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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:TMEM123-KIAA1377 (FusionGDB2 ID:90959)

Fusion Gene Summary for TMEM123-KIAA1377

check button Fusion gene summary
Fusion gene informationFusion gene name: TMEM123-KIAA1377
Fusion gene ID: 90959
HgeneTgene
Gene symbol

TMEM123

KIAA1377

Gene ID

114908

57562

Gene nametransmembrane protein 123centrosomal protein 126
SynonymsKCT3|PORIMIN|PORMINKIAA1377
Cytomap

11q22.2

11q22.1

Type of geneprotein-codingprotein-coding
DescriptionporiminKCT-3keratinocytes associated transmembrane protein 3pro-oncosis receptor inducing membrane injuryserine/threonine-rich receptorcentrosomal protein of 126 kDacentrosomal protein 126kDa
Modification date2020031320200313
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000361236, ENST00000398136, 
ENST00000532161, ENST00000525577, 
ENST00000263468, ENST00000537689, 
Fusion gene scores* DoF score16 X 10 X 10=16004 X 3 X 4=48
# samples 274
** MAII scorelog2(27/1600*10)=-2.56704059272389
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(4/48*10)=-0.263034405833794
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: TMEM123 [Title/Abstract] AND KIAA1377 [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointTMEM123(102272270)-KIAA1377(101814996), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneTMEM123

GO:0070267

oncosis

9600958|11481458


check buttonFusion gene breakpoints across TMEM123 (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across KIAA1377 (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4BLCATCGA-GD-A3OS-01ATMEM123chr11

102272270

-KIAA1377chr11

101814996

+


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Fusion Gene ORF analysis for TMEM123-KIAA1377

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000361236ENST00000263468TMEM123chr11

102272270

-KIAA1377chr11

101814996

+
5CDS-intronENST00000361236ENST00000537689TMEM123chr11

102272270

-KIAA1377chr11

101814996

+
In-frameENST00000398136ENST00000263468TMEM123chr11

102272270

-KIAA1377chr11

101814996

+
5CDS-intronENST00000398136ENST00000537689TMEM123chr11

102272270

-KIAA1377chr11

101814996

+
Frame-shiftENST00000532161ENST00000263468TMEM123chr11

102272270

-KIAA1377chr11

101814996

+
5CDS-intronENST00000532161ENST00000537689TMEM123chr11

102272270

-KIAA1377chr11

101814996

+
intron-3CDSENST00000525577ENST00000263468TMEM123chr11

102272270

-KIAA1377chr11

101814996

+
intron-intronENST00000525577ENST00000537689TMEM123chr11

102272270

-KIAA1377chr11

101814996

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)
BP loci
(transcript)
Predicted start
(transcript)
Predicted stop
(transcript)
Seq length
(amino acids)
ENST00000361236TMEM123chr11102272270-ENST00000263468KIAA1377chr11101814996+72827612438661280
ENST00000398136TMEM123chr11102272270-ENST00000263468KIAA1377chr11101814996+754410238541281347

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000361236ENST00000263468TMEM123chr11102272270-KIAA1377chr11101814996+0.0006364110.9993636
ENST00000398136ENST00000263468TMEM123chr11102272270-KIAA1377chr11101814996+0.0008484570.9991516

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Fusion Genomic Features for TMEM123-KIAA1377


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
TMEM123chr11102272269-KIAA1377chr11101814995+0.0118390430.98816097
TMEM123chr11102272269-KIAA1377chr11101814995+0.0118390430.98816097

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for TMEM123-KIAA1377


check button Go to

FGviewer for the breakpoints of chr11:102272270-chr11:101814996

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneTMEM123chr11:102272270chr11:101814996ENST00000361236-3452_153181.66666666666666190.0Compositional biasNote=Thr-rich
HgeneTMEM123chr11:102272270chr11:101814996ENST00000398136-4552_153200.66666666666666209.0Compositional biasNote=Thr-rich
HgeneTMEM123chr11:102272270chr11:101814996ENST00000361236-3427_166181.66666666666666190.0Topological domainExtracellular
HgeneTMEM123chr11:102272270chr11:101814996ENST00000398136-4527_166200.66666666666666209.0Topological domainExtracellular
HgeneTMEM123chr11:102272270chr11:101814996ENST00000398136-45167_187200.66666666666666209.0TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneTMEM123chr11:102272270chr11:101814996ENST00000361236-34188_208181.66666666666666190.0Topological domainCytoplasmic
HgeneTMEM123chr11:102272270chr11:101814996ENST00000398136-45188_208200.66666666666666209.0Topological domainCytoplasmic
HgeneTMEM123chr11:102272270chr11:101814996ENST00000361236-34167_187181.66666666666666190.0TransmembraneHelical
TgeneKIAA1377chr11:102272270chr11:101814996ENST0000026346811149_12182.666666666666671118.0Coiled coilOntology_term=ECO:0000255


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Fusion Gene Sequence for TMEM123-KIAA1377


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000361236_ENST00000263468_TCGA-GD-A3OS-01A_TMEM123_chr11_102272270_-_KIAA1377_chr11_101814996_length(transcript)=7282nt_BP=761nt
CCCAGCCCGGCCCCGCCGCCCCGGCTGCGCACGCGACGCCCCCTCCAGGCCCCGCTCCTGCGCCCTATTTGGTCATTCGGGGGGCAAGCG
GCGGGAGGGGAAACGTGCGCGGCCGAAGGGGAAGCGGAGCCGGCGCCGGCTGCGCAGAGGAGCCGCTCTCGCCGCCGCCACCTCGGCTGG
GAGCCCACGAGGCTGCCGCATCCTGCCCTCGGAACAATGGGACTCGGCGCGCGAGGTGCTTGGGCCGCGCTGCTCCTGGGGACGCTGCAG
GTGCTAGCGCTGCTGGGGGCCGCCCATGAAAGCGCAGCCATGGCGGAGACTCTCCAACATGTGCCTTCTGACCATACAAATGAAACTTCC
AACAGTACTGTGAAACCACCAACTTCAGTTGCCTCAGACTCCAGTAATACAACGGTCACCACCATGAAACCTACAGCGGCATCTAATACA
ACAACACCAGGGATGGTCTCAACAAATATGACTTCTACCACCTTAAAGTCTACACCCAAAACAACAAGTGTTTCACAGAACACATCTCAG
ATATCAACATCCACAATGACCGTAACCCACAATAGTTCAGTGACATCTGCTGCTTCATCAGTAACAATCACAACAACTATGCATTCTGAA
GCAAAGAAAGGATCAAAATTTGATACTGGGAGCTTTGTTGGTGGTATTGTATTAACGCTGGGAGTTTTATCTATTCTTTACATTGGATGC
AAAATGTATTACTCAAGAAGAGGCATTCGGTATCGAACCATAGCTTTTGAGGAGAAACGAAAAGAACAGGAAGAAAAAGAACACCAAATT
AGAGAACAAATACTTCAACAAAGAAAACAGAAGTTTGAAGAAGTTACTGAAAAATTCCAGCGTGCCCATGTTCCTCTTTCACAGCGGAGG
AAAGCAGTTTCCCGAAAACCAGTTCCTCCATTAGAAGAGGCCCTCAAACAAATTCAGGAATCCAACTTAAAATCAGAAGTAAACCTTCCC
TTTTCCCGTAGACCAACAATAAACTGGAGAGCTATAGATTCTGCCTTGCCTTCCGCATTATCAAAAAATGATCACAAGCATCAGAAACAA
CTCTTATCCAAAATCAATTGTGAGAAAGAAATGAATGAAAACATGAGGGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTG
GAGGAAACTCAGAAACTCCTCGAAGATCAACATCTAAGCAATTTGCAAAAATTTGGTGATGAAGTTAATCAGATAACCAATTCTGAAACC
CTCTCAAGTATAGACAGTCTTGAGGCTACAGAGCATGAAGAAATATATTTAACACTTAATAAGGAGCATTCCACATCCATCCAGCGGAAT
ACCATTTCCCTCAAACCAGCAAATATGCAATCAACTAATCTCAGCTGCTTTGATGAAGATAAACTGGCATTCTCTAAAACTCAACATATA
AATAATTGGCTTACAAATTTAGATGCTTCAAATACTCAGAATGTCACAGCTTTCTCAGATATTTTAAGTAAATCTAATGTTCTGCCTTCA
TGGGAATATTTTAATAGTAAAGAACAAAATCCATCTCCTTTGAATGGAACAGTGGAAAGAGCCACAAATACTGCTAATAATTCAGTACCC
TTTGTATCTAGCCCACCCATGTTTGTACTAGATAAAAAATGTGAAAAGACCTCTGAAACTAGCACTATGAGGACAACTGACTCCACTTCT
GGAGCATTCAAAAGAGAGAGACCATTAGTTACTGAGAGCCCAACATTTAAATTTAGCAAATCCCAAAGCACTTCAGATTCTCTAACCCAG
GAAGTGGCTACATTTCCAGACCAAGAGAAATATTCTGAATTAAATCAAGAAAATGGAACTACTTCAATTCCTACTTCATGTGTACCAGTG
GCAACGCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAGACCTTCAGCAAAGAACAGTATACACATAAAAGAAATTGATGCAGTGCAG
TGTTCTGATAAGTTAGATGAATTGAAAGATGGTAAAGAAGAAGAGATAAAATATTTTAATTGCAATAAGGAAGAGTTGCCTTTATTTTCA
GACAGTTTTCAAGATGCCTATATACCTCACAATCCTGATTCAAAAGATGAAAAACAAAAATTAGCTGAAACATCATCCTTGTCTAATGTA
ACTTCTAATTATGACTTTGTTGGCCAGCATAAGAAAATGAAATACAACATCCATGAGAGAAATGGTGTGAGATTTCTTAAAAGTATTTTA
AAGAAAGAATCTAAATATGAACATGGTTATCTTAAGGCATTAATTATAAATCAGAGCTTTAAGTTTGGAAATCAAAAAGCAGCAGCTATC
AGAGATAGTATTGAATTAACAAAGGAAAAAGGTGCAGAAATTCCAAAGACCATTAAAAAACTGAGGTGGTTTGATGAAACTAGCAATATA
GAAAACAATGCTGAAAACAGTCATTCACTGAAGAATAAAACAGGAACAACTCAACAGCATTCTCAACAATTCCACATTCAAAGTGGTGCT
GGAAGCAACATAATTAGTGTTTCTACTTGTGCTGTAAATTCTGCTGATACAAAGAAGTCCAGGGAGGATTCTATCTCTGAAAATGTTACG
ACTTTAGGAGGATCTGGAGCAGACCATATGCCTTTGAACTGTTTTATACCTTCAGGTTATAACTTTGCTAAACATGCCTGGCCAGCCTCA
AAAAAAGAAGAAAGTAAAATCCCTGTACATGATGATTCTAAAACTAAGCAAGGTAAGCCACAAAGAGGTAGAGCAAAAATAATTAGAAAA
CCAGGATCTGCAAAAGTCCAATCAGGCTTTATATGTACAAACAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGCAAAGTCAACATA
TTTACACAAGCTCAGGGAAAATTAATTATACCTTGTCCTCCTCCTCAATCTACATCAAATATTAGAAGTGGTAAAAATATACAAGTGTCT
CAGTGTCAACCAGTAACTCCTGAAAATCCTCAAAACATTATTACACATAACTCTTTTAATTCAAAACATGTGCTTCCAACAGAACACAGT
TTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGACCTAGTCACTGTGATACCATCACTGCCATCATATTGT
TCTTCAGAGTGCCAAACTTTCGCAAAAATAAATCATTCAAATGGCACTCAAGCAGTTGCCCGGCAAGATGCGACATTATATTGCACCCAA
AGAAGTCCTGTTTGTGAAGAAAGTTATCCGTCTGTGACTCTAAGAACTGCTGAAGAAGAATCAGTTCCCTTATGGAAAAGAGGTCCTAAT
GTCCTGCATCAAAATAAGAGGGCTACAGGGTCTACTGTTATGAGAAGAAAACGAATTGCTGAAACTAAGCGGAGAAATATTTTAGAGCAG
AAAAGACAAAACCCTGGATCTGTAGGACAGAAGTACAGTGAGCAAATTAATAATTTTGGACAAAGTGTCCTGCTAAGTTCAAGTGAGCCA
AAACAAACTACAAGGGGTACTTCTTATATTGAAGAAGTTTCAGATAGTACTTCTGAGTTTTTGATGGCTGAAAACTTAGTGAAAGCATCA
GTGCCGGAGGATGAGATTCTGACTGTCTTGAATAGCAAACAGATACAGAAATCAAATCTACCTTTAAATAAAACTCAACAATTCAACATC
TGCACACTGTCAGCTGAAGAACAGAAGATCCTAGAGTCCCTTAATGATCTCAGTGAAAGACTACATTATATACAAGAATCCATTTGCAAA
AACCCATCCATCAAAAATACTTTACAAATAATACCACTTCTGGAGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATAATTC
CAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCAGCCATAGGAAAACATGTG
AGCAACAACCCCCATGAACATTTGTCCTAACTCAGATTTTGTGAGCAGTGAAGTTTAACAGAGCAGTGACATTTAACAAAGCAGTGAAGT
TTAACAGAGTTCTGAGAATACCATGAAAGACATTATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGG
ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGCAATTTATAGATTTCATGTTGAAATATATGT
TAAATAAAATTTCTGTTTATTGAACCTCTTTATTAAACCTCTAACTTACTGATAAGATGTTTATGAAGTATGGCATATTTTGATTTTTTT
AATTGTAATAAATATTCTTAAAGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTACCTTTTTGTATGGTGA
AGGGAGGCCTTCCTATGGCTGTACAATTACATCGATTCTTCCAAATTTCATATTTCATACATGGCACTTTGGCATACCGAAAAAACATGA
AATTTTTCATTAAAATGCCATGAATCAAGCCAGGGCCGTTGGCTTATGCCTGTAATCCCAGCACTTTGCAGGCCGAGGTAGACAGATGGC
TTGAGCTCAGGAGTTCGTGACCAGCCTGGGCAACCCTGTCTCTACAAAAAATACAAAAATTAACCAGGCATGGTGGCATGCACCTGTAGT
CCCAGCTACTTGGGGTGCTGAGGCGGGAGGATTACTTGAGCCCAGGAGGATTACTTCAACCTGGGAGGTTGAGGCTGCAGTGAGCTGTGT
TTCGCCACTGCACACCAGCCTGGGTGACAGTGTGAGACCCAGCCTCAAAAAAAAAAAAAAAAAAGTGATGAATCAAAATTAGAAATTAAG
AGTTTTAAGAAAACATGTGGCCTTTTATTAATAACACTACTAAATTTTGGTTCCTCCATAGAATTAGTTTTGAAACACTTGATGTAGTGA
GAAATGCATTAACATGTTGAATGCCTACCATGTACCAAATTTTGTGCATATATTTTTTATTTAATCTGACCAGCCACCCAAACCATGGGT
ATTTTTGTCTCCACTTTAGAGATGAGAAACTGAGCCAAGGCCACATAGCTACCTACAGTGACAGAATCAAAATTCAAACTCAGGTTTATC
TAGTTCCAAAACCCATGTTCTTTCTGCCACACCATGTTAGTAGAAATGGAAACTATTGGATGAAATGAGGAAAAACAGGAAAAGAATTCA
CTTTTTAAATGAAGAAATTAGTGAAAAAATTGACCTAATGAAGGAAACATTTGTGCTTTCCTATATTTTTAATTTTAAGAATAGGATTTC
GGAAGGCGACAGAAAATTTAGTTCTTAGACATTTAAATAGAAAGTTGTGTGCCCCTATAGAAAATATTTGAGAATTTCTTATACTATCAA
GAAAAAATTCTGTGAATTAAGATGTAATTTATAAAATAACATTTCAATGGGGGTAAACAGGCCAGAAGAGTGTGCCAAGTTGTTTGTGAA
TCATTCCAAGCACCTCAGATGAAAACTCACTTTTATTAAAAAAAAAAAAGACAAGGGTTTATATTCATATACACTAGTATATATGTACAC
AGCAGCATCCTGCATGCCAAAGTAGCTTCACCGTTAGTAATCCCTCACTTTAATACCTCTTAGGAACCAAAGAATGCCTCTACAAGCAAA
AAGATAGTTGAAAATAGTTAAGATCCAAAGTCAGAATAGGCCAAAAAAAAAAAAAAAAAAAGCCTAAATAGTAAGCTGGTGAAACAAGAT
AAGATTTGCATTTTACTAGAACTTGCACATTATGATATTGTCCTTTTATGAAACTGTCATATGACCAGAATTCTTCTGTAATTCTGCCCA
TGACTCCTCCAGAATTTTAGTAGATACAGGGTGGGTTCATTAAGAGTGATAAAAGTGGGAAGACATAAAGAGCCTTTGTGAATTAAAGTG
GAAGAGAATAACACTTTGCATGCTATAAACGTGAAAACTAACATTTTTGGCCAGACACAGTGGCTCATGCATGTAATTCTAGCACTTTGG
AGGCCAAGGCAGGAGGACTGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAATGTAGCAAGACCCCATCTCTATATAAAATATAAAAA
TGTTGGCTGTGCACGGTAGCTTATGCCTGTAATCTCAGCACTTTGGGAGGCCAAGGCAGGCAGATCATGAGGTCAAGAGATCAAGACCAT
CCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATAGCTGGGCATGGTGGCACGCACCTCTACTCCCAGCTACTAGGAG
GCTGAGGCAGGAGAATCGTTTGAACCCAGGAGGTAGAGGTTGCAGTGAGCTGAGATTGCACCACTGCACCAGCCTGGCAACAGAGCAAGA
CTCCGTCTCACAAAAATGAATAAATAAAATAAAAATAAAAATGTTACTTTTTAAAAAGTAACTTTTTTAATAATATAAGAAAGAAAAATG
CCCTTTCACACTGAATCTTCAAGTTCTAAGGAAGAAAAGAGTCTCCTTTCGAATGTGAAGAAGTAAATTTAGAGGAAATCAAACAAGCAT
CACTTTCCTCAGTGGAAAAACTTATGAAACTTCTTATAAGAGAGAGTAATCTCAGGCCGGACATGCTGGCTCATACCTGTAATCCCAGAA
CTTTGGGAGGCCGAGGCAGGTGGATCATTTGAGCTCAGGAATTCAAGACCAGCCTGGGTAATATGGCAAGAGCCCAACTCTACTAAAAAT
ACAAAAAGAAAAGAAAACAGCCAAGCTTGGTGGTATGTGCCTGTGGTCCCAGCTACTGGGGAGGCTGAGGTGGGAGGATCGTTTGAGCCT
GGGAGGCAGAGGTTGCAGTGATCAGGAATTGTGCCACTGCACTCCAACCTGAGTGACAGAGCAACACTCTGTCTTAAAAGAAAAAAAAAA
AAGAGAGAGATAGTAATCTCTTGGGCAAAAGGTATCAAATAATTGAAAGAAAAGTTTAAACACATTTCCGAGAGGCAGGGCAACTAATAA
CTGGTCAGAAAAATTTAGACGGTCTTCATTTTAAAATTGGCATCAGGAAGGATTACCATGAACTTATTTTAAATCCATATTGTACCAGAA
TGACTATGTCTGTGTTTCTTAGGAATGTTGAAGCTTTTTGTGAAAACTGTACTGTATACATATATAAATATACACACACTTACATGTATG

>In-frame_ENST00000361236_ENST00000263468_TCGA-GD-A3OS-01A_TMEM123_chr11_102272270_-_KIAA1377_chr11_101814996_length(amino acids)=1280AA_start in transcript=24_stop in transcript=3866
MRTRRPLQAPLLRPIWSFGGQAAGGETCAAEGEAEPAPAAQRSRSRRRHLGWEPTRLPHPALGTMGLGARGAWAALLLGTLQVLALLGAA
HESAAMAETLQHVPSDHTNETSNSTVKPPTSVASDSSNTTVTTMKPTAASNTTTPGMVSTNMTSTTLKSTPKTTSVSQNTSQISTSTMTV
THNSSVTSAASSVTITTTMHSEAKKGSKFDTGSFVGGIVLTLGVLSILYIGCKMYYSRRGIRYRTIAFEEKRKEQEEKEHQIREQILQQR
KQKFEEVTEKFQRAHVPLSQRRKAVSRKPVPPLEEALKQIQESNLKSEVNLPFSRRPTINWRAIDSALPSALSKNDHKHQKQLLSKINCE
KEMNENMRATLATSKNVFQLKLEETQKLLEDQHLSNLQKFGDEVNQITNSETLSSIDSLEATEHEEIYLTLNKEHSTSIQRNTISLKPAN
MQSTNLSCFDEDKLAFSKTQHINNWLTNLDASNTQNVTAFSDILSKSNVLPSWEYFNSKEQNPSPLNGTVERATNTANNSVPFVSSPPMF
VLDKKCEKTSETSTMRTTDSTSGAFKRERPLVTESPTFKFSKSQSTSDSLTQEVATFPDQEKYSELNQENGTTSIPTSCVPVATPLVLPS
NIQSARPSAKNSIHIKEIDAVQCSDKLDELKDGKEEEIKYFNCNKEELPLFSDSFQDAYIPHNPDSKDEKQKLAETSSLSNVTSNYDFVG
QHKKMKYNIHERNGVRFLKSILKKESKYEHGYLKALIINQSFKFGNQKAAAIRDSIELTKEKGAEIPKTIKKLRWFDETSNIENNAENSH
SLKNKTGTTQQHSQQFHIQSGAGSNIISVSTCAVNSADTKKSREDSISENVTTLGGSGADHMPLNCFIPSGYNFAKHAWPASKKEESKIP
VHDDSKTKQGKPQRGRAKIIRKPGSAKVQSGFICTNRKGAVIQPQSASKVNIFTQAQGKLIIPCPPPQSTSNIRSGKNIQVSQCQPVTPE
NPQNIITHNSFNSKHVLPTEHSLNQWNQESSSPLSNACSDLVTVIPSLPSYCSSECQTFAKINHSNGTQAVARQDATLYCTQRSPVCEES
YPSVTLRTAEEESVPLWKRGPNVLHQNKRATGSTVMRRKRIAETKRRNILEQKRQNPGSVGQKYSEQINNFGQSVLLSSSEPKQTTRGTS
YIEEVSDSTSEFLMAENLVKASVPEDEILTVLNSKQIQKSNLPLNKTQQFNICTLSAEEQKILESLNDLSERLHYIQESICKNPSIKNTL

--------------------------------------------------------------
>In-frame_ENST00000398136_ENST00000263468_TCGA-GD-A3OS-01A_TMEM123_chr11_102272270_-_KIAA1377_chr11_101814996_length(transcript)=7544nt_BP=1023nt
AAAGGCTTCCTTCCGGGCACCGCGAAGCCAGCGTGCTCAGCATTCAGGGAGGCAGCGGCGCTCGCCTTCATCCAGGACAACAAAACTGCC
ATTTCCGAAGAGAAAGGAAACGGCTCGCGGTTTCTGGGGTTCCCAAGCGCGCGCCTGCGAGGGAGGCCGCGAGCCGAGTCGCCACGCCCA
GAACCCCGAGCCCGCCCCCGCGCCACCCAGCCCGGCCCCGCCGCCCCGGCTGCGCACGCGACGCCCCCTCCAGGCCCCGCTCCTGCGCCC
TATTTGGTCATTCGGGGGGCAAGCGGCGGGAGGGGAAACGTGCGCGGCCGAAGGGGAAGCGGAGCCGGCGCCGGCTGCGCAGAGGAGCCG
CTCTCGCCGCCGCCACCTCGGCTGGGAGCCCACGAGGCTGCCGCATCCTGCCCTCGGAACAATGGGACTCGGCGCGCGAGGTGCTTGGGC
CGCGCTGCTCCTGGGGACGCTGCAGGTGCTAGCGCTGCTGGGGGCCGCCCATGAAAGCGCAGCCATGGCGGCATCTGCAAACATAGAGAA
TTCTGGGCTTCCACACAACTCCAGTGCTAACTCAACAGAGACTCTCCAACATGTGCCTTCTGACCATACAAATGAAACTTCCAACAGTAC
TGTGAAACCACCAACTTCAGTTGCCTCAGACTCCAGTAATACAACGGTCACCACCATGAAACCTACAGCGGCATCTAATACAACAACACC
AGGGATGGTCTCAACAAATATGACTTCTACCACCTTAAAGTCTACACCCAAAACAACAAGTGTTTCACAGAACACATCTCAGATATCAAC
ATCCACAATGACCGTAACCCACAATAGTTCAGTGACATCTGCTGCTTCATCAGTAACAATCACAACAACTATGCATTCTGAAGCAAAGAA
AGGATCAAAATTTGATACTGGGAGCTTTGTTGGTGGTATTGTATTAACGCTGGGAGTTTTATCTATTCTTTACATTGGATGCAAAATGTA
TTACTCAAGAAGAGGCATTCGGTATCGAACCATAGCTTTTGAGGAGAAACGAAAAGAACAGGAAGAAAAAGAACACCAAATTAGAGAACA
AATACTTCAACAAAGAAAACAGAAGTTTGAAGAAGTTACTGAAAAATTCCAGCGTGCCCATGTTCCTCTTTCACAGCGGAGGAAAGCAGT
TTCCCGAAAACCAGTTCCTCCATTAGAAGAGGCCCTCAAACAAATTCAGGAATCCAACTTAAAATCAGAAGTAAACCTTCCCTTTTCCCG
TAGACCAACAATAAACTGGAGAGCTATAGATTCTGCCTTGCCTTCCGCATTATCAAAAAATGATCACAAGCATCAGAAACAACTCTTATC
CAAAATCAATTGTGAGAAAGAAATGAATGAAAACATGAGGGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGAAAC
TCAGAAACTCCTCGAAGATCAACATCTAAGCAATTTGCAAAAATTTGGTGATGAAGTTAATCAGATAACCAATTCTGAAACCCTCTCAAG
TATAGACAGTCTTGAGGCTACAGAGCATGAAGAAATATATTTAACACTTAATAAGGAGCATTCCACATCCATCCAGCGGAATACCATTTC
CCTCAAACCAGCAAATATGCAATCAACTAATCTCAGCTGCTTTGATGAAGATAAACTGGCATTCTCTAAAACTCAACATATAAATAATTG
GCTTACAAATTTAGATGCTTCAAATACTCAGAATGTCACAGCTTTCTCAGATATTTTAAGTAAATCTAATGTTCTGCCTTCATGGGAATA
TTTTAATAGTAAAGAACAAAATCCATCTCCTTTGAATGGAACAGTGGAAAGAGCCACAAATACTGCTAATAATTCAGTACCCTTTGTATC
TAGCCCACCCATGTTTGTACTAGATAAAAAATGTGAAAAGACCTCTGAAACTAGCACTATGAGGACAACTGACTCCACTTCTGGAGCATT
CAAAAGAGAGAGACCATTAGTTACTGAGAGCCCAACATTTAAATTTAGCAAATCCCAAAGCACTTCAGATTCTCTAACCCAGGAAGTGGC
TACATTTCCAGACCAAGAGAAATATTCTGAATTAAATCAAGAAAATGGAACTACTTCAATTCCTACTTCATGTGTACCAGTGGCAACGCC
TTTAGTTTTGCCATCTAATATACAGTCAGCTAGACCTTCAGCAAAGAACAGTATACACATAAAAGAAATTGATGCAGTGCAGTGTTCTGA
TAAGTTAGATGAATTGAAAGATGGTAAAGAAGAAGAGATAAAATATTTTAATTGCAATAAGGAAGAGTTGCCTTTATTTTCAGACAGTTT
TCAAGATGCCTATATACCTCACAATCCTGATTCAAAAGATGAAAAACAAAAATTAGCTGAAACATCATCCTTGTCTAATGTAACTTCTAA
TTATGACTTTGTTGGCCAGCATAAGAAAATGAAATACAACATCCATGAGAGAAATGGTGTGAGATTTCTTAAAAGTATTTTAAAGAAAGA
ATCTAAATATGAACATGGTTATCTTAAGGCATTAATTATAAATCAGAGCTTTAAGTTTGGAAATCAAAAAGCAGCAGCTATCAGAGATAG
TATTGAATTAACAAAGGAAAAAGGTGCAGAAATTCCAAAGACCATTAAAAAACTGAGGTGGTTTGATGAAACTAGCAATATAGAAAACAA
TGCTGAAAACAGTCATTCACTGAAGAATAAAACAGGAACAACTCAACAGCATTCTCAACAATTCCACATTCAAAGTGGTGCTGGAAGCAA
CATAATTAGTGTTTCTACTTGTGCTGTAAATTCTGCTGATACAAAGAAGTCCAGGGAGGATTCTATCTCTGAAAATGTTACGACTTTAGG
AGGATCTGGAGCAGACCATATGCCTTTGAACTGTTTTATACCTTCAGGTTATAACTTTGCTAAACATGCCTGGCCAGCCTCAAAAAAAGA
AGAAAGTAAAATCCCTGTACATGATGATTCTAAAACTAAGCAAGGTAAGCCACAAAGAGGTAGAGCAAAAATAATTAGAAAACCAGGATC
TGCAAAAGTCCAATCAGGCTTTATATGTACAAACAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGCAAAGTCAACATATTTACACA
AGCTCAGGGAAAATTAATTATACCTTGTCCTCCTCCTCAATCTACATCAAATATTAGAAGTGGTAAAAATATACAAGTGTCTCAGTGTCA
ACCAGTAACTCCTGAAAATCCTCAAAACATTATTACACATAACTCTTTTAATTCAAAACATGTGCTTCCAACAGAACACAGTTTGAATCA
GTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGACCTAGTCACTGTGATACCATCACTGCCATCATATTGTTCTTCAGA
GTGCCAAACTTTCGCAAAAATAAATCATTCAAATGGCACTCAAGCAGTTGCCCGGCAAGATGCGACATTATATTGCACCCAAAGAAGTCC
TGTTTGTGAAGAAAGTTATCCGTCTGTGACTCTAAGAACTGCTGAAGAAGAATCAGTTCCCTTATGGAAAAGAGGTCCTAATGTCCTGCA
TCAAAATAAGAGGGCTACAGGGTCTACTGTTATGAGAAGAAAACGAATTGCTGAAACTAAGCGGAGAAATATTTTAGAGCAGAAAAGACA
AAACCCTGGATCTGTAGGACAGAAGTACAGTGAGCAAATTAATAATTTTGGACAAAGTGTCCTGCTAAGTTCAAGTGAGCCAAAACAAAC
TACAAGGGGTACTTCTTATATTGAAGAAGTTTCAGATAGTACTTCTGAGTTTTTGATGGCTGAAAACTTAGTGAAAGCATCAGTGCCGGA
GGATGAGATTCTGACTGTCTTGAATAGCAAACAGATACAGAAATCAAATCTACCTTTAAATAAAACTCAACAATTCAACATCTGCACACT
GTCAGCTGAAGAACAGAAGATCCTAGAGTCCCTTAATGATCTCAGTGAAAGACTACATTATATACAAGAATCCATTTGCAAAAACCCATC
CATCAAAAATACTTTACAAATAATACCACTTCTGGAGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCAGAA
TCCGTCTAAGAAGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCAGCCATAGGAAAACATGTGAGCAACAA
CCCCCATGAACATTTGTCCTAACTCAGATTTTGTGAGCAGTGAAGTTTAACAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGA
GTTCTGAGAATACCATGAAAGACATTATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCT
TGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGCAATTTATAGATTTCATGTTGAAATATATGTTAAATAAA
ATTTCTGTTTATTGAACCTCTTTATTAAACCTCTAACTTACTGATAAGATGTTTATGAAGTATGGCATATTTTGATTTTTTTAATTGTAA
TAAATATTCTTAAAGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTACCTTTTTGTATGGTGAAGGGAGGC
CTTCCTATGGCTGTACAATTACATCGATTCTTCCAAATTTCATATTTCATACATGGCACTTTGGCATACCGAAAAAACATGAAATTTTTC
ATTAAAATGCCATGAATCAAGCCAGGGCCGTTGGCTTATGCCTGTAATCCCAGCACTTTGCAGGCCGAGGTAGACAGATGGCTTGAGCTC
AGGAGTTCGTGACCAGCCTGGGCAACCCTGTCTCTACAAAAAATACAAAAATTAACCAGGCATGGTGGCATGCACCTGTAGTCCCAGCTA
CTTGGGGTGCTGAGGCGGGAGGATTACTTGAGCCCAGGAGGATTACTTCAACCTGGGAGGTTGAGGCTGCAGTGAGCTGTGTTTCGCCAC
TGCACACCAGCCTGGGTGACAGTGTGAGACCCAGCCTCAAAAAAAAAAAAAAAAAAGTGATGAATCAAAATTAGAAATTAAGAGTTTTAA
GAAAACATGTGGCCTTTTATTAATAACACTACTAAATTTTGGTTCCTCCATAGAATTAGTTTTGAAACACTTGATGTAGTGAGAAATGCA
TTAACATGTTGAATGCCTACCATGTACCAAATTTTGTGCATATATTTTTTATTTAATCTGACCAGCCACCCAAACCATGGGTATTTTTGT
CTCCACTTTAGAGATGAGAAACTGAGCCAAGGCCACATAGCTACCTACAGTGACAGAATCAAAATTCAAACTCAGGTTTATCTAGTTCCA
AAACCCATGTTCTTTCTGCCACACCATGTTAGTAGAAATGGAAACTATTGGATGAAATGAGGAAAAACAGGAAAAGAATTCACTTTTTAA
ATGAAGAAATTAGTGAAAAAATTGACCTAATGAAGGAAACATTTGTGCTTTCCTATATTTTTAATTTTAAGAATAGGATTTCGGAAGGCG
ACAGAAAATTTAGTTCTTAGACATTTAAATAGAAAGTTGTGTGCCCCTATAGAAAATATTTGAGAATTTCTTATACTATCAAGAAAAAAT
TCTGTGAATTAAGATGTAATTTATAAAATAACATTTCAATGGGGGTAAACAGGCCAGAAGAGTGTGCCAAGTTGTTTGTGAATCATTCCA
AGCACCTCAGATGAAAACTCACTTTTATTAAAAAAAAAAAAGACAAGGGTTTATATTCATATACACTAGTATATATGTACACAGCAGCAT
CCTGCATGCCAAAGTAGCTTCACCGTTAGTAATCCCTCACTTTAATACCTCTTAGGAACCAAAGAATGCCTCTACAAGCAAAAAGATAGT
TGAAAATAGTTAAGATCCAAAGTCAGAATAGGCCAAAAAAAAAAAAAAAAAAAGCCTAAATAGTAAGCTGGTGAAACAAGATAAGATTTG
CATTTTACTAGAACTTGCACATTATGATATTGTCCTTTTATGAAACTGTCATATGACCAGAATTCTTCTGTAATTCTGCCCATGACTCCT
CCAGAATTTTAGTAGATACAGGGTGGGTTCATTAAGAGTGATAAAAGTGGGAAGACATAAAGAGCCTTTGTGAATTAAAGTGGAAGAGAA
TAACACTTTGCATGCTATAAACGTGAAAACTAACATTTTTGGCCAGACACAGTGGCTCATGCATGTAATTCTAGCACTTTGGAGGCCAAG
GCAGGAGGACTGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAATGTAGCAAGACCCCATCTCTATATAAAATATAAAAATGTTGGCT
GTGCACGGTAGCTTATGCCTGTAATCTCAGCACTTTGGGAGGCCAAGGCAGGCAGATCATGAGGTCAAGAGATCAAGACCATCCTGGCCA
ACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAATAGCTGGGCATGGTGGCACGCACCTCTACTCCCAGCTACTAGGAGGCTGAGGC
AGGAGAATCGTTTGAACCCAGGAGGTAGAGGTTGCAGTGAGCTGAGATTGCACCACTGCACCAGCCTGGCAACAGAGCAAGACTCCGTCT
CACAAAAATGAATAAATAAAATAAAAATAAAAATGTTACTTTTTAAAAAGTAACTTTTTTAATAATATAAGAAAGAAAAATGCCCTTTCA
CACTGAATCTTCAAGTTCTAAGGAAGAAAAGAGTCTCCTTTCGAATGTGAAGAAGTAAATTTAGAGGAAATCAAACAAGCATCACTTTCC
TCAGTGGAAAAACTTATGAAACTTCTTATAAGAGAGAGTAATCTCAGGCCGGACATGCTGGCTCATACCTGTAATCCCAGAACTTTGGGA
GGCCGAGGCAGGTGGATCATTTGAGCTCAGGAATTCAAGACCAGCCTGGGTAATATGGCAAGAGCCCAACTCTACTAAAAATACAAAAAG
AAAAGAAAACAGCCAAGCTTGGTGGTATGTGCCTGTGGTCCCAGCTACTGGGGAGGCTGAGGTGGGAGGATCGTTTGAGCCTGGGAGGCA
GAGGTTGCAGTGATCAGGAATTGTGCCACTGCACTCCAACCTGAGTGACAGAGCAACACTCTGTCTTAAAAGAAAAAAAAAAAAGAGAGA
GATAGTAATCTCTTGGGCAAAAGGTATCAAATAATTGAAAGAAAAGTTTAAACACATTTCCGAGAGGCAGGGCAACTAATAACTGGTCAG
AAAAATTTAGACGGTCTTCATTTTAAAATTGGCATCAGGAAGGATTACCATGAACTTATTTTAAATCCATATTGTACCAGAATGACTATG
TCTGTGTTTCTTAGGAATGTTGAAGCTTTTTGTGAAAACTGTACTGTATACATATATAAATATACACACACTTACATGTATGTATTTTGA

>In-frame_ENST00000398136_ENST00000263468_TCGA-GD-A3OS-01A_TMEM123_chr11_102272270_-_KIAA1377_chr11_101814996_length(amino acids)=1347AA_start in transcript=85_stop in transcript=4128
MPFPKRKETARGFWGSQARACEGGREPSRHAQNPEPAPAPPSPAPPPRLRTRRPLQAPLLRPIWSFGGQAAGGETCAAEGEAEPAPAAQR
SRSRRRHLGWEPTRLPHPALGTMGLGARGAWAALLLGTLQVLALLGAAHESAAMAASANIENSGLPHNSSANSTETLQHVPSDHTNETSN
STVKPPTSVASDSSNTTVTTMKPTAASNTTTPGMVSTNMTSTTLKSTPKTTSVSQNTSQISTSTMTVTHNSSVTSAASSVTITTTMHSEA
KKGSKFDTGSFVGGIVLTLGVLSILYIGCKMYYSRRGIRYRTIAFEEKRKEQEEKEHQIREQILQQRKQKFEEVTEKFQRAHVPLSQRRK
AVSRKPVPPLEEALKQIQESNLKSEVNLPFSRRPTINWRAIDSALPSALSKNDHKHQKQLLSKINCEKEMNENMRATLATSKNVFQLKLE
ETQKLLEDQHLSNLQKFGDEVNQITNSETLSSIDSLEATEHEEIYLTLNKEHSTSIQRNTISLKPANMQSTNLSCFDEDKLAFSKTQHIN
NWLTNLDASNTQNVTAFSDILSKSNVLPSWEYFNSKEQNPSPLNGTVERATNTANNSVPFVSSPPMFVLDKKCEKTSETSTMRTTDSTSG
AFKRERPLVTESPTFKFSKSQSTSDSLTQEVATFPDQEKYSELNQENGTTSIPTSCVPVATPLVLPSNIQSARPSAKNSIHIKEIDAVQC
SDKLDELKDGKEEEIKYFNCNKEELPLFSDSFQDAYIPHNPDSKDEKQKLAETSSLSNVTSNYDFVGQHKKMKYNIHERNGVRFLKSILK
KESKYEHGYLKALIINQSFKFGNQKAAAIRDSIELTKEKGAEIPKTIKKLRWFDETSNIENNAENSHSLKNKTGTTQQHSQQFHIQSGAG
SNIISVSTCAVNSADTKKSREDSISENVTTLGGSGADHMPLNCFIPSGYNFAKHAWPASKKEESKIPVHDDSKTKQGKPQRGRAKIIRKP
GSAKVQSGFICTNRKGAVIQPQSASKVNIFTQAQGKLIIPCPPPQSTSNIRSGKNIQVSQCQPVTPENPQNIITHNSFNSKHVLPTEHSL
NQWNQESSSPLSNACSDLVTVIPSLPSYCSSECQTFAKINHSNGTQAVARQDATLYCTQRSPVCEESYPSVTLRTAEEESVPLWKRGPNV
LHQNKRATGSTVMRRKRIAETKRRNILEQKRQNPGSVGQKYSEQINNFGQSVLLSSSEPKQTTRGTSYIEEVSDSTSEFLMAENLVKASV

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Fusion Gene PPI Analysis for TMEM123-KIAA1377


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for TMEM123-KIAA1377


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for TMEM123-KIAA1377


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource