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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:TMOD3-PICALM (FusionGDB2 ID:91695) |
Fusion Gene Summary for TMOD3-PICALM |
Fusion gene summary |
Fusion gene information | Fusion gene name: TMOD3-PICALM | Fusion gene ID: 91695 | Hgene | Tgene | Gene symbol | TMOD3 | PICALM | Gene ID | 29766 | 8301 |
Gene name | tropomodulin 3 | phosphatidylinositol binding clathrin assembly protein | |
Synonyms | UTMOD | CALM|CLTH|LAP | |
Cytomap | 15q21.2 | 11q14.2 | |
Type of gene | protein-coding | protein-coding | |
Description | tropomodulin-3tropomodulin 3 (ubiquitous)ubiquitous tropomodulin | phosphatidylinositol-binding clathrin assembly proteinclathrin assembly lymphoid myeloid leukemia protein | |
Modification date | 20200313 | 20200322 | |
UniProtAcc | . | Q13492 | |
Ensembl transtripts involved in fusion gene | ENST00000308580, ENST00000544199, ENST00000561136, | ENST00000532317, ENST00000526033, ENST00000393346, ENST00000528398, ENST00000356360, ENST00000528411, | |
Fusion gene scores | * DoF score | 9 X 8 X 6=432 | 35 X 26 X 12=10920 |
# samples | 10 | 44 | |
** MAII score | log2(10/432*10)=-2.11103131238874 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(44/10920*10)=-4.63332552228256 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: TMOD3 [Title/Abstract] AND PICALM [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | TMOD3(52194233)-PICALM(85722179), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | PICALM | GO:0006897 | endocytosis | 22118466 |
Tgene | PICALM | GO:0006898 | receptor-mediated endocytosis | 10436022 |
Tgene | PICALM | GO:0032880 | regulation of protein localization | 10436022 |
Tgene | PICALM | GO:0045893 | positive regulation of transcription, DNA-templated | 11425879 |
Tgene | PICALM | GO:0048261 | negative regulation of receptor-mediated endocytosis | 10436022 |
Tgene | PICALM | GO:1905224 | clathrin-coated pit assembly | 16262731 |
Fusion gene breakpoints across TMOD3 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across PICALM (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | GBM | TCGA-06-0878-01A | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
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Fusion Gene ORF analysis for TMOD3-PICALM |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000308580 | ENST00000532317 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
In-frame | ENST00000308580 | ENST00000526033 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
In-frame | ENST00000308580 | ENST00000393346 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
In-frame | ENST00000308580 | ENST00000528398 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
In-frame | ENST00000308580 | ENST00000356360 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
5CDS-intron | ENST00000308580 | ENST00000528411 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
In-frame | ENST00000544199 | ENST00000532317 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
In-frame | ENST00000544199 | ENST00000526033 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
In-frame | ENST00000544199 | ENST00000393346 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
In-frame | ENST00000544199 | ENST00000528398 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
In-frame | ENST00000544199 | ENST00000356360 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
5CDS-intron | ENST00000544199 | ENST00000528411 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
intron-3CDS | ENST00000561136 | ENST00000532317 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
intron-3CDS | ENST00000561136 | ENST00000526033 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
intron-3CDS | ENST00000561136 | ENST00000393346 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
intron-3CDS | ENST00000561136 | ENST00000528398 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
intron-3CDS | ENST00000561136 | ENST00000356360 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
intron-intron | ENST00000561136 | ENST00000528411 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000308580 | TMOD3 | chr15 | 52194233 | + | ENST00000532317 | PICALM | chr11 | 85722179 | - | 3842 | 1305 | 272 | 2479 | 735 |
ENST00000308580 | TMOD3 | chr15 | 52194233 | + | ENST00000526033 | PICALM | chr11 | 85722179 | - | 3943 | 1305 | 272 | 2584 | 770 |
ENST00000308580 | TMOD3 | chr15 | 52194233 | + | ENST00000393346 | PICALM | chr11 | 85722179 | - | 2838 | 1305 | 272 | 2605 | 777 |
ENST00000308580 | TMOD3 | chr15 | 52194233 | + | ENST00000528398 | PICALM | chr11 | 85722179 | - | 2663 | 1305 | 272 | 2455 | 727 |
ENST00000308580 | TMOD3 | chr15 | 52194233 | + | ENST00000356360 | PICALM | chr11 | 85722179 | - | 2605 | 1305 | 272 | 2545 | 757 |
ENST00000544199 | TMOD3 | chr15 | 52194233 | + | ENST00000532317 | PICALM | chr11 | 85722179 | - | 3608 | 1071 | 38 | 2245 | 735 |
ENST00000544199 | TMOD3 | chr15 | 52194233 | + | ENST00000526033 | PICALM | chr11 | 85722179 | - | 3709 | 1071 | 38 | 2350 | 770 |
ENST00000544199 | TMOD3 | chr15 | 52194233 | + | ENST00000393346 | PICALM | chr11 | 85722179 | - | 2604 | 1071 | 38 | 2371 | 777 |
ENST00000544199 | TMOD3 | chr15 | 52194233 | + | ENST00000528398 | PICALM | chr11 | 85722179 | - | 2429 | 1071 | 38 | 2221 | 727 |
ENST00000544199 | TMOD3 | chr15 | 52194233 | + | ENST00000356360 | PICALM | chr11 | 85722179 | - | 2371 | 1071 | 38 | 2311 | 757 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000308580 | ENST00000532317 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - | 0.000666204 | 0.9993338 |
ENST00000308580 | ENST00000526033 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - | 0.000622934 | 0.9993771 |
ENST00000308580 | ENST00000393346 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - | 0.001436894 | 0.9985631 |
ENST00000308580 | ENST00000528398 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - | 0.001552207 | 0.9984478 |
ENST00000308580 | ENST00000356360 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - | 0.001564883 | 0.9984351 |
ENST00000544199 | ENST00000532317 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - | 0.000664008 | 0.99933594 |
ENST00000544199 | ENST00000526033 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - | 0.000631187 | 0.99936885 |
ENST00000544199 | ENST00000393346 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - | 0.001493486 | 0.9985065 |
ENST00000544199 | ENST00000528398 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - | 0.001563155 | 0.99843687 |
ENST00000544199 | ENST00000356360 | TMOD3 | chr15 | 52194233 | + | PICALM | chr11 | 85722179 | - | 0.001698136 | 0.99830186 |
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Fusion Genomic Features for TMOD3-PICALM |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for TMOD3-PICALM |
Go to FGviewer for the breakpoints of chr15:52194233-chr11:85722179 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | PICALM |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Cytoplasmic adapter protein that plays a critical role in clathrin-mediated endocytosis which is important in processes such as internalization of cell receptors, synaptic transmission or removal of apoptotic cells. Recruits AP-2 and attaches clathrin triskelions to the cytoplasmic side of plasma membrane leading to clathrin-coated vesicles (CCVs) assembly (PubMed:10436022, PubMed:16262731, PubMed:27574975). Furthermore, regulates clathrin-coated vesicle size and maturation by directly sensing and driving membrane curvature (PubMed:25898166). In addition to binding to clathrin, mediates the endocytosis of small R-SNARES (Soluble NSF Attachment Protein REceptors) between plasma membranes and endosomes including VAMP2, VAMP3, VAMP4, VAMP7 or VAMP8 (PubMed:22118466, PubMed:21808019, PubMed:23741335). In turn, PICALM-dependent SNARE endocytosis is required for the formation and maturation of autophagic precursors (PubMed:25241929). Modulates thereby autophagy and the turnover of autophagy substrates such as MAPT/TAU or amyloid precursor protein cleaved C-terminal fragment (APP-CTF) (PubMed:25241929, PubMed:24067654). {ECO:0000269|PubMed:10436022, ECO:0000269|PubMed:16262731, ECO:0000269|PubMed:21808019, ECO:0000269|PubMed:22118466, ECO:0000269|PubMed:23741335, ECO:0000269|PubMed:24067654, ECO:0000269|PubMed:25241929, ECO:0000269|PubMed:25898166, ECO:0000269|PubMed:27574975}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | PICALM | chr15:52194233 | chr11:85722179 | ENST00000356360 | 5 | 19 | 14_145 | 219.33333333333334 | 633.0 | Domain | ENTH | |
Tgene | PICALM | chr15:52194233 | chr11:85722179 | ENST00000393346 | 5 | 20 | 14_145 | 219.33333333333334 | 653.0 | Domain | ENTH | |
Tgene | PICALM | chr15:52194233 | chr11:85722179 | ENST00000526033 | 5 | 20 | 14_145 | 219.33333333333334 | 646.0 | Domain | ENTH | |
Tgene | PICALM | chr15:52194233 | chr11:85722179 | ENST00000528398 | 5 | 19 | 14_145 | 168.33333333333334 | 552.0 | Domain | ENTH | |
Tgene | PICALM | chr15:52194233 | chr11:85722179 | ENST00000532317 | 5 | 20 | 14_145 | 219.33333333333334 | 611.0 | Domain | ENTH |
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Fusion Gene Sequence for TMOD3-PICALM |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000308580_ENST00000532317_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(transcript)=3842nt_BP=1305nt GAGTGCGCACGCGCGTCGGAGGCGAAGGAGGAACCCACCGCACCTACAGGGCGGTCGAGTGAGGGAGCTGCTGGCGGGTGGGTCTGGCAA CTCTTTGGGAGGCCGACGCGGGCGGACCGGCGGGTGCTGGGAACCGAGCCTCGGCTTGCGGCCGGCAGTTTCCGTGGGTCTGTGAAGAGG TCGGCGGCCCCTGCGGGCGCCAGTCAGCTTTAAGAAAAAGTAGAGATCACTTCTGACTGTACTGAACAGCAAAAATTAAGTGACTTGCTG CCCTGCACATCATGGCACTGCCATTCCGTAAGGACTTAGAAAAGTACAAAGACCTTGATGAAGATGAGCTCCTTGGGAATCTGTCAGAAA CAGAACTGAAACAACTGGAAACTGTTTTGGATGATCTTGACCCCGAGAATGCCCTTCTGCCTGCAGGGTTCCGGCAGAAGAACCAGACAT CAAAGTCCACCACAGGGCCATTTGATAGAGAGCATCTCCTTTCATATCTGGAGAAAGAAGCATTGGAGCATAAAGACAGGGAAGACTATG TGCCCTACACTGGAGAAAAAAAAGGGAAAATATTTATCCCCAAACAGAAACCTGTACAGACTTTTACAGAAGAAAAAGTGTCTCTTGATC CAGAATTAGAAGAAGCTTTGACAAGTGCTTCTGATACAGAATTGTGTGACCTCGCAGCAATTCTTGGGATGCACAATTTGATAACGAATA CAAAGTTCTGTAATATAATGGGAAGTAGTAATGGTGTTGACCAAGAACATTTTTCAAATGTGGTCAAAGGTGAAAAGATTCTTCCGGTAT TTGATGAGCCACCAAATCCAACCAATGTAGAAGAGAGTTTGAAGAGAACTAAAGAAAACGATGCTCATCTTGTTGAAGTTAATTTGAATA ATATAAAGAATATCCCAATTCCAACCCTAAAAGATTTTGCAAAGGCTTTGGAAACCAACACACATGTGAAATGTTTCAGTCTTGCAGCCA CCCGGAGCAATGACCCTGTTGCTACTGCTTTTGCAGAAATGCTGAAAGTGAACAAAACTTTGAAGAGCTTAAATGTGGAGTCCAACTTTA TCACGGGAGTTGGGATTCTGGCACTGATTGATGCGTTAAGAGATAATGAAACCCTGGCAGAGCTCAAGATTGACAATCAGAGGCAGCAGT TGGGGACAGCTGTAGAATTGGAAATGGCCAAGATGCTTGAGGAAAATACAAATATCCTTAAATTTGGATATCAGTTTACACAGCAGGGAC CACGAACCAGAGCAGCTAATGCTATAACAAAAAACAATGACTTAGAAAAATATTTTGATATGAAAAAGAACCAATGCAAAGAAGGTCTTG ACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTTGCAGAGCAAGTTGGAATTGACAGAGGTGATATAC CAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAAATCAAAGATTCTACAG CTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGAAAAGC AGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAA CAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTTCTACCCCTAGTTCTTCTAACA GCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCAACTGCTTCTCAGGTAG CAAGTACATGGGGAGGATTCACTCCTTCTCCAGTTGCACAGCCACACCCTTCAGCTGGCCTTAATGTTGACTTTGAATCTGTGTTTGGAA ATAAATCTACAAATGTTATTGTAGATTCTGGGGGCTTTGATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTCTCAGAACCAGAACC TTCCTGTTGCCAAACTCCCACCTAGCAAGTTAGTATCTGATGACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAA ATGGAACCACTAAGAATGATGTAAATTGGAGTCAACCAGGTGAAAAGAAGTTAACTGGGGGATCTAACTGGCAACCAAAGGTTGCACCAA CAACCGCTTGGAATGCTGCAACAATGAATGGCATGCATTTTCCACAATACGCACCCCCTGTAATGGCCTATCCTGCTACTACACCAACAG GCATGATAGGATATGGAATTCCTCCACAAATGGGAAGTGTTCCTGTAATGACGCAACCAACCTTAATATACAGCCAGCCTGTCATGAGAC CTCCAAACCCCTTTGGCCCTGTATCAGGAGCACAGATACAGTTTATGTAACTTGATGGAAGAAAATGGAATTACTCCAAAAAGACAAGTG CTCAAGCAGCAAAATCCTTACTTCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGAATGCTACAAG TAACTCAGTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCCAAGAATTGCTATGATTT AAGACTAAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCC TTATTTGGAAAGTGTGAAATTTGTATTTGGAAAAGCTGCCTGGAGAGAAGAACTGTGTCCTTTACTGTATTTCAACAGGACTCTTTTGGG GGATCAAAATTAAAATTCCTAATTATGCATTATCTTTCTTTTCTCCAGTCCTCACAAATACAGAAACAATAACTGAAATTAACTTTTCTT TTTTTAAAAAAAATTATATTCAGTTTGCAGTAGACATTCCTTAAGTATTTGTATTTATTTATGATTATCAATTTTACATAACATTAATAT TGTATCAGACCTCCTTATGAAAATGAGTATGGATGTGCACAGTATGTTTGATTTTTATCCACAAGAATGAATCTGATTCAGAATGCTTTT CTCAGCTGACATACAGAGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCGGCCTCTGTGGGATTTAGGGA AGCATTATAAATGCATTAATCCTTATAGTCAATTCTGTGCCTAGGATTTTGCCAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTT TAAATTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCATTATTTTCCATTTGACATTAGGGCCTTTCCAAA ATGAATGTGAGGAATTGCTTTCACTTCAAGACTTTCCTTCTTTTCACTAAAACTCTAGAAGGTGTTACAAGGGGGAGGGAAGGGGGGCAA AGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCTTTTAAATAAGGGGAAATAGTATCTTTAAAGTTAATGTCTAG CCAAGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCTTTAACATTTGGGTGGAGAGGGGCCTT AAGAAGGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTGCATTGTCTCTGCAGATTCTATTTTTGTTTAC >In-frame_ENST00000308580_ENST00000532317_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(amino acids)=735AA_start in transcript=272_stop in transcript=2479 MHIMALPFRKDLEKYKDLDEDELLGNLSETELKQLETVLDDLDPENALLPAGFRQKNQTSKSTTGPFDREHLLSYLEKEALEHKDREDYV PYTGEKKGKIFIPKQKPVQTFTEEKVSLDPELEEALTSASDTELCDLAAILGMHNLITNTKFCNIMGSSNGVDQEHFSNVVKGEKILPVF DEPPNPTNVEESLKRTKENDAHLVEVNLNNIKNIPIPTLKDFAKALETNTHVKCFSLAATRSNDPVATAFAEMLKVNKTLKSLNVESNFI TGVGILALIDALRDNETLAELKIDNQRQQLGTAVELEMAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLEKYFDMKKNQCKEGLD IYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDEREKQ AALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTASQVA STWGGFTPSPVAQPHPSAGLNVDFESVFGNKSTNVIVDSGGFDELGGLLKPTVASQNQNLPVAKLPPSKLVSDDLDSSLANLVGNLGIGN GTTKNDVNWSQPGEKKLTGGSNWQPKVAPTTAWNAATMNGMHFPQYAPPVMAYPATTPTGMIGYGIPPQMGSVPVMTQPTLIYSQPVMRP -------------------------------------------------------------- >In-frame_ENST00000308580_ENST00000526033_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(transcript)=3943nt_BP=1305nt GAGTGCGCACGCGCGTCGGAGGCGAAGGAGGAACCCACCGCACCTACAGGGCGGTCGAGTGAGGGAGCTGCTGGCGGGTGGGTCTGGCAA CTCTTTGGGAGGCCGACGCGGGCGGACCGGCGGGTGCTGGGAACCGAGCCTCGGCTTGCGGCCGGCAGTTTCCGTGGGTCTGTGAAGAGG TCGGCGGCCCCTGCGGGCGCCAGTCAGCTTTAAGAAAAAGTAGAGATCACTTCTGACTGTACTGAACAGCAAAAATTAAGTGACTTGCTG CCCTGCACATCATGGCACTGCCATTCCGTAAGGACTTAGAAAAGTACAAAGACCTTGATGAAGATGAGCTCCTTGGGAATCTGTCAGAAA CAGAACTGAAACAACTGGAAACTGTTTTGGATGATCTTGACCCCGAGAATGCCCTTCTGCCTGCAGGGTTCCGGCAGAAGAACCAGACAT CAAAGTCCACCACAGGGCCATTTGATAGAGAGCATCTCCTTTCATATCTGGAGAAAGAAGCATTGGAGCATAAAGACAGGGAAGACTATG TGCCCTACACTGGAGAAAAAAAAGGGAAAATATTTATCCCCAAACAGAAACCTGTACAGACTTTTACAGAAGAAAAAGTGTCTCTTGATC CAGAATTAGAAGAAGCTTTGACAAGTGCTTCTGATACAGAATTGTGTGACCTCGCAGCAATTCTTGGGATGCACAATTTGATAACGAATA CAAAGTTCTGTAATATAATGGGAAGTAGTAATGGTGTTGACCAAGAACATTTTTCAAATGTGGTCAAAGGTGAAAAGATTCTTCCGGTAT TTGATGAGCCACCAAATCCAACCAATGTAGAAGAGAGTTTGAAGAGAACTAAAGAAAACGATGCTCATCTTGTTGAAGTTAATTTGAATA ATATAAAGAATATCCCAATTCCAACCCTAAAAGATTTTGCAAAGGCTTTGGAAACCAACACACATGTGAAATGTTTCAGTCTTGCAGCCA CCCGGAGCAATGACCCTGTTGCTACTGCTTTTGCAGAAATGCTGAAAGTGAACAAAACTTTGAAGAGCTTAAATGTGGAGTCCAACTTTA TCACGGGAGTTGGGATTCTGGCACTGATTGATGCGTTAAGAGATAATGAAACCCTGGCAGAGCTCAAGATTGACAATCAGAGGCAGCAGT TGGGGACAGCTGTAGAATTGGAAATGGCCAAGATGCTTGAGGAAAATACAAATATCCTTAAATTTGGATATCAGTTTACACAGCAGGGAC CACGAACCAGAGCAGCTAATGCTATAACAAAAAACAATGACTTAGAAAAATATTTTGATATGAAAAAGAACCAATGCAAAGAAGGTCTTG ACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTTGCAGAGCAAGTTGGAATTGACAGAGGTGATATAC CAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAAATCAAAGATTCTACAG CTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGAAAAGC AGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAA CAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTTCTACCCCTAGTTCTTCTAACA GCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCAACTGCTTCTCAGGTAG CAAGTACATGGGGAGATGCTGTTGATGATGCCATTCCAAGCTTAAATCCTTTCCTCACAAAAAGTAGTGGTGATGTTCACCTTTCCATTT CTTCAGATGTATCTACTTTTACTACTAGGACACCTACTCATGAAATGTTTGTTGGATTCACTCCTTCTCCAGTTGCACAGCCACACCCTT CAGCTGGCCTTAATGTTGACTTTGAATCTGTGTTTGGAAATAAATCTACAAATGTTATTGTAGATTCTGGGGGCTTTGATGAACTAGGTG GACTTCTCAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAAGTTAGTATCTGATGACTTGGATT CATCTTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCACTAAGAATGATGTAAATTGGAGTCAACCAGGTGAAAAGAAGT TAACTGGGGGATCTAACTGGCAACCAAAGGTTGCACCAACAACCGCTTGGAATGCTGCAACAATGGCACCCCCTGTAATGGCCTATCCTG CTACTACACCAACAGGCATGATAGGATATGGAATTCCTCCACAAATGGGAAGTGTTCCTGTAATGACGCAACCAACCTTAATATACAGCC AGCCTGTCATGAGACCTCCAAACCCCTTTGGCCCTGTATCAGGAGCACAGATACAGTTTATGTAACTTGATGGAAGAAAATGGAATTACT CCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCA TTAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTATCAATACAGTTTATAAAGCCAA GAATTGCTATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGTTAATACCCATAATCAGTAACC TATCAAGAAAAGCCCTTATTTGGAAAGTGTGAAATTTGTATTTGGAAAAGCTGCCTGGAGAGAAGAACTGTGTCCTTTACTGTATTTCAA CAGGACTCTTTTGGGGGATCAAAATTAAAATTCCTAATTATGCATTATCTTTCTTTTCTCCAGTCCTCACAAATACAGAAACAATAACTG AAATTAACTTTTCTTTTTTTAAAAAAAATTATATTCAGTTTGCAGTAGACATTCCTTAAGTATTTGTATTTATTTATGATTATCAATTTT ACATAACATTAATATTGTATCAGACCTCCTTATGAAAATGAGTATGGATGTGCACAGTATGTTTGATTTTTATCCACAAGAATGAATCTG ATTCAGAATGCTTTTCTCAGCTGACATACAGAGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAATCTCTTAAGAATTCTCGGCCTC TGTGGGATTTAGGGAAGCATTATAAATGCATTAATCCTTATAGTCAATTCTGTGCCTAGGATTTTGCCAGGGAACAGTTCACTGACTAGG AAAAGCACTACATTTTAAATTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATGTCATTATTTTCCATTTGACAT TAGGGCCTTTCCAAAATGAATGTGAGGAATTGCTTTCACTTCAAGACTTTCCTTCTTTTCACTAAAACTCTAGAAGGTGTTACAAGGGGG AGGGAAGGGGGGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCTTTTAAATAAGGGGAAATAGTATCTTT AAAGTTAATGTCTAGCCAAGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGTAAATACATCTTTAACATTTGG GTGGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCTTGTTGCATTGTCTCTGCAGAT >In-frame_ENST00000308580_ENST00000526033_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(amino acids)=770AA_start in transcript=272_stop in transcript=2584 MHIMALPFRKDLEKYKDLDEDELLGNLSETELKQLETVLDDLDPENALLPAGFRQKNQTSKSTTGPFDREHLLSYLEKEALEHKDREDYV PYTGEKKGKIFIPKQKPVQTFTEEKVSLDPELEEALTSASDTELCDLAAILGMHNLITNTKFCNIMGSSNGVDQEHFSNVVKGEKILPVF DEPPNPTNVEESLKRTKENDAHLVEVNLNNIKNIPIPTLKDFAKALETNTHVKCFSLAATRSNDPVATAFAEMLKVNKTLKSLNVESNFI TGVGILALIDALRDNETLAELKIDNQRQQLGTAVELEMAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLEKYFDMKKNQCKEGLD IYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDEREKQ AALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTASQVA STWGDAVDDAIPSLNPFLTKSSGDVHLSISSDVSTFTTRTPTHEMFVGFTPSPVAQPHPSAGLNVDFESVFGNKSTNVIVDSGGFDELGG LLKPTVASQNQNLPVAKLPPSKLVSDDLDSSLANLVGNLGIGNGTTKNDVNWSQPGEKKLTGGSNWQPKVAPTTAWNAATMAPPVMAYPA -------------------------------------------------------------- >In-frame_ENST00000308580_ENST00000393346_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(transcript)=2838nt_BP=1305nt GAGTGCGCACGCGCGTCGGAGGCGAAGGAGGAACCCACCGCACCTACAGGGCGGTCGAGTGAGGGAGCTGCTGGCGGGTGGGTCTGGCAA CTCTTTGGGAGGCCGACGCGGGCGGACCGGCGGGTGCTGGGAACCGAGCCTCGGCTTGCGGCCGGCAGTTTCCGTGGGTCTGTGAAGAGG TCGGCGGCCCCTGCGGGCGCCAGTCAGCTTTAAGAAAAAGTAGAGATCACTTCTGACTGTACTGAACAGCAAAAATTAAGTGACTTGCTG CCCTGCACATCATGGCACTGCCATTCCGTAAGGACTTAGAAAAGTACAAAGACCTTGATGAAGATGAGCTCCTTGGGAATCTGTCAGAAA CAGAACTGAAACAACTGGAAACTGTTTTGGATGATCTTGACCCCGAGAATGCCCTTCTGCCTGCAGGGTTCCGGCAGAAGAACCAGACAT CAAAGTCCACCACAGGGCCATTTGATAGAGAGCATCTCCTTTCATATCTGGAGAAAGAAGCATTGGAGCATAAAGACAGGGAAGACTATG TGCCCTACACTGGAGAAAAAAAAGGGAAAATATTTATCCCCAAACAGAAACCTGTACAGACTTTTACAGAAGAAAAAGTGTCTCTTGATC CAGAATTAGAAGAAGCTTTGACAAGTGCTTCTGATACAGAATTGTGTGACCTCGCAGCAATTCTTGGGATGCACAATTTGATAACGAATA CAAAGTTCTGTAATATAATGGGAAGTAGTAATGGTGTTGACCAAGAACATTTTTCAAATGTGGTCAAAGGTGAAAAGATTCTTCCGGTAT TTGATGAGCCACCAAATCCAACCAATGTAGAAGAGAGTTTGAAGAGAACTAAAGAAAACGATGCTCATCTTGTTGAAGTTAATTTGAATA ATATAAAGAATATCCCAATTCCAACCCTAAAAGATTTTGCAAAGGCTTTGGAAACCAACACACATGTGAAATGTTTCAGTCTTGCAGCCA CCCGGAGCAATGACCCTGTTGCTACTGCTTTTGCAGAAATGCTGAAAGTGAACAAAACTTTGAAGAGCTTAAATGTGGAGTCCAACTTTA TCACGGGAGTTGGGATTCTGGCACTGATTGATGCGTTAAGAGATAATGAAACCCTGGCAGAGCTCAAGATTGACAATCAGAGGCAGCAGT TGGGGACAGCTGTAGAATTGGAAATGGCCAAGATGCTTGAGGAAAATACAAATATCCTTAAATTTGGATATCAGTTTACACAGCAGGGAC CACGAACCAGAGCAGCTAATGCTATAACAAAAAACAATGACTTAGAAAAATATTTTGATATGAAAAAGAACCAATGCAAAGAAGGTCTTG ACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTTGCAGAGCAAGTTGGAATTGACAGAGGTGATATAC CAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAAATCAAAGATTCTACAG CTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGAAAAGC AGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAA CAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTTCTACCCCTAGTTCTTCTAACA GCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCAACTGCTTCTCAGGTAG CAAGTACATGGGGAGATCCTTTCTCTGCTACTGTAGATGCTGTTGATGATGCCATTCCAAGCTTAAATCCTTTCCTCACAAAAAGTAGTG GTGATGTTCACCTTTCCATTTCTTCAGATGTATCTACTTTTACTACTAGGACACCTACTCATGAAATGTTTGTTGGATTCACTCCTTCTC CAGTTGCACAGCCACACCCTTCAGCTGGCCTTAATGTTGACTTTGAATCTGTGTTTGGAAATAAATCTACAAATGTTATTGTAGATTCTG GGGGCTTTGATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAAGT TAGTATCTGATGACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCACTAAGAATGATGTAAATTGGA GTCAACCAGGTGAAAAGAAGTTAACTGGGGGATCTAACTGGCAACCAAAGGTTGCACCAACAACCGCTTGGAATGCTGCAACAATGGCAC CCCCTGTAATGGCCTATCCTGCTACTACACCAACAGGCATGATAGGATATGGAATTCCTCCACAAATGGGAAGTGTTCCTGTAATGACGC AACCAACCTTAATATACAGCCAGCCTGTCATGAGACCTCCAAACCCCTTTGGCCCTGTATCAGGAGCACAGATACAGTTTATGTAACTTG ATGGAAGAAAATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAGCAAAATCCAAACTGCTGTCTCTTAAAT CTCTTAAACTCTCTTCTTCCATTAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTAT >In-frame_ENST00000308580_ENST00000393346_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(amino acids)=777AA_start in transcript=272_stop in transcript=2605 MHIMALPFRKDLEKYKDLDEDELLGNLSETELKQLETVLDDLDPENALLPAGFRQKNQTSKSTTGPFDREHLLSYLEKEALEHKDREDYV PYTGEKKGKIFIPKQKPVQTFTEEKVSLDPELEEALTSASDTELCDLAAILGMHNLITNTKFCNIMGSSNGVDQEHFSNVVKGEKILPVF DEPPNPTNVEESLKRTKENDAHLVEVNLNNIKNIPIPTLKDFAKALETNTHVKCFSLAATRSNDPVATAFAEMLKVNKTLKSLNVESNFI TGVGILALIDALRDNETLAELKIDNQRQQLGTAVELEMAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLEKYFDMKKNQCKEGLD IYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDEREKQ AALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTASQVA STWGDPFSATVDAVDDAIPSLNPFLTKSSGDVHLSISSDVSTFTTRTPTHEMFVGFTPSPVAQPHPSAGLNVDFESVFGNKSTNVIVDSG GFDELGGLLKPTVASQNQNLPVAKLPPSKLVSDDLDSSLANLVGNLGIGNGTTKNDVNWSQPGEKKLTGGSNWQPKVAPTTAWNAATMAP -------------------------------------------------------------- >In-frame_ENST00000308580_ENST00000528398_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(transcript)=2663nt_BP=1305nt GAGTGCGCACGCGCGTCGGAGGCGAAGGAGGAACCCACCGCACCTACAGGGCGGTCGAGTGAGGGAGCTGCTGGCGGGTGGGTCTGGCAA CTCTTTGGGAGGCCGACGCGGGCGGACCGGCGGGTGCTGGGAACCGAGCCTCGGCTTGCGGCCGGCAGTTTCCGTGGGTCTGTGAAGAGG TCGGCGGCCCCTGCGGGCGCCAGTCAGCTTTAAGAAAAAGTAGAGATCACTTCTGACTGTACTGAACAGCAAAAATTAAGTGACTTGCTG CCCTGCACATCATGGCACTGCCATTCCGTAAGGACTTAGAAAAGTACAAAGACCTTGATGAAGATGAGCTCCTTGGGAATCTGTCAGAAA CAGAACTGAAACAACTGGAAACTGTTTTGGATGATCTTGACCCCGAGAATGCCCTTCTGCCTGCAGGGTTCCGGCAGAAGAACCAGACAT CAAAGTCCACCACAGGGCCATTTGATAGAGAGCATCTCCTTTCATATCTGGAGAAAGAAGCATTGGAGCATAAAGACAGGGAAGACTATG TGCCCTACACTGGAGAAAAAAAAGGGAAAATATTTATCCCCAAACAGAAACCTGTACAGACTTTTACAGAAGAAAAAGTGTCTCTTGATC CAGAATTAGAAGAAGCTTTGACAAGTGCTTCTGATACAGAATTGTGTGACCTCGCAGCAATTCTTGGGATGCACAATTTGATAACGAATA CAAAGTTCTGTAATATAATGGGAAGTAGTAATGGTGTTGACCAAGAACATTTTTCAAATGTGGTCAAAGGTGAAAAGATTCTTCCGGTAT TTGATGAGCCACCAAATCCAACCAATGTAGAAGAGAGTTTGAAGAGAACTAAAGAAAACGATGCTCATCTTGTTGAAGTTAATTTGAATA ATATAAAGAATATCCCAATTCCAACCCTAAAAGATTTTGCAAAGGCTTTGGAAACCAACACACATGTGAAATGTTTCAGTCTTGCAGCCA CCCGGAGCAATGACCCTGTTGCTACTGCTTTTGCAGAAATGCTGAAAGTGAACAAAACTTTGAAGAGCTTAAATGTGGAGTCCAACTTTA TCACGGGAGTTGGGATTCTGGCACTGATTGATGCGTTAAGAGATAATGAAACCCTGGCAGAGCTCAAGATTGACAATCAGAGGCAGCAGT TGGGGACAGCTGTAGAATTGGAAATGGCCAAGATGCTTGAGGAAAATACAAATATCCTTAAATTTGGATATCAGTTTACACAGCAGGGAC CACGAACCAGAGCAGCTAATGCTATAACAAAAAACAATGACTTAGAAAAATATTTTGATATGAAAAAGAACCAATGCAAAGAAGGTCTTG ACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTTGCAGAGCAAGTTGGAATTGACAGAGGTGATATAC CAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAAATCAAAGATTCTACAG CTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGAAAAGC AGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAA CAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTTCTACCCCTAGTTCTTCTAACA GCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCAACTGCTTCTCAGGTAG CAAGTACATGGGGAGGATTCACTCCTTCTCCAGTTGCACAGCCACACCCTTCAGCTGGCCTTAATGTTGACTTTGAATCTGTGTTTGGAA ATAAATCTACAAATGTTATTGTAGATTCTGGGGGCTTTGATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTCTCAGAACCAGAACC TTCCTGTTGCCAAACTCCCACCTAGCAAGTTAGTATCTGATGACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAA ATGGAACCACTAAGAATGATGTAAATTGGAGTCAACCAGGTGAAAAGAAGTTAACTGGGGGATCTAACTGGCAACCAAAGGTTGCACCAA CAACCGCTTGGAATGCTGCAACAATGGCACCCCCTGTAATGGCCTATCCTGCTACTACACCAACAGGCATGATAGGATATGGAATTCCTC CACAAATGGGAAGTGTTCCTGTAATGACGCAACCAACCTTAATATACAGCCAGCCTGTCATGAGACCTCCAAACCCCTTTGGCCCTGTAT CAGGAGCACAGATACAGTTTATGTAACTTGATGGAAGAAAATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTC CAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAAGG >In-frame_ENST00000308580_ENST00000528398_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(amino acids)=727AA_start in transcript=272_stop in transcript=2455 MHIMALPFRKDLEKYKDLDEDELLGNLSETELKQLETVLDDLDPENALLPAGFRQKNQTSKSTTGPFDREHLLSYLEKEALEHKDREDYV PYTGEKKGKIFIPKQKPVQTFTEEKVSLDPELEEALTSASDTELCDLAAILGMHNLITNTKFCNIMGSSNGVDQEHFSNVVKGEKILPVF DEPPNPTNVEESLKRTKENDAHLVEVNLNNIKNIPIPTLKDFAKALETNTHVKCFSLAATRSNDPVATAFAEMLKVNKTLKSLNVESNFI TGVGILALIDALRDNETLAELKIDNQRQQLGTAVELEMAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLEKYFDMKKNQCKEGLD IYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDEREKQ AALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTASQVA STWGGFTPSPVAQPHPSAGLNVDFESVFGNKSTNVIVDSGGFDELGGLLKPTVASQNQNLPVAKLPPSKLVSDDLDSSLANLVGNLGIGN GTTKNDVNWSQPGEKKLTGGSNWQPKVAPTTAWNAATMAPPVMAYPATTPTGMIGYGIPPQMGSVPVMTQPTLIYSQPVMRPPNPFGPVS -------------------------------------------------------------- >In-frame_ENST00000308580_ENST00000356360_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(transcript)=2605nt_BP=1305nt GAGTGCGCACGCGCGTCGGAGGCGAAGGAGGAACCCACCGCACCTACAGGGCGGTCGAGTGAGGGAGCTGCTGGCGGGTGGGTCTGGCAA CTCTTTGGGAGGCCGACGCGGGCGGACCGGCGGGTGCTGGGAACCGAGCCTCGGCTTGCGGCCGGCAGTTTCCGTGGGTCTGTGAAGAGG TCGGCGGCCCCTGCGGGCGCCAGTCAGCTTTAAGAAAAAGTAGAGATCACTTCTGACTGTACTGAACAGCAAAAATTAAGTGACTTGCTG CCCTGCACATCATGGCACTGCCATTCCGTAAGGACTTAGAAAAGTACAAAGACCTTGATGAAGATGAGCTCCTTGGGAATCTGTCAGAAA CAGAACTGAAACAACTGGAAACTGTTTTGGATGATCTTGACCCCGAGAATGCCCTTCTGCCTGCAGGGTTCCGGCAGAAGAACCAGACAT CAAAGTCCACCACAGGGCCATTTGATAGAGAGCATCTCCTTTCATATCTGGAGAAAGAAGCATTGGAGCATAAAGACAGGGAAGACTATG TGCCCTACACTGGAGAAAAAAAAGGGAAAATATTTATCCCCAAACAGAAACCTGTACAGACTTTTACAGAAGAAAAAGTGTCTCTTGATC CAGAATTAGAAGAAGCTTTGACAAGTGCTTCTGATACAGAATTGTGTGACCTCGCAGCAATTCTTGGGATGCACAATTTGATAACGAATA CAAAGTTCTGTAATATAATGGGAAGTAGTAATGGTGTTGACCAAGAACATTTTTCAAATGTGGTCAAAGGTGAAAAGATTCTTCCGGTAT TTGATGAGCCACCAAATCCAACCAATGTAGAAGAGAGTTTGAAGAGAACTAAAGAAAACGATGCTCATCTTGTTGAAGTTAATTTGAATA ATATAAAGAATATCCCAATTCCAACCCTAAAAGATTTTGCAAAGGCTTTGGAAACCAACACACATGTGAAATGTTTCAGTCTTGCAGCCA CCCGGAGCAATGACCCTGTTGCTACTGCTTTTGCAGAAATGCTGAAAGTGAACAAAACTTTGAAGAGCTTAAATGTGGAGTCCAACTTTA TCACGGGAGTTGGGATTCTGGCACTGATTGATGCGTTAAGAGATAATGAAACCCTGGCAGAGCTCAAGATTGACAATCAGAGGCAGCAGT TGGGGACAGCTGTAGAATTGGAAATGGCCAAGATGCTTGAGGAAAATACAAATATCCTTAAATTTGGATATCAGTTTACACAGCAGGGAC CACGAACCAGAGCAGCTAATGCTATAACAAAAAACAATGACTTAGAAAAATATTTTGATATGAAAAAGAACCAATGCAAAGAAGGTCTTG ACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAGTTGCAGAGCAAGTTGGAATTGACAGAGGTGATATAC CAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAAATCAAAGATTCTACAG CTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTGGTCTATCTCTGACCAAAGTGGATGAAAGGGAAAAGC AGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCCTAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAA CAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAGCCATTGACATATTTTCTACCCCTAGTTCTTCTAACA GCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACCCATCTGTACATCCTATGTCAACTGCTTCTCAGGTAG CAAGTACATGGGGAGATCCTTTCTCTGCTACTGTAGATGCTGTTGATGATGCCATTCCAAGCTTAAATCCTTTCCTCACAAAAAGTAGTG GTGATGTTCACCTTTCCATTTCTTCAGATGTATCTACTTTTACTACTAGGACACCTACTCATGAAATGTTTGTTGGATTCACTCCTTCTC CAGTTGCACAGCCACACCCTTCAGCTGGCCTTAATGTTGACTTTGAATCTGTGTTTGGAAATAAATCTACAAATGTTATTGTAGATTCTG GGGGCTTTGATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAAGT TAGTATCTGATGACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCACTAAGAATGATGTAAATTGGA GTCAACCAGGTGAAAAGAAGTTAACTGGGGGATCTAACTGGCAACCAAAGGTTGCACCAACAACCGCTTGGAATGCTGCAACAATGCCTC CACAAATGGGAAGTGTTCCTGTAATGACGCAACCAACCTTAATATACAGCCAGCCTGTCATGAGACCTCCAAACCCCTTTGGCCCTGTAT >In-frame_ENST00000308580_ENST00000356360_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(amino acids)=757AA_start in transcript=272_stop in transcript=2545 MHIMALPFRKDLEKYKDLDEDELLGNLSETELKQLETVLDDLDPENALLPAGFRQKNQTSKSTTGPFDREHLLSYLEKEALEHKDREDYV PYTGEKKGKIFIPKQKPVQTFTEEKVSLDPELEEALTSASDTELCDLAAILGMHNLITNTKFCNIMGSSNGVDQEHFSNVVKGEKILPVF DEPPNPTNVEESLKRTKENDAHLVEVNLNNIKNIPIPTLKDFAKALETNTHVKCFSLAATRSNDPVATAFAEMLKVNKTLKSLNVESNFI TGVGILALIDALRDNETLAELKIDNQRQQLGTAVELEMAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLEKYFDMKKNQCKEGLD IYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDEREKQ AALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTASQVA STWGDPFSATVDAVDDAIPSLNPFLTKSSGDVHLSISSDVSTFTTRTPTHEMFVGFTPSPVAQPHPSAGLNVDFESVFGNKSTNVIVDSG GFDELGGLLKPTVASQNQNLPVAKLPPSKLVSDDLDSSLANLVGNLGIGNGTTKNDVNWSQPGEKKLTGGSNWQPKVAPTTAWNAATMPP -------------------------------------------------------------- >In-frame_ENST00000544199_ENST00000532317_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(transcript)=3608nt_BP=1071nt GACTGTACTGAACAGCAAAAATTAAGTGACTTGCTGCCCTGCACATCATGGCACTGCCATTCCGTAAGGACTTAGAAAAGTACAAAGACC TTGATGAAGATGAGCTCCTTGGGAATCTGTCAGAAACAGAACTGAAACAACTGGAAACTGTTTTGGATGATCTTGACCCCGAGAATGCCC TTCTGCCTGCAGGGTTCCGGCAGAAGAACCAGACATCAAAGTCCACCACAGGGCCATTTGATAGAGAGCATCTCCTTTCATATCTGGAGA AAGAAGCATTGGAGCATAAAGACAGGGAAGACTATGTGCCCTACACTGGAGAAAAAAAAGGGAAAATATTTATCCCCAAACAGAAACCTG TACAGACTTTTACAGAAGAAAAAGTGTCTCTTGATCCAGAATTAGAAGAAGCTTTGACAAGTGCTTCTGATACAGAATTGTGTGACCTCG CAGCAATTCTTGGGATGCACAATTTGATAACGAATACAAAGTTCTGTAATATAATGGGAAGTAGTAATGGTGTTGACCAAGAACATTTTT CAAATGTGGTCAAAGGTGAAAAGATTCTTCCGGTATTTGATGAGCCACCAAATCCAACCAATGTAGAAGAGAGTTTGAAGAGAACTAAAG AAAACGATGCTCATCTTGTTGAAGTTAATTTGAATAATATAAAGAATATCCCAATTCCAACCCTAAAAGATTTTGCAAAGGCTTTGGAAA CCAACACACATGTGAAATGTTTCAGTCTTGCAGCCACCCGGAGCAATGACCCTGTTGCTACTGCTTTTGCAGAAATGCTGAAAGTGAACA AAACTTTGAAGAGCTTAAATGTGGAGTCCAACTTTATCACGGGAGTTGGGATTCTGGCACTGATTGATGCGTTAAGAGATAATGAAACCC TGGCAGAGCTCAAGATTGACAATCAGAGGCAGCAGTTGGGGACAGCTGTAGAATTGGAAATGGCCAAGATGCTTGAGGAAAATACAAATA TCCTTAAATTTGGATATCAGTTTACACAGCAGGGACCACGAACCAGAGCAGCTAATGCTATAACAAAAAACAATGACTTAGAAAAATATT TTGATATGAAAAAGAACCAATGCAAAGAAGGTCTTGACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAG TTGCAGAGCAAGTTGGAATTGACAGAGGTGATATACCAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAG CTTCCTTGGAAGGAAAGAAAATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTG GTCTATCTCTGACCAAAGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCC TAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAG CCATTGACATATTTTCTACCCCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACC CATCTGTACATCCTATGTCAACTGCTTCTCAGGTAGCAAGTACATGGGGAGGATTCACTCCTTCTCCAGTTGCACAGCCACACCCTTCAG CTGGCCTTAATGTTGACTTTGAATCTGTGTTTGGAAATAAATCTACAAATGTTATTGTAGATTCTGGGGGCTTTGATGAACTAGGTGGAC TTCTCAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAAGTTAGTATCTGATGACTTGGATTCAT CTTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCACTAAGAATGATGTAAATTGGAGTCAACCAGGTGAAAAGAAGTTAA CTGGGGGATCTAACTGGCAACCAAAGGTTGCACCAACAACCGCTTGGAATGCTGCAACAATGAATGGCATGCATTTTCCACAATACGCAC CCCCTGTAATGGCCTATCCTGCTACTACACCAACAGGCATGATAGGATATGGAATTCCTCCACAAATGGGAAGTGTTCCTGTAATGACGC AACCAACCTTAATATACAGCCAGCCTGTCATGAGACCTCCAAACCCCTTTGGCCCTGTATCAGGAGCACAGATACAGTTTATGTAACTTG ATGGAAGAAAATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAGCAAAATCCAAACTGCTGTCTCTTAAAT CTCTTAAACTCTCTTCTTCCATTAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAAGGAAATTGGGACTAGTTTATAGGAGAACGTAT CAATACAGTTTATAAAGCCAAGAATTGCTATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACCCTTCAATTCTTTCAACTCCTGT TAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGTGTGAAATTTGTATTTGGAAAAGCTGCCTGGAGAGAAGAACT GTGTCCTTTACTGTATTTCAACAGGACTCTTTTGGGGGATCAAAATTAAAATTCCTAATTATGCATTATCTTTCTTTTCTCCAGTCCTCA CAAATACAGAAACAATAACTGAAATTAACTTTTCTTTTTTTAAAAAAAATTATATTCAGTTTGCAGTAGACATTCCTTAAGTATTTGTAT TTATTTATGATTATCAATTTTACATAACATTAATATTGTATCAGACCTCCTTATGAAAATGAGTATGGATGTGCACAGTATGTTTGATTT TTATCCACAAGAATGAATCTGATTCAGAATGCTTTTCTCAGCTGACATACAGAGCACTAAATATTTTAAGGCAAGTCCATAGGTCTGAAT CTCTTAAGAATTCTCGGCCTCTGTGGGATTTAGGGAAGCATTATAAATGCATTAATCCTTATAGTCAATTCTGTGCCTAGGATTTTGCCA GGGAACAGTTCACTGACTAGGAAAAGCACTACATTTTAAATTCAGCATTAGTGCATTGGGAAGGATCTTTACTGCTTTGTGCTTGGCATG TCATTATTTTCCATTTGACATTAGGGCCTTTCCAAAATGAATGTGAGGAATTGCTTTCACTTCAAGACTTTCCTTCTTTTCACTAAAACT CTAGAAGGTGTTACAAGGGGGAGGGAAGGGGGGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGATCATATACCTTTTAA ATAAGGGGAAATAGTATCTTTAAAGTTAATGTCTAGCCAAGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTGATCGGTGCTTTGTGT AAATACATCTTTAACATTTGGGTGGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGAAAGCAATTCTGTACATGAGTTTAAGCATTCT TGTTGCATTGTCTCTGCAGATTCTATTTTTGTTTACAATATTAAAATGTATGTTAGCAAAATGGGTGGATTTTCAAATAAAATGCAGCTT >In-frame_ENST00000544199_ENST00000532317_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(amino acids)=735AA_start in transcript=38_stop in transcript=2245 MHIMALPFRKDLEKYKDLDEDELLGNLSETELKQLETVLDDLDPENALLPAGFRQKNQTSKSTTGPFDREHLLSYLEKEALEHKDREDYV PYTGEKKGKIFIPKQKPVQTFTEEKVSLDPELEEALTSASDTELCDLAAILGMHNLITNTKFCNIMGSSNGVDQEHFSNVVKGEKILPVF DEPPNPTNVEESLKRTKENDAHLVEVNLNNIKNIPIPTLKDFAKALETNTHVKCFSLAATRSNDPVATAFAEMLKVNKTLKSLNVESNFI TGVGILALIDALRDNETLAELKIDNQRQQLGTAVELEMAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLEKYFDMKKNQCKEGLD IYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDEREKQ AALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTASQVA STWGGFTPSPVAQPHPSAGLNVDFESVFGNKSTNVIVDSGGFDELGGLLKPTVASQNQNLPVAKLPPSKLVSDDLDSSLANLVGNLGIGN GTTKNDVNWSQPGEKKLTGGSNWQPKVAPTTAWNAATMNGMHFPQYAPPVMAYPATTPTGMIGYGIPPQMGSVPVMTQPTLIYSQPVMRP -------------------------------------------------------------- >In-frame_ENST00000544199_ENST00000526033_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(transcript)=3709nt_BP=1071nt GACTGTACTGAACAGCAAAAATTAAGTGACTTGCTGCCCTGCACATCATGGCACTGCCATTCCGTAAGGACTTAGAAAAGTACAAAGACC TTGATGAAGATGAGCTCCTTGGGAATCTGTCAGAAACAGAACTGAAACAACTGGAAACTGTTTTGGATGATCTTGACCCCGAGAATGCCC TTCTGCCTGCAGGGTTCCGGCAGAAGAACCAGACATCAAAGTCCACCACAGGGCCATTTGATAGAGAGCATCTCCTTTCATATCTGGAGA AAGAAGCATTGGAGCATAAAGACAGGGAAGACTATGTGCCCTACACTGGAGAAAAAAAAGGGAAAATATTTATCCCCAAACAGAAACCTG TACAGACTTTTACAGAAGAAAAAGTGTCTCTTGATCCAGAATTAGAAGAAGCTTTGACAAGTGCTTCTGATACAGAATTGTGTGACCTCG CAGCAATTCTTGGGATGCACAATTTGATAACGAATACAAAGTTCTGTAATATAATGGGAAGTAGTAATGGTGTTGACCAAGAACATTTTT CAAATGTGGTCAAAGGTGAAAAGATTCTTCCGGTATTTGATGAGCCACCAAATCCAACCAATGTAGAAGAGAGTTTGAAGAGAACTAAAG AAAACGATGCTCATCTTGTTGAAGTTAATTTGAATAATATAAAGAATATCCCAATTCCAACCCTAAAAGATTTTGCAAAGGCTTTGGAAA CCAACACACATGTGAAATGTTTCAGTCTTGCAGCCACCCGGAGCAATGACCCTGTTGCTACTGCTTTTGCAGAAATGCTGAAAGTGAACA AAACTTTGAAGAGCTTAAATGTGGAGTCCAACTTTATCACGGGAGTTGGGATTCTGGCACTGATTGATGCGTTAAGAGATAATGAAACCC TGGCAGAGCTCAAGATTGACAATCAGAGGCAGCAGTTGGGGACAGCTGTAGAATTGGAAATGGCCAAGATGCTTGAGGAAAATACAAATA TCCTTAAATTTGGATATCAGTTTACACAGCAGGGACCACGAACCAGAGCAGCTAATGCTATAACAAAAAACAATGACTTAGAAAAATATT TTGATATGAAAAAGAACCAATGCAAAGAAGGTCTTGACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAG TTGCAGAGCAAGTTGGAATTGACAGAGGTGATATACCAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAG CTTCCTTGGAAGGAAAGAAAATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTG GTCTATCTCTGACCAAAGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCC TAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAG CCATTGACATATTTTCTACCCCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACC CATCTGTACATCCTATGTCAACTGCTTCTCAGGTAGCAAGTACATGGGGAGATGCTGTTGATGATGCCATTCCAAGCTTAAATCCTTTCC TCACAAAAAGTAGTGGTGATGTTCACCTTTCCATTTCTTCAGATGTATCTACTTTTACTACTAGGACACCTACTCATGAAATGTTTGTTG GATTCACTCCTTCTCCAGTTGCACAGCCACACCCTTCAGCTGGCCTTAATGTTGACTTTGAATCTGTGTTTGGAAATAAATCTACAAATG TTATTGTAGATTCTGGGGGCTTTGATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCCTGTTGCCAAAC TCCCACCTAGCAAGTTAGTATCTGATGACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCACTAAGA ATGATGTAAATTGGAGTCAACCAGGTGAAAAGAAGTTAACTGGGGGATCTAACTGGCAACCAAAGGTTGCACCAACAACCGCTTGGAATG CTGCAACAATGGCACCCCCTGTAATGGCCTATCCTGCTACTACACCAACAGGCATGATAGGATATGGAATTCCTCCACAAATGGGAAGTG TTCCTGTAATGACGCAACCAACCTTAATATACAGCCAGCCTGTCATGAGACCTCCAAACCCCTTTGGCCCTGTATCAGGAGCACAGATAC AGTTTATGTAACTTGATGGAAGAAAATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAGCAAAATCCAAAC TGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGAATGCTACAAGTAACTCAGTGAAGGCCCATGAAGGAAATTGGGACTAGTT TATAGGAGAACGTATCAATACAGTTTATAAAGCCAAGAATTGCTATGATTTAAGACTAAGATCTGTCTTTTTGGTGACTAACCCTTCAAT TCTTTCAACTCCTGTTAATACCCATAATCAGTAACCTATCAAGAAAAGCCCTTATTTGGAAAGTGTGAAATTTGTATTTGGAAAAGCTGC CTGGAGAGAAGAACTGTGTCCTTTACTGTATTTCAACAGGACTCTTTTGGGGGATCAAAATTAAAATTCCTAATTATGCATTATCTTTCT TTTCTCCAGTCCTCACAAATACAGAAACAATAACTGAAATTAACTTTTCTTTTTTTAAAAAAAATTATATTCAGTTTGCAGTAGACATTC CTTAAGTATTTGTATTTATTTATGATTATCAATTTTACATAACATTAATATTGTATCAGACCTCCTTATGAAAATGAGTATGGATGTGCA CAGTATGTTTGATTTTTATCCACAAGAATGAATCTGATTCAGAATGCTTTTCTCAGCTGACATACAGAGCACTAAATATTTTAAGGCAAG TCCATAGGTCTGAATCTCTTAAGAATTCTCGGCCTCTGTGGGATTTAGGGAAGCATTATAAATGCATTAATCCTTATAGTCAATTCTGTG CCTAGGATTTTGCCAGGGAACAGTTCACTGACTAGGAAAAGCACTACATTTTAAATTCAGCATTAGTGCATTGGGAAGGATCTTTACTGC TTTGTGCTTGGCATGTCATTATTTTCCATTTGACATTAGGGCCTTTCCAAAATGAATGTGAGGAATTGCTTTCACTTCAAGACTTTCCTT CTTTTCACTAAAACTCTAGAAGGTGTTACAAGGGGGAGGGAAGGGGGGCAAAGTCCTTGAACATTTTCTTTGGCTCGTGCCATGTTATGA TCATATACCTTTTAAATAAGGGGAAATAGTATCTTTAAAGTTAATGTCTAGCCAAGAGTTTAGTAAACGAAGAATTAAACTGCACTGTTG ATCGGTGCTTTGTGTAAATACATCTTTAACATTTGGGTGGAGAGGGGCCTTAAGAAGGACAGTTCATTGTAGGAAAGCAATTCTGTACAT GAGTTTAAGCATTCTTGTTGCATTGTCTCTGCAGATTCTATTTTTGTTTACAATATTAAAATGTATGTTAGCAAAATGGGTGGATTTTCA >In-frame_ENST00000544199_ENST00000526033_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(amino acids)=770AA_start in transcript=38_stop in transcript=2350 MHIMALPFRKDLEKYKDLDEDELLGNLSETELKQLETVLDDLDPENALLPAGFRQKNQTSKSTTGPFDREHLLSYLEKEALEHKDREDYV PYTGEKKGKIFIPKQKPVQTFTEEKVSLDPELEEALTSASDTELCDLAAILGMHNLITNTKFCNIMGSSNGVDQEHFSNVVKGEKILPVF DEPPNPTNVEESLKRTKENDAHLVEVNLNNIKNIPIPTLKDFAKALETNTHVKCFSLAATRSNDPVATAFAEMLKVNKTLKSLNVESNFI TGVGILALIDALRDNETLAELKIDNQRQQLGTAVELEMAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLEKYFDMKKNQCKEGLD IYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDEREKQ AALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTASQVA STWGDAVDDAIPSLNPFLTKSSGDVHLSISSDVSTFTTRTPTHEMFVGFTPSPVAQPHPSAGLNVDFESVFGNKSTNVIVDSGGFDELGG LLKPTVASQNQNLPVAKLPPSKLVSDDLDSSLANLVGNLGIGNGTTKNDVNWSQPGEKKLTGGSNWQPKVAPTTAWNAATMAPPVMAYPA -------------------------------------------------------------- >In-frame_ENST00000544199_ENST00000393346_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(transcript)=2604nt_BP=1071nt GACTGTACTGAACAGCAAAAATTAAGTGACTTGCTGCCCTGCACATCATGGCACTGCCATTCCGTAAGGACTTAGAAAAGTACAAAGACC TTGATGAAGATGAGCTCCTTGGGAATCTGTCAGAAACAGAACTGAAACAACTGGAAACTGTTTTGGATGATCTTGACCCCGAGAATGCCC TTCTGCCTGCAGGGTTCCGGCAGAAGAACCAGACATCAAAGTCCACCACAGGGCCATTTGATAGAGAGCATCTCCTTTCATATCTGGAGA AAGAAGCATTGGAGCATAAAGACAGGGAAGACTATGTGCCCTACACTGGAGAAAAAAAAGGGAAAATATTTATCCCCAAACAGAAACCTG TACAGACTTTTACAGAAGAAAAAGTGTCTCTTGATCCAGAATTAGAAGAAGCTTTGACAAGTGCTTCTGATACAGAATTGTGTGACCTCG CAGCAATTCTTGGGATGCACAATTTGATAACGAATACAAAGTTCTGTAATATAATGGGAAGTAGTAATGGTGTTGACCAAGAACATTTTT CAAATGTGGTCAAAGGTGAAAAGATTCTTCCGGTATTTGATGAGCCACCAAATCCAACCAATGTAGAAGAGAGTTTGAAGAGAACTAAAG AAAACGATGCTCATCTTGTTGAAGTTAATTTGAATAATATAAAGAATATCCCAATTCCAACCCTAAAAGATTTTGCAAAGGCTTTGGAAA CCAACACACATGTGAAATGTTTCAGTCTTGCAGCCACCCGGAGCAATGACCCTGTTGCTACTGCTTTTGCAGAAATGCTGAAAGTGAACA AAACTTTGAAGAGCTTAAATGTGGAGTCCAACTTTATCACGGGAGTTGGGATTCTGGCACTGATTGATGCGTTAAGAGATAATGAAACCC TGGCAGAGCTCAAGATTGACAATCAGAGGCAGCAGTTGGGGACAGCTGTAGAATTGGAAATGGCCAAGATGCTTGAGGAAAATACAAATA TCCTTAAATTTGGATATCAGTTTACACAGCAGGGACCACGAACCAGAGCAGCTAATGCTATAACAAAAAACAATGACTTAGAAAAATATT TTGATATGAAAAAGAACCAATGCAAAGAAGGTCTTGACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAG TTGCAGAGCAAGTTGGAATTGACAGAGGTGATATACCAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAG CTTCCTTGGAAGGAAAGAAAATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTG GTCTATCTCTGACCAAAGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCC TAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAG CCATTGACATATTTTCTACCCCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACC CATCTGTACATCCTATGTCAACTGCTTCTCAGGTAGCAAGTACATGGGGAGATCCTTTCTCTGCTACTGTAGATGCTGTTGATGATGCCA TTCCAAGCTTAAATCCTTTCCTCACAAAAAGTAGTGGTGATGTTCACCTTTCCATTTCTTCAGATGTATCTACTTTTACTACTAGGACAC CTACTCATGAAATGTTTGTTGGATTCACTCCTTCTCCAGTTGCACAGCCACACCCTTCAGCTGGCCTTAATGTTGACTTTGAATCTGTGT TTGGAAATAAATCTACAAATGTTATTGTAGATTCTGGGGGCTTTGATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTCTCAGAACC AGAACCTTCCTGTTGCCAAACTCCCACCTAGCAAGTTAGTATCTGATGACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCTTGGCA TCGGAAATGGAACCACTAAGAATGATGTAAATTGGAGTCAACCAGGTGAAAAGAAGTTAACTGGGGGATCTAACTGGCAACCAAAGGTTG CACCAACAACCGCTTGGAATGCTGCAACAATGGCACCCCCTGTAATGGCCTATCCTGCTACTACACCAACAGGCATGATAGGATATGGAA TTCCTCCACAAATGGGAAGTGTTCCTGTAATGACGCAACCAACCTTAATATACAGCCAGCCTGTCATGAGACCTCCAAACCCCTTTGGCC CTGTATCAGGAGCACAGATACAGTTTATGTAACTTGATGGAAGAAAATGGAATTACTCCAAAAAGACAAGTGCTCAAGCAGCAAAATCCT TACTTCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTAGAATGCTACAAGTAACTCAGTGAAGGCCCA >In-frame_ENST00000544199_ENST00000393346_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(amino acids)=777AA_start in transcript=38_stop in transcript=2371 MHIMALPFRKDLEKYKDLDEDELLGNLSETELKQLETVLDDLDPENALLPAGFRQKNQTSKSTTGPFDREHLLSYLEKEALEHKDREDYV PYTGEKKGKIFIPKQKPVQTFTEEKVSLDPELEEALTSASDTELCDLAAILGMHNLITNTKFCNIMGSSNGVDQEHFSNVVKGEKILPVF DEPPNPTNVEESLKRTKENDAHLVEVNLNNIKNIPIPTLKDFAKALETNTHVKCFSLAATRSNDPVATAFAEMLKVNKTLKSLNVESNFI TGVGILALIDALRDNETLAELKIDNQRQQLGTAVELEMAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLEKYFDMKKNQCKEGLD IYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDEREKQ AALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTASQVA STWGDPFSATVDAVDDAIPSLNPFLTKSSGDVHLSISSDVSTFTTRTPTHEMFVGFTPSPVAQPHPSAGLNVDFESVFGNKSTNVIVDSG GFDELGGLLKPTVASQNQNLPVAKLPPSKLVSDDLDSSLANLVGNLGIGNGTTKNDVNWSQPGEKKLTGGSNWQPKVAPTTAWNAATMAP -------------------------------------------------------------- >In-frame_ENST00000544199_ENST00000528398_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(transcript)=2429nt_BP=1071nt GACTGTACTGAACAGCAAAAATTAAGTGACTTGCTGCCCTGCACATCATGGCACTGCCATTCCGTAAGGACTTAGAAAAGTACAAAGACC TTGATGAAGATGAGCTCCTTGGGAATCTGTCAGAAACAGAACTGAAACAACTGGAAACTGTTTTGGATGATCTTGACCCCGAGAATGCCC TTCTGCCTGCAGGGTTCCGGCAGAAGAACCAGACATCAAAGTCCACCACAGGGCCATTTGATAGAGAGCATCTCCTTTCATATCTGGAGA AAGAAGCATTGGAGCATAAAGACAGGGAAGACTATGTGCCCTACACTGGAGAAAAAAAAGGGAAAATATTTATCCCCAAACAGAAACCTG TACAGACTTTTACAGAAGAAAAAGTGTCTCTTGATCCAGAATTAGAAGAAGCTTTGACAAGTGCTTCTGATACAGAATTGTGTGACCTCG CAGCAATTCTTGGGATGCACAATTTGATAACGAATACAAAGTTCTGTAATATAATGGGAAGTAGTAATGGTGTTGACCAAGAACATTTTT CAAATGTGGTCAAAGGTGAAAAGATTCTTCCGGTATTTGATGAGCCACCAAATCCAACCAATGTAGAAGAGAGTTTGAAGAGAACTAAAG AAAACGATGCTCATCTTGTTGAAGTTAATTTGAATAATATAAAGAATATCCCAATTCCAACCCTAAAAGATTTTGCAAAGGCTTTGGAAA CCAACACACATGTGAAATGTTTCAGTCTTGCAGCCACCCGGAGCAATGACCCTGTTGCTACTGCTTTTGCAGAAATGCTGAAAGTGAACA AAACTTTGAAGAGCTTAAATGTGGAGTCCAACTTTATCACGGGAGTTGGGATTCTGGCACTGATTGATGCGTTAAGAGATAATGAAACCC TGGCAGAGCTCAAGATTGACAATCAGAGGCAGCAGTTGGGGACAGCTGTAGAATTGGAAATGGCCAAGATGCTTGAGGAAAATACAAATA TCCTTAAATTTGGATATCAGTTTACACAGCAGGGACCACGAACCAGAGCAGCTAATGCTATAACAAAAAACAATGACTTAGAAAAATATT TTGATATGAAAAAGAACCAATGCAAAGAAGGTCTTGACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAG TTGCAGAGCAAGTTGGAATTGACAGAGGTGATATACCAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAG CTTCCTTGGAAGGAAAGAAAATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTG GTCTATCTCTGACCAAAGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCC TAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAG CCATTGACATATTTTCTACCCCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACC CATCTGTACATCCTATGTCAACTGCTTCTCAGGTAGCAAGTACATGGGGAGGATTCACTCCTTCTCCAGTTGCACAGCCACACCCTTCAG CTGGCCTTAATGTTGACTTTGAATCTGTGTTTGGAAATAAATCTACAAATGTTATTGTAGATTCTGGGGGCTTTGATGAACTAGGTGGAC TTCTCAAACCAACAGTGGCCTCTCAGAACCAGAACCTTCCTGTTGCCAAACTCCCACCTAGCAAGTTAGTATCTGATGACTTGGATTCAT CTTTAGCCAACCTTGTGGGCAATCTTGGCATCGGAAATGGAACCACTAAGAATGATGTAAATTGGAGTCAACCAGGTGAAAAGAAGTTAA CTGGGGGATCTAACTGGCAACCAAAGGTTGCACCAACAACCGCTTGGAATGCTGCAACAATGGCACCCCCTGTAATGGCCTATCCTGCTA CTACACCAACAGGCATGATAGGATATGGAATTCCTCCACAAATGGGAAGTGTTCCTGTAATGACGCAACCAACCTTAATATACAGCCAGC CTGTCATGAGACCTCCAAACCCCTTTGGCCCTGTATCAGGAGCACAGATACAGTTTATGTAACTTGATGGAAGAAAATGGAATTACTCCA AAAAGACAAGTGCTCAAGCAGCAAAATCCTTACTTCCAGCAAAATCCAAACTGCTGTCTCTTAAATCTCTTAAACTCTCTTCTTCCATTA >In-frame_ENST00000544199_ENST00000528398_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(amino acids)=727AA_start in transcript=38_stop in transcript=2221 MHIMALPFRKDLEKYKDLDEDELLGNLSETELKQLETVLDDLDPENALLPAGFRQKNQTSKSTTGPFDREHLLSYLEKEALEHKDREDYV PYTGEKKGKIFIPKQKPVQTFTEEKVSLDPELEEALTSASDTELCDLAAILGMHNLITNTKFCNIMGSSNGVDQEHFSNVVKGEKILPVF DEPPNPTNVEESLKRTKENDAHLVEVNLNNIKNIPIPTLKDFAKALETNTHVKCFSLAATRSNDPVATAFAEMLKVNKTLKSLNVESNFI TGVGILALIDALRDNETLAELKIDNQRQQLGTAVELEMAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLEKYFDMKKNQCKEGLD IYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDEREKQ AALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTASQVA STWGGFTPSPVAQPHPSAGLNVDFESVFGNKSTNVIVDSGGFDELGGLLKPTVASQNQNLPVAKLPPSKLVSDDLDSSLANLVGNLGIGN GTTKNDVNWSQPGEKKLTGGSNWQPKVAPTTAWNAATMAPPVMAYPATTPTGMIGYGIPPQMGSVPVMTQPTLIYSQPVMRPPNPFGPVS -------------------------------------------------------------- >In-frame_ENST00000544199_ENST00000356360_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(transcript)=2371nt_BP=1071nt GACTGTACTGAACAGCAAAAATTAAGTGACTTGCTGCCCTGCACATCATGGCACTGCCATTCCGTAAGGACTTAGAAAAGTACAAAGACC TTGATGAAGATGAGCTCCTTGGGAATCTGTCAGAAACAGAACTGAAACAACTGGAAACTGTTTTGGATGATCTTGACCCCGAGAATGCCC TTCTGCCTGCAGGGTTCCGGCAGAAGAACCAGACATCAAAGTCCACCACAGGGCCATTTGATAGAGAGCATCTCCTTTCATATCTGGAGA AAGAAGCATTGGAGCATAAAGACAGGGAAGACTATGTGCCCTACACTGGAGAAAAAAAAGGGAAAATATTTATCCCCAAACAGAAACCTG TACAGACTTTTACAGAAGAAAAAGTGTCTCTTGATCCAGAATTAGAAGAAGCTTTGACAAGTGCTTCTGATACAGAATTGTGTGACCTCG CAGCAATTCTTGGGATGCACAATTTGATAACGAATACAAAGTTCTGTAATATAATGGGAAGTAGTAATGGTGTTGACCAAGAACATTTTT CAAATGTGGTCAAAGGTGAAAAGATTCTTCCGGTATTTGATGAGCCACCAAATCCAACCAATGTAGAAGAGAGTTTGAAGAGAACTAAAG AAAACGATGCTCATCTTGTTGAAGTTAATTTGAATAATATAAAGAATATCCCAATTCCAACCCTAAAAGATTTTGCAAAGGCTTTGGAAA CCAACACACATGTGAAATGTTTCAGTCTTGCAGCCACCCGGAGCAATGACCCTGTTGCTACTGCTTTTGCAGAAATGCTGAAAGTGAACA AAACTTTGAAGAGCTTAAATGTGGAGTCCAACTTTATCACGGGAGTTGGGATTCTGGCACTGATTGATGCGTTAAGAGATAATGAAACCC TGGCAGAGCTCAAGATTGACAATCAGAGGCAGCAGTTGGGGACAGCTGTAGAATTGGAAATGGCCAAGATGCTTGAGGAAAATACAAATA TCCTTAAATTTGGATATCAGTTTACACAGCAGGGACCACGAACCAGAGCAGCTAATGCTATAACAAAAAACAATGACTTAGAAAAATATT TTGATATGAAAAAGAACCAATGCAAAGAAGGTCTTGACATCTATAAGAAGTTCCTAACTAGGATGACAAGAATCTCAGAGTTCCTCAAAG TTGCAGAGCAAGTTGGAATTGACAGAGGTGATATACCAGACCTTTCACAGGCCCCTAGCAGTCTTCTTGATGCTTTGGAACAACATTTAG CTTCCTTGGAAGGAAAGAAAATCAAAGATTCTACAGCTGCAAGCAGGGCAACTACACTTTCCAATGCAGTGTCTTCCCTGGCAAGCACTG GTCTATCTCTGACCAAAGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAGGCACGTTTGAAAGCTTTAAAGGAACAGCGCC TAAAAGAACTTGCAAAGAAACCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTATCCACCTCAGCAGGAGGGATAATGACTGCACCAG CCATTGACATATTTTCTACCCCTAGTTCTTCTAACAGCACATCAAAGCTGCCCAATGATCTGCTTGATTTGCAGCAGCCAACTTTTCACC CATCTGTACATCCTATGTCAACTGCTTCTCAGGTAGCAAGTACATGGGGAGATCCTTTCTCTGCTACTGTAGATGCTGTTGATGATGCCA TTCCAAGCTTAAATCCTTTCCTCACAAAAAGTAGTGGTGATGTTCACCTTTCCATTTCTTCAGATGTATCTACTTTTACTACTAGGACAC CTACTCATGAAATGTTTGTTGGATTCACTCCTTCTCCAGTTGCACAGCCACACCCTTCAGCTGGCCTTAATGTTGACTTTGAATCTGTGT TTGGAAATAAATCTACAAATGTTATTGTAGATTCTGGGGGCTTTGATGAACTAGGTGGACTTCTCAAACCAACAGTGGCCTCTCAGAACC AGAACCTTCCTGTTGCCAAACTCCCACCTAGCAAGTTAGTATCTGATGACTTGGATTCATCTTTAGCCAACCTTGTGGGCAATCTTGGCA TCGGAAATGGAACCACTAAGAATGATGTAAATTGGAGTCAACCAGGTGAAAAGAAGTTAACTGGGGGATCTAACTGGCAACCAAAGGTTG CACCAACAACCGCTTGGAATGCTGCAACAATGCCTCCACAAATGGGAAGTGTTCCTGTAATGACGCAACCAACCTTAATATACAGCCAGC CTGTCATGAGACCTCCAAACCCCTTTGGCCCTGTATCAGGAGCACAGATACAGTTTATGTAACTTGATGGAAGAAAATGGAATTACTCCA >In-frame_ENST00000544199_ENST00000356360_TCGA-06-0878-01A_TMOD3_chr15_52194233_+_PICALM_chr11_85722179_length(amino acids)=757AA_start in transcript=38_stop in transcript=2311 MHIMALPFRKDLEKYKDLDEDELLGNLSETELKQLETVLDDLDPENALLPAGFRQKNQTSKSTTGPFDREHLLSYLEKEALEHKDREDYV PYTGEKKGKIFIPKQKPVQTFTEEKVSLDPELEEALTSASDTELCDLAAILGMHNLITNTKFCNIMGSSNGVDQEHFSNVVKGEKILPVF DEPPNPTNVEESLKRTKENDAHLVEVNLNNIKNIPIPTLKDFAKALETNTHVKCFSLAATRSNDPVATAFAEMLKVNKTLKSLNVESNFI TGVGILALIDALRDNETLAELKIDNQRQQLGTAVELEMAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLEKYFDMKKNQCKEGLD IYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDEREKQ AALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDLQQPTFHPSVHPMSTASQVA STWGDPFSATVDAVDDAIPSLNPFLTKSSGDVHLSISSDVSTFTTRTPTHEMFVGFTPSPVAQPHPSAGLNVDFESVFGNKSTNVIVDSG GFDELGGLLKPTVASQNQNLPVAKLPPSKLVSDDLDSSLANLVGNLGIGNGTTKNDVNWSQPGEKKLTGGSNWQPKVAPTTAWNAATMPP -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for TMOD3-PICALM |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Tgene | PICALM | chr15:52194233 | chr11:85722179 | ENST00000356360 | 5 | 19 | 221_294 | 219.33333333333334 | 633.0 | PIMREG | |
Tgene | PICALM | chr15:52194233 | chr11:85722179 | ENST00000393346 | 5 | 20 | 221_294 | 219.33333333333334 | 653.0 | PIMREG | |
Tgene | PICALM | chr15:52194233 | chr11:85722179 | ENST00000526033 | 5 | 20 | 221_294 | 219.33333333333334 | 646.0 | PIMREG | |
Tgene | PICALM | chr15:52194233 | chr11:85722179 | ENST00000528398 | 5 | 19 | 221_294 | 168.33333333333334 | 552.0 | PIMREG | |
Tgene | PICALM | chr15:52194233 | chr11:85722179 | ENST00000532317 | 5 | 20 | 221_294 | 219.33333333333334 | 611.0 | PIMREG |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for TMOD3-PICALM |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for TMOD3-PICALM |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | PICALM | C0002395 | Alzheimer's Disease | 2 | CTD_human |
Tgene | PICALM | C0011265 | Presenile dementia | 2 | CTD_human |
Tgene | PICALM | C0276496 | Familial Alzheimer Disease (FAD) | 2 | CTD_human |
Tgene | PICALM | C0494463 | Alzheimer Disease, Late Onset | 2 | CTD_human |
Tgene | PICALM | C0546126 | Acute Confusional Senile Dementia | 2 | CTD_human |
Tgene | PICALM | C0750900 | Alzheimer's Disease, Focal Onset | 2 | CTD_human |
Tgene | PICALM | C0750901 | Alzheimer Disease, Early Onset | 2 | CTD_human |
Tgene | PICALM | C0234985 | Mental deterioration | 1 | CTD_human |
Tgene | PICALM | C0338656 | Impaired cognition | 1 | CTD_human |
Tgene | PICALM | C1270972 | Mild cognitive disorder | 1 | CTD_human |