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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:TNS1-CD46 (FusionGDB2 ID:92271) |
Fusion Gene Summary for TNS1-CD46 |
Fusion gene summary |
Fusion gene information | Fusion gene name: TNS1-CD46 | Fusion gene ID: 92271 | Hgene | Tgene | Gene symbol | TNS1 | CD46 | Gene ID | 7145 | 4179 |
Gene name | tensin 1 | CD46 molecule | |
Synonyms | MST091|MST122|MST127|MSTP091|MSTP122|MSTP127|MXRA6|PPP1R155|TNS | AHUS2|MCP|MIC10|TLX|TRA2.10 | |
Cytomap | 2q35 | 1q32.2 | |
Type of gene | protein-coding | protein-coding | |
Description | tensin-1Matrix-remodelling-associated protein 6matrix-remodelling associated 6protein phosphatase 1, regulatory subunit 155 | membrane cofactor proteinCD46 antigen, complement regulatory proteinCD46 molecule, complement regulatory proteinantigen identified by monoclonal antibody TRA-2-10complement membrane cofactor proteinmeasles virus receptormembrane cofactor protein (CD | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | P15529 | |
Ensembl transtripts involved in fusion gene | ENST00000171887, ENST00000419504, ENST00000430930, ENST00000310858, ENST00000480665, | ENST00000367042, ENST00000354848, ENST00000441839, ENST00000322875, ENST00000367041, ENST00000358170, ENST00000322918, ENST00000361067, ENST00000367047, ENST00000357714, ENST00000469535, ENST00000360212, ENST00000480003, | |
Fusion gene scores | * DoF score | 13 X 13 X 8=1352 | 16 X 13 X 7=1456 |
# samples | 14 | 17 | |
** MAII score | log2(14/1352*10)=-3.27159641933722 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(17/1456*10)=-3.098403704061 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: TNS1 [Title/Abstract] AND CD46 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | TNS1(218745621)-CD46(207930359), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | CD46 | GO:0008593 | regulation of Notch signaling pathway | 23086448 |
Tgene | CD46 | GO:0010629 | negative regulation of gene expression | 23086448 |
Tgene | CD46 | GO:0032613 | interleukin-10 production | 23086448 |
Tgene | CD46 | GO:0032733 | positive regulation of interleukin-10 production | 12540904 |
Tgene | CD46 | GO:0035581 | sequestering of extracellular ligand from receptor | 23086448 |
Tgene | CD46 | GO:0042102 | positive regulation of T cell proliferation | 12540904 |
Tgene | CD46 | GO:0043382 | positive regulation of memory T cell differentiation | 12540904 |
Tgene | CD46 | GO:0045591 | positive regulation of regulatory T cell differentiation | 12540904 |
Tgene | CD46 | GO:0071636 | positive regulation of transforming growth factor beta production | 12540904 |
Fusion gene breakpoints across TNS1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across CD46 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | STAD | TCGA-BR-8080-01A | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
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Fusion Gene ORF analysis for TNS1-CD46 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000171887 | ENST00000367042 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000171887 | ENST00000354848 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000171887 | ENST00000441839 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000171887 | ENST00000322875 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000171887 | ENST00000367041 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000171887 | ENST00000358170 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000171887 | ENST00000322918 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000171887 | ENST00000361067 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-intron | ENST00000171887 | ENST00000367047 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-intron | ENST00000171887 | ENST00000357714 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-3UTR | ENST00000171887 | ENST00000469535 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-3UTR | ENST00000171887 | ENST00000360212 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-3UTR | ENST00000171887 | ENST00000480003 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000419504 | ENST00000367042 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000419504 | ENST00000354848 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000419504 | ENST00000441839 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000419504 | ENST00000322875 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000419504 | ENST00000367041 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000419504 | ENST00000358170 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000419504 | ENST00000322918 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000419504 | ENST00000361067 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-intron | ENST00000419504 | ENST00000367047 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-intron | ENST00000419504 | ENST00000357714 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-3UTR | ENST00000419504 | ENST00000469535 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-3UTR | ENST00000419504 | ENST00000360212 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-3UTR | ENST00000419504 | ENST00000480003 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000430930 | ENST00000367042 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000430930 | ENST00000354848 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000430930 | ENST00000441839 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000430930 | ENST00000322875 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000430930 | ENST00000367041 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000430930 | ENST00000358170 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000430930 | ENST00000322918 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
Frame-shift | ENST00000430930 | ENST00000361067 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-intron | ENST00000430930 | ENST00000367047 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-intron | ENST00000430930 | ENST00000357714 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-3UTR | ENST00000430930 | ENST00000469535 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-3UTR | ENST00000430930 | ENST00000360212 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-3UTR | ENST00000430930 | ENST00000480003 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
In-frame | ENST00000310858 | ENST00000367042 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
In-frame | ENST00000310858 | ENST00000354848 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
In-frame | ENST00000310858 | ENST00000441839 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
In-frame | ENST00000310858 | ENST00000322875 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
In-frame | ENST00000310858 | ENST00000367041 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
In-frame | ENST00000310858 | ENST00000358170 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
In-frame | ENST00000310858 | ENST00000322918 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
In-frame | ENST00000310858 | ENST00000361067 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-intron | ENST00000310858 | ENST00000367047 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-intron | ENST00000310858 | ENST00000357714 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-3UTR | ENST00000310858 | ENST00000469535 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-3UTR | ENST00000310858 | ENST00000360212 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
5CDS-3UTR | ENST00000310858 | ENST00000480003 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
intron-3CDS | ENST00000480665 | ENST00000367042 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
intron-3CDS | ENST00000480665 | ENST00000354848 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
intron-3CDS | ENST00000480665 | ENST00000441839 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
intron-3CDS | ENST00000480665 | ENST00000322875 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
intron-3CDS | ENST00000480665 | ENST00000367041 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
intron-3CDS | ENST00000480665 | ENST00000358170 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
intron-3CDS | ENST00000480665 | ENST00000322918 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
intron-3CDS | ENST00000480665 | ENST00000361067 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
intron-intron | ENST00000480665 | ENST00000367047 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
intron-intron | ENST00000480665 | ENST00000357714 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
intron-3UTR | ENST00000480665 | ENST00000469535 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
intron-3UTR | ENST00000480665 | ENST00000360212 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
intron-3UTR | ENST00000480665 | ENST00000480003 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000310858 | TNS1 | chr2 | 218745621 | - | ENST00000367042 | CD46 | chr1 | 207930359 | + | 4392 | 1319 | 118 | 2355 | 745 |
ENST00000310858 | TNS1 | chr2 | 218745621 | - | ENST00000354848 | CD46 | chr1 | 207930359 | + | 4299 | 1319 | 118 | 2376 | 752 |
ENST00000310858 | TNS1 | chr2 | 218745621 | - | ENST00000441839 | CD46 | chr1 | 207930359 | + | 4235 | 1319 | 118 | 2316 | 732 |
ENST00000310858 | TNS1 | chr2 | 218745621 | - | ENST00000322875 | CD46 | chr1 | 207930359 | + | 4344 | 1319 | 118 | 2421 | 767 |
ENST00000310858 | TNS1 | chr2 | 218745621 | - | ENST00000367041 | CD46 | chr1 | 207930359 | + | 4347 | 1319 | 118 | 2310 | 730 |
ENST00000310858 | TNS1 | chr2 | 218745621 | - | ENST00000358170 | CD46 | chr1 | 207930359 | + | 4437 | 1319 | 118 | 2400 | 760 |
ENST00000310858 | TNS1 | chr2 | 218745621 | - | ENST00000322918 | CD46 | chr1 | 207930359 | + | 4190 | 1319 | 118 | 2271 | 717 |
ENST00000310858 | TNS1 | chr2 | 218745621 | - | ENST00000361067 | CD46 | chr1 | 207930359 | + | 4302 | 1319 | 118 | 2379 | 753 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000310858 | ENST00000367042 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + | 0.000813622 | 0.99918634 |
ENST00000310858 | ENST00000354848 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + | 0.000830456 | 0.9991696 |
ENST00000310858 | ENST00000441839 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + | 0.000830068 | 0.99916995 |
ENST00000310858 | ENST00000322875 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + | 0.000809046 | 0.999191 |
ENST00000310858 | ENST00000367041 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + | 0.000852814 | 0.9991472 |
ENST00000310858 | ENST00000358170 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + | 0.000854397 | 0.9991456 |
ENST00000310858 | ENST00000322918 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + | 0.000916841 | 0.99908316 |
ENST00000310858 | ENST00000361067 | TNS1 | chr2 | 218745621 | - | CD46 | chr1 | 207930359 | + | 0.000858147 | 0.9991418 |
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Fusion Genomic Features for TNS1-CD46 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
TNS1 | chr2 | 218745620 | - | CD46 | chr1 | 207930358 | + | 0.000128964 | 0.999871 |
TNS1 | chr2 | 218745620 | - | CD46 | chr1 | 207930358 | + | 0.000128964 | 0.999871 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for TNS1-CD46 |
Go to FGviewer for the breakpoints of chr2:218745621-chr1:207930359 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | CD46 |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Acts as a cofactor for complement factor I, a serine protease which protects autologous cells against complement-mediated injury by cleaving C3b and C4b deposited on host tissue. May be involved in the fusion of the spermatozoa with the oocyte during fertilization. Also acts as a costimulatory factor for T-cells which induces the differentiation of CD4+ into T-regulatory 1 cells. T-regulatory 1 cells suppress immune responses by secreting interleukin-10, and therefore are thought to prevent autoimmunity. {ECO:0000269|PubMed:10843656, ECO:0000269|PubMed:12540904}.; FUNCTION: (Microbial infection) A number of viral and bacterial pathogens seem to bind MCP in order to exploit its immune regulation property and directly induce an immunosuppressive phenotype in T-cells.; FUNCTION: (Microbial infection) Acts as a receptor for Adenovirus subgroup B2 and Ad3. {ECO:0000269|PubMed:12915534, ECO:0000269|PubMed:14566335, ECO:0000269|PubMed:15047806, ECO:0000269|PubMed:15078926, ECO:0000269|PubMed:15919905, ECO:0000269|PubMed:16254377}.; FUNCTION: (Microbial infection) Acts as a receptor for cultured Measles virus. {ECO:0000269|PubMed:10972291}.; FUNCTION: (Microbial infection) Acts as a receptor for Herpesvirus 6/HHV-6. {ECO:0000269|PubMed:12663806, ECO:0000269|PubMed:12724329}.; FUNCTION: (Microbial infection) May act as a receptor for pathogenic bacteria Neisseria and Streptococcus pyogenes (PubMed:7708671, PubMed:9379894, PubMed:11260136, PubMed:11971006). |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TNS1 | chr2:218745621 | chr1:207930359 | ENST00000171887 | - | 16 | 33 | 181_307 | 351.3333333333333 | 1736.0 | Domain | C2 tensin-type |
Hgene | TNS1 | chr2:218745621 | chr1:207930359 | ENST00000171887 | - | 16 | 33 | 4_176 | 351.3333333333333 | 1736.0 | Domain | Phosphatase tensin-type |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000322875 | 0 | 13 | 302_326 | 32.333333333333336 | 400.0 | Compositional bias | Note=Ser/Thr-rich | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000322918 | 0 | 10 | 302_326 | 32.333333333333336 | 350.0 | Compositional bias | Note=Ser/Thr-rich | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000354848 | 0 | 12 | 302_326 | 32.333333333333336 | 385.0 | Compositional bias | Note=Ser/Thr-rich | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000357714 | 0 | 11 | 302_326 | 32.333333333333336 | 370.0 | Compositional bias | Note=Ser/Thr-rich | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000358170 | 0 | 14 | 302_326 | 32.333333333333336 | 973.6666666666666 | Compositional bias | Note=Ser/Thr-rich | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000360212 | 0 | 10 | 302_326 | 32.333333333333336 | 356.0 | Compositional bias | Note=Ser/Thr-rich | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000361067 | 0 | 12 | 302_326 | 32.333333333333336 | 386.0 | Compositional bias | Note=Ser/Thr-rich | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367041 | 0 | 12 | 302_326 | 32.333333333333336 | 943.6666666666666 | Compositional bias | Note=Ser/Thr-rich | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367042 | 0 | 13 | 302_326 | 32.333333333333336 | 958.6666666666666 | Compositional bias | Note=Ser/Thr-rich | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367047 | 0 | 12 | 302_326 | 0 | 337.0 | Compositional bias | Note=Ser/Thr-rich | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000441839 | 0 | 11 | 302_326 | 32.333333333333336 | 365.0 | Compositional bias | Note=Ser/Thr-rich | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000480003 | 0 | 11 | 302_326 | 32.333333333333336 | 371.0 | Compositional bias | Note=Ser/Thr-rich | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000322875 | 0 | 13 | 160_225 | 32.333333333333336 | 400.0 | Domain | Sushi 3 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000322875 | 0 | 13 | 226_285 | 32.333333333333336 | 400.0 | Domain | Sushi 4 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000322875 | 0 | 13 | 35_96 | 32.333333333333336 | 400.0 | Domain | Sushi 1 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000322875 | 0 | 13 | 97_159 | 32.333333333333336 | 400.0 | Domain | Sushi 2 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000322918 | 0 | 10 | 160_225 | 32.333333333333336 | 350.0 | Domain | Sushi 3 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000322918 | 0 | 10 | 226_285 | 32.333333333333336 | 350.0 | Domain | Sushi 4 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000322918 | 0 | 10 | 35_96 | 32.333333333333336 | 350.0 | Domain | Sushi 1 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000322918 | 0 | 10 | 97_159 | 32.333333333333336 | 350.0 | Domain | Sushi 2 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000354848 | 0 | 12 | 160_225 | 32.333333333333336 | 385.0 | Domain | Sushi 3 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000354848 | 0 | 12 | 226_285 | 32.333333333333336 | 385.0 | Domain | Sushi 4 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000354848 | 0 | 12 | 35_96 | 32.333333333333336 | 385.0 | Domain | Sushi 1 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000354848 | 0 | 12 | 97_159 | 32.333333333333336 | 385.0 | Domain | Sushi 2 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000357714 | 0 | 11 | 160_225 | 32.333333333333336 | 370.0 | Domain | Sushi 3 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000357714 | 0 | 11 | 226_285 | 32.333333333333336 | 370.0 | Domain | Sushi 4 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000357714 | 0 | 11 | 35_96 | 32.333333333333336 | 370.0 | Domain | Sushi 1 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000357714 | 0 | 11 | 97_159 | 32.333333333333336 | 370.0 | Domain | Sushi 2 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000358170 | 0 | 14 | 160_225 | 32.333333333333336 | 973.6666666666666 | Domain | Sushi 3 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000358170 | 0 | 14 | 226_285 | 32.333333333333336 | 973.6666666666666 | Domain | Sushi 4 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000358170 | 0 | 14 | 35_96 | 32.333333333333336 | 973.6666666666666 | Domain | Sushi 1 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000358170 | 0 | 14 | 97_159 | 32.333333333333336 | 973.6666666666666 | Domain | Sushi 2 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000360212 | 0 | 10 | 160_225 | 32.333333333333336 | 356.0 | Domain | Sushi 3 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000360212 | 0 | 10 | 226_285 | 32.333333333333336 | 356.0 | Domain | Sushi 4 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000360212 | 0 | 10 | 35_96 | 32.333333333333336 | 356.0 | Domain | Sushi 1 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000360212 | 0 | 10 | 97_159 | 32.333333333333336 | 356.0 | Domain | Sushi 2 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000361067 | 0 | 12 | 160_225 | 32.333333333333336 | 386.0 | Domain | Sushi 3 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000361067 | 0 | 12 | 226_285 | 32.333333333333336 | 386.0 | Domain | Sushi 4 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000361067 | 0 | 12 | 35_96 | 32.333333333333336 | 386.0 | Domain | Sushi 1 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000361067 | 0 | 12 | 97_159 | 32.333333333333336 | 386.0 | Domain | Sushi 2 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367041 | 0 | 12 | 160_225 | 32.333333333333336 | 943.6666666666666 | Domain | Sushi 3 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367041 | 0 | 12 | 226_285 | 32.333333333333336 | 943.6666666666666 | Domain | Sushi 4 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367041 | 0 | 12 | 35_96 | 32.333333333333336 | 943.6666666666666 | Domain | Sushi 1 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367041 | 0 | 12 | 97_159 | 32.333333333333336 | 943.6666666666666 | Domain | Sushi 2 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367042 | 0 | 13 | 160_225 | 32.333333333333336 | 958.6666666666666 | Domain | Sushi 3 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367042 | 0 | 13 | 226_285 | 32.333333333333336 | 958.6666666666666 | Domain | Sushi 4 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367042 | 0 | 13 | 35_96 | 32.333333333333336 | 958.6666666666666 | Domain | Sushi 1 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367042 | 0 | 13 | 97_159 | 32.333333333333336 | 958.6666666666666 | Domain | Sushi 2 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367047 | 0 | 12 | 160_225 | 0 | 337.0 | Domain | Sushi 3 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367047 | 0 | 12 | 226_285 | 0 | 337.0 | Domain | Sushi 4 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367047 | 0 | 12 | 35_96 | 0 | 337.0 | Domain | Sushi 1 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367047 | 0 | 12 | 97_159 | 0 | 337.0 | Domain | Sushi 2 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000441839 | 0 | 11 | 160_225 | 32.333333333333336 | 365.0 | Domain | Sushi 3 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000441839 | 0 | 11 | 226_285 | 32.333333333333336 | 365.0 | Domain | Sushi 4 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000441839 | 0 | 11 | 35_96 | 32.333333333333336 | 365.0 | Domain | Sushi 1 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000441839 | 0 | 11 | 97_159 | 32.333333333333336 | 365.0 | Domain | Sushi 2 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000480003 | 0 | 11 | 160_225 | 32.333333333333336 | 371.0 | Domain | Sushi 3 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000480003 | 0 | 11 | 226_285 | 32.333333333333336 | 371.0 | Domain | Sushi 4 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000480003 | 0 | 11 | 35_96 | 32.333333333333336 | 371.0 | Domain | Sushi 1 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000480003 | 0 | 11 | 97_159 | 32.333333333333336 | 371.0 | Domain | Sushi 2 | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000322875 | 0 | 13 | 35_343 | 32.333333333333336 | 400.0 | Topological domain | Extracellular | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000322875 | 0 | 13 | 367_392 | 32.333333333333336 | 400.0 | Topological domain | Cytoplasmic | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000322918 | 0 | 10 | 35_343 | 32.333333333333336 | 350.0 | Topological domain | Extracellular | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000322918 | 0 | 10 | 367_392 | 32.333333333333336 | 350.0 | Topological domain | Cytoplasmic | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000354848 | 0 | 12 | 35_343 | 32.333333333333336 | 385.0 | Topological domain | Extracellular | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000354848 | 0 | 12 | 367_392 | 32.333333333333336 | 385.0 | Topological domain | Cytoplasmic | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000357714 | 0 | 11 | 35_343 | 32.333333333333336 | 370.0 | Topological domain | Extracellular | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000357714 | 0 | 11 | 367_392 | 32.333333333333336 | 370.0 | Topological domain | Cytoplasmic | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000358170 | 0 | 14 | 35_343 | 32.333333333333336 | 973.6666666666666 | Topological domain | Extracellular | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000358170 | 0 | 14 | 367_392 | 32.333333333333336 | 973.6666666666666 | Topological domain | Cytoplasmic | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000360212 | 0 | 10 | 35_343 | 32.333333333333336 | 356.0 | Topological domain | Extracellular | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000360212 | 0 | 10 | 367_392 | 32.333333333333336 | 356.0 | Topological domain | Cytoplasmic | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000361067 | 0 | 12 | 35_343 | 32.333333333333336 | 386.0 | Topological domain | Extracellular | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000361067 | 0 | 12 | 367_392 | 32.333333333333336 | 386.0 | Topological domain | Cytoplasmic | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367041 | 0 | 12 | 35_343 | 32.333333333333336 | 943.6666666666666 | Topological domain | Extracellular | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367041 | 0 | 12 | 367_392 | 32.333333333333336 | 943.6666666666666 | Topological domain | Cytoplasmic | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367042 | 0 | 13 | 35_343 | 32.333333333333336 | 958.6666666666666 | Topological domain | Extracellular | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367042 | 0 | 13 | 367_392 | 32.333333333333336 | 958.6666666666666 | Topological domain | Cytoplasmic | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367047 | 0 | 12 | 35_343 | 0 | 337.0 | Topological domain | Extracellular | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367047 | 0 | 12 | 367_392 | 0 | 337.0 | Topological domain | Cytoplasmic | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000441839 | 0 | 11 | 35_343 | 32.333333333333336 | 365.0 | Topological domain | Extracellular | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000441839 | 0 | 11 | 367_392 | 32.333333333333336 | 365.0 | Topological domain | Cytoplasmic | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000480003 | 0 | 11 | 35_343 | 32.333333333333336 | 371.0 | Topological domain | Extracellular | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000480003 | 0 | 11 | 367_392 | 32.333333333333336 | 371.0 | Topological domain | Cytoplasmic | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000322875 | 0 | 13 | 344_366 | 32.333333333333336 | 400.0 | Transmembrane | Helical | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000322918 | 0 | 10 | 344_366 | 32.333333333333336 | 350.0 | Transmembrane | Helical | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000354848 | 0 | 12 | 344_366 | 32.333333333333336 | 385.0 | Transmembrane | Helical | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000357714 | 0 | 11 | 344_366 | 32.333333333333336 | 370.0 | Transmembrane | Helical | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000358170 | 0 | 14 | 344_366 | 32.333333333333336 | 973.6666666666666 | Transmembrane | Helical | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000360212 | 0 | 10 | 344_366 | 32.333333333333336 | 356.0 | Transmembrane | Helical | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000361067 | 0 | 12 | 344_366 | 32.333333333333336 | 386.0 | Transmembrane | Helical | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367041 | 0 | 12 | 344_366 | 32.333333333333336 | 943.6666666666666 | Transmembrane | Helical | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367042 | 0 | 13 | 344_366 | 32.333333333333336 | 958.6666666666666 | Transmembrane | Helical | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000367047 | 0 | 12 | 344_366 | 0 | 337.0 | Transmembrane | Helical | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000441839 | 0 | 11 | 344_366 | 32.333333333333336 | 365.0 | Transmembrane | Helical | |
Tgene | CD46 | chr2:218745621 | chr1:207930359 | ENST00000480003 | 0 | 11 | 344_366 | 32.333333333333336 | 371.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TNS1 | chr2:218745621 | chr1:207930359 | ENST00000171887 | - | 16 | 33 | 1069_1160 | 351.3333333333333 | 1736.0 | Compositional bias | Note=Ser-rich |
Hgene | TNS1 | chr2:218745621 | chr1:207930359 | ENST00000171887 | - | 16 | 33 | 651_667 | 351.3333333333333 | 1736.0 | Compositional bias | Note=Gln-rich |
Hgene | TNS1 | chr2:218745621 | chr1:207930359 | ENST00000171887 | - | 16 | 33 | 1463_1572 | 351.3333333333333 | 1736.0 | Domain | SH2 |
Top |
Fusion Gene Sequence for TNS1-CD46 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000310858_ENST00000367042_TCGA-BR-8080-01A_TNS1_chr2_218745621_-_CD46_chr1_207930359_length(transcript)=4392nt_BP=1319nt GAGCCACCCAGTAGTGTCTGAGTGGTGATCCACTCTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGAATCTGCAGCAGGAAGG ATGAGGGTTAGATACCAGGAGGAAATTCCTGACAGTGAGAAAAGTAAGACACTCTGTCTGGGAGGCTGTCGAATTTCCTTTCATGGTGCC CTTTCAGCAAAGGAAGGATTGTGTTTTGGAGGGCTCCACCAGGGTCACCCCGAGTGTCCAGCCCCACCTCCAGCCCATCAGAAACATGAG TGTGAGCCGGACCATGGAGGACAGCTGTGAGCTGGACCTGGTGTACGTCACAGAGAGGATCATCGCTGTCTCCTTCCCCAGCACAGCCAA TGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAGGCAACTACCTGCTGTTCAACCTCTCTGA GCGGAGACCTGACATCACGAAGCTCCATGCCAAGGTACTGGAATTTGGCTGGCCCGACCTCCACACCCCAGCCCTGGAGAAGATCTGCAG CATCTGTAAGGCCATGGACACATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCTACACAACAAGGGAAACCGAGGCAGGATAGGAGT TGTCATCGCGGCTTACATGCACTACAGCAACATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATGAGGA TAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCATTACTTCAGTGGCCTGCTCTCCGGCTCCATCAAAATGAACAACAA GCCCTTGTTTCTGCACCACGTGATCATGCACGGCATCCCCAACTTTGAGTCTAAAGGAGGATGTCGGCCATTTCTCCGCATCTACCAGGC CATGCAACCTGTGTACACATCTGGCATCTACAACATCCCAGGAGACAGCCAGACTAGCGTCTGCATCACCATCGAGCCAGGACTGCTCTT GAAGGGAGACATCTTGCTGAAGTGCTACCACAAGAAGTTCCGAAGCCCAGCCCGAGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGC CATCCATGACCTGGGGGTTGTCTTTGGGAAGGAGGACCTTGATGATGCTTTCAAAGATGATCGATTTCCAGAGTATGGCAAAGTGGAGTT TGTATTTTCTTATGGGCCAGAGAAAATTCAAGGCATGGAGCACCTGGAGAACGGGCCGAGCGTGTCTGTGGACTATAACACCTCCGACCC CCTCATCCGCTGGGACTCCTACGACAACTTCAGTGGGCATCGAGATGACGGCATGGAGGATGCCTGTGAGGAGCCACCAACATTTGAAGC TATGGAGCTCATTGGTAAACCAAAACCCTACTATGAGATTGGTGAACGAGTAGATTATAAGTGTAAAAAAGGATACTTCTATATACCTCC TCTTGCCACCCATACTATTTGTGATCGGAATCATACATGGCTACCTGTCTCAGATGACGCCTGTTATAGAGAAACATGTCCATATATACG GGATCCTTTAAATGGCCAAGCAGTCCCTGCAAATGGGACTTACGAGTTTGGTTATCAGATGCACTTTATTTGTAATGAGGGTTATTACTT AATTGGTGAAGAAATTCTATATTGTGAACTTAAAGGATCAGTAGCAATTTGGAGCGGTAAGCCCCCAATATGTGAAAAGGTTTTGTGTAC ACCACCTCCAAAAATAAAAAATGGAAAACACACCTTTAGTGAAGTAGAAGTATTTGAGTATCTTGATGCAGTAACTTATAGTTGTGATCC TGCACCTGGACCAGATCCATTTTCACTTATTGGAGAGAGCACGATTTATTGTGGTGACAATTCAGTGTGGAGTCGTGCTGCTCCAGAGTG TAAAGTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGAAAACAGATATCAGGATTTGGAAAAAAATTTTACTACAAAGCAACAGTTAT GTTTGAATGCGATAAGGGTTTTTACCTCGATGGCAGCGACACAATTGTCTGTGACAGTAACAGTACTTGGGATCCCCCAGTTCCAAAGTG TCTTAAAGTGTCGACTTCTTCCACTACAAAATCTCCAGCGTCCAGTGCCTCAGGTCCTAGGCCTACTTACAAGCCTCCAGTCTCAAATTA TCCAGGATATCCTAAACCTGAGGAAGGAATACTTGACAGTTTGGATGTTTGGGTCATTGCTGTGATTGTTATTGCCATAGTTGTTGGAGT TGCAGTAATTTGTGTTGTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAAAGGCACATACCTAACTGATGAGACCCACAGAGAAGTAAA ATTTACTTCTCTCTGAGAAGGAGAGATGAGAGAAAGGTTTGCTTTTATCATTAAAAGGAAAGCAGATGGTGGAGCTGAATATGCCACTTA CCAGACTAAATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTTCATCTTTTGACTCTATTAAAAT CTTCAATAGTTGTTATTCTGTAGTTTCACTCTCATGAGTGCAACTGTGGCTTAGCTAATATTGCAATGTGGCTTGAATGTAGGTAGCATC CTTTGATGCTTCTTTGAAACTTGTATGAATTTGGGTATGAACAGATTGCCTGCTTTCCCTTAAATAACACTTAGATTTATTGGACCAGTC AGCACAGCATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATTTTATAAAATTGGCAAAATTAGAGAAATATAGTTCACAATGAAATTA TATTTTCTTTGTAAAGAAAGTGGCTTGAAATCTTTTTTGTTCAAAGATTAATGCCAACTCTTAAGATTATTCTTTCACCAACTATAGAAT GTATTTTATATATCGTTCATTGTAAAAAGCCCTTAAAAATATGTGTATACTACTTTGGCTCTTGTGCATAAAAACAAGAACACTGAAAAT TGGGAATATGCACAAACTTGGCTTCTTTAACCAAGAATATTATTGGAAAATTCTCTAAAAGTTAATAGGGTAAATTCTCTATTTTTTGTA ATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTTCACTTTTTAAAACATCCCTAACTGATCGAATATATCAG TAATTTCAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACA CTGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTC TCCCTCCTTAAATAAAGAGAGGGGTTAAACATGCCCTCTAAAAGTAGGTGGTTTTGAAGAGAATAAATTCATCAGATAACCTCAAGTCAC ATGAGAATCTTAGTCCATTTACATTGCCTTGGCTAGTAAAAGCCATCTATGTATATGTCTTACCTCATCTCCTAAAAGGCAGAGTACAAA GTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCTATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTA GCACTTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGA CTGCCACTGCATTTCATATCACACTGTTAAAAGTTGTGTTTTGAAATTTTATGTTTAGTTGCACAAATTGGGCCAAAGAAACATTGCCTT GAGGAAGATATGATTGGAAAATCAAGAGTGTAGAAGAATAAATACTGTTTTACTGTCCAAAGACATGTTTATAGTGCTCTGTAAATGTTC CTTTCCTTTGTAGTCTCTGGCAAGATGCTTTAGGAAGATAAAAGTTTGAGGAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAG TTTATACCCGTTTCACATGCTTTTCAAGAATGTCGCAATTACTAAGAAGCAGATAATGGTGTTTTTTAGAAACCTAATTGAAGTATATTC AACCAAATACTTTAATGTATAAAATAAATATTATACAATATACTTGTATAGCAGTTTCTGCTTCACATTTGATTTTTTCAAATTTAATAT TTATATTAGAGATCTATATATGTATAAATATGTATTTTGTCAAATTTGTTACTTAAATATATAGAGACCAGTTTTCTCTGGAAGTTTGTT TAAATGACAGAAGCGTATATGAATTCAAGAAAATTTAAGCTGCAAAAATGTATTTGCTATAAAATGAGAAGTCTCACTGATAGAGGTTCT >In-frame_ENST00000310858_ENST00000367042_TCGA-BR-8080-01A_TNS1_chr2_218745621_-_CD46_chr1_207930359_length(amino acids)=745AA_start in transcript=118_stop in transcript=2355 MTVRKVRHSVWEAVEFPFMVPFQQRKDCVLEGSTRVTPSVQPHLQPIRNMSVSRTMEDSCELDLVYVTERIIAVSFPSTANEENFRSNLR EVAQMLKSKHGGNYLLFNLSERRPDITKLHAKVLEFGWPDLHTPALEKICSICKAMDTWLNADPHNVVVLHNKGNRGRIGVVIAAYMHYS NISASADQALDRFAMKRFYEDKIVPIGQPSQRRYVHYFSGLLSGSIKMNNKPLFLHHVIMHGIPNFESKGGCRPFLRIYQAMQPVYTSGI YNIPGDSQTSVCITIEPGLLLKGDILLKCYHKKFRSPARDVIFRVQFHTCAIHDLGVVFGKEDLDDAFKDDRFPEYGKVEFVFSYGPEKI QGMEHLENGPSVSVDYNTSDPLIRWDSYDNFSGHRDDGMEDACEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDR NHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGK HTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQISGFGKKFYYKATVMFECDKGFYL DGSDTIVCDSNSTWDPPVPKCLKVSTSSTTKSPASSASGPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYR -------------------------------------------------------------- >In-frame_ENST00000310858_ENST00000354848_TCGA-BR-8080-01A_TNS1_chr2_218745621_-_CD46_chr1_207930359_length(transcript)=4299nt_BP=1319nt GAGCCACCCAGTAGTGTCTGAGTGGTGATCCACTCTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGAATCTGCAGCAGGAAGG ATGAGGGTTAGATACCAGGAGGAAATTCCTGACAGTGAGAAAAGTAAGACACTCTGTCTGGGAGGCTGTCGAATTTCCTTTCATGGTGCC CTTTCAGCAAAGGAAGGATTGTGTTTTGGAGGGCTCCACCAGGGTCACCCCGAGTGTCCAGCCCCACCTCCAGCCCATCAGAAACATGAG TGTGAGCCGGACCATGGAGGACAGCTGTGAGCTGGACCTGGTGTACGTCACAGAGAGGATCATCGCTGTCTCCTTCCCCAGCACAGCCAA TGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAGGCAACTACCTGCTGTTCAACCTCTCTGA GCGGAGACCTGACATCACGAAGCTCCATGCCAAGGTACTGGAATTTGGCTGGCCCGACCTCCACACCCCAGCCCTGGAGAAGATCTGCAG CATCTGTAAGGCCATGGACACATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCTACACAACAAGGGAAACCGAGGCAGGATAGGAGT TGTCATCGCGGCTTACATGCACTACAGCAACATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATGAGGA TAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCATTACTTCAGTGGCCTGCTCTCCGGCTCCATCAAAATGAACAACAA GCCCTTGTTTCTGCACCACGTGATCATGCACGGCATCCCCAACTTTGAGTCTAAAGGAGGATGTCGGCCATTTCTCCGCATCTACCAGGC CATGCAACCTGTGTACACATCTGGCATCTACAACATCCCAGGAGACAGCCAGACTAGCGTCTGCATCACCATCGAGCCAGGACTGCTCTT GAAGGGAGACATCTTGCTGAAGTGCTACCACAAGAAGTTCCGAAGCCCAGCCCGAGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGC CATCCATGACCTGGGGGTTGTCTTTGGGAAGGAGGACCTTGATGATGCTTTCAAAGATGATCGATTTCCAGAGTATGGCAAAGTGGAGTT TGTATTTTCTTATGGGCCAGAGAAAATTCAAGGCATGGAGCACCTGGAGAACGGGCCGAGCGTGTCTGTGGACTATAACACCTCCGACCC CCTCATCCGCTGGGACTCCTACGACAACTTCAGTGGGCATCGAGATGACGGCATGGAGGATGCCTGTGAGGAGCCACCAACATTTGAAGC TATGGAGCTCATTGGTAAACCAAAACCCTACTATGAGATTGGTGAACGAGTAGATTATAAGTGTAAAAAAGGATACTTCTATATACCTCC TCTTGCCACCCATACTATTTGTGATCGGAATCATACATGGCTACCTGTCTCAGATGACGCCTGTTATAGAGAAACATGTCCATATATACG GGATCCTTTAAATGGCCAAGCAGTCCCTGCAAATGGGACTTACGAGTTTGGTTATCAGATGCACTTTATTTGTAATGAGGGTTATTACTT AATTGGTGAAGAAATTCTATATTGTGAACTTAAAGGATCAGTAGCAATTTGGAGCGGTAAGCCCCCAATATGTGAAAAGGTTTTGTGTAC ACCACCTCCAAAAATAAAAAATGGAAAACACACCTTTAGTGAAGTAGAAGTATTTGAGTATCTTGATGCAGTAACTTATAGTTGTGATCC TGCACCTGGACCAGATCCATTTTCACTTATTGGAGAGAGCACGATTTATTGTGGTGACAATTCAGTGTGGAGTCGTGCTGCTCCAGAGTG TAAAGTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGAAAACAGATATCAGGATTTGGAAAAAAATTTTACTACAAAGCAACAGTTAT GTTTGAATGCGATAAGGGTTTTTACCTCGATGGCAGCGACACAATTGTCTGTGACAGTAACAGTACTTGGGATCCCCCAGTTCCAAAGTG TCTTAAAGTGTCGACTTCTTCCACTACAAAATCTCCAGCGTCCAGTGCCTCAGGTCCTAGGCCTACTTACAAGCCTCCAGTCTCAAATTA TCCAGGATATCCTAAACCTGAGGAAGGAATACTTGACAGTTTGGATGTTTGGGTCATTGCTGTGATTGTTATTGCCATAGTTGTTGGAGT TGCAGTAATTTGTGTTGTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAAAGGGAAAGCAGATGGTGGAGCTGAATATGCCACTTACCA GACTAAATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTTCATCTTTTGACTCTATTAAAATCTT CAATAGTTGTTATTCTGTAGTTTCACTCTCATGAGTGCAACTGTGGCTTAGCTAATATTGCAATGTGGCTTGAATGTAGGTAGCATCCTT TGATGCTTCTTTGAAACTTGTATGAATTTGGGTATGAACAGATTGCCTGCTTTCCCTTAAATAACACTTAGATTTATTGGACCAGTCAGC ACAGCATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATTTTATAAAATTGGCAAAATTAGAGAAATATAGTTCACAATGAAATTATAT TTTCTTTGTAAAGAAAGTGGCTTGAAATCTTTTTTGTTCAAAGATTAATGCCAACTCTTAAGATTATTCTTTCACCAACTATAGAATGTA TTTTATATATCGTTCATTGTAAAAAGCCCTTAAAAATATGTGTATACTACTTTGGCTCTTGTGCATAAAAACAAGAACACTGAAAATTGG GAATATGCACAAACTTGGCTTCTTTAACCAAGAATATTATTGGAAAATTCTCTAAAAGTTAATAGGGTAAATTCTCTATTTTTTGTAATG TGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTTCACTTTTTAAAACATCCCTAACTGATCGAATATATCAGTAA TTTCAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTG TAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCC CTCCTTAAATAAAGAGAGGGGTTAAACATGCCCTCTAAAAGTAGGTGGTTTTGAAGAGAATAAATTCATCAGATAACCTCAAGTCACATG AGAATCTTAGTCCATTTACATTGCCTTGGCTAGTAAAAGCCATCTATGTATATGTCTTACCTCATCTCCTAAAAGGCAGAGTACAAAGTA AGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCTATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCA CTTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTG CCACTGCATTTCATATCACACTGTTAAAAGTTGTGTTTTGAAATTTTATGTTTAGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAG GAAGATATGATTGGAAAATCAAGAGTGTAGAAGAATAAATACTGTTTTACTGTCCAAAGACATGTTTATAGTGCTCTGTAAATGTTCCTT TCCTTTGTAGTCTCTGGCAAGATGCTTTAGGAAGATAAAAGTTTGAGGAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTT ATACCCGTTTCACATGCTTTTCAAGAATGTCGCAATTACTAAGAAGCAGATAATGGTGTTTTTTAGAAACCTAATTGAAGTATATTCAAC CAAATACTTTAATGTATAAAATAAATATTATACAATATACTTGTATAGCAGTTTCTGCTTCACATTTGATTTTTTCAAATTTAATATTTA TATTAGAGATCTATATATGTATAAATATGTATTTTGTCAAATTTGTTACTTAAATATATAGAGACCAGTTTTCTCTGGAAGTTTGTTTAA ATGACAGAAGCGTATATGAATTCAAGAAAATTTAAGCTGCAAAAATGTATTTGCTATAAAATGAGAAGTCTCACTGATAGAGGTTCTTTA >In-frame_ENST00000310858_ENST00000354848_TCGA-BR-8080-01A_TNS1_chr2_218745621_-_CD46_chr1_207930359_length(amino acids)=752AA_start in transcript=118_stop in transcript=2376 MTVRKVRHSVWEAVEFPFMVPFQQRKDCVLEGSTRVTPSVQPHLQPIRNMSVSRTMEDSCELDLVYVTERIIAVSFPSTANEENFRSNLR EVAQMLKSKHGGNYLLFNLSERRPDITKLHAKVLEFGWPDLHTPALEKICSICKAMDTWLNADPHNVVVLHNKGNRGRIGVVIAAYMHYS NISASADQALDRFAMKRFYEDKIVPIGQPSQRRYVHYFSGLLSGSIKMNNKPLFLHHVIMHGIPNFESKGGCRPFLRIYQAMQPVYTSGI YNIPGDSQTSVCITIEPGLLLKGDILLKCYHKKFRSPARDVIFRVQFHTCAIHDLGVVFGKEDLDDAFKDDRFPEYGKVEFVFSYGPEKI QGMEHLENGPSVSVDYNTSDPLIRWDSYDNFSGHRDDGMEDACEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDR NHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGK HTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQISGFGKKFYYKATVMFECDKGFYL DGSDTIVCDSNSTWDPPVPKCLKVSTSSTTKSPASSASGPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYR -------------------------------------------------------------- >In-frame_ENST00000310858_ENST00000441839_TCGA-BR-8080-01A_TNS1_chr2_218745621_-_CD46_chr1_207930359_length(transcript)=4235nt_BP=1319nt GAGCCACCCAGTAGTGTCTGAGTGGTGATCCACTCTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGAATCTGCAGCAGGAAGG ATGAGGGTTAGATACCAGGAGGAAATTCCTGACAGTGAGAAAAGTAAGACACTCTGTCTGGGAGGCTGTCGAATTTCCTTTCATGGTGCC CTTTCAGCAAAGGAAGGATTGTGTTTTGGAGGGCTCCACCAGGGTCACCCCGAGTGTCCAGCCCCACCTCCAGCCCATCAGAAACATGAG TGTGAGCCGGACCATGGAGGACAGCTGTGAGCTGGACCTGGTGTACGTCACAGAGAGGATCATCGCTGTCTCCTTCCCCAGCACAGCCAA TGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAGGCAACTACCTGCTGTTCAACCTCTCTGA GCGGAGACCTGACATCACGAAGCTCCATGCCAAGGTACTGGAATTTGGCTGGCCCGACCTCCACACCCCAGCCCTGGAGAAGATCTGCAG CATCTGTAAGGCCATGGACACATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCTACACAACAAGGGAAACCGAGGCAGGATAGGAGT TGTCATCGCGGCTTACATGCACTACAGCAACATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATGAGGA TAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCATTACTTCAGTGGCCTGCTCTCCGGCTCCATCAAAATGAACAACAA GCCCTTGTTTCTGCACCACGTGATCATGCACGGCATCCCCAACTTTGAGTCTAAAGGAGGATGTCGGCCATTTCTCCGCATCTACCAGGC CATGCAACCTGTGTACACATCTGGCATCTACAACATCCCAGGAGACAGCCAGACTAGCGTCTGCATCACCATCGAGCCAGGACTGCTCTT GAAGGGAGACATCTTGCTGAAGTGCTACCACAAGAAGTTCCGAAGCCCAGCCCGAGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGC CATCCATGACCTGGGGGTTGTCTTTGGGAAGGAGGACCTTGATGATGCTTTCAAAGATGATCGATTTCCAGAGTATGGCAAAGTGGAGTT TGTATTTTCTTATGGGCCAGAGAAAATTCAAGGCATGGAGCACCTGGAGAACGGGCCGAGCGTGTCTGTGGACTATAACACCTCCGACCC CCTCATCCGCTGGGACTCCTACGACAACTTCAGTGGGCATCGAGATGACGGCATGGAGGATGCCTGTGAGGAGCCACCAACATTTGAAGC TATGGAGCTCATTGGTAAACCAAAACCCTACTATGAGATTGGTGAACGAGTAGATTATAAGTGTAAAAAAGGATACTTCTATATACCTCC TCTTGCCACCCATACTATTTGTGATCGGAATCATACATGGCTACCTGTCTCAGATGACGCCTGTTATAGAGAAACATGTCCATATATACG GGATCCTTTAAATGGCCAAGCAGTCCCTGCAAATGGGACTTACGAGTTTGGTTATCAGATGCACTTTATTTGTAATGAGGGTTATTACTT AATTGGTGAAGAAATTCTATATTGTGAACTTAAAGGATCAGTAGCAATTTGGAGCGGTAAGCCCCCAATATGTGAAAAGGTTTTGTGTAC ACCACCTCCAAAAATAAAAAATGGAAAACACACCTTTAGTGAAGTAGAAGTATTTGAGTATCTTGATGCAGTAACTTATAGTTGTGATCC TGCACCTGGACCAGATCCATTTTCACTTATTGGAGAGAGCACGATTTATTGTGGTGACAATTCAGTGTGGAGTCGTGCTGCTCCAGAGTG TAAAGTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGAAAACAGATATCAGGATTTGGAAAAAAATTTTACTACAAAGCAACAGTTAT GTTTGAATGCGATAAGGGTTTTTACCTCGATGGCAGCGACACAATTGTCTGTGACAGTAACAGTACTTGGGATCCCCCAGTTCCAAAGTG TCTTAAAGTGTCGACTTCTTCCACTACAAAATCTCCAGCGTCCAGTGCCTCAGGTCCTAGGCCTACTTACAAGCCTCCAGTCTCAAATTA TCCAGGATATCCTAAACCTGAGGAAGGAATACTTGACAGTTTGGATGTTTGGGTCATTGCTGTGATTGTTATTGCCATAGGAAAGCAGAT GGTGGAGCTGAATATGCCACTTACCAGACTAAATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGT TCATCTTTTGACTCTATTAAAATCTTCAATAGTTGTTATTCTGTAGTTTCACTCTCATGAGTGCAACTGTGGCTTAGCTAATATTGCAAT GTGGCTTGAATGTAGGTAGCATCCTTTGATGCTTCTTTGAAACTTGTATGAATTTGGGTATGAACAGATTGCCTGCTTTCCCTTAAATAA CACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATTTTATAAAATTGGCAAAATTAGAG AAATATAGTTCACAATGAAATTATATTTTCTTTGTAAAGAAAGTGGCTTGAAATCTTTTTTGTTCAAAGATTAATGCCAACTCTTAAGAT TATTCTTTCACCAACTATAGAATGTATTTTATATATCGTTCATTGTAAAAAGCCCTTAAAAATATGTGTATACTACTTTGGCTCTTGTGC ATAAAAACAAGAACACTGAAAATTGGGAATATGCACAAACTTGGCTTCTTTAACCAAGAATATTATTGGAAAATTCTCTAAAAGTTAATA GGGTAAATTCTCTATTTTTTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTTCACTTTTTAAAACAT CCCTAACTGATCGAATATATCAGTAATTTCAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACAGGAGTGC CACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTCTGAA TTCTGGTTACATGTGTTTTTCTCTCCCTCCTTAAATAAAGAGAGGGGTTAAACATGCCCTCTAAAAGTAGGTGGTTTTGAAGAGAATAAA TTCATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCTAGTAAAAGCCATCTATGTATATGTCTTACCTCA TCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCTATTTGCTGTTGATTGTACCAAGGGATGG AAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGA AGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCATATCACACTGTTAAAAGTTGTGTTTTGAAATTTTATGTTTAGTTGCACAAA TTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAAATCAAGAGTGTAGAAGAATAAATACTGTTTTACTGTCCAAAGACATG TTTATAGTGCTCTGTAAATGTTCCTTTCCTTTGTAGTCTCTGGCAAGATGCTTTAGGAAGATAAAAGTTTGAGGAGAACAAACAGGAATT CTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTTTCAAGAATGTCGCAATTACTAAGAAGCAGATAATGGTGTTTTTT AGAAACCTAATTGAAGTATATTCAACCAAATACTTTAATGTATAAAATAAATATTATACAATATACTTGTATAGCAGTTTCTGCTTCACA TTTGATTTTTTCAAATTTAATATTTATATTAGAGATCTATATATGTATAAATATGTATTTTGTCAAATTTGTTACTTAAATATATAGAGA CCAGTTTTCTCTGGAAGTTTGTTTAAATGACAGAAGCGTATATGAATTCAAGAAAATTTAAGCTGCAAAAATGTATTTGCTATAAAATGA GAAGTCTCACTGATAGAGGTTCTTTATTGCTCATTTTTTAAAAAATGGACTCTTGAAATCTGTTAAAATAAAATTGTACATTTGGAGATG >In-frame_ENST00000310858_ENST00000441839_TCGA-BR-8080-01A_TNS1_chr2_218745621_-_CD46_chr1_207930359_length(amino acids)=732AA_start in transcript=118_stop in transcript=2316 MTVRKVRHSVWEAVEFPFMVPFQQRKDCVLEGSTRVTPSVQPHLQPIRNMSVSRTMEDSCELDLVYVTERIIAVSFPSTANEENFRSNLR EVAQMLKSKHGGNYLLFNLSERRPDITKLHAKVLEFGWPDLHTPALEKICSICKAMDTWLNADPHNVVVLHNKGNRGRIGVVIAAYMHYS NISASADQALDRFAMKRFYEDKIVPIGQPSQRRYVHYFSGLLSGSIKMNNKPLFLHHVIMHGIPNFESKGGCRPFLRIYQAMQPVYTSGI YNIPGDSQTSVCITIEPGLLLKGDILLKCYHKKFRSPARDVIFRVQFHTCAIHDLGVVFGKEDLDDAFKDDRFPEYGKVEFVFSYGPEKI QGMEHLENGPSVSVDYNTSDPLIRWDSYDNFSGHRDDGMEDACEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDR NHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGK HTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQISGFGKKFYYKATVMFECDKGFYL DGSDTIVCDSNSTWDPPVPKCLKVSTSSTTKSPASSASGPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIGKQMVELNMPLTR -------------------------------------------------------------- >In-frame_ENST00000310858_ENST00000322875_TCGA-BR-8080-01A_TNS1_chr2_218745621_-_CD46_chr1_207930359_length(transcript)=4344nt_BP=1319nt GAGCCACCCAGTAGTGTCTGAGTGGTGATCCACTCTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGAATCTGCAGCAGGAAGG ATGAGGGTTAGATACCAGGAGGAAATTCCTGACAGTGAGAAAAGTAAGACACTCTGTCTGGGAGGCTGTCGAATTTCCTTTCATGGTGCC CTTTCAGCAAAGGAAGGATTGTGTTTTGGAGGGCTCCACCAGGGTCACCCCGAGTGTCCAGCCCCACCTCCAGCCCATCAGAAACATGAG TGTGAGCCGGACCATGGAGGACAGCTGTGAGCTGGACCTGGTGTACGTCACAGAGAGGATCATCGCTGTCTCCTTCCCCAGCACAGCCAA TGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAGGCAACTACCTGCTGTTCAACCTCTCTGA GCGGAGACCTGACATCACGAAGCTCCATGCCAAGGTACTGGAATTTGGCTGGCCCGACCTCCACACCCCAGCCCTGGAGAAGATCTGCAG CATCTGTAAGGCCATGGACACATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCTACACAACAAGGGAAACCGAGGCAGGATAGGAGT TGTCATCGCGGCTTACATGCACTACAGCAACATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATGAGGA TAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCATTACTTCAGTGGCCTGCTCTCCGGCTCCATCAAAATGAACAACAA GCCCTTGTTTCTGCACCACGTGATCATGCACGGCATCCCCAACTTTGAGTCTAAAGGAGGATGTCGGCCATTTCTCCGCATCTACCAGGC CATGCAACCTGTGTACACATCTGGCATCTACAACATCCCAGGAGACAGCCAGACTAGCGTCTGCATCACCATCGAGCCAGGACTGCTCTT GAAGGGAGACATCTTGCTGAAGTGCTACCACAAGAAGTTCCGAAGCCCAGCCCGAGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGC CATCCATGACCTGGGGGTTGTCTTTGGGAAGGAGGACCTTGATGATGCTTTCAAAGATGATCGATTTCCAGAGTATGGCAAAGTGGAGTT TGTATTTTCTTATGGGCCAGAGAAAATTCAAGGCATGGAGCACCTGGAGAACGGGCCGAGCGTGTCTGTGGACTATAACACCTCCGACCC CCTCATCCGCTGGGACTCCTACGACAACTTCAGTGGGCATCGAGATGACGGCATGGAGGATGCCTGTGAGGAGCCACCAACATTTGAAGC TATGGAGCTCATTGGTAAACCAAAACCCTACTATGAGATTGGTGAACGAGTAGATTATAAGTGTAAAAAAGGATACTTCTATATACCTCC TCTTGCCACCCATACTATTTGTGATCGGAATCATACATGGCTACCTGTCTCAGATGACGCCTGTTATAGAGAAACATGTCCATATATACG GGATCCTTTAAATGGCCAAGCAGTCCCTGCAAATGGGACTTACGAGTTTGGTTATCAGATGCACTTTATTTGTAATGAGGGTTATTACTT AATTGGTGAAGAAATTCTATATTGTGAACTTAAAGGATCAGTAGCAATTTGGAGCGGTAAGCCCCCAATATGTGAAAAGGTTTTGTGTAC ACCACCTCCAAAAATAAAAAATGGAAAACACACCTTTAGTGAAGTAGAAGTATTTGAGTATCTTGATGCAGTAACTTATAGTTGTGATCC TGCACCTGGACCAGATCCATTTTCACTTATTGGAGAGAGCACGATTTATTGTGGTGACAATTCAGTGTGGAGTCGTGCTGCTCCAGAGTG TAAAGTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGAAAACAGATATCAGGATTTGGAAAAAAATTTTACTACAAAGCAACAGTTAT GTTTGAATGCGATAAGGGTTTTTACCTCGATGGCAGCGACACAATTGTCTGTGACAGTAACAGTACTTGGGATCCCCCAGTTCCAAAGTG TCTTAAAGTGCTGCCTCCATCTAGTACAAAACCTCCAGCTTTGAGTCATTCAGTGTCGACTTCTTCCACTACAAAATCTCCAGCGTCCAG TGCCTCAGGTCCTAGGCCTACTTACAAGCCTCCAGTCTCAAATTATCCAGGATATCCTAAACCTGAGGAAGGAATACTTGACAGTTTGGA TGTTTGGGTCATTGCTGTGATTGTTATTGCCATAGTTGTTGGAGTTGCAGTAATTTGTGTTGTCCCGTACAGATATCTTCAAAGGAGGAA GAAGAAAGGGAAAGCAGATGGTGGAGCTGAATATGCCACTTACCAGACTAAATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGATTC CACAACCTGGTTTGCCAGTTCATCTTTTGACTCTATTAAAATCTTCAATAGTTGTTATTCTGTAGTTTCACTCTCATGAGTGCAACTGTG GCTTAGCTAATATTGCAATGTGGCTTGAATGTAGGTAGCATCCTTTGATGCTTCTTTGAAACTTGTATGAATTTGGGTATGAACAGATTG CCTGCTTTCCCTTAAATAACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATTTTAT AAAATTGGCAAAATTAGAGAAATATAGTTCACAATGAAATTATATTTTCTTTGTAAAGAAAGTGGCTTGAAATCTTTTTTGTTCAAAGAT TAATGCCAACTCTTAAGATTATTCTTTCACCAACTATAGAATGTATTTTATATATCGTTCATTGTAAAAAGCCCTTAAAAATATGTGTAT ACTACTTTGGCTCTTGTGCATAAAAACAAGAACACTGAAAATTGGGAATATGCACAAACTTGGCTTCTTTAACCAAGAATATTATTGGAA AATTCTCTAAAAGTTAATAGGGTAAATTCTCTATTTTTTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTG TTTTCACTTTTTAAAACATCCCTAACTGATCGAATATATCAGTAATTTCAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTG ACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGG TTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCCCTCCTTAAATAAAGAGAGGGGTTAAACATGCCCTCTAAAAGTAGG TGGTTTTGAAGAGAATAAATTCATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCTAGTAAAAGCCATCT ATGTATATGTCTTACCTCATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCTATTTGCTGT TGATTGTACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTCCCTTAGCC AAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCATATCACACTGTTAAAAGTTGTGTTTTGAAATT TTATGTTTAGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAAATCAAGAGTGTAGAAGAATAAATACTGT TTTACTGTCCAAAGACATGTTTATAGTGCTCTGTAAATGTTCCTTTCCTTTGTAGTCTCTGGCAAGATGCTTTAGGAAGATAAAAGTTTG AGGAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTTTCAAGAATGTCGCAATTACTAAGAA GCAGATAATGGTGTTTTTTAGAAACCTAATTGAAGTATATTCAACCAAATACTTTAATGTATAAAATAAATATTATACAATATACTTGTA TAGCAGTTTCTGCTTCACATTTGATTTTTTCAAATTTAATATTTATATTAGAGATCTATATATGTATAAATATGTATTTTGTCAAATTTG TTACTTAAATATATAGAGACCAGTTTTCTCTGGAAGTTTGTTTAAATGACAGAAGCGTATATGAATTCAAGAAAATTTAAGCTGCAAAAA TGTATTTGCTATAAAATGAGAAGTCTCACTGATAGAGGTTCTTTATTGCTCATTTTTTAAAAAATGGACTCTTGAAATCTGTTAAAATAA >In-frame_ENST00000310858_ENST00000322875_TCGA-BR-8080-01A_TNS1_chr2_218745621_-_CD46_chr1_207930359_length(amino acids)=767AA_start in transcript=118_stop in transcript=2421 MTVRKVRHSVWEAVEFPFMVPFQQRKDCVLEGSTRVTPSVQPHLQPIRNMSVSRTMEDSCELDLVYVTERIIAVSFPSTANEENFRSNLR EVAQMLKSKHGGNYLLFNLSERRPDITKLHAKVLEFGWPDLHTPALEKICSICKAMDTWLNADPHNVVVLHNKGNRGRIGVVIAAYMHYS NISASADQALDRFAMKRFYEDKIVPIGQPSQRRYVHYFSGLLSGSIKMNNKPLFLHHVIMHGIPNFESKGGCRPFLRIYQAMQPVYTSGI YNIPGDSQTSVCITIEPGLLLKGDILLKCYHKKFRSPARDVIFRVQFHTCAIHDLGVVFGKEDLDDAFKDDRFPEYGKVEFVFSYGPEKI QGMEHLENGPSVSVDYNTSDPLIRWDSYDNFSGHRDDGMEDACEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDR NHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGK HTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQISGFGKKFYYKATVMFECDKGFYL DGSDTIVCDSNSTWDPPVPKCLKVLPPSSTKPPALSHSVSTSSTTKSPASSASGPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVI -------------------------------------------------------------- >In-frame_ENST00000310858_ENST00000367041_TCGA-BR-8080-01A_TNS1_chr2_218745621_-_CD46_chr1_207930359_length(transcript)=4347nt_BP=1319nt GAGCCACCCAGTAGTGTCTGAGTGGTGATCCACTCTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGAATCTGCAGCAGGAAGG ATGAGGGTTAGATACCAGGAGGAAATTCCTGACAGTGAGAAAAGTAAGACACTCTGTCTGGGAGGCTGTCGAATTTCCTTTCATGGTGCC CTTTCAGCAAAGGAAGGATTGTGTTTTGGAGGGCTCCACCAGGGTCACCCCGAGTGTCCAGCCCCACCTCCAGCCCATCAGAAACATGAG TGTGAGCCGGACCATGGAGGACAGCTGTGAGCTGGACCTGGTGTACGTCACAGAGAGGATCATCGCTGTCTCCTTCCCCAGCACAGCCAA TGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAGGCAACTACCTGCTGTTCAACCTCTCTGA GCGGAGACCTGACATCACGAAGCTCCATGCCAAGGTACTGGAATTTGGCTGGCCCGACCTCCACACCCCAGCCCTGGAGAAGATCTGCAG CATCTGTAAGGCCATGGACACATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCTACACAACAAGGGAAACCGAGGCAGGATAGGAGT TGTCATCGCGGCTTACATGCACTACAGCAACATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATGAGGA TAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCATTACTTCAGTGGCCTGCTCTCCGGCTCCATCAAAATGAACAACAA GCCCTTGTTTCTGCACCACGTGATCATGCACGGCATCCCCAACTTTGAGTCTAAAGGAGGATGTCGGCCATTTCTCCGCATCTACCAGGC CATGCAACCTGTGTACACATCTGGCATCTACAACATCCCAGGAGACAGCCAGACTAGCGTCTGCATCACCATCGAGCCAGGACTGCTCTT GAAGGGAGACATCTTGCTGAAGTGCTACCACAAGAAGTTCCGAAGCCCAGCCCGAGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGC CATCCATGACCTGGGGGTTGTCTTTGGGAAGGAGGACCTTGATGATGCTTTCAAAGATGATCGATTTCCAGAGTATGGCAAAGTGGAGTT TGTATTTTCTTATGGGCCAGAGAAAATTCAAGGCATGGAGCACCTGGAGAACGGGCCGAGCGTGTCTGTGGACTATAACACCTCCGACCC CCTCATCCGCTGGGACTCCTACGACAACTTCAGTGGGCATCGAGATGACGGCATGGAGGATGCCTGTGAGGAGCCACCAACATTTGAAGC TATGGAGCTCATTGGTAAACCAAAACCCTACTATGAGATTGGTGAACGAGTAGATTATAAGTGTAAAAAAGGATACTTCTATATACCTCC TCTTGCCACCCATACTATTTGTGATCGGAATCATACATGGCTACCTGTCTCAGATGACGCCTGTTATAGAGAAACATGTCCATATATACG GGATCCTTTAAATGGCCAAGCAGTCCCTGCAAATGGGACTTACGAGTTTGGTTATCAGATGCACTTTATTTGTAATGAGGGTTATTACTT AATTGGTGAAGAAATTCTATATTGTGAACTTAAAGGATCAGTAGCAATTTGGAGCGGTAAGCCCCCAATATGTGAAAAGGTTTTGTGTAC ACCACCTCCAAAAATAAAAAATGGAAAACACACCTTTAGTGAAGTAGAAGTATTTGAGTATCTTGATGCAGTAACTTATAGTTGTGATCC TGCACCTGGACCAGATCCATTTTCACTTATTGGAGAGAGCACGATTTATTGTGGTGACAATTCAGTGTGGAGTCGTGCTGCTCCAGAGTG TAAAGTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGAAAACAGATATCAGGATTTGGAAAAAAATTTTACTACAAAGCAACAGTTAT GTTTGAATGCGATAAGGGTTTTTACCTCGATGGCAGCGACACAATTGTCTGTGACAGTAACAGTACTTGGGATCCCCCAGTTCCAAAGTG TCTTAAAGGTCCTAGGCCTACTTACAAGCCTCCAGTCTCAAATTATCCAGGATATCCTAAACCTGAGGAAGGAATACTTGACAGTTTGGA TGTTTGGGTCATTGCTGTGATTGTTATTGCCATAGTTGTTGGAGTTGCAGTAATTTGTGTTGTCCCGTACAGATATCTTCAAAGGAGGAA GAAGAAAGGCACATACCTAACTGATGAGACCCACAGAGAAGTAAAATTTACTTCTCTCTGAGAAGGAGAGATGAGAGAAAGGTTTGCTTT TATCATTAAAAGGAAAGCAGATGGTGGAGCTGAATATGCCACTTACCAGACTAAATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGA TTCCACAACCTGGTTTGCCAGTTCATCTTTTGACTCTATTAAAATCTTCAATAGTTGTTATTCTGTAGTTTCACTCTCATGAGTGCAACT GTGGCTTAGCTAATATTGCAATGTGGCTTGAATGTAGGTAGCATCCTTTGATGCTTCTTTGAAACTTGTATGAATTTGGGTATGAACAGA TTGCCTGCTTTCCCTTAAATAACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATTT TATAAAATTGGCAAAATTAGAGAAATATAGTTCACAATGAAATTATATTTTCTTTGTAAAGAAAGTGGCTTGAAATCTTTTTTGTTCAAA GATTAATGCCAACTCTTAAGATTATTCTTTCACCAACTATAGAATGTATTTTATATATCGTTCATTGTAAAAAGCCCTTAAAAATATGTG TATACTACTTTGGCTCTTGTGCATAAAAACAAGAACACTGAAAATTGGGAATATGCACAAACTTGGCTTCTTTAACCAAGAATATTATTG GAAAATTCTCTAAAAGTTAATAGGGTAAATTCTCTATTTTTTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCAT TTGTTTTCACTTTTTAAAACATCCCTAACTGATCGAATATATCAGTAATTTCAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACT CTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTT AGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCCCTCCTTAAATAAAGAGAGGGGTTAAACATGCCCTCTAAAAGT AGGTGGTTTTGAAGAGAATAAATTCATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCTAGTAAAAGCCA TCTATGTATATGTCTTACCTCATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCTATTTGC TGTTGATTGTACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTCCCTTA GCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCATATCACACTGTTAAAAGTTGTGTTTTGAA ATTTTATGTTTAGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAAATCAAGAGTGTAGAAGAATAAATAC TGTTTTACTGTCCAAAGACATGTTTATAGTGCTCTGTAAATGTTCCTTTCCTTTGTAGTCTCTGGCAAGATGCTTTAGGAAGATAAAAGT TTGAGGAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTTTCAAGAATGTCGCAATTACTAA GAAGCAGATAATGGTGTTTTTTAGAAACCTAATTGAAGTATATTCAACCAAATACTTTAATGTATAAAATAAATATTATACAATATACTT GTATAGCAGTTTCTGCTTCACATTTGATTTTTTCAAATTTAATATTTATATTAGAGATCTATATATGTATAAATATGTATTTTGTCAAAT TTGTTACTTAAATATATAGAGACCAGTTTTCTCTGGAAGTTTGTTTAAATGACAGAAGCGTATATGAATTCAAGAAAATTTAAGCTGCAA AAATGTATTTGCTATAAAATGAGAAGTCTCACTGATAGAGGTTCTTTATTGCTCATTTTTTAAAAAATGGACTCTTGAAATCTGTTAAAA >In-frame_ENST00000310858_ENST00000367041_TCGA-BR-8080-01A_TNS1_chr2_218745621_-_CD46_chr1_207930359_length(amino acids)=730AA_start in transcript=118_stop in transcript=2310 MTVRKVRHSVWEAVEFPFMVPFQQRKDCVLEGSTRVTPSVQPHLQPIRNMSVSRTMEDSCELDLVYVTERIIAVSFPSTANEENFRSNLR EVAQMLKSKHGGNYLLFNLSERRPDITKLHAKVLEFGWPDLHTPALEKICSICKAMDTWLNADPHNVVVLHNKGNRGRIGVVIAAYMHYS NISASADQALDRFAMKRFYEDKIVPIGQPSQRRYVHYFSGLLSGSIKMNNKPLFLHHVIMHGIPNFESKGGCRPFLRIYQAMQPVYTSGI YNIPGDSQTSVCITIEPGLLLKGDILLKCYHKKFRSPARDVIFRVQFHTCAIHDLGVVFGKEDLDDAFKDDRFPEYGKVEFVFSYGPEKI QGMEHLENGPSVSVDYNTSDPLIRWDSYDNFSGHRDDGMEDACEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDR NHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGK HTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQISGFGKKFYYKATVMFECDKGFYL DGSDTIVCDSNSTWDPPVPKCLKGPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPYRYLQRRKKKGTYLTDE -------------------------------------------------------------- >In-frame_ENST00000310858_ENST00000358170_TCGA-BR-8080-01A_TNS1_chr2_218745621_-_CD46_chr1_207930359_length(transcript)=4437nt_BP=1319nt GAGCCACCCAGTAGTGTCTGAGTGGTGATCCACTCTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGAATCTGCAGCAGGAAGG ATGAGGGTTAGATACCAGGAGGAAATTCCTGACAGTGAGAAAAGTAAGACACTCTGTCTGGGAGGCTGTCGAATTTCCTTTCATGGTGCC CTTTCAGCAAAGGAAGGATTGTGTTTTGGAGGGCTCCACCAGGGTCACCCCGAGTGTCCAGCCCCACCTCCAGCCCATCAGAAACATGAG TGTGAGCCGGACCATGGAGGACAGCTGTGAGCTGGACCTGGTGTACGTCACAGAGAGGATCATCGCTGTCTCCTTCCCCAGCACAGCCAA TGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAGGCAACTACCTGCTGTTCAACCTCTCTGA GCGGAGACCTGACATCACGAAGCTCCATGCCAAGGTACTGGAATTTGGCTGGCCCGACCTCCACACCCCAGCCCTGGAGAAGATCTGCAG CATCTGTAAGGCCATGGACACATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCTACACAACAAGGGAAACCGAGGCAGGATAGGAGT TGTCATCGCGGCTTACATGCACTACAGCAACATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATGAGGA TAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCATTACTTCAGTGGCCTGCTCTCCGGCTCCATCAAAATGAACAACAA GCCCTTGTTTCTGCACCACGTGATCATGCACGGCATCCCCAACTTTGAGTCTAAAGGAGGATGTCGGCCATTTCTCCGCATCTACCAGGC CATGCAACCTGTGTACACATCTGGCATCTACAACATCCCAGGAGACAGCCAGACTAGCGTCTGCATCACCATCGAGCCAGGACTGCTCTT GAAGGGAGACATCTTGCTGAAGTGCTACCACAAGAAGTTCCGAAGCCCAGCCCGAGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGC CATCCATGACCTGGGGGTTGTCTTTGGGAAGGAGGACCTTGATGATGCTTTCAAAGATGATCGATTTCCAGAGTATGGCAAAGTGGAGTT TGTATTTTCTTATGGGCCAGAGAAAATTCAAGGCATGGAGCACCTGGAGAACGGGCCGAGCGTGTCTGTGGACTATAACACCTCCGACCC CCTCATCCGCTGGGACTCCTACGACAACTTCAGTGGGCATCGAGATGACGGCATGGAGGATGCCTGTGAGGAGCCACCAACATTTGAAGC TATGGAGCTCATTGGTAAACCAAAACCCTACTATGAGATTGGTGAACGAGTAGATTATAAGTGTAAAAAAGGATACTTCTATATACCTCC TCTTGCCACCCATACTATTTGTGATCGGAATCATACATGGCTACCTGTCTCAGATGACGCCTGTTATAGAGAAACATGTCCATATATACG GGATCCTTTAAATGGCCAAGCAGTCCCTGCAAATGGGACTTACGAGTTTGGTTATCAGATGCACTTTATTTGTAATGAGGGTTATTACTT AATTGGTGAAGAAATTCTATATTGTGAACTTAAAGGATCAGTAGCAATTTGGAGCGGTAAGCCCCCAATATGTGAAAAGGTTTTGTGTAC ACCACCTCCAAAAATAAAAAATGGAAAACACACCTTTAGTGAAGTAGAAGTATTTGAGTATCTTGATGCAGTAACTTATAGTTGTGATCC TGCACCTGGACCAGATCCATTTTCACTTATTGGAGAGAGCACGATTTATTGTGGTGACAATTCAGTGTGGAGTCGTGCTGCTCCAGAGTG TAAAGTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGAAAACAGATATCAGGATTTGGAAAAAAATTTTACTACAAAGCAACAGTTAT GTTTGAATGCGATAAGGGTTTTTACCTCGATGGCAGCGACACAATTGTCTGTGACAGTAACAGTACTTGGGATCCCCCAGTTCCAAAGTG TCTTAAAGTGCTGCCTCCATCTAGTACAAAACCTCCAGCTTTGAGTCATTCAGTGTCGACTTCTTCCACTACAAAATCTCCAGCGTCCAG TGCCTCAGGTCCTAGGCCTACTTACAAGCCTCCAGTCTCAAATTATCCAGGATATCCTAAACCTGAGGAAGGAATACTTGACAGTTTGGA TGTTTGGGTCATTGCTGTGATTGTTATTGCCATAGTTGTTGGAGTTGCAGTAATTTGTGTTGTCCCGTACAGATATCTTCAAAGGAGGAA GAAGAAAGGCACATACCTAACTGATGAGACCCACAGAGAAGTAAAATTTACTTCTCTCTGAGAAGGAGAGATGAGAGAAAGGTTTGCTTT TATCATTAAAAGGAAAGCAGATGGTGGAGCTGAATATGCCACTTACCAGACTAAATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGA TTCCACAACCTGGTTTGCCAGTTCATCTTTTGACTCTATTAAAATCTTCAATAGTTGTTATTCTGTAGTTTCACTCTCATGAGTGCAACT GTGGCTTAGCTAATATTGCAATGTGGCTTGAATGTAGGTAGCATCCTTTGATGCTTCTTTGAAACTTGTATGAATTTGGGTATGAACAGA TTGCCTGCTTTCCCTTAAATAACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATTT TATAAAATTGGCAAAATTAGAGAAATATAGTTCACAATGAAATTATATTTTCTTTGTAAAGAAAGTGGCTTGAAATCTTTTTTGTTCAAA GATTAATGCCAACTCTTAAGATTATTCTTTCACCAACTATAGAATGTATTTTATATATCGTTCATTGTAAAAAGCCCTTAAAAATATGTG TATACTACTTTGGCTCTTGTGCATAAAAACAAGAACACTGAAAATTGGGAATATGCACAAACTTGGCTTCTTTAACCAAGAATATTATTG GAAAATTCTCTAAAAGTTAATAGGGTAAATTCTCTATTTTTTGTAATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCAT TTGTTTTCACTTTTTAAAACATCCCTAACTGATCGAATATATCAGTAATTTCAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACT CTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTT AGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCCCTCCTTAAATAAAGAGAGGGGTTAAACATGCCCTCTAAAAGT AGGTGGTTTTGAAGAGAATAAATTCATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTACATTGCCTTGGCTAGTAAAAGCCA TCTATGTATATGTCTTACCTCATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCTATTTGC TGTTGATTGTACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTCCCTTA GCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCATATCACACTGTTAAAAGTTGTGTTTTGAA ATTTTATGTTTAGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAAATCAAGAGTGTAGAAGAATAAATAC TGTTTTACTGTCCAAAGACATGTTTATAGTGCTCTGTAAATGTTCCTTTCCTTTGTAGTCTCTGGCAAGATGCTTTAGGAAGATAAAAGT TTGAGGAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTTTTCAAGAATGTCGCAATTACTAA GAAGCAGATAATGGTGTTTTTTAGAAACCTAATTGAAGTATATTCAACCAAATACTTTAATGTATAAAATAAATATTATACAATATACTT GTATAGCAGTTTCTGCTTCACATTTGATTTTTTCAAATTTAATATTTATATTAGAGATCTATATATGTATAAATATGTATTTTGTCAAAT TTGTTACTTAAATATATAGAGACCAGTTTTCTCTGGAAGTTTGTTTAAATGACAGAAGCGTATATGAATTCAAGAAAATTTAAGCTGCAA AAATGTATTTGCTATAAAATGAGAAGTCTCACTGATAGAGGTTCTTTATTGCTCATTTTTTAAAAAATGGACTCTTGAAATCTGTTAAAA >In-frame_ENST00000310858_ENST00000358170_TCGA-BR-8080-01A_TNS1_chr2_218745621_-_CD46_chr1_207930359_length(amino acids)=760AA_start in transcript=118_stop in transcript=2400 MTVRKVRHSVWEAVEFPFMVPFQQRKDCVLEGSTRVTPSVQPHLQPIRNMSVSRTMEDSCELDLVYVTERIIAVSFPSTANEENFRSNLR EVAQMLKSKHGGNYLLFNLSERRPDITKLHAKVLEFGWPDLHTPALEKICSICKAMDTWLNADPHNVVVLHNKGNRGRIGVVIAAYMHYS NISASADQALDRFAMKRFYEDKIVPIGQPSQRRYVHYFSGLLSGSIKMNNKPLFLHHVIMHGIPNFESKGGCRPFLRIYQAMQPVYTSGI YNIPGDSQTSVCITIEPGLLLKGDILLKCYHKKFRSPARDVIFRVQFHTCAIHDLGVVFGKEDLDDAFKDDRFPEYGKVEFVFSYGPEKI QGMEHLENGPSVSVDYNTSDPLIRWDSYDNFSGHRDDGMEDACEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDR NHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGK HTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQISGFGKKFYYKATVMFECDKGFYL DGSDTIVCDSNSTWDPPVPKCLKVLPPSSTKPPALSHSVSTSSTTKSPASSASGPRPTYKPPVSNYPGYPKPEEGILDSLDVWVIAVIVI -------------------------------------------------------------- >In-frame_ENST00000310858_ENST00000322918_TCGA-BR-8080-01A_TNS1_chr2_218745621_-_CD46_chr1_207930359_length(transcript)=4190nt_BP=1319nt GAGCCACCCAGTAGTGTCTGAGTGGTGATCCACTCTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGAATCTGCAGCAGGAAGG ATGAGGGTTAGATACCAGGAGGAAATTCCTGACAGTGAGAAAAGTAAGACACTCTGTCTGGGAGGCTGTCGAATTTCCTTTCATGGTGCC CTTTCAGCAAAGGAAGGATTGTGTTTTGGAGGGCTCCACCAGGGTCACCCCGAGTGTCCAGCCCCACCTCCAGCCCATCAGAAACATGAG TGTGAGCCGGACCATGGAGGACAGCTGTGAGCTGGACCTGGTGTACGTCACAGAGAGGATCATCGCTGTCTCCTTCCCCAGCACAGCCAA TGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAGGCAACTACCTGCTGTTCAACCTCTCTGA GCGGAGACCTGACATCACGAAGCTCCATGCCAAGGTACTGGAATTTGGCTGGCCCGACCTCCACACCCCAGCCCTGGAGAAGATCTGCAG CATCTGTAAGGCCATGGACACATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCTACACAACAAGGGAAACCGAGGCAGGATAGGAGT TGTCATCGCGGCTTACATGCACTACAGCAACATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATGAGGA TAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCATTACTTCAGTGGCCTGCTCTCCGGCTCCATCAAAATGAACAACAA GCCCTTGTTTCTGCACCACGTGATCATGCACGGCATCCCCAACTTTGAGTCTAAAGGAGGATGTCGGCCATTTCTCCGCATCTACCAGGC CATGCAACCTGTGTACACATCTGGCATCTACAACATCCCAGGAGACAGCCAGACTAGCGTCTGCATCACCATCGAGCCAGGACTGCTCTT GAAGGGAGACATCTTGCTGAAGTGCTACCACAAGAAGTTCCGAAGCCCAGCCCGAGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGC CATCCATGACCTGGGGGTTGTCTTTGGGAAGGAGGACCTTGATGATGCTTTCAAAGATGATCGATTTCCAGAGTATGGCAAAGTGGAGTT TGTATTTTCTTATGGGCCAGAGAAAATTCAAGGCATGGAGCACCTGGAGAACGGGCCGAGCGTGTCTGTGGACTATAACACCTCCGACCC CCTCATCCGCTGGGACTCCTACGACAACTTCAGTGGGCATCGAGATGACGGCATGGAGGATGCCTGTGAGGAGCCACCAACATTTGAAGC TATGGAGCTCATTGGTAAACCAAAACCCTACTATGAGATTGGTGAACGAGTAGATTATAAGTGTAAAAAAGGATACTTCTATATACCTCC TCTTGCCACCCATACTATTTGTGATCGGAATCATACATGGCTACCTGTCTCAGATGACGCCTGTTATAGAGAAACATGTCCATATATACG GGATCCTTTAAATGGCCAAGCAGTCCCTGCAAATGGGACTTACGAGTTTGGTTATCAGATGCACTTTATTTGTAATGAGGGTTATTACTT AATTGGTGAAGAAATTCTATATTGTGAACTTAAAGGATCAGTAGCAATTTGGAGCGGTAAGCCCCCAATATGTGAAAAGGTTTTGTGTAC ACCACCTCCAAAAATAAAAAATGGAAAACACACCTTTAGTGAAGTAGAAGTATTTGAGTATCTTGATGCAGTAACTTATAGTTGTGATCC TGCACCTGGACCAGATCCATTTTCACTTATTGGAGAGAGCACGATTTATTGTGGTGACAATTCAGTGTGGAGTCGTGCTGCTCCAGAGTG TAAAGTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGAAAACAGATATCAGGATTTGGAAAAAAATTTTACTACAAAGCAACAGTTAT GTTTGAATGCGATAAGGGTTTTTACCTCGATGGCAGCGACACAATTGTCTGTGACAGTAACAGTACTTGGGATCCCCCAGTTCCAAAGTG TCTTAAAGGTCCTAGGCCTACTTACAAGCCTCCAGTCTCAAATTATCCAGGATATCCTAAACCTGAGGAAGGAATACTTGACAGTTTGGA TGTTTGGGTCATTGCTGTGATTGTTATTGCCATAGGAAAGCAGATGGTGGAGCTGAATATGCCACTTACCAGACTAAATCAACCACTCCA GCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTTCATCTTTTGACTCTATTAAAATCTTCAATAGTTGTTATTCTGTA GTTTCACTCTCATGAGTGCAACTGTGGCTTAGCTAATATTGCAATGTGGCTTGAATGTAGGTAGCATCCTTTGATGCTTCTTTGAAACTT GTATGAATTTGGGTATGAACAGATTGCCTGCTTTCCCTTAAATAACACTTAGATTTATTGGACCAGTCAGCACAGCATGCCTGGTTGTAT TAAAGCAGGGATATGCTGTATTTTATAAAATTGGCAAAATTAGAGAAATATAGTTCACAATGAAATTATATTTTCTTTGTAAAGAAAGTG GCTTGAAATCTTTTTTGTTCAAAGATTAATGCCAACTCTTAAGATTATTCTTTCACCAACTATAGAATGTATTTTATATATCGTTCATTG TAAAAAGCCCTTAAAAATATGTGTATACTACTTTGGCTCTTGTGCATAAAAACAAGAACACTGAAAATTGGGAATATGCACAAACTTGGC TTCTTTAACCAAGAATATTATTGGAAAATTCTCTAAAAGTTAATAGGGTAAATTCTCTATTTTTTGTAATGTGTTCGGTGATTTCAGAAA GCTAGAAAGTGTATGTGTGGCATTTGTTTTCACTTTTTAAAACATCCCTAACTGATCGAATATATCAGTAATTTCAGAATCAGATGCATC CTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACACTGTAGTCTTGTTGTTTTCCCA AAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTCTCCCTCCTTAAATAAAGAGAGG GGTTAAACATGCCCTCTAAAAGTAGGTGGTTTTGAAGAGAATAAATTCATCAGATAACCTCAAGTCACATGAGAATCTTAGTCCATTTAC ATTGCCTTGGCTAGTAAAAGCCATCTATGTATATGTCTTACCTCATCTCCTAAAAGGCAGAGTACAAAGTAAGCCATGTATCTCAGGAAG GTAACTTCATTTTGTCTATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTAGCACTTTATACTCAGGCAGATC TCAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGACTGCCACTGCATTTCATATCAC ACTGTTAAAAGTTGTGTTTTGAAATTTTATGTTTAGTTGCACAAATTGGGCCAAAGAAACATTGCCTTGAGGAAGATATGATTGGAAAAT CAAGAGTGTAGAAGAATAAATACTGTTTTACTGTCCAAAGACATGTTTATAGTGCTCTGTAAATGTTCCTTTCCTTTGTAGTCTCTGGCA AGATGCTTTAGGAAGATAAAAGTTTGAGGAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAGTTTATACCCGTTTCACATGCTT TTCAAGAATGTCGCAATTACTAAGAAGCAGATAATGGTGTTTTTTAGAAACCTAATTGAAGTATATTCAACCAAATACTTTAATGTATAA AATAAATATTATACAATATACTTGTATAGCAGTTTCTGCTTCACATTTGATTTTTTCAAATTTAATATTTATATTAGAGATCTATATATG TATAAATATGTATTTTGTCAAATTTGTTACTTAAATATATAGAGACCAGTTTTCTCTGGAAGTTTGTTTAAATGACAGAAGCGTATATGA ATTCAAGAAAATTTAAGCTGCAAAAATGTATTTGCTATAAAATGAGAAGTCTCACTGATAGAGGTTCTTTATTGCTCATTTTTTAAAAAA >In-frame_ENST00000310858_ENST00000322918_TCGA-BR-8080-01A_TNS1_chr2_218745621_-_CD46_chr1_207930359_length(amino acids)=717AA_start in transcript=118_stop in transcript=2271 MTVRKVRHSVWEAVEFPFMVPFQQRKDCVLEGSTRVTPSVQPHLQPIRNMSVSRTMEDSCELDLVYVTERIIAVSFPSTANEENFRSNLR EVAQMLKSKHGGNYLLFNLSERRPDITKLHAKVLEFGWPDLHTPALEKICSICKAMDTWLNADPHNVVVLHNKGNRGRIGVVIAAYMHYS NISASADQALDRFAMKRFYEDKIVPIGQPSQRRYVHYFSGLLSGSIKMNNKPLFLHHVIMHGIPNFESKGGCRPFLRIYQAMQPVYTSGI YNIPGDSQTSVCITIEPGLLLKGDILLKCYHKKFRSPARDVIFRVQFHTCAIHDLGVVFGKEDLDDAFKDDRFPEYGKVEFVFSYGPEKI QGMEHLENGPSVSVDYNTSDPLIRWDSYDNFSGHRDDGMEDACEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDR NHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGK HTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQISGFGKKFYYKATVMFECDKGFYL -------------------------------------------------------------- >In-frame_ENST00000310858_ENST00000361067_TCGA-BR-8080-01A_TNS1_chr2_218745621_-_CD46_chr1_207930359_length(transcript)=4302nt_BP=1319nt GAGCCACCCAGTAGTGTCTGAGTGGTGATCCACTCTTGCCTGCAATGAGGACCAAGGCAAAAAGAGTTGGCTGAATCTGCAGCAGGAAGG ATGAGGGTTAGATACCAGGAGGAAATTCCTGACAGTGAGAAAAGTAAGACACTCTGTCTGGGAGGCTGTCGAATTTCCTTTCATGGTGCC CTTTCAGCAAAGGAAGGATTGTGTTTTGGAGGGCTCCACCAGGGTCACCCCGAGTGTCCAGCCCCACCTCCAGCCCATCAGAAACATGAG TGTGAGCCGGACCATGGAGGACAGCTGTGAGCTGGACCTGGTGTACGTCACAGAGAGGATCATCGCTGTCTCCTTCCCCAGCACAGCCAA TGAGGAGAACTTCCGGAGCAACCTCCGTGAGGTGGCGCAGATGCTCAAGTCCAAACATGGAGGCAACTACCTGCTGTTCAACCTCTCTGA GCGGAGACCTGACATCACGAAGCTCCATGCCAAGGTACTGGAATTTGGCTGGCCCGACCTCCACACCCCAGCCCTGGAGAAGATCTGCAG CATCTGTAAGGCCATGGACACATGGCTCAATGCAGACCCTCACAATGTCGTTGTTCTACACAACAAGGGAAACCGAGGCAGGATAGGAGT TGTCATCGCGGCTTACATGCACTACAGCAACATTTCTGCCAGTGCGGACCAGGCTCTGGACCGGTTTGCAATGAAGCGGTTCTATGAGGA TAAGATTGTGCCCATTGGCCAGCCATCCCAAAGAAGGTACGTGCATTACTTCAGTGGCCTGCTCTCCGGCTCCATCAAAATGAACAACAA GCCCTTGTTTCTGCACCACGTGATCATGCACGGCATCCCCAACTTTGAGTCTAAAGGAGGATGTCGGCCATTTCTCCGCATCTACCAGGC CATGCAACCTGTGTACACATCTGGCATCTACAACATCCCAGGAGACAGCCAGACTAGCGTCTGCATCACCATCGAGCCAGGACTGCTCTT GAAGGGAGACATCTTGCTGAAGTGCTACCACAAGAAGTTCCGAAGCCCAGCCCGAGACGTCATCTTCCGTGTGCAGTTCCACACCTGTGC CATCCATGACCTGGGGGTTGTCTTTGGGAAGGAGGACCTTGATGATGCTTTCAAAGATGATCGATTTCCAGAGTATGGCAAAGTGGAGTT TGTATTTTCTTATGGGCCAGAGAAAATTCAAGGCATGGAGCACCTGGAGAACGGGCCGAGCGTGTCTGTGGACTATAACACCTCCGACCC CCTCATCCGCTGGGACTCCTACGACAACTTCAGTGGGCATCGAGATGACGGCATGGAGGATGCCTGTGAGGAGCCACCAACATTTGAAGC TATGGAGCTCATTGGTAAACCAAAACCCTACTATGAGATTGGTGAACGAGTAGATTATAAGTGTAAAAAAGGATACTTCTATATACCTCC TCTTGCCACCCATACTATTTGTGATCGGAATCATACATGGCTACCTGTCTCAGATGACGCCTGTTATAGAGAAACATGTCCATATATACG GGATCCTTTAAATGGCCAAGCAGTCCCTGCAAATGGGACTTACGAGTTTGGTTATCAGATGCACTTTATTTGTAATGAGGGTTATTACTT AATTGGTGAAGAAATTCTATATTGTGAACTTAAAGGATCAGTAGCAATTTGGAGCGGTAAGCCCCCAATATGTGAAAAGGTTTTGTGTAC ACCACCTCCAAAAATAAAAAATGGAAAACACACCTTTAGTGAAGTAGAAGTATTTGAGTATCTTGATGCAGTAACTTATAGTTGTGATCC TGCACCTGGACCAGATCCATTTTCACTTATTGGAGAGAGCACGATTTATTGTGGTGACAATTCAGTGTGGAGTCGTGCTGCTCCAGAGTG TAAAGTGGTCAAATGTCGATTTCCAGTAGTCGAAAATGGAAAACAGATATCAGGATTTGGAAAAAAATTTTACTACAAAGCAACAGTTAT GTTTGAATGCGATAAGGGTTTTTACCTCGATGGCAGCGACACAATTGTCTGTGACAGTAACAGTACTTGGGATCCCCCAGTTCCAAAGTG TCTTAAAGTGCTGCCTCCATCTAGTACAAAACCTCCAGCTTTGAGTCATTCAGTGTCGACTTCTTCCACTACAAAATCTCCAGCGTCCAG TGCCTCAGGATATCCTAAACCTGAGGAAGGAATACTTGACAGTTTGGATGTTTGGGTCATTGCTGTGATTGTTATTGCCATAGTTGTTGG AGTTGCAGTAATTTGTGTTGTCCCGTACAGATATCTTCAAAGGAGGAAGAAGAAAGGGAAAGCAGATGGTGGAGCTGAATATGCCACTTA CCAGACTAAATCAACCACTCCAGCAGAGCAGAGAGGCTGAATAGATTCCACAACCTGGTTTGCCAGTTCATCTTTTGACTCTATTAAAAT CTTCAATAGTTGTTATTCTGTAGTTTCACTCTCATGAGTGCAACTGTGGCTTAGCTAATATTGCAATGTGGCTTGAATGTAGGTAGCATC CTTTGATGCTTCTTTGAAACTTGTATGAATTTGGGTATGAACAGATTGCCTGCTTTCCCTTAAATAACACTTAGATTTATTGGACCAGTC AGCACAGCATGCCTGGTTGTATTAAAGCAGGGATATGCTGTATTTTATAAAATTGGCAAAATTAGAGAAATATAGTTCACAATGAAATTA TATTTTCTTTGTAAAGAAAGTGGCTTGAAATCTTTTTTGTTCAAAGATTAATGCCAACTCTTAAGATTATTCTTTCACCAACTATAGAAT GTATTTTATATATCGTTCATTGTAAAAAGCCCTTAAAAATATGTGTATACTACTTTGGCTCTTGTGCATAAAAACAAGAACACTGAAAAT TGGGAATATGCACAAACTTGGCTTCTTTAACCAAGAATATTATTGGAAAATTCTCTAAAAGTTAATAGGGTAAATTCTCTATTTTTTGTA ATGTGTTCGGTGATTTCAGAAAGCTAGAAAGTGTATGTGTGGCATTTGTTTTCACTTTTTAAAACATCCCTAACTGATCGAATATATCAG TAATTTCAGAATCAGATGCATCCTTTCATAAGAAGTGAGAGGACTCTGACAGCCATAACAGGAGTGCCACTTCATGGTGCGAAGTGAACA CTGTAGTCTTGTTGTTTTCCCAAAGAGAACTCCGTATGTTCTCTTAGGTTGAGTAACCCACTCTGAATTCTGGTTACATGTGTTTTTCTC TCCCTCCTTAAATAAAGAGAGGGGTTAAACATGCCCTCTAAAAGTAGGTGGTTTTGAAGAGAATAAATTCATCAGATAACCTCAAGTCAC ATGAGAATCTTAGTCCATTTACATTGCCTTGGCTAGTAAAAGCCATCTATGTATATGTCTTACCTCATCTCCTAAAAGGCAGAGTACAAA GTAAGCCATGTATCTCAGGAAGGTAACTTCATTTTGTCTATTTGCTGTTGATTGTACCAAGGGATGGAAGAAGTAAATATAGCTCAGGTA GCACTTTATACTCAGGCAGATCTCAGCCCTCTACTGAGTCCCTTAGCCAAGCAGTTTCTTTCAAAGAAGCCAGCAGGCGAAAAGCAGGGA CTGCCACTGCATTTCATATCACACTGTTAAAAGTTGTGTTTTGAAATTTTATGTTTAGTTGCACAAATTGGGCCAAAGAAACATTGCCTT GAGGAAGATATGATTGGAAAATCAAGAGTGTAGAAGAATAAATACTGTTTTACTGTCCAAAGACATGTTTATAGTGCTCTGTAAATGTTC CTTTCCTTTGTAGTCTCTGGCAAGATGCTTTAGGAAGATAAAAGTTTGAGGAGAACAAACAGGAATTCTGAATTAAGCACAGAGTTGAAG TTTATACCCGTTTCACATGCTTTTCAAGAATGTCGCAATTACTAAGAAGCAGATAATGGTGTTTTTTAGAAACCTAATTGAAGTATATTC AACCAAATACTTTAATGTATAAAATAAATATTATACAATATACTTGTATAGCAGTTTCTGCTTCACATTTGATTTTTTCAAATTTAATAT TTATATTAGAGATCTATATATGTATAAATATGTATTTTGTCAAATTTGTTACTTAAATATATAGAGACCAGTTTTCTCTGGAAGTTTGTT TAAATGACAGAAGCGTATATGAATTCAAGAAAATTTAAGCTGCAAAAATGTATTTGCTATAAAATGAGAAGTCTCACTGATAGAGGTTCT >In-frame_ENST00000310858_ENST00000361067_TCGA-BR-8080-01A_TNS1_chr2_218745621_-_CD46_chr1_207930359_length(amino acids)=753AA_start in transcript=118_stop in transcript=2379 MTVRKVRHSVWEAVEFPFMVPFQQRKDCVLEGSTRVTPSVQPHLQPIRNMSVSRTMEDSCELDLVYVTERIIAVSFPSTANEENFRSNLR EVAQMLKSKHGGNYLLFNLSERRPDITKLHAKVLEFGWPDLHTPALEKICSICKAMDTWLNADPHNVVVLHNKGNRGRIGVVIAAYMHYS NISASADQALDRFAMKRFYEDKIVPIGQPSQRRYVHYFSGLLSGSIKMNNKPLFLHHVIMHGIPNFESKGGCRPFLRIYQAMQPVYTSGI YNIPGDSQTSVCITIEPGLLLKGDILLKCYHKKFRSPARDVIFRVQFHTCAIHDLGVVFGKEDLDDAFKDDRFPEYGKVEFVFSYGPEKI QGMEHLENGPSVSVDYNTSDPLIRWDSYDNFSGHRDDGMEDACEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDR NHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGK HTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQISGFGKKFYYKATVMFECDKGFYL DGSDTIVCDSNSTWDPPVPKCLKVLPPSSTKPPALSHSVSTSSTTKSPASSASGYPKPEEGILDSLDVWVIAVIVIAIVVGVAVICVVPY -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for TNS1-CD46 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for TNS1-CD46 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for TNS1-CD46 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | CD46 | C2752040 | HEMOLYTIC UREMIC SYNDROME, ATYPICAL, SUSCEPTIBILITY TO, 2 | 6 | GENOMICS_ENGLAND;UNIPROT |
Tgene | CD46 | C2931788 | Atypical Hemolytic Uremic Syndrome | 2 | CTD_human;GENOMICS_ENGLAND |
Tgene | CD46 | C0019061 | Hemolytic-Uremic Syndrome | 1 | GENOMICS_ENGLAND |
Tgene | CD46 | C0025007 | Measles | 1 | CTD_human |
Tgene | CD46 | C0162739 | HELLP Syndrome | 1 | ORPHANET |
Tgene | CD46 | C0272242 | Complement deficiency disease | 1 | GENOMICS_ENGLAND |
Tgene | CD46 | C3658266 | Prostatic Cancer, Castration-Resistant | 1 | CTD_human |
Tgene | CD46 | C3658267 | Prostatic Neoplasms, Castration-Resistant | 1 | CTD_human |
Tgene | CD46 | C4087273 | C3 glomerulopathy | 1 | GENOMICS_ENGLAND |