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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:TECTA-FOXN3 (FusionGDB2 ID:89385)

Fusion Gene Summary for TECTA-FOXN3

check button Fusion gene summary
Fusion gene informationFusion gene name: TECTA-FOXN3
Fusion gene ID: 89385
HgeneTgene
Gene symbol

TECTA

FOXN3

Gene ID

7007

1112

Gene nametectorin alphaforkhead box N3
SynonymsDFNA12|DFNA8|DFNB21C14orf116|CHES1|PRO1635
Cytomap

11q23.3

14q31.3-q32.11

Type of geneprotein-codingprotein-coding
Descriptionalpha-tectorinforkhead box protein N3checkpoint suppressor 1
Modification date2020031320200313
UniProtAcc.

O00409

Ensembl transtripts involved in fusion geneENST00000392793, ENST00000264037, 
ENST00000478058, 		ENST00000345097, 
ENST00000261302, ENST00000557258, 
ENST00000555353, ENST00000555658, 
Fusion gene scores* DoF score3 X 3 X 3=2719 X 14 X 9=2394
# samples 320
** MAII scorelog2(3/27*10)=0.15200309344505
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0		log2(20/2394*10)=-3.58135124716878
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: TECTA [Title/Abstract] AND FOXN3 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointTECTA(121000920)-FOXN3(89629313), # samples:3
Anticipated loss of major functional domain due to fusion event.TECTA-FOXN3 seems lost the major protein functional domain in Tgene partner, which is a transcription factor due to the frame-shifted ORF.
TECTA-FOXN3 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneFOXN3

GO:0045892

negative regulation of transcription, DNA-templated

16102918


check buttonFusion gene breakpoints across TECTA (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across FOXN3 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4PCPGTCGA-RW-A688-01ATECTAchr11

121000920

+FOXN3chr14

89629313

-
ChimerDB4PCPGTCGA-RW-A688-01ATECTAchr11

121000920

+FOXN3chr14

89629313

-
ChimerDB4PCPGTCGA-RW-A688-01ATECTAchr11

121000920

-FOXN3chr14

89629313

-


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Fusion Gene ORF analysis for TECTA-FOXN3

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
Frame-shiftENST00000392793ENST00000345097TECTAchr11

121000920

+FOXN3chr14

89629313

-
In-frameENST00000392793ENST00000261302TECTAchr11

121000920

+FOXN3chr14

89629313

-
In-frameENST00000392793ENST00000557258TECTAchr11

121000920

+FOXN3chr14

89629313

-
Frame-shiftENST00000392793ENST00000555353TECTAchr11

121000920

+FOXN3chr14

89629313

-
5CDS-intronENST00000392793ENST00000555658TECTAchr11

121000920

+FOXN3chr14

89629313

-
Frame-shiftENST00000264037ENST00000345097TECTAchr11

121000920

+FOXN3chr14

89629313

-
In-frameENST00000264037ENST00000261302TECTAchr11

121000920

+FOXN3chr14

89629313

-
In-frameENST00000264037ENST00000557258TECTAchr11

121000920

+FOXN3chr14

89629313

-
Frame-shiftENST00000264037ENST00000555353TECTAchr11

121000920

+FOXN3chr14

89629313

-
5CDS-intronENST00000264037ENST00000555658TECTAchr11

121000920

+FOXN3chr14

89629313

-
intron-3CDSENST00000478058ENST00000345097TECTAchr11

121000920

+FOXN3chr14

89629313

-
intron-3CDSENST00000478058ENST00000261302TECTAchr11

121000920

+FOXN3chr14

89629313

-
intron-3CDSENST00000478058ENST00000557258TECTAchr11

121000920

+FOXN3chr14

89629313

-
intron-3CDSENST00000478058ENST00000555353TECTAchr11

121000920

+FOXN3chr14

89629313

-
intron-intronENST00000478058ENST00000555658TECTAchr11

121000920

+FOXN3chr14

89629313

-

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000392793TECTAchr11121000920+ENST00000261302FOXN3chr1489629313-9997321219036541154
ENST00000392793TECTAchr11121000920+ENST00000557258FOXN3chr1489629313-4797321219036541154
ENST00000264037TECTAchr11121000920+ENST00000261302FOXN3chr1489629313-97262941033831127
ENST00000264037TECTAchr11121000920+ENST00000557258FOXN3chr1489629313-45262941033831127

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000392793ENST00000261302TECTAchr11121000920+FOXN3chr1489629313-0.000109050.9998909
ENST00000392793ENST00000557258TECTAchr11121000920+FOXN3chr1489629313-0.0005073330.99949265
ENST00000264037ENST00000261302TECTAchr11121000920+FOXN3chr1489629313-7.91E-050.99992085
ENST00000264037ENST00000557258TECTAchr11121000920+FOXN3chr1489629313-0.0004233870.9995766

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Fusion Genomic Features for TECTA-FOXN3


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for TECTA-FOXN3


check button Go to

FGviewer for the breakpoints of chr11:121000920-chr14:89629313

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.FOXN3

O00409

FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Acts as a transcriptional repressor. May be involved in DNA damage-inducible cell cycle arrests (checkpoints). {ECO:0000269|PubMed:16102918}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneTECTAchr11:121000920chr14:89629313ENST00000264037+923260_314980.33333333333342156.0DomainNote=VWFC
HgeneTECTAchr11:121000920chr14:89629313ENST00000264037+923321_540980.33333333333342156.0DomainVWFD 1
HgeneTECTAchr11:121000920chr14:89629313ENST00000264037+923597_650980.33333333333342156.0DomainNote=TIL 1
HgeneTECTAchr11:121000920chr14:89629313ENST00000264037+923712_929980.33333333333342156.0DomainVWFD 2
HgeneTECTAchr11:121000920chr14:89629313ENST00000264037+92398_252980.33333333333342156.0DomainNIDO
HgeneTECTAchr11:121000920chr14:89629313ENST00000392793+1024260_314980.33333333333342156.0DomainNote=VWFC
HgeneTECTAchr11:121000920chr14:89629313ENST00000392793+1024321_540980.33333333333342156.0DomainVWFD 1
HgeneTECTAchr11:121000920chr14:89629313ENST00000392793+1024597_650980.33333333333342156.0DomainNote=TIL 1
HgeneTECTAchr11:121000920chr14:89629313ENST00000392793+1024712_929980.33333333333342156.0DomainVWFD 2
HgeneTECTAchr11:121000920chr14:89629313ENST00000392793+102498_252980.33333333333342156.0DomainNIDO

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneTECTAchr11:121000920chr14:89629313ENST00000264037+9231099_1317980.33333333333342156.0DomainVWFD 3
HgeneTECTAchr11:121000920chr14:89629313ENST00000264037+9231372_1425980.33333333333342156.0DomainNote=TIL 3
HgeneTECTAchr11:121000920chr14:89629313ENST00000264037+9231486_1694980.33333333333342156.0DomainVWFD 4
HgeneTECTAchr11:121000920chr14:89629313ENST00000264037+9231805_2059980.33333333333342156.0DomainZP
HgeneTECTAchr11:121000920chr14:89629313ENST00000264037+923984_1036980.33333333333342156.0DomainNote=TIL 2
HgeneTECTAchr11:121000920chr14:89629313ENST00000392793+10241099_1317980.33333333333342156.0DomainVWFD 3
HgeneTECTAchr11:121000920chr14:89629313ENST00000392793+10241372_1425980.33333333333342156.0DomainNote=TIL 3
HgeneTECTAchr11:121000920chr14:89629313ENST00000392793+10241486_1694980.33333333333342156.0DomainVWFD 4
HgeneTECTAchr11:121000920chr14:89629313ENST00000392793+10241805_2059980.33333333333342156.0DomainZP
HgeneTECTAchr11:121000920chr14:89629313ENST00000392793+1024984_1036980.33333333333342156.0DomainNote=TIL 2
TgeneFOXN3chr11:121000920chr14:89629313ENST0000026130246113_204305.6666666666667491.0DNA bindingFork-head
TgeneFOXN3chr11:121000920chr14:89629313ENST0000034509757113_204305.6666666666667491.0DNA bindingFork-head
TgeneFOXN3chr11:121000920chr14:89629313ENST0000055535346113_204283.6666666666667469.0DNA bindingFork-head
TgeneFOXN3chr11:121000920chr14:89629313ENST0000055725846113_204283.6666666666667469.0DNA bindingFork-head


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Fusion Gene Sequence for TECTA-FOXN3


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000392793_ENST00000261302_TCGA-RW-A688-01A_TECTA_chr11_121000920_+_FOXN3_chr14_89629313_length(transcript)=9997nt_BP=3212nt
CGCAATCCTGAAACTGATCTTTAGATTTACTTTTCCTTAATCAATAGAAAAAAACTTGATTGCAGCTCAACACTTACCTGTCTCTAGTGC
AGGACTAACTTAATTTTTGGTTTTAAGAGTACGAGATTCAGACATTATTTCAGGAATCAGAAATTATTGGCAACAAGTTGAGGAGAACTG
ACATGAATTCTTGTTTTACCTAATTTTTTCTGGCTTACCAAGATTTGGCTTAATATTTCTGACTCAGTTCCTCCAGCCTCTACAGAACAG
GATGAATTATTCATCATTCCTTAGAATTTGGGTCTCTTTCATCTTCGCACTTGTACAGCACCAAGCTCAGCCCAGGGAGCTCATGTATCC
ATTTTGGCAGAATGACACCAAAACCCCTAAAGTAGATGATGGAAGCTCATCTGAGATTAAGTTGGCCATCCCAGTTTTCTTCTTTGGCGT
TCCTTACCGCACTGTCTATGTCAATAACAACGGAGTTGTTTCCTTCAATGTGCTAGTGAGCCAGTTCACGCCAGAATCCTTTCCCCTGAC
AGATGGGAGAGCCTTCGTCGCCCCATTTTGGGCAGATGTGCACAATGGAATTCGAGGCGAGATCTATTACAGAGAGACCATGGAGCCTGC
CATCTTGAAAAGAGCCACCAAGGACATCAGGAAGTACTTCAAAGACATGGCAACCTTCTCTGCCACTTGGGTTTTCATTGTGACATGGGA
GGAAGTCACGTTTTATGGAGGCAGCAGCACCACACCTGTGAACACCTTCCAGGCCGTCCTAGTGTCCGATGGCTCCTATACATTCACCCT
CTTCAATTATTACGAAATCAACTGGACCACGGGGACGGCGAGTGGCGGCGACCCCCTGACAGGTCTTGGTGGAGTGATGGCACAGGCAGG
ATTTAATGGTGGAAACCTCACCAATTTCTTCAGCCTCCCGGGGTCAAGAACCCCCGAGATCGTGAATATCCAGGAGACCACAAACGTCAA
TGTTCCAGGCCGCTGGGCATTTAAAGTTGATGGAAAGGAAATTGACCCAGCCAATGGCTGCACCTCAAGGGGACAATTCCTTCGGCGAGG
GGAGGTGTTTTGGGATGACTTGAACTGCACCGTCAAGTGCCGCTGTCTGGATTTCAACAATGAGATCTACTGCCAGGAGGCTTCCTGTAG
CCCCTACGAGGTGTGCGAACCCAAAGGCAAATTCTTCTACTGCAGCGCTGTGGAGACCAGCACATGCGTGGTGTTTGGGGAGCCACACTA
CCACACTTTTGACGGCTTCCTCTTCCACTTCCAAGGCTCCTGTGCCTACTTGCTGGCCCGACAGTGTTTGCAGACTTCCAGCCTCCCTTT
CTTCAGTGTGGAGGCCAAGAATGAACACCGCAGAGGTTCAGCCGTCTCCTGGGTGAAGGAGCTCTCAGTGGAGGTGAATGGCTACAAGAT
TCTCATCCCCAAAGGAAGCTATGGAAGAGTCAAGGTTAATGACCTAGTGACTTCTTTGCCTGTCACCTTAGACTTGGGGACAGTGAAAAT
CTACCAGAGTGGCATATCTACTGCCGTGGAAACAGATTTTGGGCTCTTAGTGACTTTTGATGGCCAGCACTACGCCTCCATTTCCGTCCC
AGGCTCCTATATAAACTCCACCTGTGGACTCTGTGGAAACTATAATAAAAACCCACTGGATGACTTCCTCCGCCCGGATGGCAGGCCGGC
CATGTCTGTCCTGGATCTGGGAGAGAGCTGGCGTGTGTACCACGCAGACTGGAAGTGCGACTCCGGCTGCGTCGACAACTGCACCCAGTG
CGACGCTGCCACTGAAGCCCTCTACTTTGGCTCTGACTACTGCGGCTTCCTCAACAAGACAGACGGCCCTCTGTGGGAGTGTGGCACTGT
CGTGGACCCCACTGCTTTTGTGCACAGCTGCGTGTATGACCTGTGCAGTGTGAGGGACAATGGCACGCTCCTCTGCCAAGCCATCCAGGC
CTATGCTCTTGTGTGCCAAGCCCTTGGCATTCCAATTGGAGACTGGCGAACCCAGACTGGGTGTGTGTCCACAGTGCAGTGCCCGAGCTT
CAGCCACTACTCCGTGTGCACAAGCAGCTGCCCCGACACATGCTCCGACCTGACGGCCTCGCGGAACTGCGCCACGCCGTGCACAGAGGG
CTGCGAGTGCAACCAGGGCTTCGTCCTCAGCACCAGCCAGTGCGTCCCTCTGCACAAGTGCGGCTGCGACTTCGACGGCCACTACTACAC
CATGGGGGAGTTCTTCTGGGCCACGGCCAACTGCACTGTGCAATGCCTGTGCGAGGAGGGCGGGGACGTCTACTGCTTCAACAAGACCTG
CGGCAGCGGGGAGGTGTGCGCCGTGGAGGACGGCTACCAGGGCTGCTTCCCCAAGCGGGAGACCGTGTGCCTGCTCAGCCAGAACCAGGT
GCTGCACACCTTTGACGGCGCCTCCTACGCCTTCCCCTCCGAGTTCTCCTACACCCTCCTGAAGACCTGCCCTGAGCGCCCAGAGTACTT
GGAAATCGACATCAACAAGAAGAAGCCCGATGCAGGACCTGCTTGGCTGCGGGGACTTCGGATCCTGGTGGCCGACCAGGAGGTCAAGAT
AGGAGGCATCGGGGCTTCGGAAGTCAAGTTGAATGGTCAGGAAGTGGAATTGCCTTTTTTCCATCCTTCGGGGAAGCTGGAAATTTATCG
AAACAAAAACAGTACGACAGTGGAGTCCAAGGGCGTGGTGACTGTCCAGTACTCAGACATAGGTCTATTGTACATCCGGCTGTCCACCAC
ATACTTCAATTGCACAGGGGGCTTGTGCGGCTTCTACAATGCCAACGCCAGTGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGGACAA
CCTGGCAGTGTTCCTGGAAAGCTGGACAACTTTCGAGGAGATCTGCAATGGAGAGTGTGGGGACCTGCTGAAGGCCTGCAACAATGACTC
GGAGCTGCTCAAGTTTTATCGAAGCCGCTCCAGGTGCGGCATCATCAACGACCCCTCCAACAGCTCCTTCCTGGAGTGCCATGGGGTGGT
GAACGTCACTGCCTATTACCGCACCTGCCTTTTCCGCCTGTGCCAGAGTGGGGGCAATGAGTCAGAGCTCTGTGACTCTGTGGCCCGGTA
TGCAAGCGCCTGCAAGAATGCGGACGTGGAGGTGGGGCCCTGGCGGACCTATGACTTCTGCCGAATGGCATCACCAGCTGCCGGATGCGG
ACTGAGAGTGAGCCATCTTGTGGCTCCCCAGTGGTCAGCGGAGACCCCAAGGAGGATCACAACTACAGCAGTGCCAAGTCCTCCAACGCC
CGGAGCACCTCGCCCACCAGCGACTCCATCTCCTCCTCCTCCTCCTCAGCCGACGACCACTATGAGTTTGCCACCAAGGGGAGCCAGGAG
GGCAGCGAGGGCAGCGAGGGGAGCTTCCGGAGCCACGAGAGCCCCAGCGACACGGAAGAGGACGACAGGAAGCACAGCCAGAAGGAGCCC
AAGGATTCTCTGGGGGACAGCGGGTACGCATCCCAGCACAAGAAGCGCCAGCACTTCGCCAAGGCCAGGAAGGTCCCCAGCGACACACTG
CCCCTCAAAAAGAGACGCACCGAAAAGCCCCCCGAGAGCGATGATGAGGAGATGAAAGAAGCGGCAGGGTCCCTCCTGCACTTAGCAGGG
ATCCGGTCCTGTTTGAATAACATCACCAATCGGACGGCAAAGGGGCAGAAAGAGCAAAAGGAAACCACAAAAAATTAAAAACAAGTCACT
GATTTGTTTTGAACTTACGACCATTTGGTTTCAGCATGTCAGGAGATTTCTAATGATTTGTGGCAATATCAGCAATTTTTTTTCTTTTTT
CTTGTTTTTGGTTTGGTTTTCTTTCTTTTCTTTTCCTTTTATTTTGTTTTAATTTGCCCCCTCTTCTTTGTTTTGGACCCTTAAGAATTT
TATTTTTAAAGGAGATTGAAGCCATAGAACTCATATTGACACTCAGCTGTTTTACAAAAGCTTTTCATTATCTGAAGACAAAACCGAAAA
AGCCAAAATTACCATTGCTTCCTCCAGCTTGTCAGAAACCTGTGGCTGAATCCGCAGGGATGTCAACGTCAATATCACAGGAACACACAT
TCGGCACCTAGAAGGCACGTGGGCAAAGTAATCATCGTTCAGGCCCAACCCTTAGGTTTAAAAAGTCAGGTTGTCCATCCCATTGGGTTC
ACTGAGTGAAGGCACATAAAGCAATTGAGGAGGAGGAGGAACCCCTCGTCCCCCTAGGAGCAGACCCAAGCTTGTGGCACCAGGCATCTG
ATGGTGCCAGGAAAGCCACTGGAATTGTCACACGGCGAGCACAGAGGGCCGGCCACCAGTCCTCGATGCTTCTGAACCCTGAAGCCCGAT
GACATCTTACGAGGTGGACGTTGGACTGTTCATGCGCATCGGGTGTCAGTGACTCATGGAGAAGAAATGGGGTAAATTTTTAGTGATGTT
GCTAATCATTGAATTCTGTTCTCTATTAAATTAAGAAAATGTTCCAAAAGCCATAAGCCTGAAGATTGGCCCTGTGCACGCACGCACACA
CACACACACACACACACACACACACACACACACACGAAGGAGAGAGAGAGAAAACTGATGGGGAAAACAAGCTGTGTCTTCTTAACTGCC
CAAGTGAAAAGCAACCAAGTCCAGGAAATTACAATAGCTGTTAAGGAAAGGAAATAATGGTACAGATCTTTTTCTGTCTATCAAAACTAT
TTGATCCAAGTGAAAAAAAAAAAAAAACTAGAAAGCTACGGAACCTGCCATTAGTATTGTGGTGTATTTTTAAGATTAAAGGTACACTGA
TGGACAAAAAAAAAAAGTAAAACATGGCAAAAAATAAAATAACTCCTATACTGCCCTCAAAATGGAGTTTGCAATTAATATCAGGATTTA
TCTTTGCAAAAATCAGTGATTTCCACATTCAGCCAGTATAGCCAGCAGAAATTTCTGATCCACAATGCATGGATTCCTTTGAAGAAAAAA
AAGAAAAAGAGAAAAAAATCACAAAAACAAACTTTTTTTATTCAAAAGTAACAAAGTTCTTGTAAGGTAAATAATGTATTTAGCATGAAG
CATGAATTATTTTCATATAAATATAGAAAATAGAGAAAAGGCTATGCCTGTAATTTTTAAGCCCTTAGGCTTAGAGTTTCTTTTGGTTTT
CTTCTTTTTTCTTTCCTTTTCTTTGCTTTCTTTTTTTCCTTTTTGTTTTTGTTTTTGTTTTTTGTTTTTGTTTTTTTTTCGGGTTATTTT
GTTTTGGTTTTTTGAAGCAGGTGTTTAAGGTTTAACCTTCTTCAGGGACAAATTCTGACTGTTGGGGAACTTACTCTGCAATATAAAAAT
ATCTTCATGCTCTGGTAGGGCTTGGATGGTTGAACTCTGTACTGCCTTGTGTGCACTTCAGCCCCGACCCCCTCTGATTCTCTGTTGAAA
AGTGTGTCCTTTCTCTCTGTCTGTACATGTTTAACATGACGCAATAATTTGAGGGCAAACTTAGTAGTGAGTGTGTATGATAGAATCAAG
AGAATTATGGGACGCTTACTTGAGAAAATCATTACCATGATTTGGTTCTAGGAAAAAGGCAGTGAATAATTATGCAAATTAGCCAGAAGA
AGGGGAACCGTGCTAATGGGCCTTATTGGGTGAGGGGACGAGATGGGGTTCATGTGAAGGAGGAAGCGATGCCGAGGTAGGAAAGGCCAG
CCCCAGACATCCTATCGCCACAATGCCATGTCGCAATAGGAAGCAGGGGCCGGCCATCGCTACCTTCAGCACACTGACCAACCTGGAATT
AAGACCACCTAGATTGCGAGAGCTGAATTTAGAAACCAGACAACGTCATGCAGCCCAGAAACTCCTGTTGTTACCTTTGCCTAAGAAATT
TTCTTTAATGGCGGGGGCGGGGGGCGGGGGTACAAAGAGAAATCTCTAAAAGAATATGATCTTCCATCCAAGTGGAGGGAAACTTTAAAA
CAAAAACACCCAGTACTGTGGCTCAGGATATGATGCGTGAGGAGAGGGAGGGAACAGAGATGACCTTAACTTTTAAAAAAGGGACTGCTG
TGGGCCAAAGCCAAGCCCATCTGCCAGGACGAGGTAATGTCAGAGCTCCATCAGCCCGGACAGTGGGAACTAACTGGTGCATTCCCCACA
CTTACCTTCCGGTGGGTTGCTGATGAGAGAACCTGAAAAAACCTACACCTCTACAGCAGGTCGAATTCATGACCTGAAGCTGAATACTTC
CAGCATATTTATTCAGGGTGTAGGTGGGAATAAAGTATCTTCGCAGTGCTCTGTTCCCTCCGTCTCCCCAGACATCTGACACCCTAAAAG
CCATCCACAGCTATGGAACCTGAGCGACACCTTGATTTGTGTTGTCACCTGACCAAGCCTAAAGACCTCCAGCTCAGTCCCCCACCTTCA
TCCCACCCCACAGATGATAAAATTCAGACCTCTCTCCTGAAAGGCAGAGGTTCAACATTCAGGACTGTTTCTGGCCGAGGACTTCTTCCA
ATTAAAACCCCCACCGTGGGCTGTCTCCCCTCATTTCATTTTTCTAAAGGGGCAGAGGCCTCTTTTAGAAAATAATAAAATGCAATGTGT
GTGATTTACTTTTCTGATCTCTTTGAGAAATAGAGAAATATAAAAGTGTGTTCTTAACTCCAGAACCACTCTTTTTGCATAAATACCTCA
TCGGGCAGCTTTCTAAGTGTGATTTTCCTGAGTCTCCCTTCGTTGGATCTGCCGGAAGACTTGTCGGGGAACCTTTAGTGAGGGTACTTC
TTCCTATTTTTCTTCTGTTTTTGGAGGCATACACATTATGCATAACCAAAACAATGGCTCAATTGTGTTTAACTTTGTATTTTGATTGTT
GAGAACAAAAACAAAAAGTATCAATGTGTATGTGGCTGTTTGTAGTGAATTTATTGGAGAATGAGGTTGTCCGTGTCCTTAACAAGCCAA
GGGGCAGGAGGCACCCTCTCTTATCCCCTCCTCCAAGAGCAGTAGAGAATTTAAGCACAAGCCTATTTGTGAAAGAATATTTTGCTTAAG
TGTCATTCACTTTAGTCTTGGAATTCCTTCCCAAACGTCAGGTGTTCTTTTAGCTTCCAAACTAGCATATGTATCCATTAGTCTGACAGA
TCGCCTGAACACCATTAAGAGGTGTGGCGTTTTTGCTTTCATTTCTCCTGCTGGGAGAAGTGGCGGTTCATGTGTCATTCCAGTATCTCA
CATACTCACACGGGGCAGGGGGGAGGGGGAAACGGGGAACTATAGCAATATTTAAAGATGCTTTGGAAACCAACCGTGAACACATCAACA
CCACGACGTCTACGATTACTTGCTATTGGCCCTCGGATACATTTAAGAGAAAGAGACAGTCACTCTTTTTTTTCTTAAATGATATACATA
TAAACAGTTATTTTTATCCTATTATAATTGTCTTTTGTCTTTATCTAGTACTATGTGGAAAGGGTTTGCATCATAGATTTTTCCCAGCCT
TATAATATACCATAAGCTCCTACTTCCCTGCCCCTCCCTAATCAGTATTCTTTCAAGAGTTCTTTGGTGAAGCCATCTATCTGAAACTAA
AATGAACCAAACCCATATTTCACTGGTGGTTGGAGAAAACCATGGCCAAAACGATTGTGGCAGGTCTCAATCTTGGGAGTTTTTAAGAAG
GAATGTGCCAGAGGCCGATTCCCAAGAACAGAGTTTTCTTTTGTTTTGCAGAGGCATTCAATGTGTCTAGTGCTTGCTGGCCACAGCAGT
TACTACCACAGAGCCTTCTGGGAGGGGCCGTTGTGTTGAAGGAGGCTCCTGCCTGAGGGACAGCATCAGGCAGTGGGCTCTGTAGAGTGA
GAACCAGGTGGAGGCCTTCTGTGCCCAGCTCAGAGTTCTGCACCACGCCAGGACTGCCCAGGCCAAGGGCTACTGACGCAAGTTCCACTC
ATTCCACTCTGTGGGGGGCGCCTTGGGCCTCTCCTGGAAGGGCTCTTGGAGAAGGAATTGGAGTTACGTACAAGTGACCTAAATGGGAAG
CTTTTCTAGATGAGATTGGATTAAATTCCATGTGATTTCTCTTTCCCTTTAATCCAGGTTGGGACTCGTTTCTTTCTGGTGGATCACAGC
TGCCCAGATGTTGCAATTGATTTTTATGTTTCTGTAGAGAAGTATTTTTCTTTCATCTTCAGGATTTTTTTTGCCACCAAAAGAAAACAT
TGGAACTCTGTGTTTCCTCTTGATTGTGACTTCCCAGTGTTGACAGTTAAGTCCTTAGTGTCGTAGGTCCCAGCCCACCAATACTATATC
AAACACTGTTATGCACATAATGCAGCACTGTGATCTAATTTAAATAATACTTTTTTATTATTTATACTACTATATATAATATACATCAAC
ACTTTTGCTATATAACCTAAGTGATAACCCTCTTTTAGTTACCTGCCAAACTCTGGACTTGGTTTATATTGCAGTTAACACAGTTACAAA
GCTGTAATGGTGTCTTTTTTTCCTTTGTAACGGAATGTGTAAATCAAAGTATATACATTGTGTGGTGTTCCTGTTTCTGGAGTTTCATGA
GGATTTACACATGGCATTCAGTGTTCTGTATAGATCTGCCTACCTTTGTGAATTCATCTGTTAACCCCTCTTCCTTTGAGAGAGCACCGG
CGATGGTGGTTAACTCCTTGTGTTTTCTCTCTCTCCTACTGGTTATTCTTGAATTAAGCACAGACTCGTCAGCTCGGTTGCTTTATCATG
AATAATGTGTGTGACCTTGCAGTTCTTCCACAGTTCAGCAAACAAGTGCTAGCTTCACTGACCAAAAATTAAGGAAGGAAAACACAGTTT
TTAAAACGATCCATCTTTTAACAGCCGAAACCGATGTGTCTATGGTGCTGCACCTTGCTGTTGTACTTCTGAAATCAGACGTGTGTGAAC
GATCATTTCTGACTTAACCGTGAGATGCTCACGAGTACCCTTCCTGTTGTTTTGTTAGCATTGAAATCGAGACTATTTATTTGGAATATA
TACAACAGTGTTTTTCCACTGTATTTCATTTGCAAAAGTTGAGAACTGCTTTCTCTACCTTTTGCAAAATAATTGATATTCCATATTGGA
TTCTCAAAGACTTCGATATGGTGAACCTATTAAACCTAGAAATTGTATTCATCCTTTCATGACTGTGGCCTGAGTTCCCCAGCCCCTCTC
CTCCTTTTTTTTAGATGAGATTTAGCACACTCTCAGTTATTTAAACATGCAACATTTCTTGAGTATGTATGTTGAGGCCATCTGAGCTCA
TAGCTGATTCAGTAACCAGTTTCATGCTGTGTCATTCACACTCACTACTTAATACTGCCATGGTGAAAATGTGGAGGAAAAATGTATCCA
TGTGTGTCTGGGAAGCATATACACTTGTACATTTTTTAATACTCTGATTCTGTAACATTTCTGAGTTTTGTTTTGTTTTACAGAAAAAAA
AAAAAAGTGATAAAGCAATCAGAAGACCAAGAGGTTTACTATTGATGCTTAGGGTCGTCTGACCTTGGCTGGCCAATAGACCTACACGGC
CAAATTAATTTACGAGAGTAATAATTTTTCAAAAGCCAATTTTTTTTCTGTATTTTCTGTATGAAACTGCCAATATCATGAATAGAAAGG
GAGAACCATAAAGGAGAAAGAACGTGATGTTCTGTTATGTTCATGTAAACCTAAAGAAACAGTGTGGAGGCAGGCGCGATCAGCCGAACT
CTAGGGACTTGGTGTTGCTTGGAAGGCATCCATACCTGCATTTTGCATTCTTCGTATGTAATCATATTGCCAAAGACAAACTATTTCATC
ATTTATTGTAAATAACACTTTTCCCCAGACCTACCATAAAGTTTCTGTGATGTATTGTCTTCCAGTTGCAATAAAAATTACTGAGTTGCA

>In-frame_ENST00000392793_ENST00000261302_TCGA-RW-A688-01A_TECTA_chr11_121000920_+_FOXN3_chr14_89629313_length(amino acids)=1154AA_start in transcript=190_stop in transcript=3654
MFYLIFSGLPRFGLIFLTQFLQPLQNRMNYSSFLRIWVSFIFALVQHQAQPRELMYPFWQNDTKTPKVDDGSSSEIKLAIPVFFFGVPYR
TVYVNNNGVVSFNVLVSQFTPESFPLTDGRAFVAPFWADVHNGIRGEIYYRETMEPAILKRATKDIRKYFKDMATFSATWVFIVTWEEVT
FYGGSSTTPVNTFQAVLVSDGSYTFTLFNYYEINWTTGTASGGDPLTGLGGVMAQAGFNGGNLTNFFSLPGSRTPEIVNIQETTNVNVPG
RWAFKVDGKEIDPANGCTSRGQFLRRGEVFWDDLNCTVKCRCLDFNNEIYCQEASCSPYEVCEPKGKFFYCSAVETSTCVVFGEPHYHTF
DGFLFHFQGSCAYLLARQCLQTSSLPFFSVEAKNEHRRGSAVSWVKELSVEVNGYKILIPKGSYGRVKVNDLVTSLPVTLDLGTVKIYQS
GISTAVETDFGLLVTFDGQHYASISVPGSYINSTCGLCGNYNKNPLDDFLRPDGRPAMSVLDLGESWRVYHADWKCDSGCVDNCTQCDAA
TEALYFGSDYCGFLNKTDGPLWECGTVVDPTAFVHSCVYDLCSVRDNGTLLCQAIQAYALVCQALGIPIGDWRTQTGCVSTVQCPSFSHY
SVCTSSCPDTCSDLTASRNCATPCTEGCECNQGFVLSTSQCVPLHKCGCDFDGHYYTMGEFFWATANCTVQCLCEEGGDVYCFNKTCGSG
EVCAVEDGYQGCFPKRETVCLLSQNQVLHTFDGASYAFPSEFSYTLLKTCPERPEYLEIDINKKKPDAGPAWLRGLRILVADQEVKIGGI
GASEVKLNGQEVELPFFHPSGKLEIYRNKNSTTVESKGVVTVQYSDIGLLYIRLSTTYFNCTGGLCGFYNANASDEFCLPNGKCTDNLAV
FLESWTTFEEICNGECGDLLKACNNDSELLKFYRSRSRCGIINDPSNSSFLECHGVVNVTAYYRTCLFRLCQSGGNESELCDSVARYASA
CKNADVEVGPWRTYDFCRMASPAAGCGLRVSHLVAPQWSAETPRRITTTAVPSPPTPGAPRPPATPSPPPPPQPTTTMSLPPRGARRAAR

--------------------------------------------------------------
>In-frame_ENST00000392793_ENST00000557258_TCGA-RW-A688-01A_TECTA_chr11_121000920_+_FOXN3_chr14_89629313_length(transcript)=4797nt_BP=3212nt
CGCAATCCTGAAACTGATCTTTAGATTTACTTTTCCTTAATCAATAGAAAAAAACTTGATTGCAGCTCAACACTTACCTGTCTCTAGTGC
AGGACTAACTTAATTTTTGGTTTTAAGAGTACGAGATTCAGACATTATTTCAGGAATCAGAAATTATTGGCAACAAGTTGAGGAGAACTG
ACATGAATTCTTGTTTTACCTAATTTTTTCTGGCTTACCAAGATTTGGCTTAATATTTCTGACTCAGTTCCTCCAGCCTCTACAGAACAG
GATGAATTATTCATCATTCCTTAGAATTTGGGTCTCTTTCATCTTCGCACTTGTACAGCACCAAGCTCAGCCCAGGGAGCTCATGTATCC
ATTTTGGCAGAATGACACCAAAACCCCTAAAGTAGATGATGGAAGCTCATCTGAGATTAAGTTGGCCATCCCAGTTTTCTTCTTTGGCGT
TCCTTACCGCACTGTCTATGTCAATAACAACGGAGTTGTTTCCTTCAATGTGCTAGTGAGCCAGTTCACGCCAGAATCCTTTCCCCTGAC
AGATGGGAGAGCCTTCGTCGCCCCATTTTGGGCAGATGTGCACAATGGAATTCGAGGCGAGATCTATTACAGAGAGACCATGGAGCCTGC
CATCTTGAAAAGAGCCACCAAGGACATCAGGAAGTACTTCAAAGACATGGCAACCTTCTCTGCCACTTGGGTTTTCATTGTGACATGGGA
GGAAGTCACGTTTTATGGAGGCAGCAGCACCACACCTGTGAACACCTTCCAGGCCGTCCTAGTGTCCGATGGCTCCTATACATTCACCCT
CTTCAATTATTACGAAATCAACTGGACCACGGGGACGGCGAGTGGCGGCGACCCCCTGACAGGTCTTGGTGGAGTGATGGCACAGGCAGG
ATTTAATGGTGGAAACCTCACCAATTTCTTCAGCCTCCCGGGGTCAAGAACCCCCGAGATCGTGAATATCCAGGAGACCACAAACGTCAA
TGTTCCAGGCCGCTGGGCATTTAAAGTTGATGGAAAGGAAATTGACCCAGCCAATGGCTGCACCTCAAGGGGACAATTCCTTCGGCGAGG
GGAGGTGTTTTGGGATGACTTGAACTGCACCGTCAAGTGCCGCTGTCTGGATTTCAACAATGAGATCTACTGCCAGGAGGCTTCCTGTAG
CCCCTACGAGGTGTGCGAACCCAAAGGCAAATTCTTCTACTGCAGCGCTGTGGAGACCAGCACATGCGTGGTGTTTGGGGAGCCACACTA
CCACACTTTTGACGGCTTCCTCTTCCACTTCCAAGGCTCCTGTGCCTACTTGCTGGCCCGACAGTGTTTGCAGACTTCCAGCCTCCCTTT
CTTCAGTGTGGAGGCCAAGAATGAACACCGCAGAGGTTCAGCCGTCTCCTGGGTGAAGGAGCTCTCAGTGGAGGTGAATGGCTACAAGAT
TCTCATCCCCAAAGGAAGCTATGGAAGAGTCAAGGTTAATGACCTAGTGACTTCTTTGCCTGTCACCTTAGACTTGGGGACAGTGAAAAT
CTACCAGAGTGGCATATCTACTGCCGTGGAAACAGATTTTGGGCTCTTAGTGACTTTTGATGGCCAGCACTACGCCTCCATTTCCGTCCC
AGGCTCCTATATAAACTCCACCTGTGGACTCTGTGGAAACTATAATAAAAACCCACTGGATGACTTCCTCCGCCCGGATGGCAGGCCGGC
CATGTCTGTCCTGGATCTGGGAGAGAGCTGGCGTGTGTACCACGCAGACTGGAAGTGCGACTCCGGCTGCGTCGACAACTGCACCCAGTG
CGACGCTGCCACTGAAGCCCTCTACTTTGGCTCTGACTACTGCGGCTTCCTCAACAAGACAGACGGCCCTCTGTGGGAGTGTGGCACTGT
CGTGGACCCCACTGCTTTTGTGCACAGCTGCGTGTATGACCTGTGCAGTGTGAGGGACAATGGCACGCTCCTCTGCCAAGCCATCCAGGC
CTATGCTCTTGTGTGCCAAGCCCTTGGCATTCCAATTGGAGACTGGCGAACCCAGACTGGGTGTGTGTCCACAGTGCAGTGCCCGAGCTT
CAGCCACTACTCCGTGTGCACAAGCAGCTGCCCCGACACATGCTCCGACCTGACGGCCTCGCGGAACTGCGCCACGCCGTGCACAGAGGG
CTGCGAGTGCAACCAGGGCTTCGTCCTCAGCACCAGCCAGTGCGTCCCTCTGCACAAGTGCGGCTGCGACTTCGACGGCCACTACTACAC
CATGGGGGAGTTCTTCTGGGCCACGGCCAACTGCACTGTGCAATGCCTGTGCGAGGAGGGCGGGGACGTCTACTGCTTCAACAAGACCTG
CGGCAGCGGGGAGGTGTGCGCCGTGGAGGACGGCTACCAGGGCTGCTTCCCCAAGCGGGAGACCGTGTGCCTGCTCAGCCAGAACCAGGT
GCTGCACACCTTTGACGGCGCCTCCTACGCCTTCCCCTCCGAGTTCTCCTACACCCTCCTGAAGACCTGCCCTGAGCGCCCAGAGTACTT
GGAAATCGACATCAACAAGAAGAAGCCCGATGCAGGACCTGCTTGGCTGCGGGGACTTCGGATCCTGGTGGCCGACCAGGAGGTCAAGAT
AGGAGGCATCGGGGCTTCGGAAGTCAAGTTGAATGGTCAGGAAGTGGAATTGCCTTTTTTCCATCCTTCGGGGAAGCTGGAAATTTATCG
AAACAAAAACAGTACGACAGTGGAGTCCAAGGGCGTGGTGACTGTCCAGTACTCAGACATAGGTCTATTGTACATCCGGCTGTCCACCAC
ATACTTCAATTGCACAGGGGGCTTGTGCGGCTTCTACAATGCCAACGCCAGTGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGGACAA
CCTGGCAGTGTTCCTGGAAAGCTGGACAACTTTCGAGGAGATCTGCAATGGAGAGTGTGGGGACCTGCTGAAGGCCTGCAACAATGACTC
GGAGCTGCTCAAGTTTTATCGAAGCCGCTCCAGGTGCGGCATCATCAACGACCCCTCCAACAGCTCCTTCCTGGAGTGCCATGGGGTGGT
GAACGTCACTGCCTATTACCGCACCTGCCTTTTCCGCCTGTGCCAGAGTGGGGGCAATGAGTCAGAGCTCTGTGACTCTGTGGCCCGGTA
TGCAAGCGCCTGCAAGAATGCGGACGTGGAGGTGGGGCCCTGGCGGACCTATGACTTCTGCCGAATGGCATCACCAGCTGCCGGATGCGG
ACTGAGAGTGAGCCATCTTGTGGCTCCCCAGTGGTCAGCGGAGACCCCAAGGAGGATCACAACTACAGCAGTGCCAAGTCCTCCAACGCC
CGGAGCACCTCGCCCACCAGCGACTCCATCTCCTCCTCCTCCTCCTCAGCCGACGACCACTATGAGTTTGCCACCAAGGGGAGCCAGGAG
GGCAGCGAGGGCAGCGAGGGGAGCTTCCGGAGCCACGAGAGCCCCAGCGACACGGAAGAGGACGACAGGAAGCACAGCCAGAAGGAGCCC
AAGGATTCTCTGGGGGACAGCGGGTACGCATCCCAGCACAAGAAGCGCCAGCACTTCGCCAAGGCCAGGAAGGTCCCCAGCGACACACTG
CCCCTCAAAAAGAGACGCACCGAAAAGCCCCCCGAGAGCGATGATGAGGAGATGAAAGAAGCGGCAGGGTCCCTCCTGCACTTAGCAGGG
ATCCGGTCCTGTTTGAATAACATCACCAATCGGACGGCAAAGGGGCAGAAAGAGCAAAAGGAAACCACAAAAAATTAAAAACAAGTCACT
GATTTGTTTTGAACTTACGACCATTTGGTTTCAGCATGTCAGGAGATTTCTAATGATTTGTGGCAATATCAGCAATTTTTTTTCTTTTTT
CTTGTTTTTGGTTTGGTTTTCTTTCTTTTCTTTTCCTTTTATTTTGTTTTAATTTGCCCCCTCTTCTTTGTTTTGGACCCTTAAGAATTT
TATTTTTAAAGGAGATTGAAGCCATAGAACTCATATTGACACTCAGCTGTTTTACAAAAGCTTTTCATTATCTGAAGACAAAACCGAAAA
AGCCAAAATTACCATTGCTTCCTCCAGCTTGTCAGAAACCTGTGGCTGAATCCGCAGGGATGTCAACGTCAATATCACAGGAACACACAT
TCGGCACCTAGAAGGCACGTGGGCAAAGTAATCATCGTTCAGGCCCAACCCTTAGGTTTAAAAAGTCAGGTTGTCCATCCCATTGGGTTC
ACTGAGTGAAGGCACATAAAGCAATTGAGGAGGAGGAGGAACCCCTCGTCCCCCTAGGAGCAGACCCAAGCTTGTGGCACCAGGCATCTG
ATGGTGCCAGGAAAGCCACTGGAATTGTCACACGGCGAGCACAGAGGGCCGGCCACCAGTCCTCGATGCTTCTGAACCCTGAAGCCCGAT
GACATCTTACGAGGTGGACGTTGGACTGTTCATGCGCATCGGGTGTCAGTGACTCATGGAGAAGAAATGGGGTAAATTTTTAGTGATGTT
GCTAATCATTGAATTCTGTTCTCTATTAAATTAAGAAAATGTTCCAAAAGCCATAAGCCTGAAGATTGGCCCTGTGCACGCACGCACACA
CACACACACACACACACACACACACACACACACACGAAGGAGAGAGAGAGAAAACTGATGGGGAAAACAAGCTGTGTCTTCTTAACTGCC
CAAGTGAAAAGCAACCAAGTCCAGGAAATTACAATAGCTGTTAAGGAAAGGAAATAATGGTACAGATCTTTTTCTGTCTATCAAAACTAT

>In-frame_ENST00000392793_ENST00000557258_TCGA-RW-A688-01A_TECTA_chr11_121000920_+_FOXN3_chr14_89629313_length(amino acids)=1154AA_start in transcript=190_stop in transcript=3654
MFYLIFSGLPRFGLIFLTQFLQPLQNRMNYSSFLRIWVSFIFALVQHQAQPRELMYPFWQNDTKTPKVDDGSSSEIKLAIPVFFFGVPYR
TVYVNNNGVVSFNVLVSQFTPESFPLTDGRAFVAPFWADVHNGIRGEIYYRETMEPAILKRATKDIRKYFKDMATFSATWVFIVTWEEVT
FYGGSSTTPVNTFQAVLVSDGSYTFTLFNYYEINWTTGTASGGDPLTGLGGVMAQAGFNGGNLTNFFSLPGSRTPEIVNIQETTNVNVPG
RWAFKVDGKEIDPANGCTSRGQFLRRGEVFWDDLNCTVKCRCLDFNNEIYCQEASCSPYEVCEPKGKFFYCSAVETSTCVVFGEPHYHTF
DGFLFHFQGSCAYLLARQCLQTSSLPFFSVEAKNEHRRGSAVSWVKELSVEVNGYKILIPKGSYGRVKVNDLVTSLPVTLDLGTVKIYQS
GISTAVETDFGLLVTFDGQHYASISVPGSYINSTCGLCGNYNKNPLDDFLRPDGRPAMSVLDLGESWRVYHADWKCDSGCVDNCTQCDAA
TEALYFGSDYCGFLNKTDGPLWECGTVVDPTAFVHSCVYDLCSVRDNGTLLCQAIQAYALVCQALGIPIGDWRTQTGCVSTVQCPSFSHY
SVCTSSCPDTCSDLTASRNCATPCTEGCECNQGFVLSTSQCVPLHKCGCDFDGHYYTMGEFFWATANCTVQCLCEEGGDVYCFNKTCGSG
EVCAVEDGYQGCFPKRETVCLLSQNQVLHTFDGASYAFPSEFSYTLLKTCPERPEYLEIDINKKKPDAGPAWLRGLRILVADQEVKIGGI
GASEVKLNGQEVELPFFHPSGKLEIYRNKNSTTVESKGVVTVQYSDIGLLYIRLSTTYFNCTGGLCGFYNANASDEFCLPNGKCTDNLAV
FLESWTTFEEICNGECGDLLKACNNDSELLKFYRSRSRCGIINDPSNSSFLECHGVVNVTAYYRTCLFRLCQSGGNESELCDSVARYASA
CKNADVEVGPWRTYDFCRMASPAAGCGLRVSHLVAPQWSAETPRRITTTAVPSPPTPGAPRPPATPSPPPPPQPTTTMSLPPRGARRAAR

--------------------------------------------------------------
>In-frame_ENST00000264037_ENST00000261302_TCGA-RW-A688-01A_TECTA_chr11_121000920_+_FOXN3_chr14_89629313_length(transcript)=9726nt_BP=2941nt
ATGAATTATTCATCATTCCTTAGAATTTGGGTCTCTTTCATCTTCGCACTTGTACAGCACCAAGCTCAGCCCAGGGAGCTCATGTATCCA
TTTTGGCAGAATGACACCAAAACCCCTAAAGTAGATGATGGAAGCTCATCTGAGATTAAGTTGGCCATCCCAGTTTTCTTCTTTGGCGTT
CCTTACCGCACTGTCTATGTCAATAACAACGGAGTTGTTTCCTTCAATGTGCTAGTGAGCCAGTTCACGCCAGAATCCTTTCCCCTGACA
GATGGGAGAGCCTTCGTCGCCCCATTTTGGGCAGATGTGCACAATGGAATTCGAGGCGAGATCTATTACAGAGAGACCATGGAGCCTGCC
ATCTTGAAAAGAGCCACCAAGGACATCAGGAAGTACTTCAAAGACATGGCAACCTTCTCTGCCACTTGGGTTTTCATTGTGACATGGGAG
GAAGTCACGTTTTATGGAGGCAGCAGCACCACACCTGTGAACACCTTCCAGGCCGTCCTAGTGTCCGATGGCTCCTATACATTCACCCTC
TTCAATTATTACGAAATCAACTGGACCACGGGGACGGCGAGTGGCGGCGACCCCCTGACAGGTCTTGGTGGAGTGATGGCACAGGCAGGA
TTTAATGGTGGAAACCTCACCAATTTCTTCAGCCTCCCGGGGTCAAGAACCCCCGAGATCGTGAATATCCAGGAGACCACAAACGTCAAT
GTTCCAGGCCGCTGGGCATTTAAAGTTGATGGAAAGGAAATTGACCCAGCCAATGGCTGCACCTCAAGGGGACAATTCCTTCGGCGAGGG
GAGGTGTTTTGGGATGACTTGAACTGCACCGTCAAGTGCCGCTGTCTGGATTTCAACAATGAGATCTACTGCCAGGAGGCTTCCTGTAGC
CCCTACGAGGTGTGCGAACCCAAAGGCAAATTCTTCTACTGCAGCGCTGTGGAGACCAGCACATGCGTGGTGTTTGGGGAGCCACACTAC
CACACTTTTGACGGCTTCCTCTTCCACTTCCAAGGCTCCTGTGCCTACTTGCTGGCCCGACAGTGTTTGCAGACTTCCAGCCTCCCTTTC
TTCAGTGTGGAGGCCAAGAATGAACACCGCAGAGGTTCAGCCGTCTCCTGGGTGAAGGAGCTCTCAGTGGAGGTGAATGGCTACAAGATT
CTCATCCCCAAAGGAAGCTATGGAAGAGTCAAGGTTAATGACCTAGTGACTTCTTTGCCTGTCACCTTAGACTTGGGGACAGTGAAAATC
TACCAGAGTGGCATATCTACTGCCGTGGAAACAGATTTTGGGCTCTTAGTGACTTTTGATGGCCAGCACTACGCCTCCATTTCCGTCCCA
GGCTCCTATATAAACTCCACCTGTGGACTCTGTGGAAACTATAATAAAAACCCACTGGATGACTTCCTCCGCCCGGATGGCAGGCCGGCC
ATGTCTGTCCTGGATCTGGGAGAGAGCTGGCGTGTGTACCACGCAGACTGGAAGTGCGACTCCGGCTGCGTCGACAACTGCACCCAGTGC
GACGCTGCCACTGAAGCCCTCTACTTTGGCTCTGACTACTGCGGCTTCCTCAACAAGACAGACGGCCCTCTGTGGGAGTGTGGCACTGTC
GTGGACCCCACTGCTTTTGTGCACAGCTGCGTGTATGACCTGTGCAGTGTGAGGGACAATGGCACGCTCCTCTGCCAAGCCATCCAGGCC
TATGCTCTTGTGTGCCAAGCCCTTGGCATTCCAATTGGAGACTGGCGAACCCAGACTGGGTGTGTGTCCACAGTGCAGTGCCCGAGCTTC
AGCCACTACTCCGTGTGCACAAGCAGCTGCCCCGACACATGCTCCGACCTGACGGCCTCGCGGAACTGCGCCACGCCGTGCACAGAGGGC
TGCGAGTGCAACCAGGGCTTCGTCCTCAGCACCAGCCAGTGCGTCCCTCTGCACAAGTGCGGCTGCGACTTCGACGGCCACTACTACACC
ATGGGGGAGTTCTTCTGGGCCACGGCCAACTGCACTGTGCAATGCCTGTGCGAGGAGGGCGGGGACGTCTACTGCTTCAACAAGACCTGC
GGCAGCGGGGAGGTGTGCGCCGTGGAGGACGGCTACCAGGGCTGCTTCCCCAAGCGGGAGACCGTGTGCCTGCTCAGCCAGAACCAGGTG
CTGCACACCTTTGACGGCGCCTCCTACGCCTTCCCCTCCGAGTTCTCCTACACCCTCCTGAAGACCTGCCCTGAGCGCCCAGAGTACTTG
GAAATCGACATCAACAAGAAGAAGCCCGATGCAGGACCTGCTTGGCTGCGGGGACTTCGGATCCTGGTGGCCGACCAGGAGGTCAAGATA
GGAGGCATCGGGGCTTCGGAAGTCAAGTTGAATGGTCAGGAAGTGGAATTGCCTTTTTTCCATCCTTCGGGGAAGCTGGAAATTTATCGA
AACAAAAACAGTACGACAGTGGAGTCCAAGGGCGTGGTGACTGTCCAGTACTCAGACATAGGTCTATTGTACATCCGGCTGTCCACCACA
TACTTCAATTGCACAGGGGGCTTGTGCGGCTTCTACAATGCCAACGCCAGTGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGGACAAC
CTGGCAGTGTTCCTGGAAAGCTGGACAACTTTCGAGGAGATCTGCAATGGAGAGTGTGGGGACCTGCTGAAGGCCTGCAACAATGACTCG
GAGCTGCTCAAGTTTTATCGAAGCCGCTCCAGGTGCGGCATCATCAACGACCCCTCCAACAGCTCCTTCCTGGAGTGCCATGGGGTGGTG
AACGTCACTGCCTATTACCGCACCTGCCTTTTCCGCCTGTGCCAGAGTGGGGGCAATGAGTCAGAGCTCTGTGACTCTGTGGCCCGGTAT
GCAAGCGCCTGCAAGAATGCGGACGTGGAGGTGGGGCCCTGGCGGACCTATGACTTCTGCCGAATGGCATCACCAGCTGCCGGATGCGGA
CTGAGAGTGAGCCATCTTGTGGCTCCCCAGTGGTCAGCGGAGACCCCAAGGAGGATCACAACTACAGCAGTGCCAAGTCCTCCAACGCCC
GGAGCACCTCGCCCACCAGCGACTCCATCTCCTCCTCCTCCTCCTCAGCCGACGACCACTATGAGTTTGCCACCAAGGGGAGCCAGGAGG
GCAGCGAGGGCAGCGAGGGGAGCTTCCGGAGCCACGAGAGCCCCAGCGACACGGAAGAGGACGACAGGAAGCACAGCCAGAAGGAGCCCA
AGGATTCTCTGGGGGACAGCGGGTACGCATCCCAGCACAAGAAGCGCCAGCACTTCGCCAAGGCCAGGAAGGTCCCCAGCGACACACTGC
CCCTCAAAAAGAGACGCACCGAAAAGCCCCCCGAGAGCGATGATGAGGAGATGAAAGAAGCGGCAGGGTCCCTCCTGCACTTAGCAGGGA
TCCGGTCCTGTTTGAATAACATCACCAATCGGACGGCAAAGGGGCAGAAAGAGCAAAAGGAAACCACAAAAAATTAAAAACAAGTCACTG
ATTTGTTTTGAACTTACGACCATTTGGTTTCAGCATGTCAGGAGATTTCTAATGATTTGTGGCAATATCAGCAATTTTTTTTCTTTTTTC
TTGTTTTTGGTTTGGTTTTCTTTCTTTTCTTTTCCTTTTATTTTGTTTTAATTTGCCCCCTCTTCTTTGTTTTGGACCCTTAAGAATTTT
ATTTTTAAAGGAGATTGAAGCCATAGAACTCATATTGACACTCAGCTGTTTTACAAAAGCTTTTCATTATCTGAAGACAAAACCGAAAAA
GCCAAAATTACCATTGCTTCCTCCAGCTTGTCAGAAACCTGTGGCTGAATCCGCAGGGATGTCAACGTCAATATCACAGGAACACACATT
CGGCACCTAGAAGGCACGTGGGCAAAGTAATCATCGTTCAGGCCCAACCCTTAGGTTTAAAAAGTCAGGTTGTCCATCCCATTGGGTTCA
CTGAGTGAAGGCACATAAAGCAATTGAGGAGGAGGAGGAACCCCTCGTCCCCCTAGGAGCAGACCCAAGCTTGTGGCACCAGGCATCTGA
TGGTGCCAGGAAAGCCACTGGAATTGTCACACGGCGAGCACAGAGGGCCGGCCACCAGTCCTCGATGCTTCTGAACCCTGAAGCCCGATG
ACATCTTACGAGGTGGACGTTGGACTGTTCATGCGCATCGGGTGTCAGTGACTCATGGAGAAGAAATGGGGTAAATTTTTAGTGATGTTG
CTAATCATTGAATTCTGTTCTCTATTAAATTAAGAAAATGTTCCAAAAGCCATAAGCCTGAAGATTGGCCCTGTGCACGCACGCACACAC
ACACACACACACACACACACACACACACACACACGAAGGAGAGAGAGAGAAAACTGATGGGGAAAACAAGCTGTGTCTTCTTAACTGCCC
AAGTGAAAAGCAACCAAGTCCAGGAAATTACAATAGCTGTTAAGGAAAGGAAATAATGGTACAGATCTTTTTCTGTCTATCAAAACTATT
TGATCCAAGTGAAAAAAAAAAAAAAACTAGAAAGCTACGGAACCTGCCATTAGTATTGTGGTGTATTTTTAAGATTAAAGGTACACTGAT
GGACAAAAAAAAAAAGTAAAACATGGCAAAAAATAAAATAACTCCTATACTGCCCTCAAAATGGAGTTTGCAATTAATATCAGGATTTAT
CTTTGCAAAAATCAGTGATTTCCACATTCAGCCAGTATAGCCAGCAGAAATTTCTGATCCACAATGCATGGATTCCTTTGAAGAAAAAAA
AGAAAAAGAGAAAAAAATCACAAAAACAAACTTTTTTTATTCAAAAGTAACAAAGTTCTTGTAAGGTAAATAATGTATTTAGCATGAAGC
ATGAATTATTTTCATATAAATATAGAAAATAGAGAAAAGGCTATGCCTGTAATTTTTAAGCCCTTAGGCTTAGAGTTTCTTTTGGTTTTC
TTCTTTTTTCTTTCCTTTTCTTTGCTTTCTTTTTTTCCTTTTTGTTTTTGTTTTTGTTTTTTGTTTTTGTTTTTTTTTCGGGTTATTTTG
TTTTGGTTTTTTGAAGCAGGTGTTTAAGGTTTAACCTTCTTCAGGGACAAATTCTGACTGTTGGGGAACTTACTCTGCAATATAAAAATA
TCTTCATGCTCTGGTAGGGCTTGGATGGTTGAACTCTGTACTGCCTTGTGTGCACTTCAGCCCCGACCCCCTCTGATTCTCTGTTGAAAA
GTGTGTCCTTTCTCTCTGTCTGTACATGTTTAACATGACGCAATAATTTGAGGGCAAACTTAGTAGTGAGTGTGTATGATAGAATCAAGA
GAATTATGGGACGCTTACTTGAGAAAATCATTACCATGATTTGGTTCTAGGAAAAAGGCAGTGAATAATTATGCAAATTAGCCAGAAGAA
GGGGAACCGTGCTAATGGGCCTTATTGGGTGAGGGGACGAGATGGGGTTCATGTGAAGGAGGAAGCGATGCCGAGGTAGGAAAGGCCAGC
CCCAGACATCCTATCGCCACAATGCCATGTCGCAATAGGAAGCAGGGGCCGGCCATCGCTACCTTCAGCACACTGACCAACCTGGAATTA
AGACCACCTAGATTGCGAGAGCTGAATTTAGAAACCAGACAACGTCATGCAGCCCAGAAACTCCTGTTGTTACCTTTGCCTAAGAAATTT
TCTTTAATGGCGGGGGCGGGGGGCGGGGGTACAAAGAGAAATCTCTAAAAGAATATGATCTTCCATCCAAGTGGAGGGAAACTTTAAAAC
AAAAACACCCAGTACTGTGGCTCAGGATATGATGCGTGAGGAGAGGGAGGGAACAGAGATGACCTTAACTTTTAAAAAAGGGACTGCTGT
GGGCCAAAGCCAAGCCCATCTGCCAGGACGAGGTAATGTCAGAGCTCCATCAGCCCGGACAGTGGGAACTAACTGGTGCATTCCCCACAC
TTACCTTCCGGTGGGTTGCTGATGAGAGAACCTGAAAAAACCTACACCTCTACAGCAGGTCGAATTCATGACCTGAAGCTGAATACTTCC
AGCATATTTATTCAGGGTGTAGGTGGGAATAAAGTATCTTCGCAGTGCTCTGTTCCCTCCGTCTCCCCAGACATCTGACACCCTAAAAGC
CATCCACAGCTATGGAACCTGAGCGACACCTTGATTTGTGTTGTCACCTGACCAAGCCTAAAGACCTCCAGCTCAGTCCCCCACCTTCAT
CCCACCCCACAGATGATAAAATTCAGACCTCTCTCCTGAAAGGCAGAGGTTCAACATTCAGGACTGTTTCTGGCCGAGGACTTCTTCCAA
TTAAAACCCCCACCGTGGGCTGTCTCCCCTCATTTCATTTTTCTAAAGGGGCAGAGGCCTCTTTTAGAAAATAATAAAATGCAATGTGTG
TGATTTACTTTTCTGATCTCTTTGAGAAATAGAGAAATATAAAAGTGTGTTCTTAACTCCAGAACCACTCTTTTTGCATAAATACCTCAT
CGGGCAGCTTTCTAAGTGTGATTTTCCTGAGTCTCCCTTCGTTGGATCTGCCGGAAGACTTGTCGGGGAACCTTTAGTGAGGGTACTTCT
TCCTATTTTTCTTCTGTTTTTGGAGGCATACACATTATGCATAACCAAAACAATGGCTCAATTGTGTTTAACTTTGTATTTTGATTGTTG
AGAACAAAAACAAAAAGTATCAATGTGTATGTGGCTGTTTGTAGTGAATTTATTGGAGAATGAGGTTGTCCGTGTCCTTAACAAGCCAAG
GGGCAGGAGGCACCCTCTCTTATCCCCTCCTCCAAGAGCAGTAGAGAATTTAAGCACAAGCCTATTTGTGAAAGAATATTTTGCTTAAGT
GTCATTCACTTTAGTCTTGGAATTCCTTCCCAAACGTCAGGTGTTCTTTTAGCTTCCAAACTAGCATATGTATCCATTAGTCTGACAGAT
CGCCTGAACACCATTAAGAGGTGTGGCGTTTTTGCTTTCATTTCTCCTGCTGGGAGAAGTGGCGGTTCATGTGTCATTCCAGTATCTCAC
ATACTCACACGGGGCAGGGGGGAGGGGGAAACGGGGAACTATAGCAATATTTAAAGATGCTTTGGAAACCAACCGTGAACACATCAACAC
CACGACGTCTACGATTACTTGCTATTGGCCCTCGGATACATTTAAGAGAAAGAGACAGTCACTCTTTTTTTTCTTAAATGATATACATAT
AAACAGTTATTTTTATCCTATTATAATTGTCTTTTGTCTTTATCTAGTACTATGTGGAAAGGGTTTGCATCATAGATTTTTCCCAGCCTT
ATAATATACCATAAGCTCCTACTTCCCTGCCCCTCCCTAATCAGTATTCTTTCAAGAGTTCTTTGGTGAAGCCATCTATCTGAAACTAAA
ATGAACCAAACCCATATTTCACTGGTGGTTGGAGAAAACCATGGCCAAAACGATTGTGGCAGGTCTCAATCTTGGGAGTTTTTAAGAAGG
AATGTGCCAGAGGCCGATTCCCAAGAACAGAGTTTTCTTTTGTTTTGCAGAGGCATTCAATGTGTCTAGTGCTTGCTGGCCACAGCAGTT
ACTACCACAGAGCCTTCTGGGAGGGGCCGTTGTGTTGAAGGAGGCTCCTGCCTGAGGGACAGCATCAGGCAGTGGGCTCTGTAGAGTGAG
AACCAGGTGGAGGCCTTCTGTGCCCAGCTCAGAGTTCTGCACCACGCCAGGACTGCCCAGGCCAAGGGCTACTGACGCAAGTTCCACTCA
TTCCACTCTGTGGGGGGCGCCTTGGGCCTCTCCTGGAAGGGCTCTTGGAGAAGGAATTGGAGTTACGTACAAGTGACCTAAATGGGAAGC
TTTTCTAGATGAGATTGGATTAAATTCCATGTGATTTCTCTTTCCCTTTAATCCAGGTTGGGACTCGTTTCTTTCTGGTGGATCACAGCT
GCCCAGATGTTGCAATTGATTTTTATGTTTCTGTAGAGAAGTATTTTTCTTTCATCTTCAGGATTTTTTTTGCCACCAAAAGAAAACATT
GGAACTCTGTGTTTCCTCTTGATTGTGACTTCCCAGTGTTGACAGTTAAGTCCTTAGTGTCGTAGGTCCCAGCCCACCAATACTATATCA
AACACTGTTATGCACATAATGCAGCACTGTGATCTAATTTAAATAATACTTTTTTATTATTTATACTACTATATATAATATACATCAACA
CTTTTGCTATATAACCTAAGTGATAACCCTCTTTTAGTTACCTGCCAAACTCTGGACTTGGTTTATATTGCAGTTAACACAGTTACAAAG
CTGTAATGGTGTCTTTTTTTCCTTTGTAACGGAATGTGTAAATCAAAGTATATACATTGTGTGGTGTTCCTGTTTCTGGAGTTTCATGAG
GATTTACACATGGCATTCAGTGTTCTGTATAGATCTGCCTACCTTTGTGAATTCATCTGTTAACCCCTCTTCCTTTGAGAGAGCACCGGC
GATGGTGGTTAACTCCTTGTGTTTTCTCTCTCTCCTACTGGTTATTCTTGAATTAAGCACAGACTCGTCAGCTCGGTTGCTTTATCATGA
ATAATGTGTGTGACCTTGCAGTTCTTCCACAGTTCAGCAAACAAGTGCTAGCTTCACTGACCAAAAATTAAGGAAGGAAAACACAGTTTT
TAAAACGATCCATCTTTTAACAGCCGAAACCGATGTGTCTATGGTGCTGCACCTTGCTGTTGTACTTCTGAAATCAGACGTGTGTGAACG
ATCATTTCTGACTTAACCGTGAGATGCTCACGAGTACCCTTCCTGTTGTTTTGTTAGCATTGAAATCGAGACTATTTATTTGGAATATAT
ACAACAGTGTTTTTCCACTGTATTTCATTTGCAAAAGTTGAGAACTGCTTTCTCTACCTTTTGCAAAATAATTGATATTCCATATTGGAT
TCTCAAAGACTTCGATATGGTGAACCTATTAAACCTAGAAATTGTATTCATCCTTTCATGACTGTGGCCTGAGTTCCCCAGCCCCTCTCC
TCCTTTTTTTTAGATGAGATTTAGCACACTCTCAGTTATTTAAACATGCAACATTTCTTGAGTATGTATGTTGAGGCCATCTGAGCTCAT
AGCTGATTCAGTAACCAGTTTCATGCTGTGTCATTCACACTCACTACTTAATACTGCCATGGTGAAAATGTGGAGGAAAAATGTATCCAT
GTGTGTCTGGGAAGCATATACACTTGTACATTTTTTAATACTCTGATTCTGTAACATTTCTGAGTTTTGTTTTGTTTTACAGAAAAAAAA
AAAAAGTGATAAAGCAATCAGAAGACCAAGAGGTTTACTATTGATGCTTAGGGTCGTCTGACCTTGGCTGGCCAATAGACCTACACGGCC
AAATTAATTTACGAGAGTAATAATTTTTCAAAAGCCAATTTTTTTTCTGTATTTTCTGTATGAAACTGCCAATATCATGAATAGAAAGGG
AGAACCATAAAGGAGAAAGAACGTGATGTTCTGTTATGTTCATGTAAACCTAAAGAAACAGTGTGGAGGCAGGCGCGATCAGCCGAACTC
TAGGGACTTGGTGTTGCTTGGAAGGCATCCATACCTGCATTTTGCATTCTTCGTATGTAATCATATTGCCAAAGACAAACTATTTCATCA
TTTATTGTAAATAACACTTTTCCCCAGACCTACCATAAAGTTTCTGTGATGTATTGTCTTCCAGTTGCAATAAAAATTACTGAGTTGCAT

>In-frame_ENST00000264037_ENST00000261302_TCGA-RW-A688-01A_TECTA_chr11_121000920_+_FOXN3_chr14_89629313_length(amino acids)=1127AA_start in transcript=0_stop in transcript=3383
MNYSSFLRIWVSFIFALVQHQAQPRELMYPFWQNDTKTPKVDDGSSSEIKLAIPVFFFGVPYRTVYVNNNGVVSFNVLVSQFTPESFPLT
DGRAFVAPFWADVHNGIRGEIYYRETMEPAILKRATKDIRKYFKDMATFSATWVFIVTWEEVTFYGGSSTTPVNTFQAVLVSDGSYTFTL
FNYYEINWTTGTASGGDPLTGLGGVMAQAGFNGGNLTNFFSLPGSRTPEIVNIQETTNVNVPGRWAFKVDGKEIDPANGCTSRGQFLRRG
EVFWDDLNCTVKCRCLDFNNEIYCQEASCSPYEVCEPKGKFFYCSAVETSTCVVFGEPHYHTFDGFLFHFQGSCAYLLARQCLQTSSLPF
FSVEAKNEHRRGSAVSWVKELSVEVNGYKILIPKGSYGRVKVNDLVTSLPVTLDLGTVKIYQSGISTAVETDFGLLVTFDGQHYASISVP
GSYINSTCGLCGNYNKNPLDDFLRPDGRPAMSVLDLGESWRVYHADWKCDSGCVDNCTQCDAATEALYFGSDYCGFLNKTDGPLWECGTV
VDPTAFVHSCVYDLCSVRDNGTLLCQAIQAYALVCQALGIPIGDWRTQTGCVSTVQCPSFSHYSVCTSSCPDTCSDLTASRNCATPCTEG
CECNQGFVLSTSQCVPLHKCGCDFDGHYYTMGEFFWATANCTVQCLCEEGGDVYCFNKTCGSGEVCAVEDGYQGCFPKRETVCLLSQNQV
LHTFDGASYAFPSEFSYTLLKTCPERPEYLEIDINKKKPDAGPAWLRGLRILVADQEVKIGGIGASEVKLNGQEVELPFFHPSGKLEIYR
NKNSTTVESKGVVTVQYSDIGLLYIRLSTTYFNCTGGLCGFYNANASDEFCLPNGKCTDNLAVFLESWTTFEEICNGECGDLLKACNNDS
ELLKFYRSRSRCGIINDPSNSSFLECHGVVNVTAYYRTCLFRLCQSGGNESELCDSVARYASACKNADVEVGPWRTYDFCRMASPAAGCG
LRVSHLVAPQWSAETPRRITTTAVPSPPTPGAPRPPATPSPPPPPQPTTTMSLPPRGARRAARAARGASGATRAPATRKRTTGSTARRSP

--------------------------------------------------------------
>In-frame_ENST00000264037_ENST00000557258_TCGA-RW-A688-01A_TECTA_chr11_121000920_+_FOXN3_chr14_89629313_length(transcript)=4526nt_BP=2941nt
ATGAATTATTCATCATTCCTTAGAATTTGGGTCTCTTTCATCTTCGCACTTGTACAGCACCAAGCTCAGCCCAGGGAGCTCATGTATCCA
TTTTGGCAGAATGACACCAAAACCCCTAAAGTAGATGATGGAAGCTCATCTGAGATTAAGTTGGCCATCCCAGTTTTCTTCTTTGGCGTT
CCTTACCGCACTGTCTATGTCAATAACAACGGAGTTGTTTCCTTCAATGTGCTAGTGAGCCAGTTCACGCCAGAATCCTTTCCCCTGACA
GATGGGAGAGCCTTCGTCGCCCCATTTTGGGCAGATGTGCACAATGGAATTCGAGGCGAGATCTATTACAGAGAGACCATGGAGCCTGCC
ATCTTGAAAAGAGCCACCAAGGACATCAGGAAGTACTTCAAAGACATGGCAACCTTCTCTGCCACTTGGGTTTTCATTGTGACATGGGAG
GAAGTCACGTTTTATGGAGGCAGCAGCACCACACCTGTGAACACCTTCCAGGCCGTCCTAGTGTCCGATGGCTCCTATACATTCACCCTC
TTCAATTATTACGAAATCAACTGGACCACGGGGACGGCGAGTGGCGGCGACCCCCTGACAGGTCTTGGTGGAGTGATGGCACAGGCAGGA
TTTAATGGTGGAAACCTCACCAATTTCTTCAGCCTCCCGGGGTCAAGAACCCCCGAGATCGTGAATATCCAGGAGACCACAAACGTCAAT
GTTCCAGGCCGCTGGGCATTTAAAGTTGATGGAAAGGAAATTGACCCAGCCAATGGCTGCACCTCAAGGGGACAATTCCTTCGGCGAGGG
GAGGTGTTTTGGGATGACTTGAACTGCACCGTCAAGTGCCGCTGTCTGGATTTCAACAATGAGATCTACTGCCAGGAGGCTTCCTGTAGC
CCCTACGAGGTGTGCGAACCCAAAGGCAAATTCTTCTACTGCAGCGCTGTGGAGACCAGCACATGCGTGGTGTTTGGGGAGCCACACTAC
CACACTTTTGACGGCTTCCTCTTCCACTTCCAAGGCTCCTGTGCCTACTTGCTGGCCCGACAGTGTTTGCAGACTTCCAGCCTCCCTTTC
TTCAGTGTGGAGGCCAAGAATGAACACCGCAGAGGTTCAGCCGTCTCCTGGGTGAAGGAGCTCTCAGTGGAGGTGAATGGCTACAAGATT
CTCATCCCCAAAGGAAGCTATGGAAGAGTCAAGGTTAATGACCTAGTGACTTCTTTGCCTGTCACCTTAGACTTGGGGACAGTGAAAATC
TACCAGAGTGGCATATCTACTGCCGTGGAAACAGATTTTGGGCTCTTAGTGACTTTTGATGGCCAGCACTACGCCTCCATTTCCGTCCCA
GGCTCCTATATAAACTCCACCTGTGGACTCTGTGGAAACTATAATAAAAACCCACTGGATGACTTCCTCCGCCCGGATGGCAGGCCGGCC
ATGTCTGTCCTGGATCTGGGAGAGAGCTGGCGTGTGTACCACGCAGACTGGAAGTGCGACTCCGGCTGCGTCGACAACTGCACCCAGTGC
GACGCTGCCACTGAAGCCCTCTACTTTGGCTCTGACTACTGCGGCTTCCTCAACAAGACAGACGGCCCTCTGTGGGAGTGTGGCACTGTC
GTGGACCCCACTGCTTTTGTGCACAGCTGCGTGTATGACCTGTGCAGTGTGAGGGACAATGGCACGCTCCTCTGCCAAGCCATCCAGGCC
TATGCTCTTGTGTGCCAAGCCCTTGGCATTCCAATTGGAGACTGGCGAACCCAGACTGGGTGTGTGTCCACAGTGCAGTGCCCGAGCTTC
AGCCACTACTCCGTGTGCACAAGCAGCTGCCCCGACACATGCTCCGACCTGACGGCCTCGCGGAACTGCGCCACGCCGTGCACAGAGGGC
TGCGAGTGCAACCAGGGCTTCGTCCTCAGCACCAGCCAGTGCGTCCCTCTGCACAAGTGCGGCTGCGACTTCGACGGCCACTACTACACC
ATGGGGGAGTTCTTCTGGGCCACGGCCAACTGCACTGTGCAATGCCTGTGCGAGGAGGGCGGGGACGTCTACTGCTTCAACAAGACCTGC
GGCAGCGGGGAGGTGTGCGCCGTGGAGGACGGCTACCAGGGCTGCTTCCCCAAGCGGGAGACCGTGTGCCTGCTCAGCCAGAACCAGGTG
CTGCACACCTTTGACGGCGCCTCCTACGCCTTCCCCTCCGAGTTCTCCTACACCCTCCTGAAGACCTGCCCTGAGCGCCCAGAGTACTTG
GAAATCGACATCAACAAGAAGAAGCCCGATGCAGGACCTGCTTGGCTGCGGGGACTTCGGATCCTGGTGGCCGACCAGGAGGTCAAGATA
GGAGGCATCGGGGCTTCGGAAGTCAAGTTGAATGGTCAGGAAGTGGAATTGCCTTTTTTCCATCCTTCGGGGAAGCTGGAAATTTATCGA
AACAAAAACAGTACGACAGTGGAGTCCAAGGGCGTGGTGACTGTCCAGTACTCAGACATAGGTCTATTGTACATCCGGCTGTCCACCACA
TACTTCAATTGCACAGGGGGCTTGTGCGGCTTCTACAATGCCAACGCCAGTGACGAGTTCTGTCTCCCCAACGGCAAGTGCACGGACAAC
CTGGCAGTGTTCCTGGAAAGCTGGACAACTTTCGAGGAGATCTGCAATGGAGAGTGTGGGGACCTGCTGAAGGCCTGCAACAATGACTCG
GAGCTGCTCAAGTTTTATCGAAGCCGCTCCAGGTGCGGCATCATCAACGACCCCTCCAACAGCTCCTTCCTGGAGTGCCATGGGGTGGTG
AACGTCACTGCCTATTACCGCACCTGCCTTTTCCGCCTGTGCCAGAGTGGGGGCAATGAGTCAGAGCTCTGTGACTCTGTGGCCCGGTAT
GCAAGCGCCTGCAAGAATGCGGACGTGGAGGTGGGGCCCTGGCGGACCTATGACTTCTGCCGAATGGCATCACCAGCTGCCGGATGCGGA
CTGAGAGTGAGCCATCTTGTGGCTCCCCAGTGGTCAGCGGAGACCCCAAGGAGGATCACAACTACAGCAGTGCCAAGTCCTCCAACGCCC
GGAGCACCTCGCCCACCAGCGACTCCATCTCCTCCTCCTCCTCCTCAGCCGACGACCACTATGAGTTTGCCACCAAGGGGAGCCAGGAGG
GCAGCGAGGGCAGCGAGGGGAGCTTCCGGAGCCACGAGAGCCCCAGCGACACGGAAGAGGACGACAGGAAGCACAGCCAGAAGGAGCCCA
AGGATTCTCTGGGGGACAGCGGGTACGCATCCCAGCACAAGAAGCGCCAGCACTTCGCCAAGGCCAGGAAGGTCCCCAGCGACACACTGC
CCCTCAAAAAGAGACGCACCGAAAAGCCCCCCGAGAGCGATGATGAGGAGATGAAAGAAGCGGCAGGGTCCCTCCTGCACTTAGCAGGGA
TCCGGTCCTGTTTGAATAACATCACCAATCGGACGGCAAAGGGGCAGAAAGAGCAAAAGGAAACCACAAAAAATTAAAAACAAGTCACTG
ATTTGTTTTGAACTTACGACCATTTGGTTTCAGCATGTCAGGAGATTTCTAATGATTTGTGGCAATATCAGCAATTTTTTTTCTTTTTTC
TTGTTTTTGGTTTGGTTTTCTTTCTTTTCTTTTCCTTTTATTTTGTTTTAATTTGCCCCCTCTTCTTTGTTTTGGACCCTTAAGAATTTT
ATTTTTAAAGGAGATTGAAGCCATAGAACTCATATTGACACTCAGCTGTTTTACAAAAGCTTTTCATTATCTGAAGACAAAACCGAAAAA
GCCAAAATTACCATTGCTTCCTCCAGCTTGTCAGAAACCTGTGGCTGAATCCGCAGGGATGTCAACGTCAATATCACAGGAACACACATT
CGGCACCTAGAAGGCACGTGGGCAAAGTAATCATCGTTCAGGCCCAACCCTTAGGTTTAAAAAGTCAGGTTGTCCATCCCATTGGGTTCA
CTGAGTGAAGGCACATAAAGCAATTGAGGAGGAGGAGGAACCCCTCGTCCCCCTAGGAGCAGACCCAAGCTTGTGGCACCAGGCATCTGA
TGGTGCCAGGAAAGCCACTGGAATTGTCACACGGCGAGCACAGAGGGCCGGCCACCAGTCCTCGATGCTTCTGAACCCTGAAGCCCGATG
ACATCTTACGAGGTGGACGTTGGACTGTTCATGCGCATCGGGTGTCAGTGACTCATGGAGAAGAAATGGGGTAAATTTTTAGTGATGTTG
CTAATCATTGAATTCTGTTCTCTATTAAATTAAGAAAATGTTCCAAAAGCCATAAGCCTGAAGATTGGCCCTGTGCACGCACGCACACAC
ACACACACACACACACACACACACACACACACACGAAGGAGAGAGAGAGAAAACTGATGGGGAAAACAAGCTGTGTCTTCTTAACTGCCC
AAGTGAAAAGCAACCAAGTCCAGGAAATTACAATAGCTGTTAAGGAAAGGAAATAATGGTACAGATCTTTTTCTGTCTATCAAAACTATT

>In-frame_ENST00000264037_ENST00000557258_TCGA-RW-A688-01A_TECTA_chr11_121000920_+_FOXN3_chr14_89629313_length(amino acids)=1127AA_start in transcript=0_stop in transcript=3383
MNYSSFLRIWVSFIFALVQHQAQPRELMYPFWQNDTKTPKVDDGSSSEIKLAIPVFFFGVPYRTVYVNNNGVVSFNVLVSQFTPESFPLT
DGRAFVAPFWADVHNGIRGEIYYRETMEPAILKRATKDIRKYFKDMATFSATWVFIVTWEEVTFYGGSSTTPVNTFQAVLVSDGSYTFTL
FNYYEINWTTGTASGGDPLTGLGGVMAQAGFNGGNLTNFFSLPGSRTPEIVNIQETTNVNVPGRWAFKVDGKEIDPANGCTSRGQFLRRG
EVFWDDLNCTVKCRCLDFNNEIYCQEASCSPYEVCEPKGKFFYCSAVETSTCVVFGEPHYHTFDGFLFHFQGSCAYLLARQCLQTSSLPF
FSVEAKNEHRRGSAVSWVKELSVEVNGYKILIPKGSYGRVKVNDLVTSLPVTLDLGTVKIYQSGISTAVETDFGLLVTFDGQHYASISVP
GSYINSTCGLCGNYNKNPLDDFLRPDGRPAMSVLDLGESWRVYHADWKCDSGCVDNCTQCDAATEALYFGSDYCGFLNKTDGPLWECGTV
VDPTAFVHSCVYDLCSVRDNGTLLCQAIQAYALVCQALGIPIGDWRTQTGCVSTVQCPSFSHYSVCTSSCPDTCSDLTASRNCATPCTEG
CECNQGFVLSTSQCVPLHKCGCDFDGHYYTMGEFFWATANCTVQCLCEEGGDVYCFNKTCGSGEVCAVEDGYQGCFPKRETVCLLSQNQV
LHTFDGASYAFPSEFSYTLLKTCPERPEYLEIDINKKKPDAGPAWLRGLRILVADQEVKIGGIGASEVKLNGQEVELPFFHPSGKLEIYR
NKNSTTVESKGVVTVQYSDIGLLYIRLSTTYFNCTGGLCGFYNANASDEFCLPNGKCTDNLAVFLESWTTFEEICNGECGDLLKACNNDS
ELLKFYRSRSRCGIINDPSNSSFLECHGVVNVTAYYRTCLFRLCQSGGNESELCDSVARYASACKNADVEVGPWRTYDFCRMASPAAGCG
LRVSHLVAPQWSAETPRRITTTAVPSPPTPGAPRPPATPSPPPPPQPTTTMSLPPRGARRAARAARGASGATRAPATRKRTTGSTARRSP

--------------------------------------------------------------

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Fusion Gene PPI Analysis for TECTA-FOXN3


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for TECTA-FOXN3


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for TECTA-FOXN3


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneTECTAC3711374Nonsyndromic Deafness17CLINGEN
HgeneTECTAC1832187Deafness, Autosomal Dominant 122CTD_human;GENOMICS_ENGLAND;UNIPROT
HgeneTECTAC1384666hearing impairment1GENOMICS_ENGLAND
HgeneTECTAC1863655Deafness, Autosomal Recessive 211CTD_human;GENOMICS_ENGLAND