAGTTTGTATAGGTAACTAGGTAACTTATTGTGGCCCAGATAAGGCTTTAGGATGCCTCAGTGCTTATGTCATA GCCTTATGAGTTAGCTTTCTTGCTAGCCCCCTAGTCGGTCACCAAACTAGTAACTAGTGGGGCTTAATGAAGGTCATAAGTTTCTGAGAT GGGAGAGCAACAAGTAGAGATGAAGTTAAAGGTATTTATCATTCAAGAAATCATTATTGAGTCACCATTGACAGGCACTATTCTAATCAG TAGTTCACTTTAATATTTAATAAGATTTTCTGGGATAACAGTAAGGGATATTAGATAATATACCGTATGTATTTATTACTAGTCTTTTCC TCTAGGAAAAGGGATACTTTGATAATTAAGGCCAGAGGCCCATTAGTTGAGAAAGTCACAGATATATTTCTCCAAGAAAGCCAACAACCA CCACCACAATGACAGAAATGACAACAAGGCCCTTTAACTTGTCTTCTAGTTTAGAGACATCCTTCATTTGACATTTAGTAGAATTCCTCT TTGGCCACAAGAATAAGCAGCAAATAAACAACTATGGCTGTTGAGGTTCTCATTTTGGTTTGTTTTAATTTTTTGAACTTTGGGTACCTG >In-frame_ENST00000438423_ENST00000393132_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(amino acids)=120AA_start in transcript=260_stop in transcript=622 MDAETGRQKWPKMNPQQQRMAAIGTDKELSDLLDFSAMFSPPVNSGKTRPTTLGSSQFSGSGISDEDIINITLPTGVPILLELDENLRAV -------------------------------------------------------------- >In-frame_ENST00000267811_ENST00000344924_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(transcript)=1413nt_BP=452nt CGCGGAGGGATCCGGAGGCGAGCCGAGCGCGGTGGTGAGGCCGCCTCAGCGAAAAAAATGTCCGCCTGAAGAGACCCACAAGTTCTATTC GGGGGGACCGACAGCCCGCCCCGGGAGGAAGGGGCGGCCAGGCCCGAAAGCCGCCTCCCCCTCCCAGACCCGAGAGCTCGTGCGGGGCAA AGTGAACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCGGGGTGGTTGGATGCGGAG ACGGGGCGGCAGGACCTGCTAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTGAGCGA CCTACTGGACTTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGGAAAACTAGACCAACTACACTGGGAAGCAGTCAATTCAGTGGATC AGGTATCTCAGATGAAGACATCATCAACATTACTCTTCCTACTGGAGTCCCCATTCTTCTGGAATTGGATGAAAACCTGCGTGCTGTTGG GCCTCATCAGTTCCTGGGTGACCAAGAGGCGATCCAAGCAGCCATTAAGAAAGTAGAAGATCAAGGAAAAGTGAAACAAGCTAAAAAATA GTCTTTCTCAACTGTTGGCTAAGAAGAAATGCAAAAGAAGTGGCATAGGAGTGTGTTATGGGTGCTGAACTCTCTCTCTTTTTCCCCGAT TTTCCAGAGCTAGGCTGTGGAGTAGAGTTTGTATAGGTAACTAGGTAACTTATTGTGGCCCAGATAAGGCTTTAGGATGCCTCAGTGCTT ATGTCATAGCCTTATGAGTTAGCTTTCTTGCTAGCCCCCTAGTCGGTCACCAAACTAGTAACTAGTGGGGCTTAATGAAGGTCATAAGTT TCTGAGATGGGAGAGCAACAAGTAGAGATGAAGTTAAAGGTATTTATCATTCAAGAAATCATTATTGAGTCACCATTGACAGGCACTATT CTAATCAGTAGTTCACTTTAATATTTAATAAGATTTTCTGGGATAACAGTAAGGGATATTAGATAATATACCGTATGTATTTATTACTAG TCTTTTCCTCTAGGAAAAGGGATACTTTGATAATTAAGGCCAGAGGCCCATTAGTTGAGAAAGTCACAGATATATTTCTCCAAGAAAGCC AACAACCACCACCACAATGACAGAAATGACAACAAGGCCCTTTAACTTGTCTTCTAGTTTAGAGACATCCTTCATTTGACATTTAGTAGA ATTCCTCTTTGGCCACAAGAATAAGCAGCAAATAAACAACTATGGCTGTTGAGGTTCTCATTTTGGTTTGTTTTAATTTTTTGAACTTTG >In-frame_ENST00000267811_ENST00000344924_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(amino acids)=108AA_start in transcript=304_stop in transcript=630 MNPQQQRMAAIGTDKELSDLLDFSAMFSPPVNSGKTRPTTLGSSQFSGSGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEAI -------------------------------------------------------------- >In-frame_ENST00000267811_ENST00000393132_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(transcript)=1413nt_BP=452nt CGCGGAGGGATCCGGAGGCGAGCCGAGCGCGGTGGTGAGGCCGCCTCAGCGAAAAAAATGTCCGCCTGAAGAGACCCACAAGTTCTATTC GGGGGGACCGACAGCCCGCCCCGGGAGGAAGGGGCGGCCAGGCCCGAAAGCCGCCTCCCCCTCCCAGACCCGAGAGCTCGTGCGGGGCAA AGTGAACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCGGGGTGGTTGGATGCGGAG ACGGGGCGGCAGGACCTGCTAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTGAGCGA CCTACTGGACTTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGGAAAACTAGACCAACTACACTGGGAAGCAGTCAATTCAGTGGATC AGGTATCTCAGATGAAGACATCATCAACATTACTCTTCCTACTGGAGTCCCCATTCTTCTGGAATTGGATGAAAACCTGCGTGCTGTTGG GCCTCATCAGTTCCTGGGTGACCAAGAGGCGATCCAAGCAGCCATTAAGAAAGTAGAAGATCAAGGAAAAGTGAAACAAGCTAAAAAATA GTCTTTCTCAACTGTTGGCTAAGAAGAAATGCAAAAGAAGTGGCATAGGAGTGTGTTATGGGTGCTGAACTCTCTCTCTTTTTCCCCGAT TTTCCAGAGCTAGGCTGTGGAGTAGAGTTTGTATAGGTAACTAGGTAACTTATTGTGGCCCAGATAAGGCTTTAGGATGCCTCAGTGCTT ATGTCATAGCCTTATGAGTTAGCTTTCTTGCTAGCCCCCTAGTCGGTCACCAAACTAGTAACTAGTGGGGCTTAATGAAGGTCATAAGTT TCTGAGATGGGAGAGCAACAAGTAGAGATGAAGTTAAAGGTATTTATCATTCAAGAAATCATTATTGAGTCACCATTGACAGGCACTATT CTAATCAGTAGTTCACTTTAATATTTAATAAGATTTTCTGGGATAACAGTAAGGGATATTAGATAATATACCGTATGTATTTATTACTAG TCTTTTCCTCTAGGAAAAGGGATACTTTGATAATTAAGGCCAGAGGCCCATTAGTTGAGAAAGTCACAGATATATTTCTCCAAGAAAGCC AACAACCACCACCACAATGACAGAAATGACAACAAGGCCCTTTAACTTGTCTTCTAGTTTAGAGACATCCTTCATTTGACATTTAGTAGA ATTCCTCTTTGGCCACAAGAATAAGCAGCAAATAAACAACTATGGCTGTTGAGGTTCTCATTTTGGTTTGTTTTAATTTTTTGAACTTTG >In-frame_ENST00000267811_ENST00000393132_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(amino acids)=108AA_start in transcript=304_stop in transcript=630 MNPQQQRMAAIGTDKELSDLLDFSAMFSPPVNSGKTRPTTLGSSQFSGSGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEAI -------------------------------------------------------------- >In-frame_ENST00000452095_ENST00000344924_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(transcript)=1403nt_BP=442nt TCCGGAGGCGAGCCGAGCGCGGTGGTGAGGCCGCCTCAGCGAAAAAAATGTCCGCCTGAAGAGACCCACAAGTTCTATTCGGGGGGACCG ACAGCCCGCCCCGGGAGGAAGGGGCGGCCAGGCCCGAAAGCCGCCTCCCCCTCCCAGACCCGAGAGCTCGTGCGGGGCAAAGTGAACCGA GCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCGGGGTGGTTGGATGCGGAGACGGGGCGGC AGGACCTGCTAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTGAGCGACCTACTGGAC TTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGGAAAACTAGACCAACTACACTGGGAAGCAGTCAATTCAGTGGATCAGGTATCTCA GATGAAGACATCATCAACATTACTCTTCCTACTGGAGTCCCCATTCTTCTGGAATTGGATGAAAACCTGCGTGCTGTTGGGCCTCATCAG TTCCTGGGTGACCAAGAGGCGATCCAAGCAGCCATTAAGAAAGTAGAAGATCAAGGAAAAGTGAAACAAGCTAAAAAATAGTCTTTCTCA ACTGTTGGCTAAGAAGAAATGCAAAAGAAGTGGCATAGGAGTGTGTTATGGGTGCTGAACTCTCTCTCTTTTTCCCCGATTTTCCAGAGC TAGGCTGTGGAGTAGAGTTTGTATAGGTAACTAGGTAACTTATTGTGGCCCAGATAAGGCTTTAGGATGCCTCAGTGCTTATGTCATAGC CTTATGAGTTAGCTTTCTTGCTAGCCCCCTAGTCGGTCACCAAACTAGTAACTAGTGGGGCTTAATGAAGGTCATAAGTTTCTGAGATGG GAGAGCAACAAGTAGAGATGAAGTTAAAGGTATTTATCATTCAAGAAATCATTATTGAGTCACCATTGACAGGCACTATTCTAATCAGTA GTTCACTTTAATATTTAATAAGATTTTCTGGGATAACAGTAAGGGATATTAGATAATATACCGTATGTATTTATTACTAGTCTTTTCCTC TAGGAAAAGGGATACTTTGATAATTAAGGCCAGAGGCCCATTAGTTGAGAAAGTCACAGATATATTTCTCCAAGAAAGCCAACAACCACC ACCACAATGACAGAAATGACAACAAGGCCCTTTAACTTGTCTTCTAGTTTAGAGACATCCTTCATTTGACATTTAGTAGAATTCCTCTTT GGCCACAAGAATAAGCAGCAAATAAACAACTATGGCTGTTGAGGTTCTCATTTTGGTTTGTTTTAATTTTTTGAACTTTGGGTACCTGTA >In-frame_ENST00000452095_ENST00000344924_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(amino acids)=108AA_start in transcript=294_stop in transcript=620 MNPQQQRMAAIGTDKELSDLLDFSAMFSPPVNSGKTRPTTLGSSQFSGSGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEAI -------------------------------------------------------------- >In-frame_ENST00000452095_ENST00000393132_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(transcript)=1403nt_BP=442nt TCCGGAGGCGAGCCGAGCGCGGTGGTGAGGCCGCCTCAGCGAAAAAAATGTCCGCCTGAAGAGACCCACAAGTTCTATTCGGGGGGACCG ACAGCCCGCCCCGGGAGGAAGGGGCGGCCAGGCCCGAAAGCCGCCTCCCCCTCCCAGACCCGAGAGCTCGTGCGGGGCAAAGTGAACCGA GCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCGGGGTGGTTGGATGCGGAGACGGGGCGGC AGGACCTGCTAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTGAGCGACCTACTGGAC TTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGGAAAACTAGACCAACTACACTGGGAAGCAGTCAATTCAGTGGATCAGGTATCTCA GATGAAGACATCATCAACATTACTCTTCCTACTGGAGTCCCCATTCTTCTGGAATTGGATGAAAACCTGCGTGCTGTTGGGCCTCATCAG TTCCTGGGTGACCAAGAGGCGATCCAAGCAGCCATTAAGAAAGTAGAAGATCAAGGAAAAGTGAAACAAGCTAAAAAATAGTCTTTCTCA ACTGTTGGCTAAGAAGAAATGCAAAAGAAGTGGCATAGGAGTGTGTTATGGGTGCTGAACTCTCTCTCTTTTTCCCCGATTTTCCAGAGC TAGGCTGTGGAGTAGAGTTTGTATAGGTAACTAGGTAACTTATTGTGGCCCAGATAAGGCTTTAGGATGCCTCAGTGCTTATGTCATAGC CTTATGAGTTAGCTTTCTTGCTAGCCCCCTAGTCGGTCACCAAACTAGTAACTAGTGGGGCTTAATGAAGGTCATAAGTTTCTGAGATGG GAGAGCAACAAGTAGAGATGAAGTTAAAGGTATTTATCATTCAAGAAATCATTATTGAGTCACCATTGACAGGCACTATTCTAATCAGTA GTTCACTTTAATATTTAATAAGATTTTCTGGGATAACAGTAAGGGATATTAGATAATATACCGTATGTATTTATTACTAGTCTTTTCCTC TAGGAAAAGGGATACTTTGATAATTAAGGCCAGAGGCCCATTAGTTGAGAAAGTCACAGATATATTTCTCCAAGAAAGCCAACAACCACC ACCACAATGACAGAAATGACAACAAGGCCCTTTAACTTGTCTTCTAGTTTAGAGACATCCTTCATTTGACATTTAGTAGAATTCCTCTTT GGCCACAAGAATAAGCAGCAAATAAACAACTATGGCTGTTGAGGTTCTCATTTTGGTTTGTTTTAATTTTTTGAACTTTGGGTACCTGTA >In-frame_ENST00000452095_ENST00000393132_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(amino acids)=108AA_start in transcript=294_stop in transcript=620 MNPQQQRMAAIGTDKELSDLLDFSAMFSPPVNSGKTRPTTLGSSQFSGSGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEAI -------------------------------------------------------------- >In-frame_ENST00000333725_ENST00000344924_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(transcript)=1344nt_BP=383nt AGAGACCCACAAGTTCTATTCGGGGGGACCGACAGCCCGCCCCGGGAGGAAGGGGCGGCCAGGCCCGAAAGCCGCCTCCCCCTCCCAGAC CCGAGAGCTCGTGCGGGGCAAAGTGAACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAA TCGGGGTGGTTGGATGCGGAGACGGGGCGGCAGGACCTGCTAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGG GACCGACAAGGAGCTGAGCGACCTACTGGACTTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGGAAAACTAGACCAACTACACTGGG AAGCAGTCAATTCAGTGGATCAGGTATCTCAGATGAAGACATCATCAACATTACTCTTCCTACTGGAGTCCCCATTCTTCTGGAATTGGA TGAAAACCTGCGTGCTGTTGGGCCTCATCAGTTCCTGGGTGACCAAGAGGCGATCCAAGCAGCCATTAAGAAAGTAGAAGATCAAGGAAA AGTGAAACAAGCTAAAAAATAGTCTTTCTCAACTGTTGGCTAAGAAGAAATGCAAAAGAAGTGGCATAGGAGTGTGTTATGGGTGCTGAA CTCTCTCTCTTTTTCCCCGATTTTCCAGAGCTAGGCTGTGGAGTAGAGTTTGTATAGGTAACTAGGTAACTTATTGTGGCCCAGATAAGG CTTTAGGATGCCTCAGTGCTTATGTCATAGCCTTATGAGTTAGCTTTCTTGCTAGCCCCCTAGTCGGTCACCAAACTAGTAACTAGTGGG GCTTAATGAAGGTCATAAGTTTCTGAGATGGGAGAGCAACAAGTAGAGATGAAGTTAAAGGTATTTATCATTCAAGAAATCATTATTGAG TCACCATTGACAGGCACTATTCTAATCAGTAGTTCACTTTAATATTTAATAAGATTTTCTGGGATAACAGTAAGGGATATTAGATAATAT ACCGTATGTATTTATTACTAGTCTTTTCCTCTAGGAAAAGGGATACTTTGATAATTAAGGCCAGAGGCCCATTAGTTGAGAAAGTCACAG ATATATTTCTCCAAGAAAGCCAACAACCACCACCACAATGACAGAAATGACAACAAGGCCCTTTAACTTGTCTTCTAGTTTAGAGACATC CTTCATTTGACATTTAGTAGAATTCCTCTTTGGCCACAAGAATAAGCAGCAAATAAACAACTATGGCTGTTGAGGTTCTCATTTTGGTTT >In-frame_ENST00000333725_ENST00000344924_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(amino acids)=108AA_start in transcript=235_stop in transcript=561 MNPQQQRMAAIGTDKELSDLLDFSAMFSPPVNSGKTRPTTLGSSQFSGSGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEAI -------------------------------------------------------------- >In-frame_ENST00000333725_ENST00000393132_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(transcript)=1344nt_BP=383nt AGAGACCCACAAGTTCTATTCGGGGGGACCGACAGCCCGCCCCGGGAGGAAGGGGCGGCCAGGCCCGAAAGCCGCCTCCCCCTCCCAGAC CCGAGAGCTCGTGCGGGGCAAAGTGAACCGAGCCGCTGGGCGGTGCAAGGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAA TCGGGGTGGTTGGATGCGGAGACGGGGCGGCAGGACCTGCTAGAAGTGGCCGAAGATGAATCCCCAGCAACAACGCATGGCCGCTATAGG GACCGACAAGGAGCTGAGCGACCTACTGGACTTCAGTGCGATGTTTTCCCCACCTGTTAATAGTGGGAAAACTAGACCAACTACACTGGG AAGCAGTCAATTCAGTGGATCAGGTATCTCAGATGAAGACATCATCAACATTACTCTTCCTACTGGAGTCCCCATTCTTCTGGAATTGGA TGAAAACCTGCGTGCTGTTGGGCCTCATCAGTTCCTGGGTGACCAAGAGGCGATCCAAGCAGCCATTAAGAAAGTAGAAGATCAAGGAAA AGTGAAACAAGCTAAAAAATAGTCTTTCTCAACTGTTGGCTAAGAAGAAATGCAAAAGAAGTGGCATAGGAGTGTGTTATGGGTGCTGAA CTCTCTCTCTTTTTCCCCGATTTTCCAGAGCTAGGCTGTGGAGTAGAGTTTGTATAGGTAACTAGGTAACTTATTGTGGCCCAGATAAGG CTTTAGGATGCCTCAGTGCTTATGTCATAGCCTTATGAGTTAGCTTTCTTGCTAGCCCCCTAGTCGGTCACCAAACTAGTAACTAGTGGG GCTTAATGAAGGTCATAAGTTTCTGAGATGGGAGAGCAACAAGTAGAGATGAAGTTAAAGGTATTTATCATTCAAGAAATCATTATTGAG TCACCATTGACAGGCACTATTCTAATCAGTAGTTCACTTTAATATTTAATAAGATTTTCTGGGATAACAGTAAGGGATATTAGATAATAT ACCGTATGTATTTATTACTAGTCTTTTCCTCTAGGAAAAGGGATACTTTGATAATTAAGGCCAGAGGCCCATTAGTTGAGAAAGTCACAG ATATATTTCTCCAAGAAAGCCAACAACCACCACCACAATGACAGAAATGACAACAAGGCCCTTTAACTTGTCTTCTAGTTTAGAGACATC CTTCATTTGACATTTAGTAGAATTCCTCTTTGGCCACAAGAATAAGCAGCAAATAAACAACTATGGCTGTTGAGGTTCTCATTTTGGTTT >In-frame_ENST00000333725_ENST00000393132_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(amino acids)=108AA_start in transcript=235_stop in transcript=561 MNPQQQRMAAIGTDKELSDLLDFSAMFSPPVNSGKTRPTTLGSSQFSGSGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEAI -------------------------------------------------------------- >In-frame_ENST00000557843_ENST00000344924_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(transcript)=1196nt_BP=235nt GGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCGGGGTGGTTGGATGCGGAGACGGGGCGGCAGAAGTGGCCGAAGATG AATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTGAGCGACCTACTGGACTTCAGTGCGATGTTTTCCCCACCTGTT AATAGTGGGAAAACTAGACCAACTACACTGGGAAGCAGTCAATTCAGTGGATCAGGTATCTCAGATGAAGACATCATCAACATTACTCTT CCTACTGGAGTCCCCATTCTTCTGGAATTGGATGAAAACCTGCGTGCTGTTGGGCCTCATCAGTTCCTGGGTGACCAAGAGGCGATCCAA GCAGCCATTAAGAAAGTAGAAGATCAAGGAAAAGTGAAACAAGCTAAAAAATAGTCTTTCTCAACTGTTGGCTAAGAAGAAATGCAAAAG AAGTGGCATAGGAGTGTGTTATGGGTGCTGAACTCTCTCTCTTTTTCCCCGATTTTCCAGAGCTAGGCTGTGGAGTAGAGTTTGTATAGG TAACTAGGTAACTTATTGTGGCCCAGATAAGGCTTTAGGATGCCTCAGTGCTTATGTCATAGCCTTATGAGTTAGCTTTCTTGCTAGCCC CCTAGTCGGTCACCAAACTAGTAACTAGTGGGGCTTAATGAAGGTCATAAGTTTCTGAGATGGGAGAGCAACAAGTAGAGATGAAGTTAA AGGTATTTATCATTCAAGAAATCATTATTGAGTCACCATTGACAGGCACTATTCTAATCAGTAGTTCACTTTAATATTTAATAAGATTTT CTGGGATAACAGTAAGGGATATTAGATAATATACCGTATGTATTTATTACTAGTCTTTTCCTCTAGGAAAAGGGATACTTTGATAATTAA GGCCAGAGGCCCATTAGTTGAGAAAGTCACAGATATATTTCTCCAAGAAAGCCAACAACCACCACCACAATGACAGAAATGACAACAAGG CCCTTTAACTTGTCTTCTAGTTTAGAGACATCCTTCATTTGACATTTAGTAGAATTCCTCTTTGGCCACAAGAATAAGCAGCAAATAAAC AACTATGGCTGTTGAGGTTCTCATTTTGGTTTGTTTTAATTTTTTGAACTTTGGGTACCTGTAATTAGTTTAAAAATAAAGTTCCTGATA >In-frame_ENST00000557843_ENST00000344924_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(amino acids)=120AA_start in transcript=51_stop in transcript=413 MDAETGRQKWPKMNPQQQRMAAIGTDKELSDLLDFSAMFSPPVNSGKTRPTTLGSSQFSGSGISDEDIINITLPTGVPILLELDENLRAV -------------------------------------------------------------- >In-frame_ENST00000557843_ENST00000393132_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(transcript)=1196nt_BP=235nt GGGGAAGCCCAAGCCCGTTCTCCCGGCCAAAGTGAACTTTAATCGGGGTGGTTGGATGCGGAGACGGGGCGGCAGAAGTGGCCGAAGATG AATCCCCAGCAACAACGCATGGCCGCTATAGGGACCGACAAGGAGCTGAGCGACCTACTGGACTTCAGTGCGATGTTTTCCCCACCTGTT AATAGTGGGAAAACTAGACCAACTACACTGGGAAGCAGTCAATTCAGTGGATCAGGTATCTCAGATGAAGACATCATCAACATTACTCTT CCTACTGGAGTCCCCATTCTTCTGGAATTGGATGAAAACCTGCGTGCTGTTGGGCCTCATCAGTTCCTGGGTGACCAAGAGGCGATCCAA GCAGCCATTAAGAAAGTAGAAGATCAAGGAAAAGTGAAACAAGCTAAAAAATAGTCTTTCTCAACTGTTGGCTAAGAAGAAATGCAAAAG AAGTGGCATAGGAGTGTGTTATGGGTGCTGAACTCTCTCTCTTTTTCCCCGATTTTCCAGAGCTAGGCTGTGGAGTAGAGTTTGTATAGG TAACTAGGTAACTTATTGTGGCCCAGATAAGGCTTTAGGATGCCTCAGTGCTTATGTCATAGCCTTATGAGTTAGCTTTCTTGCTAGCCC CCTAGTCGGTCACCAAACTAGTAACTAGTGGGGCTTAATGAAGGTCATAAGTTTCTGAGATGGGAGAGCAACAAGTAGAGATGAAGTTAA AGGTATTTATCATTCAAGAAATCATTATTGAGTCACCATTGACAGGCACTATTCTAATCAGTAGTTCACTTTAATATTTAATAAGATTTT CTGGGATAACAGTAAGGGATATTAGATAATATACCGTATGTATTTATTACTAGTCTTTTCCTCTAGGAAAAGGGATACTTTGATAATTAA GGCCAGAGGCCCATTAGTTGAGAAAGTCACAGATATATTTCTCCAAGAAAGCCAACAACCACCACCACAATGACAGAAATGACAACAAGG CCCTTTAACTTGTCTTCTAGTTTAGAGACATCCTTCATTTGACATTTAGTAGAATTCCTCTTTGGCCACAAGAATAAGCAGCAAATAAAC AACTATGGCTGTTGAGGTTCTCATTTTGGTTTGTTTTAATTTTTTGAACTTTGGGTACCTGTAATTAGTTTAAAAATAAAGTTCCTGATA >In-frame_ENST00000557843_ENST00000393132_TCGA-E2-A1IJ_TCF12_chr15_57213296_+_BPGM_chr7_134363604_length(amino acids)=120AA_start in transcript=51_stop in transcript=413 MDAETGRQKWPKMNPQQQRMAAIGTDKELSDLLDFSAMFSPPVNSGKTRPTTLGSSQFSGSGISDEDIINITLPTGVPILLELDENLRAV -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for TCF12-BPGM |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000267811 | + | 3 | 20 | 182_196 | 49.333333333333336 | 1821.3333333333333 | RUNX1T1 |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000333725 | + | 3 | 21 | 182_196 | 49.333333333333336 | 1420.0 | RUNX1T1 |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000343827 | + | 1 | 13 | 182_196 | 0 | 1254.6666666666667 | RUNX1T1 |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000438423 | + | 3 | 21 | 182_196 | 49.333333333333336 | 1398.3333333333333 | RUNX1T1 |
Hgene | TCF12 | chr15:57213296 | chr7:134363604 | ENST00000557843 | + | 3 | 20 | 182_196 | 49.333333333333336 | 1301.0 | RUNX1T1 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for TCF12-BPGM |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for TCF12-BPGM |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | TCF12 | C3715051 | CRANIOSYNOSTOSIS 3 | 3 | GENOMICS_ENGLAND;UNIPROT |
Hgene | TCF12 | C0010278 | Craniosynostosis | 1 | CTD_human |
Hgene | TCF12 | C0030044 | Acrocephaly | 1 | CTD_human |
Hgene | TCF12 | C0221356 | Brachycephaly | 1 | CTD_human;ORPHANET |
Hgene | TCF12 | C0265529 | Plagiocephaly | 1 | ORPHANET |
Hgene | TCF12 | C0265534 | Scaphycephaly | 1 | CTD_human |
Hgene | TCF12 | C0265535 | Trigonocephaly | 1 | CTD_human |
Hgene | TCF12 | C1275278 | Extraskeletal Myxoid Chondrosarcoma | 1 | ORPHANET |
Hgene | TCF12 | C1833340 | Synostotic Posterior Plagiocephaly | 1 | CTD_human |
Hgene | TCF12 | C1856266 | Coronal craniosynostosis | 1 | GENOMICS_ENGLAND |
Hgene | TCF12 | C1860819 | Metopic synostosis | 1 | CTD_human |
Hgene | TCF12 | C2931150 | Synostotic Anterior Plagiocephaly | 1 | CTD_human |
Hgene | TCF12 | C4551902 | Craniosynostosis, Type 1 | 1 | CTD_human |
Tgene | BPGM | C1291620 | Deficiency of bisphosphoglycerate mutase | 3 | CTD_human;ORPHANET;UNIPROT |