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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:TOM1L1-STXBP4 (FusionGDB2 ID:92354) |
Fusion Gene Summary for TOM1L1-STXBP4 |
Fusion gene summary |
Fusion gene information | Fusion gene name: TOM1L1-STXBP4 | Fusion gene ID: 92354 | Hgene | Tgene | Gene symbol | TOM1L1 | STXBP4 | Gene ID | 10040 | 252983 |
Gene name | target of myb1 like 1 membrane trafficking protein | syntaxin binding protein 4 | |
Synonyms | SRCASM | Synip | |
Cytomap | 17q22 | 17q22 | |
Type of gene | protein-coding | protein-coding | |
Description | TOM1-like protein 1src-activating and signaling molecule proteintarget of Myb-like protein 1 | syntaxin-binding protein 4STX4-interacting proteinsyntaxin 4 interacting protein | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000570371, ENST00000574744, ENST00000575882, ENST00000445275, ENST00000348161, ENST00000572405, ENST00000572158, ENST00000540336, ENST00000536554, ENST00000575333, | ENST00000299341, ENST00000376352, ENST00000405898, ENST00000434978, ENST00000398391, | |
Fusion gene scores | * DoF score | 5 X 5 X 3=75 | 15 X 12 X 9=1620 |
# samples | 6 | 16 | |
** MAII score | log2(6/75*10)=-0.321928094887362 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(16/1620*10)=-3.33985000288463 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: TOM1L1 [Title/Abstract] AND STXBP4 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | STXBP4(53046176)-TOM1L1(53024621), # samples:1 TOM1L1(52982928)-STXBP4(53108529), # samples:1 TOM1L1(53027487)-STXBP4(53218671), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | TOM1L1 | GO:0007165 | signal transduction | 16479011 |
Hgene | TOM1L1 | GO:0031954 | positive regulation of protein autophosphorylation | 16479011 |
Hgene | TOM1L1 | GO:0032147 | activation of protein kinase activity | 16479011 |
Hgene | TOM1L1 | GO:0045839 | negative regulation of mitotic nuclear division | 16479011 |
Hgene | TOM1L1 | GO:2000278 | regulation of DNA biosynthetic process | 16479011 |
Tgene | STXBP4 | GO:0006974 | cellular response to DNA damage stimulus | 19451233 |
Tgene | STXBP4 | GO:0061178 | regulation of insulin secretion involved in cellular response to glucose stimulus | 12855681 |
Fusion gene breakpoints across TOM1L1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across STXBP4 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-A2-A3Y0-01A | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
ChimerDB4 | STAD | TCGA-HU-A4GF-01A | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
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Fusion Gene ORF analysis for TOM1L1-STXBP4 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000570371 | ENST00000299341 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000570371 | ENST00000376352 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000570371 | ENST00000405898 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000570371 | ENST00000434978 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000570371 | ENST00000398391 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
intron-3CDS | ENST00000574744 | ENST00000299341 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
intron-3CDS | ENST00000574744 | ENST00000376352 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
intron-3CDS | ENST00000574744 | ENST00000405898 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
intron-3CDS | ENST00000574744 | ENST00000434978 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
intron-3CDS | ENST00000574744 | ENST00000398391 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000575882 | ENST00000299341 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000575882 | ENST00000376352 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000575882 | ENST00000405898 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000575882 | ENST00000434978 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000575882 | ENST00000398391 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000445275 | ENST00000299341 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000445275 | ENST00000376352 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000445275 | ENST00000405898 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000445275 | ENST00000434978 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000445275 | ENST00000398391 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
5UTR-3CDS | ENST00000348161 | ENST00000299341 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
5UTR-3CDS | ENST00000348161 | ENST00000376352 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
5UTR-3CDS | ENST00000348161 | ENST00000405898 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
5UTR-3CDS | ENST00000348161 | ENST00000434978 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
5UTR-3CDS | ENST00000348161 | ENST00000398391 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000572405 | ENST00000299341 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000572405 | ENST00000376352 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000572405 | ENST00000405898 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000572405 | ENST00000434978 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000572405 | ENST00000398391 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000572158 | ENST00000299341 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000572158 | ENST00000376352 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000572158 | ENST00000405898 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000572158 | ENST00000434978 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000572158 | ENST00000398391 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
intron-3CDS | ENST00000540336 | ENST00000299341 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
intron-3CDS | ENST00000540336 | ENST00000376352 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
intron-3CDS | ENST00000540336 | ENST00000405898 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
intron-3CDS | ENST00000540336 | ENST00000434978 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
intron-3CDS | ENST00000540336 | ENST00000398391 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
intron-3CDS | ENST00000536554 | ENST00000299341 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
intron-3CDS | ENST00000536554 | ENST00000376352 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
intron-3CDS | ENST00000536554 | ENST00000405898 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
intron-3CDS | ENST00000536554 | ENST00000434978 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
intron-3CDS | ENST00000536554 | ENST00000398391 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000575333 | ENST00000299341 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000575333 | ENST00000376352 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000575333 | ENST00000405898 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000575333 | ENST00000434978 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
In-frame | ENST00000575333 | ENST00000398391 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + |
intron-intron | ENST00000570371 | ENST00000299341 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000570371 | ENST00000376352 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000570371 | ENST00000405898 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000570371 | ENST00000434978 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000570371 | ENST00000398391 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000574744 | ENST00000299341 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000574744 | ENST00000376352 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000574744 | ENST00000405898 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000574744 | ENST00000434978 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000574744 | ENST00000398391 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000575882 | ENST00000299341 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000575882 | ENST00000376352 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000575882 | ENST00000405898 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000575882 | ENST00000434978 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000575882 | ENST00000398391 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000445275 | ENST00000299341 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000445275 | ENST00000376352 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000445275 | ENST00000405898 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000445275 | ENST00000434978 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000445275 | ENST00000398391 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000348161 | ENST00000299341 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000348161 | ENST00000376352 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000348161 | ENST00000405898 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000348161 | ENST00000434978 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000348161 | ENST00000398391 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000572405 | ENST00000299341 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000572405 | ENST00000376352 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000572405 | ENST00000405898 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000572405 | ENST00000434978 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000572405 | ENST00000398391 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000572158 | ENST00000299341 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000572158 | ENST00000376352 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000572158 | ENST00000405898 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000572158 | ENST00000434978 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000572158 | ENST00000398391 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000540336 | ENST00000299341 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000540336 | ENST00000376352 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000540336 | ENST00000405898 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000540336 | ENST00000434978 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000540336 | ENST00000398391 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000536554 | ENST00000299341 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000536554 | ENST00000376352 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000536554 | ENST00000405898 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000536554 | ENST00000434978 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
5CDS-intron | ENST00000536554 | ENST00000398391 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000575333 | ENST00000299341 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000575333 | ENST00000376352 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000575333 | ENST00000405898 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000575333 | ENST00000434978 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
intron-intron | ENST00000575333 | ENST00000398391 | TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218671 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000570371 | TOM1L1 | chr17 | 52982928 | + | ENST00000299341 | STXBP4 | chr17 | 53108529 | + | 1838 | 1541 | 788 | 1837 | 350 |
ENST00000570371 | TOM1L1 | chr17 | 52982928 | + | ENST00000376352 | STXBP4 | chr17 | 53108529 | + | 6911 | 1541 | 788 | 2536 | 582 |
ENST00000570371 | TOM1L1 | chr17 | 52982928 | + | ENST00000405898 | STXBP4 | chr17 | 53108529 | + | 2985 | 1541 | 788 | 1837 | 349 |
ENST00000570371 | TOM1L1 | chr17 | 52982928 | + | ENST00000434978 | STXBP4 | chr17 | 53108529 | + | 3486 | 1541 | 788 | 2470 | 560 |
ENST00000570371 | TOM1L1 | chr17 | 52982928 | + | ENST00000398391 | STXBP4 | chr17 | 53108529 | + | 2985 | 1541 | 788 | 1837 | 349 |
ENST00000575882 | TOM1L1 | chr17 | 52982928 | + | ENST00000299341 | STXBP4 | chr17 | 53108529 | + | 872 | 575 | 71 | 871 | 267 |
ENST00000575882 | TOM1L1 | chr17 | 52982928 | + | ENST00000376352 | STXBP4 | chr17 | 53108529 | + | 5945 | 575 | 71 | 1570 | 499 |
ENST00000575882 | TOM1L1 | chr17 | 52982928 | + | ENST00000405898 | STXBP4 | chr17 | 53108529 | + | 2019 | 575 | 71 | 871 | 266 |
ENST00000575882 | TOM1L1 | chr17 | 52982928 | + | ENST00000434978 | STXBP4 | chr17 | 53108529 | + | 2520 | 575 | 71 | 1504 | 477 |
ENST00000575882 | TOM1L1 | chr17 | 52982928 | + | ENST00000398391 | STXBP4 | chr17 | 53108529 | + | 2019 | 575 | 71 | 871 | 266 |
ENST00000445275 | TOM1L1 | chr17 | 52982928 | + | ENST00000299341 | STXBP4 | chr17 | 53108529 | + | 633 | 336 | 114 | 632 | 172 |
ENST00000445275 | TOM1L1 | chr17 | 52982928 | + | ENST00000376352 | STXBP4 | chr17 | 53108529 | + | 5706 | 336 | 114 | 1331 | 405 |
ENST00000445275 | TOM1L1 | chr17 | 52982928 | + | ENST00000405898 | STXBP4 | chr17 | 53108529 | + | 1780 | 336 | 114 | 632 | 172 |
ENST00000445275 | TOM1L1 | chr17 | 52982928 | + | ENST00000434978 | STXBP4 | chr17 | 53108529 | + | 2281 | 336 | 114 | 1265 | 383 |
ENST00000445275 | TOM1L1 | chr17 | 52982928 | + | ENST00000398391 | STXBP4 | chr17 | 53108529 | + | 1780 | 336 | 114 | 632 | 172 |
ENST00000572405 | TOM1L1 | chr17 | 52982928 | + | ENST00000299341 | STXBP4 | chr17 | 53108529 | + | 546 | 249 | 132 | 545 | 137 |
ENST00000572405 | TOM1L1 | chr17 | 52982928 | + | ENST00000376352 | STXBP4 | chr17 | 53108529 | + | 5619 | 249 | 132 | 1244 | 370 |
ENST00000572405 | TOM1L1 | chr17 | 52982928 | + | ENST00000405898 | STXBP4 | chr17 | 53108529 | + | 1693 | 249 | 132 | 545 | 137 |
ENST00000572405 | TOM1L1 | chr17 | 52982928 | + | ENST00000434978 | STXBP4 | chr17 | 53108529 | + | 2194 | 249 | 132 | 1178 | 348 |
ENST00000572405 | TOM1L1 | chr17 | 52982928 | + | ENST00000398391 | STXBP4 | chr17 | 53108529 | + | 1693 | 249 | 132 | 545 | 137 |
ENST00000572158 | TOM1L1 | chr17 | 52982928 | + | ENST00000299341 | STXBP4 | chr17 | 53108529 | + | 549 | 252 | 30 | 548 | 172 |
ENST00000572158 | TOM1L1 | chr17 | 52982928 | + | ENST00000376352 | STXBP4 | chr17 | 53108529 | + | 5622 | 252 | 30 | 1247 | 405 |
ENST00000572158 | TOM1L1 | chr17 | 52982928 | + | ENST00000405898 | STXBP4 | chr17 | 53108529 | + | 1696 | 252 | 30 | 548 | 172 |
ENST00000572158 | TOM1L1 | chr17 | 52982928 | + | ENST00000434978 | STXBP4 | chr17 | 53108529 | + | 2197 | 252 | 30 | 1181 | 383 |
ENST00000572158 | TOM1L1 | chr17 | 52982928 | + | ENST00000398391 | STXBP4 | chr17 | 53108529 | + | 1696 | 252 | 30 | 548 | 172 |
ENST00000575333 | TOM1L1 | chr17 | 52982928 | + | ENST00000299341 | STXBP4 | chr17 | 53108529 | + | 528 | 231 | 9 | 527 | 172 |
ENST00000575333 | TOM1L1 | chr17 | 52982928 | + | ENST00000376352 | STXBP4 | chr17 | 53108529 | + | 5601 | 231 | 9 | 1226 | 405 |
ENST00000575333 | TOM1L1 | chr17 | 52982928 | + | ENST00000405898 | STXBP4 | chr17 | 53108529 | + | 1675 | 231 | 9 | 527 | 172 |
ENST00000575333 | TOM1L1 | chr17 | 52982928 | + | ENST00000434978 | STXBP4 | chr17 | 53108529 | + | 2176 | 231 | 9 | 1160 | 383 |
ENST00000575333 | TOM1L1 | chr17 | 52982928 | + | ENST00000398391 | STXBP4 | chr17 | 53108529 | + | 1675 | 231 | 9 | 527 | 172 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000570371 | ENST00000299341 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.16560261 | 0.83439744 |
ENST00000570371 | ENST00000376352 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.000564998 | 0.999435 |
ENST00000570371 | ENST00000405898 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.058170334 | 0.9418296 |
ENST00000570371 | ENST00000434978 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.003621766 | 0.99637824 |
ENST00000570371 | ENST00000398391 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.058170334 | 0.9418296 |
ENST00000575882 | ENST00000299341 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.00785184 | 0.9921482 |
ENST00000575882 | ENST00000376352 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.000402127 | 0.99959785 |
ENST00000575882 | ENST00000405898 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.002836769 | 0.99716324 |
ENST00000575882 | ENST00000434978 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.001885488 | 0.9981146 |
ENST00000575882 | ENST00000398391 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.002836769 | 0.99716324 |
ENST00000445275 | ENST00000299341 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.004245502 | 0.9957545 |
ENST00000445275 | ENST00000376352 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.000370653 | 0.9996294 |
ENST00000445275 | ENST00000405898 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.003197901 | 0.9968021 |
ENST00000445275 | ENST00000434978 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.00117695 | 0.998823 |
ENST00000445275 | ENST00000398391 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.003197901 | 0.9968021 |
ENST00000572405 | ENST00000299341 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.004932108 | 0.99506783 |
ENST00000572405 | ENST00000376352 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.000250221 | 0.9997497 |
ENST00000572405 | ENST00000405898 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.006150645 | 0.99384934 |
ENST00000572405 | ENST00000434978 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.000764056 | 0.999236 |
ENST00000572405 | ENST00000398391 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.006150645 | 0.99384934 |
ENST00000572158 | ENST00000299341 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.001900294 | 0.99809974 |
ENST00000572158 | ENST00000376352 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.000356936 | 0.9996431 |
ENST00000572158 | ENST00000405898 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.00184649 | 0.9981535 |
ENST00000572158 | ENST00000434978 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.0011124 | 0.9988876 |
ENST00000572158 | ENST00000398391 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.00184649 | 0.9981535 |
ENST00000575333 | ENST00000299341 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.002589924 | 0.9974101 |
ENST00000575333 | ENST00000376352 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.00035812 | 0.9996419 |
ENST00000575333 | ENST00000405898 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.001643545 | 0.9983564 |
ENST00000575333 | ENST00000434978 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.001142526 | 0.9988575 |
ENST00000575333 | ENST00000398391 | TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108529 | + | 0.001643545 | 0.9983564 |
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Fusion Genomic Features for TOM1L1-STXBP4 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218670 | + | 0.032161873 | 0.9678381 |
TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108528 | + | 0.002935083 | 0.9970649 |
TOM1L1 | chr17 | 53027487 | + | STXBP4 | chr17 | 53218670 | + | 0.032161873 | 0.9678381 |
TOM1L1 | chr17 | 52982928 | + | STXBP4 | chr17 | 53108528 | + | 0.002935083 | 0.9970649 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for TOM1L1-STXBP4 |
Go to FGviewer for the breakpoints of chr17:52982928-chr17:53108529 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | STXBP4 | chr17:52982928 | chr17:53108529 | ENST00000299341 | 7 | 12 | 291_417 | 147.0 | 246.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | STXBP4 | chr17:52982928 | chr17:53108529 | ENST00000376352 | 7 | 18 | 291_417 | 222.0 | 554.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | STXBP4 | chr17:52982928 | chr17:53108529 | ENST00000398391 | 6 | 11 | 291_417 | 147.0 | 246.0 | Coiled coil | Ontology_term=ECO:0000255 | |
Tgene | STXBP4 | chr17:52982928 | chr17:53108529 | ENST00000299341 | 7 | 12 | 496_529 | 147.0 | 246.0 | Domain | WW | |
Tgene | STXBP4 | chr17:52982928 | chr17:53108529 | ENST00000376352 | 7 | 18 | 496_529 | 222.0 | 554.0 | Domain | WW | |
Tgene | STXBP4 | chr17:52982928 | chr17:53108529 | ENST00000398391 | 6 | 11 | 496_529 | 147.0 | 246.0 | Domain | WW |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TOM1L1 | chr17:52982928 | chr17:53108529 | ENST00000575882 | + | 3 | 16 | 200_288 | 74.0 | 578.3333333333334 | Domain | GAT |
Hgene | TOM1L1 | chr17:52982928 | chr17:53108529 | ENST00000575882 | + | 3 | 16 | 22_154 | 74.0 | 578.3333333333334 | Domain | VHS |
Hgene | TOM1L1 | chr17:52982928 | chr17:53108529 | ENST00000575882 | + | 3 | 16 | 421_425 | 74.0 | 578.3333333333334 | Motif | SH3-binding |
Hgene | TOM1L1 | chr17:52982928 | chr17:53108529 | ENST00000575882 | + | 3 | 16 | 460_463 | 74.0 | 578.3333333333334 | Motif | SH2-binding |
Tgene | STXBP4 | chr17:52982928 | chr17:53108529 | ENST00000299341 | 7 | 12 | 19_105 | 147.0 | 246.0 | Domain | PDZ | |
Tgene | STXBP4 | chr17:52982928 | chr17:53108529 | ENST00000376352 | 7 | 18 | 19_105 | 222.0 | 554.0 | Domain | PDZ | |
Tgene | STXBP4 | chr17:52982928 | chr17:53108529 | ENST00000398391 | 6 | 11 | 19_105 | 147.0 | 246.0 | Domain | PDZ |
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Fusion Gene Sequence for TOM1L1-STXBP4 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000570371_ENST00000299341_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=1838nt_BP=1541nt TGAGTAAGGAAGTTGATAAACGGCAACATCTGAAATAGCTACTCGCCCTGAATAGGCAGGTGGAGAATATTAGTTACACGTGGGACAAAT CCCATTATGAGACATATCATCACAACAAGAATATTTCATTCTAGATTTTAGAATCCCAGGTTTTGGCTCACTTTGGTCAAGAAAAATTAT AAATAATTGAGTTACAGATAATTAAATGTTAGCCTCCTGGAGTGCATGGCAATTGGTTTTGACCTCTATATTAAAATTCACAAGACCACG GACATAAGTCAAAACAGGTCCCCTTCGTCTCCCTAGTCACCATCTCCAGGGCTAAAAAACAGACTTGAAATGGGTGGCAGTTAGACTACA GGAAACAGGATCTACAAGCACCAGGAGCTCATCTATGGCTATCTGACATCGCCTGGGGACACCTCACTCTCTGGCAGGCTCCTGCTGGCT GGAGATTGTTAACATCGCCAATCAGATGTTAATTGAATGCAAAGGAATAGGAAATAAATTCTGGTTCTGAAGGGGCAGCTGGAAAGGTGT TGGGCTTCTCAGATTCCAACCTACATTACAAAGCAGGCCTAAAGCCAAGCATACTCCTTGCCAGAAGAAACGGAAAGCCCCTCTCCCGTT TTTAGAATCAGGCTGGAAAACACGGCTCCCAGAAGGTGGGGTTAGAAAACAAGAGCTTGCGAGGCGGCGCCCTGTGGTCCCTCGAGGAAA TAGTAGAGAGACAAAGAGGGCCTGCTCCTGGGAAGCCCTAAATTCGAAGCCAATCCTTCCTCCTAGACATGACCACAACTTTAAAGGGCA GGGCGCACACCTCCCCTCCCGGATCTCTAGGACAAAGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGA TCAAAGCCTGGGTCTCTAATTCCCAGGCTGGAGATTCTGGGCTGCCTGCTCCTCCTGCACGGGGCGAAAAGCCCACCTGGGATCCGAGCG GGCGGCCGCGCCACTCTCGCAGGCTCCATACACCCGCCACTACCCGCCTGTACCACCTGCAGCCGGCAGCGCAGCCTCCTCGCGGGTCCC GCAGGGCGCGCTGCAGGTGCGCTGGGCGTCCCGAAGCCCCGCCCTCGCGTCCCTGCCCCGCGCCCAGCTCCTCACGCTCGGTGCCCGCGC CCCGCAGCGGCAGCGCAGAACGCACCGCCTCTGCCAGAGCCCGGGAAGCGCTCGGGCGAAGAGGAGGAGCCAAGGGTACCGAGCGGGTGG AGTCGGGAGCCGGAGAGCGGTGGAGGCGGATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCT ACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACA TAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAAC TTACCTTGTCAGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAG GGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTT CCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGA >In-frame_ENST00000570371_ENST00000299341_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=350AA_start in transcript=788_stop in transcript=1837 MTTTLKGRAHTSPPGSLGQRAAKEAQRRMTRCPASGRIKAWVSNSQAGDSGLPAPPARGEKPTWDPSGRPRHSRRLHTPATTRLYHLQPA AQPPRGSRRARCRCAGRPEAPPSRPCPAPSSSRSVPAPRSGSAERTASARAREALGRRGGAKGTERVESGAGERWRRISWARPSGATMAF GKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQALRQ -------------------------------------------------------------- >In-frame_ENST00000570371_ENST00000376352_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=6911nt_BP=1541nt TGAGTAAGGAAGTTGATAAACGGCAACATCTGAAATAGCTACTCGCCCTGAATAGGCAGGTGGAGAATATTAGTTACACGTGGGACAAAT CCCATTATGAGACATATCATCACAACAAGAATATTTCATTCTAGATTTTAGAATCCCAGGTTTTGGCTCACTTTGGTCAAGAAAAATTAT AAATAATTGAGTTACAGATAATTAAATGTTAGCCTCCTGGAGTGCATGGCAATTGGTTTTGACCTCTATATTAAAATTCACAAGACCACG GACATAAGTCAAAACAGGTCCCCTTCGTCTCCCTAGTCACCATCTCCAGGGCTAAAAAACAGACTTGAAATGGGTGGCAGTTAGACTACA GGAAACAGGATCTACAAGCACCAGGAGCTCATCTATGGCTATCTGACATCGCCTGGGGACACCTCACTCTCTGGCAGGCTCCTGCTGGCT GGAGATTGTTAACATCGCCAATCAGATGTTAATTGAATGCAAAGGAATAGGAAATAAATTCTGGTTCTGAAGGGGCAGCTGGAAAGGTGT TGGGCTTCTCAGATTCCAACCTACATTACAAAGCAGGCCTAAAGCCAAGCATACTCCTTGCCAGAAGAAACGGAAAGCCCCTCTCCCGTT TTTAGAATCAGGCTGGAAAACACGGCTCCCAGAAGGTGGGGTTAGAAAACAAGAGCTTGCGAGGCGGCGCCCTGTGGTCCCTCGAGGAAA TAGTAGAGAGACAAAGAGGGCCTGCTCCTGGGAAGCCCTAAATTCGAAGCCAATCCTTCCTCCTAGACATGACCACAACTTTAAAGGGCA GGGCGCACACCTCCCCTCCCGGATCTCTAGGACAAAGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGA TCAAAGCCTGGGTCTCTAATTCCCAGGCTGGAGATTCTGGGCTGCCTGCTCCTCCTGCACGGGGCGAAAAGCCCACCTGGGATCCGAGCG GGCGGCCGCGCCACTCTCGCAGGCTCCATACACCCGCCACTACCCGCCTGTACCACCTGCAGCCGGCAGCGCAGCCTCCTCGCGGGTCCC GCAGGGCGCGCTGCAGGTGCGCTGGGCGTCCCGAAGCCCCGCCCTCGCGTCCCTGCCCCGCGCCCAGCTCCTCACGCTCGGTGCCCGCGC CCCGCAGCGGCAGCGCAGAACGCACCGCCTCTGCCAGAGCCCGGGAAGCGCTCGGGCGAAGAGGAGGAGCCAAGGGTACCGAGCGGGTGG AGTCGGGAGCCGGAGAGCGGTGGAGGCGGATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCT ACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACA TAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAAC TTACCTTGTCAGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAG GGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTT CCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGA AAGAAGTAAATACACTTAAGGAAAAATTATTGGAATCAGATAAGCAAAGGAAACAATTGACAGAAGAGCTCCAGAATGTGAAACAAGAAG CCAAAGCTGTAGTTGAAGAAACAAGAGCCCTGCGTAGTCGGATTCATCTTGCTGAAGCTGCTCAGAGACAGGCACATGGAATGGAAATGG ACTATGAAGAAGTGATCCGTCTGTTAGAGGCCAAGATTACAGAGCTAAAGGCTCAGCTTGCTGATTATTCTGACCAAAATAAAGAAAGTG TTCAGGATTTAAAAAAGAGAATCATGGTACTCGACTGCCAATTACGAAAATCAGAAATGGCTCGAAAAACTTTTGAGGCATCCACTGAAA AGCTTCTTCATTTTGTAGAGGCTATTCAAGAAGTATTTTCTGATAATTCTACTCCTTTATCAAATTTAAGTGAAAGAAGAGCTGTGTTAG CTTCTCAGACTTCCCTCACACCACTGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCTG TTCGTGCCTTACTTGATATGGATTGTTTACCTTATGGGTGGGAGGAAGCTTACACAGCAGATGGAATCAAGTACTTCATCAATCATGTAA CACAGACTACATCCTGGATCCATCCCGTGATGAGTGTCCTGAATCTATCTCGCTCAGAGGAGAATGAAGAGGATTGCTCTAGAGAACTCC CCAACCAGAAAAGTTGATGGTTTTCCTTAGGAAGTGGAGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAA CAGTCTAAAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGTATTTTTGTAAAACTTTTGATAT TTCTGTATACATTTAAAAAATCAATTGCCACTACAGTAGTTCCTTAAGAATAATCTAGTTATATTTTTTGAAATCACATATAATTAGACT TTATAATATATATACTTTTTCATATATAATTAGATCTTTCTTTGTAATTTCATATGTAGTTCTTCATAGGGTCTCAGATACAATGGTTTT TATAATTGACATATTGAAAAAGTATATGAACATAATGAAACACCTCATTTATTTGATAATTCACTAATGTTTTATATTCATATATTAGGA AAGTGAACTTAGCAAGCTTTTTGGAATTTAAGGATCACATTTAGACATCTCATGGGCTGATGAATACAGCTGGTATCTTTGTGGAGCTTT CTAATTTACAAAATGCTTTGTAGACCCCATTGTCTTTAAACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGT TTTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTC CCCCTTCCCCCATACCCTGCTGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCAC AGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTTCGGTCAAACATGGCCCCTCTATAACCCCACTATTCTTCTCCTATAAACCCTTC CCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTTCTA AAGTGAAAGGCATGGTTTGTCCTGCTTAGGTTGCCCTTCCCAGAGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAA CATTACTGCTCTACTCGAAACAAGATGGAAGCCTAAAGCCCAAGTCGAGCAGCTCCCAGCACTGCTGTGCAGACCTAGAGGTCCTTAGAA CATAGTCTAAGAACCATTCATTGTAGCCATTTTATAGTTGAGTAAACTGAGATCTTAAGTCTCCTAGTCTACTGAATTTCATATGGTGTA TAATACAGATTTATATGGTAAAGATATACATATACATTGTGCTCAACTATACATTCCTGAATCCATTTAGGATTTGTGATTTATGTCTTG AGTAATAATATAAAGTCAACTCCAGACTGATAGGTAGTCATTAGCCATGAGAAATGTTTCAGGATGGCTAGGGAAGACTTGTGTTTTGCC TGACAGCCATTTGAATGTTAGGAAGCTTCGGGGAGACAAGTTTTGAGAGAAGCCCCAGAGGGAGCTATTTCCTTGCACCCCCCAGAGGTG AATGAGGTATTCTATAAGTTAGTGTCTATAATTGTGAAAGTACAAACTTCTTGTTTTTGTCAAATTAATGGTATGAAATTTCTCTCCCCC TGCTTGAAGAGTTTTCTAATTCGTTTCTAGTGAGCAAAACAAAGAAGGTGCTTGAGTCACTGAAATCAAAGTACTCAGGCACACAGCCCA CTGACAAGAGACACCTCATCCATTAACTGCTGTTTTGTACCACTTGCCGCCCTGTTTCTGTCAAATACCTAGTGAAAAAGGCCTAAACAA TTGTAATGATATTATTTATTGGGCATTTTGTGCCATACATGGTGATGAGCAGTTTGCATATATTTATTTATGATCTTCTTAAAACCATTC CATGAAATAGGAACTGTAATTATCCCCAATTCTAAAAGAAAAAACTTAGTTTTAGAGAGTTAGTAATCTTTGCCTAAGGGTCACAAAGCA CCTATGTGTAGAAGCTAGGGTTCAAGGCAGATCTGTGATTCCAGAAGCTGTTCTCTAAACCACTATGGAGAACTGCTTAGATTCATTGTC TATGGGTACATTTTATAAAAAGGCAGATTCTAGTTCAGTGTCATAAGGAACTTTCTAGTAATTAGAGCTGATAAGAAAAGAATTCCCCAG GAGAAAATGGAAACACTATCCCAGCAATCTGAATTCCTTACTTGGGGAATGTTGCTGAGGAGGTTCAGTGTGTGAATGGACTGAACCAGT TGGCCACTCTCTCAGATTCCCTCTTCATAAAGCTTCCGTGACTTCTAAACCATCAGGTCGGTGCCATAAGAGATGCTCAAAAAAGCATGG TCAGGGCTTAGCAAGAATCCTTTTCCAGTGCAAATACGACCCTCATATTATGTTTTGGCGAGTAGCCAGTCTTTCTTTAACATCAATCAA CCGTAGCAATGTGGTCATCACGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGTTCTTATGTCCTTCCGT CTCACTTTACTAGAGTGCCCAAGTTGACTCATCCTTACTCACTCATTCCCTCAAAATATTTATTGAGCACCAACAATGTCACAAGCACTG TGCTAAACACTGTGGTGAAGTAGAACAATTGCTAATCATTTCCTGGGTTCCACTTACTCTTGATTTAAAAAAAAAAAAACAACAAAAGAG TTTGTGTGTGGCCAGGACTAAACAGCTGCTTCTTAATTTTTGAATTTTAAAACTAATCTATTTTATTTAAAAAAAATCAAGTACTTTGGA AGTGAATAAAGTAAGAGATAGCCTGTCTCACTTTCCAGAGGTAGCAGTCACTAATACTGTGGTGAGTGATTTTACTCAAAGGAAATCACA CTATTAAGCAGCTTGGTTTTGACATGTTATGTTGTGGTCATCTTTTCATGTCAATACATAGATTAATCTTTTATTTCAAATGTCTACATA AAATATCACTACCCACATAACCTATAATTTGTGTGGCCAGCAATTTATTGAACACTAAAATGTTTTAAGTTTTCTTATTGCTAACAATGT CACAGTGAACATTTATATATTCATTAAATCCTTTTCCTCATGTATCTTTGCACTCTTGTGCTAGTATGTCTATAGTGTGAATACATTCAT AAATTTCTTGATCAAAGCTAGGTCAAAGTTACATTCATTTTAATTTTGGTACATATCCATAAATTCTCCATAAAAGTAGGACCAACTTAC ATTACCACCAATAGTGTATGTGAGCCTTATTTTTATGTATGATAGGACTTTTTTTAGTCCAAATGTTCCTATAGATTTTCTGGGTTTTTT TTTTTTTTTTGTCCTTGGAAGAATAACCTTCCTTCCACCAAGTCCAAGAACCTGAGATTTTTAATCATTAGGTTTTAGATTTCCTTTAGC AGCAGAGACTGACTTGCTGTATAGAGGGAAGTCAAGTAGTGACTAACTCACTATATGTCAAACACATCATTACTCTTCTCTTTTCCTACT TTACATGTAATGGTTGCGAGGACCAACTTTCAAATGAGCTAACTTGGGTGAGACGTTCACTAAAGTACCAAGCACAATACAAATGCATCT TCGAGTTCTTTGGGCCTCACTTTCCCTATCTGAATAATAAGGATAGTAATCCCTTGCCTTTTCTCAAACCAGTTCAACTCAGCAAACACT TCCTGAGCACCTGCTACATGCCAGGCAAAATGTGAAATTTGCATGCTATGAGGCTAAATGGTACTGATTCTCAAAACAAGGAGCTCATAG TCTAAAACCATTTTTCTTTCTTTTTTTTCCCCCTAAACAACCTCTTAAAGGGGTAAGAAGTTAGGGGGTTGTTTATTAAGAACCCCTGAA GAGCAACCCTTTACCACTCTCTTAAATTTGAAAAATTCCAAAATAATATTAACACCTCTTGACTAGAAAAGGAAAAAAAAGGAACATGCC GTATGAAGAGCCTCTCCAATAATAAATGCAAAGCAGCTGTCAAAATATAGAGTCAAGTGATACTTTCATAAAGTGTTTGCACAATTAGAA AATGTTATCCTTTTTCTCGGGAGAAATGGGACATTTTTATTTTCTCTGCTAAGTGAAATGCAACTTTTTGAAGAATCAACACGCTTGACA TTTTTACAATGTACATAAAGAACTGAACTATTATTAAAACAACTTACACACTCCATTGCTTATAACTTTTGAGAGAATGAAAAGAACCTT AAACAGAATGTGCCTGTGGAGCTTCGCTTTAGAAATGAAATACCCAAGGTGTTTTAACTACAACTGTCTACATGTAATAGTGTGTCTGCA >In-frame_ENST00000570371_ENST00000376352_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=582AA_start in transcript=788_stop in transcript=2536 MTTTLKGRAHTSPPGSLGQRAAKEAQRRMTRCPASGRIKAWVSNSQAGDSGLPAPPARGEKPTWDPSGRPRHSRRLHTPATTRLYHLQPA AQPPRGSRRARCRCAGRPEAPPSRPCPAPSSSRSVPAPRSGSAERTASARAREALGRRGGAKGTERVESGAGERWRRISWARPSGATMAF GKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQALRQ QVQADSKGTVSFGDFVQVARNLFCLQLDEVNVGAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEKLLESDKQRKQLTEE LQNVKQEAKAVVEETRALRSRIHLAEAAQRQAHGMEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEMARK TFEASTEKLLHFVEAIQEVFSDNSTPLSNLSERRAVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTADGI -------------------------------------------------------------- >In-frame_ENST00000570371_ENST00000405898_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=2985nt_BP=1541nt TGAGTAAGGAAGTTGATAAACGGCAACATCTGAAATAGCTACTCGCCCTGAATAGGCAGGTGGAGAATATTAGTTACACGTGGGACAAAT CCCATTATGAGACATATCATCACAACAAGAATATTTCATTCTAGATTTTAGAATCCCAGGTTTTGGCTCACTTTGGTCAAGAAAAATTAT AAATAATTGAGTTACAGATAATTAAATGTTAGCCTCCTGGAGTGCATGGCAATTGGTTTTGACCTCTATATTAAAATTCACAAGACCACG GACATAAGTCAAAACAGGTCCCCTTCGTCTCCCTAGTCACCATCTCCAGGGCTAAAAAACAGACTTGAAATGGGTGGCAGTTAGACTACA GGAAACAGGATCTACAAGCACCAGGAGCTCATCTATGGCTATCTGACATCGCCTGGGGACACCTCACTCTCTGGCAGGCTCCTGCTGGCT GGAGATTGTTAACATCGCCAATCAGATGTTAATTGAATGCAAAGGAATAGGAAATAAATTCTGGTTCTGAAGGGGCAGCTGGAAAGGTGT TGGGCTTCTCAGATTCCAACCTACATTACAAAGCAGGCCTAAAGCCAAGCATACTCCTTGCCAGAAGAAACGGAAAGCCCCTCTCCCGTT TTTAGAATCAGGCTGGAAAACACGGCTCCCAGAAGGTGGGGTTAGAAAACAAGAGCTTGCGAGGCGGCGCCCTGTGGTCCCTCGAGGAAA TAGTAGAGAGACAAAGAGGGCCTGCTCCTGGGAAGCCCTAAATTCGAAGCCAATCCTTCCTCCTAGACATGACCACAACTTTAAAGGGCA GGGCGCACACCTCCCCTCCCGGATCTCTAGGACAAAGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGA TCAAAGCCTGGGTCTCTAATTCCCAGGCTGGAGATTCTGGGCTGCCTGCTCCTCCTGCACGGGGCGAAAAGCCCACCTGGGATCCGAGCG GGCGGCCGCGCCACTCTCGCAGGCTCCATACACCCGCCACTACCCGCCTGTACCACCTGCAGCCGGCAGCGCAGCCTCCTCGCGGGTCCC GCAGGGCGCGCTGCAGGTGCGCTGGGCGTCCCGAAGCCCCGCCCTCGCGTCCCTGCCCCGCGCCCAGCTCCTCACGCTCGGTGCCCGCGC CCCGCAGCGGCAGCGCAGAACGCACCGCCTCTGCCAGAGCCCGGGAAGCGCTCGGGCGAAGAGGAGGAGCCAAGGGTACCGAGCGGGTGG AGTCGGGAGCCGGAGAGCGGTGGAGGCGGATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCT ACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACA TAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAAC TTACCTTGTCAGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAG GGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTT CCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGA AAGAAGTAAATACACTTAAGTGGCCAGGGCAGAATTAGATGAAGAGCCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTT GGGAAATACATTTTTTTTCATGTGCAGGGCTATTCTTAAGGGACATCATGTTTTGCTAACGTAATTTGGAATTAATATTATTTTAGAGAG GAAAAAAACACACATATCCCAAATATACTGTAACATTTTTCTTCTCTTTTTTTGTTTGTTTGGTTTTTTGATTCTTGTTTTTGTTTTGTG TTTTTGAGACAGGGTCGCACTCTGTCGCCCAGGCTGGAGTGCAATACTGCAATCACGTCTCACTGCAGCCTCAACCTCCTGGGTTCAAGT GATTCTCCCACCTCAACCTCCCAAGTAACTGGGACAACATGTCCATGCCACCATGCTCAACTAATTTTTTTTTAAATTTTTATTTTGTAG AGATGGTGTCTCACTATTTTGTTCAGACTGGTCTCAAACACCTGGGCTCAAATGACCCACCTACCTCAGCCTCTCAAAGTGCTGGGATTA CAGGTGTGAGCCACCATGTCTGGCCTTGATTCTCTTTATGTGGTTTCATTCTGTTTTTAGAAGAATATTACATTTAAATTATATCCTAAT TTTTATAGAAAGCTATATTTTCCAAATCTTTAGGAAAAGCAACATAACTACTTGATTTACCACTAATTCGTCATAGGCACATATTTTTAA AATTATTTTATTAAATAAGGTATAGTATATTGATAATTATTTAATTTTTATTAAATAGAAAATATTTACACCAAAAGGAAAGAAAATTTG TTTTGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATATATTATTTATCTTTTCATAGATTTTTCTCTACA CAGAAAATTATATTTTTTAAAAATAGGCAGGGCATGATGGCTGACACCTTTAATCGCAGTACTTTGGGAGGCTGAGGCAAGAGGATTACT TGAGCTCAGGAGTTTAACATCAGCCTGGGCAACATAGCAGGACCCCATCTCTACTATTTAAAACATAAAAACAAAAATAAATAAATATAT GTATATGTGGGGACAGGGAGTATGTGAGAAATTTCTGTACTTTCCCTTCAATTTTGCTATGAATCCAAAACTGCTTCAAAAAATAATAAA >In-frame_ENST00000570371_ENST00000405898_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=349AA_start in transcript=788_stop in transcript=1837 MTTTLKGRAHTSPPGSLGQRAAKEAQRRMTRCPASGRIKAWVSNSQAGDSGLPAPPARGEKPTWDPSGRPRHSRRLHTPATTRLYHLQPA AQPPRGSRRARCRCAGRPEAPPSRPCPAPSSSRSVPAPRSGSAERTASARAREALGRRGGAKGTERVESGAGERWRRISWARPSGATMAF GKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQALRQ -------------------------------------------------------------- >In-frame_ENST00000570371_ENST00000434978_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=3486nt_BP=1541nt TGAGTAAGGAAGTTGATAAACGGCAACATCTGAAATAGCTACTCGCCCTGAATAGGCAGGTGGAGAATATTAGTTACACGTGGGACAAAT CCCATTATGAGACATATCATCACAACAAGAATATTTCATTCTAGATTTTAGAATCCCAGGTTTTGGCTCACTTTGGTCAAGAAAAATTAT AAATAATTGAGTTACAGATAATTAAATGTTAGCCTCCTGGAGTGCATGGCAATTGGTTTTGACCTCTATATTAAAATTCACAAGACCACG GACATAAGTCAAAACAGGTCCCCTTCGTCTCCCTAGTCACCATCTCCAGGGCTAAAAAACAGACTTGAAATGGGTGGCAGTTAGACTACA GGAAACAGGATCTACAAGCACCAGGAGCTCATCTATGGCTATCTGACATCGCCTGGGGACACCTCACTCTCTGGCAGGCTCCTGCTGGCT GGAGATTGTTAACATCGCCAATCAGATGTTAATTGAATGCAAAGGAATAGGAAATAAATTCTGGTTCTGAAGGGGCAGCTGGAAAGGTGT TGGGCTTCTCAGATTCCAACCTACATTACAAAGCAGGCCTAAAGCCAAGCATACTCCTTGCCAGAAGAAACGGAAAGCCCCTCTCCCGTT TTTAGAATCAGGCTGGAAAACACGGCTCCCAGAAGGTGGGGTTAGAAAACAAGAGCTTGCGAGGCGGCGCCCTGTGGTCCCTCGAGGAAA TAGTAGAGAGACAAAGAGGGCCTGCTCCTGGGAAGCCCTAAATTCGAAGCCAATCCTTCCTCCTAGACATGACCACAACTTTAAAGGGCA GGGCGCACACCTCCCCTCCCGGATCTCTAGGACAAAGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGA TCAAAGCCTGGGTCTCTAATTCCCAGGCTGGAGATTCTGGGCTGCCTGCTCCTCCTGCACGGGGCGAAAAGCCCACCTGGGATCCGAGCG GGCGGCCGCGCCACTCTCGCAGGCTCCATACACCCGCCACTACCCGCCTGTACCACCTGCAGCCGGCAGCGCAGCCTCCTCGCGGGTCCC GCAGGGCGCGCTGCAGGTGCGCTGGGCGTCCCGAAGCCCCGCCCTCGCGTCCCTGCCCCGCGCCCAGCTCCTCACGCTCGGTGCCCGCGC CCCGCAGCGGCAGCGCAGAACGCACCGCCTCTGCCAGAGCCCGGGAAGCGCTCGGGCGAAGAGGAGGAGCCAAGGGTACCGAGCGGGTGG AGTCGGGAGCCGGAGAGCGGTGGAGGCGGATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCT ACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACA TAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAAC TTACCTTGTCAGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAG GGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTT CCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGA AAGAAGTAAATACACTTAAGGAAGCCAAAGCTGTAGTTGAAGAAACAAGAGCCCTGCGTAGTCGGATTCATCTTGCTGAAGCTGCTCAGA GACAGGCACATGGAATGGAAATGGACTATGAAGAAGTGATCCGTCTGTTAGAGGCCAAGATTACAGAGCTAAAGGCTCAGCTTGCTGATT ATTCTGACCAAAATAAAGAAAGTGTTCAGGATTTAAAAAAGAGAATCATGGTACTCGACTGCCAATTACGAAAATCAGAAATGGCTCGAA AAACTTTTGAGGCATCCACTGAAAAGCTTCTTCATTTTGTAGAGGCTATTCAAGAAGTATTTTCTGATAATTCTACTCCTTTATCAAATT TAAGTGAAAGAAGAGCTGTGTTAGCTTCTCAGACTTCCCTCACACCACTGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTG AATCTAAGGAACTTGTTAAATCTGTTCGTGCCTTACTTGATATGGATTGTTTACCTTATGGGTGGGAGGAAGCTTACACAGCAGATGGAA TCAAGTACTTCATCAATCATGTAACACAGACTACATCCTGGATCCATCCCGTGATGAGTGTCCTGAATCTATCTCGCTCAGAGGAGAATG AAGAGGATTGCTCTAGAGAACTCCCCAACCAGAAAAGTTGATGGTTTTCCTTAGGAAGTGGAGCTACATGGATGATGTGAGCAGAGACGC ATAACATCCAATTCTGAGATGAAACAGTCTAAAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGG GTATTTTTGTAAAACTTTTGATATTTCTGTATACATTTAAAAAATCAATTGCCACTACAGTAGTTCCTTAAGAATAATCTAGTTATATTT TTTGAAATCACATATAATTAGACTTTATAATATATATACTTTTTCATATATAATTAGATCTTTCTTTGTAATTTCATATGTAGTTCTTCA TAGGGTCTCAGATACAATGGTTTTTATAATTGACATATTGAAAAAGTATATGAACATAATGAAACACCTCATTTATTTGATAATTCACTA ATGTTTTATATTCATATATTAGGAAAGTGAACTTAGCAAGCTTTTTGGAATTTAAGGATCACATTTAGACATCTCATGGGCTGATGAATA CAGCTGGTATCTTTGTGGAGCTTTCTAATTTACAAAATGCTTTGTAGACCCCATTGTCTTTAAACCATACAACATGCCCGTGAAGCTGAT CTGGTGGGTATGTTTATTCTTGGTTTTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCTA AGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGA TTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTTCGGTCAAACATGGCCCCTCTATAACCCCA CTATTCTTCTCCTATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTT >In-frame_ENST00000570371_ENST00000434978_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=560AA_start in transcript=788_stop in transcript=2470 MTTTLKGRAHTSPPGSLGQRAAKEAQRRMTRCPASGRIKAWVSNSQAGDSGLPAPPARGEKPTWDPSGRPRHSRRLHTPATTRLYHLQPA AQPPRGSRRARCRCAGRPEAPPSRPCPAPSSSRSVPAPRSGSAERTASARAREALGRRGGAKGTERVESGAGERWRRISWARPSGATMAF GKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQALRQ QVQADSKGTVSFGDFVQVARNLFCLQLDEVNVGAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEAKAVVEETRALRSRI HLAEAAQRQAHGMEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEMARKTFEASTEKLLHFVEAIQEVFSD NSTPLSNLSERRAVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMSVLN -------------------------------------------------------------- >In-frame_ENST00000570371_ENST00000398391_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=2985nt_BP=1541nt TGAGTAAGGAAGTTGATAAACGGCAACATCTGAAATAGCTACTCGCCCTGAATAGGCAGGTGGAGAATATTAGTTACACGTGGGACAAAT CCCATTATGAGACATATCATCACAACAAGAATATTTCATTCTAGATTTTAGAATCCCAGGTTTTGGCTCACTTTGGTCAAGAAAAATTAT AAATAATTGAGTTACAGATAATTAAATGTTAGCCTCCTGGAGTGCATGGCAATTGGTTTTGACCTCTATATTAAAATTCACAAGACCACG GACATAAGTCAAAACAGGTCCCCTTCGTCTCCCTAGTCACCATCTCCAGGGCTAAAAAACAGACTTGAAATGGGTGGCAGTTAGACTACA GGAAACAGGATCTACAAGCACCAGGAGCTCATCTATGGCTATCTGACATCGCCTGGGGACACCTCACTCTCTGGCAGGCTCCTGCTGGCT GGAGATTGTTAACATCGCCAATCAGATGTTAATTGAATGCAAAGGAATAGGAAATAAATTCTGGTTCTGAAGGGGCAGCTGGAAAGGTGT TGGGCTTCTCAGATTCCAACCTACATTACAAAGCAGGCCTAAAGCCAAGCATACTCCTTGCCAGAAGAAACGGAAAGCCCCTCTCCCGTT TTTAGAATCAGGCTGGAAAACACGGCTCCCAGAAGGTGGGGTTAGAAAACAAGAGCTTGCGAGGCGGCGCCCTGTGGTCCCTCGAGGAAA TAGTAGAGAGACAAAGAGGGCCTGCTCCTGGGAAGCCCTAAATTCGAAGCCAATCCTTCCTCCTAGACATGACCACAACTTTAAAGGGCA GGGCGCACACCTCCCCTCCCGGATCTCTAGGACAAAGGGCAGCCAAAGAGGCGCAGAGAAGAATGACAAGGTGCCCAGCAAGCGGCAGGA TCAAAGCCTGGGTCTCTAATTCCCAGGCTGGAGATTCTGGGCTGCCTGCTCCTCCTGCACGGGGCGAAAAGCCCACCTGGGATCCGAGCG GGCGGCCGCGCCACTCTCGCAGGCTCCATACACCCGCCACTACCCGCCTGTACCACCTGCAGCCGGCAGCGCAGCCTCCTCGCGGGTCCC GCAGGGCGCGCTGCAGGTGCGCTGGGCGTCCCGAAGCCCCGCCCTCGCGTCCCTGCCCCGCGCCCAGCTCCTCACGCTCGGTGCCCGCGC CCCGCAGCGGCAGCGCAGAACGCACCGCCTCTGCCAGAGCCCGGGAAGCGCTCGGGCGAAGAGGAGGAGCCAAGGGTACCGAGCGGGTGG AGTCGGGAGCCGGAGAGCGGTGGAGGCGGATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCT ACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACA TAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAAC TTACCTTGTCAGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAG GGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTT CCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGA AAGAAGTAAATACACTTAAGTGGCCAGGGCAGAATTAGATGAAGAGCCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTT GGGAAATACATTTTTTTTCATGTGCAGGGCTATTCTTAAGGGACATCATGTTTTGCTAACGTAATTTGGAATTAATATTATTTTAGAGAG GAAAAAAACACACATATCCCAAATATACTGTAACATTTTTCTTCTCTTTTTTTGTTTGTTTGGTTTTTTGATTCTTGTTTTTGTTTTGTG TTTTTGAGACAGGGTCGCACTCTGTCGCCCAGGCTGGAGTGCAATACTGCAATCACGTCTCACTGCAGCCTCAACCTCCTGGGTTCAAGT GATTCTCCCACCTCAACCTCCCAAGTAACTGGGACAACATGTCCATGCCACCATGCTCAACTAATTTTTTTTTAAATTTTTATTTTGTAG AGATGGTGTCTCACTATTTTGTTCAGACTGGTCTCAAACACCTGGGCTCAAATGACCCACCTACCTCAGCCTCTCAAAGTGCTGGGATTA CAGGTGTGAGCCACCATGTCTGGCCTTGATTCTCTTTATGTGGTTTCATTCTGTTTTTAGAAGAATATTACATTTAAATTATATCCTAAT TTTTATAGAAAGCTATATTTTCCAAATCTTTAGGAAAAGCAACATAACTACTTGATTTACCACTAATTCGTCATAGGCACATATTTTTAA AATTATTTTATTAAATAAGGTATAGTATATTGATAATTATTTAATTTTTATTAAATAGAAAATATTTACACCAAAAGGAAAGAAAATTTG TTTTGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATATATTATTTATCTTTTCATAGATTTTTCTCTACA CAGAAAATTATATTTTTTAAAAATAGGCAGGGCATGATGGCTGACACCTTTAATCGCAGTACTTTGGGAGGCTGAGGCAAGAGGATTACT TGAGCTCAGGAGTTTAACATCAGCCTGGGCAACATAGCAGGACCCCATCTCTACTATTTAAAACATAAAAACAAAAATAAATAAATATAT GTATATGTGGGGACAGGGAGTATGTGAGAAATTTCTGTACTTTCCCTTCAATTTTGCTATGAATCCAAAACTGCTTCAAAAAATAATAAA >In-frame_ENST00000570371_ENST00000398391_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=349AA_start in transcript=788_stop in transcript=1837 MTTTLKGRAHTSPPGSLGQRAAKEAQRRMTRCPASGRIKAWVSNSQAGDSGLPAPPARGEKPTWDPSGRPRHSRRLHTPATTRLYHLQPA AQPPRGSRRARCRCAGRPEAPPSRPCPAPSSSRSVPAPRSGSAERTASARAREALGRRGGAKGTERVESGAGERWRRISWARPSGATMAF GKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQALRQ -------------------------------------------------------------- >In-frame_ENST00000575882_ENST00000299341_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=872nt_BP=575nt AAAAGCCCACCTGGGATCCGAGCGGGCGGCCGCGCCACTCTCGCAGGCTCCATACACCCGCCACTACCCGCCTGTACCACCTGCAGCCGG CAGCGCAGCCTCCTCGCGGGTCCCGCAGGGCGCGCTGCAGGTGCGCTGGGCGTCCCGAAGCCCCGCCCTCGCGTCCCTGCCCCGCGCCCA GCTCCTCACGCTCGGTGCCCGCGCCCCGCAGCGGCAGCGCAGAACGCACCGCCTCTGCCAGAGCCCGGGAAGCGCTCGGGCGAAGAGGAG GAGCCAAGGGTACCGAGCGGGTGGAGTCGGGAGCCGGAGAGCGGTGGAGGCGGATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGT TTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGG GCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAA ACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGAC AGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAG TAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCA >In-frame_ENST00000575882_ENST00000299341_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=267AA_start in transcript=71_stop in transcript=871 MYHLQPAAQPPRGSRRARCRCAGRPEAPPSRPCPAPSSSRSVPAPRSGSAERTASARAREALGRRGGAKGTERVESGAGERWRRISWARP SGATMAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKE -------------------------------------------------------------- >In-frame_ENST00000575882_ENST00000376352_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=5945nt_BP=575nt AAAAGCCCACCTGGGATCCGAGCGGGCGGCCGCGCCACTCTCGCAGGCTCCATACACCCGCCACTACCCGCCTGTACCACCTGCAGCCGG CAGCGCAGCCTCCTCGCGGGTCCCGCAGGGCGCGCTGCAGGTGCGCTGGGCGTCCCGAAGCCCCGCCCTCGCGTCCCTGCCCCGCGCCCA GCTCCTCACGCTCGGTGCCCGCGCCCCGCAGCGGCAGCGCAGAACGCACCGCCTCTGCCAGAGCCCGGGAAGCGCTCGGGCGAAGAGGAG GAGCCAAGGGTACCGAGCGGGTGGAGTCGGGAGCCGGAGAGCGGTGGAGGCGGATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGT TTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGG GCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAA ACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGAC AGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAG TAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCA AGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGGAAAAATTATTGGAATCAGATAAGCAAAGGAAACAATTGACAGAAG AGCTCCAGAATGTGAAACAAGAAGCCAAAGCTGTAGTTGAAGAAACAAGAGCCCTGCGTAGTCGGATTCATCTTGCTGAAGCTGCTCAGA GACAGGCACATGGAATGGAAATGGACTATGAAGAAGTGATCCGTCTGTTAGAGGCCAAGATTACAGAGCTAAAGGCTCAGCTTGCTGATT ATTCTGACCAAAATAAAGAAAGTGTTCAGGATTTAAAAAAGAGAATCATGGTACTCGACTGCCAATTACGAAAATCAGAAATGGCTCGAA AAACTTTTGAGGCATCCACTGAAAAGCTTCTTCATTTTGTAGAGGCTATTCAAGAAGTATTTTCTGATAATTCTACTCCTTTATCAAATT TAAGTGAAAGAAGAGCTGTGTTAGCTTCTCAGACTTCCCTCACACCACTGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTG AATCTAAGGAACTTGTTAAATCTGTTCGTGCCTTACTTGATATGGATTGTTTACCTTATGGGTGGGAGGAAGCTTACACAGCAGATGGAA TCAAGTACTTCATCAATCATGTAACACAGACTACATCCTGGATCCATCCCGTGATGAGTGTCCTGAATCTATCTCGCTCAGAGGAGAATG AAGAGGATTGCTCTAGAGAACTCCCCAACCAGAAAAGTTGATGGTTTTCCTTAGGAAGTGGAGCTACATGGATGATGTGAGCAGAGACGC ATAACATCCAATTCTGAGATGAAACAGTCTAAAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGG GTATTTTTGTAAAACTTTTGATATTTCTGTATACATTTAAAAAATCAATTGCCACTACAGTAGTTCCTTAAGAATAATCTAGTTATATTT TTTGAAATCACATATAATTAGACTTTATAATATATATACTTTTTCATATATAATTAGATCTTTCTTTGTAATTTCATATGTAGTTCTTCA TAGGGTCTCAGATACAATGGTTTTTATAATTGACATATTGAAAAAGTATATGAACATAATGAAACACCTCATTTATTTGATAATTCACTA ATGTTTTATATTCATATATTAGGAAAGTGAACTTAGCAAGCTTTTTGGAATTTAAGGATCACATTTAGACATCTCATGGGCTGATGAATA CAGCTGGTATCTTTGTGGAGCTTTCTAATTTACAAAATGCTTTGTAGACCCCATTGTCTTTAAACCATACAACATGCCCGTGAAGCTGAT CTGGTGGGTATGTTTATTCTTGGTTTTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCTA AGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGA TTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTTCGGTCAAACATGGCCCCTCTATAACCCCA CTATTCTTCTCCTATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTT CTTTCAGCAGCTCGTGTTTTTCTAAAGTGAAAGGCATGGTTTGTCCTGCTTAGGTTGCCCTTCCCAGAGGGATGGTTTGAGGGGAGCTGA TGAGAAGAGAGGTATCTGTTAAAACATTACTGCTCTACTCGAAACAAGATGGAAGCCTAAAGCCCAAGTCGAGCAGCTCCCAGCACTGCT GTGCAGACCTAGAGGTCCTTAGAACATAGTCTAAGAACCATTCATTGTAGCCATTTTATAGTTGAGTAAACTGAGATCTTAAGTCTCCTA GTCTACTGAATTTCATATGGTGTATAATACAGATTTATATGGTAAAGATATACATATACATTGTGCTCAACTATACATTCCTGAATCCAT TTAGGATTTGTGATTTATGTCTTGAGTAATAATATAAAGTCAACTCCAGACTGATAGGTAGTCATTAGCCATGAGAAATGTTTCAGGATG GCTAGGGAAGACTTGTGTTTTGCCTGACAGCCATTTGAATGTTAGGAAGCTTCGGGGAGACAAGTTTTGAGAGAAGCCCCAGAGGGAGCT ATTTCCTTGCACCCCCCAGAGGTGAATGAGGTATTCTATAAGTTAGTGTCTATAATTGTGAAAGTACAAACTTCTTGTTTTTGTCAAATT AATGGTATGAAATTTCTCTCCCCCTGCTTGAAGAGTTTTCTAATTCGTTTCTAGTGAGCAAAACAAAGAAGGTGCTTGAGTCACTGAAAT CAAAGTACTCAGGCACACAGCCCACTGACAAGAGACACCTCATCCATTAACTGCTGTTTTGTACCACTTGCCGCCCTGTTTCTGTCAAAT ACCTAGTGAAAAAGGCCTAAACAATTGTAATGATATTATTTATTGGGCATTTTGTGCCATACATGGTGATGAGCAGTTTGCATATATTTA TTTATGATCTTCTTAAAACCATTCCATGAAATAGGAACTGTAATTATCCCCAATTCTAAAAGAAAAAACTTAGTTTTAGAGAGTTAGTAA TCTTTGCCTAAGGGTCACAAAGCACCTATGTGTAGAAGCTAGGGTTCAAGGCAGATCTGTGATTCCAGAAGCTGTTCTCTAAACCACTAT GGAGAACTGCTTAGATTCATTGTCTATGGGTACATTTTATAAAAAGGCAGATTCTAGTTCAGTGTCATAAGGAACTTTCTAGTAATTAGA GCTGATAAGAAAAGAATTCCCCAGGAGAAAATGGAAACACTATCCCAGCAATCTGAATTCCTTACTTGGGGAATGTTGCTGAGGAGGTTC AGTGTGTGAATGGACTGAACCAGTTGGCCACTCTCTCAGATTCCCTCTTCATAAAGCTTCCGTGACTTCTAAACCATCAGGTCGGTGCCA TAAGAGATGCTCAAAAAAGCATGGTCAGGGCTTAGCAAGAATCCTTTTCCAGTGCAAATACGACCCTCATATTATGTTTTGGCGAGTAGC CAGTCTTTCTTTAACATCAATCAACCGTAGCAATGTGGTCATCACGAAGTCTTCATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAAT CTGAATGTTCTTATGTCCTTCCGTCTCACTTTACTAGAGTGCCCAAGTTGACTCATCCTTACTCACTCATTCCCTCAAAATATTTATTGA GCACCAACAATGTCACAAGCACTGTGCTAAACACTGTGGTGAAGTAGAACAATTGCTAATCATTTCCTGGGTTCCACTTACTCTTGATTT AAAAAAAAAAAAACAACAAAAGAGTTTGTGTGTGGCCAGGACTAAACAGCTGCTTCTTAATTTTTGAATTTTAAAACTAATCTATTTTAT TTAAAAAAAATCAAGTACTTTGGAAGTGAATAAAGTAAGAGATAGCCTGTCTCACTTTCCAGAGGTAGCAGTCACTAATACTGTGGTGAG TGATTTTACTCAAAGGAAATCACACTATTAAGCAGCTTGGTTTTGACATGTTATGTTGTGGTCATCTTTTCATGTCAATACATAGATTAA TCTTTTATTTCAAATGTCTACATAAAATATCACTACCCACATAACCTATAATTTGTGTGGCCAGCAATTTATTGAACACTAAAATGTTTT AAGTTTTCTTATTGCTAACAATGTCACAGTGAACATTTATATATTCATTAAATCCTTTTCCTCATGTATCTTTGCACTCTTGTGCTAGTA TGTCTATAGTGTGAATACATTCATAAATTTCTTGATCAAAGCTAGGTCAAAGTTACATTCATTTTAATTTTGGTACATATCCATAAATTC TCCATAAAAGTAGGACCAACTTACATTACCACCAATAGTGTATGTGAGCCTTATTTTTATGTATGATAGGACTTTTTTTAGTCCAAATGT TCCTATAGATTTTCTGGGTTTTTTTTTTTTTTTTGTCCTTGGAAGAATAACCTTCCTTCCACCAAGTCCAAGAACCTGAGATTTTTAATC ATTAGGTTTTAGATTTCCTTTAGCAGCAGAGACTGACTTGCTGTATAGAGGGAAGTCAAGTAGTGACTAACTCACTATATGTCAAACACA TCATTACTCTTCTCTTTTCCTACTTTACATGTAATGGTTGCGAGGACCAACTTTCAAATGAGCTAACTTGGGTGAGACGTTCACTAAAGT ACCAAGCACAATACAAATGCATCTTCGAGTTCTTTGGGCCTCACTTTCCCTATCTGAATAATAAGGATAGTAATCCCTTGCCTTTTCTCA AACCAGTTCAACTCAGCAAACACTTCCTGAGCACCTGCTACATGCCAGGCAAAATGTGAAATTTGCATGCTATGAGGCTAAATGGTACTG ATTCTCAAAACAAGGAGCTCATAGTCTAAAACCATTTTTCTTTCTTTTTTTTCCCCCTAAACAACCTCTTAAAGGGGTAAGAAGTTAGGG GGTTGTTTATTAAGAACCCCTGAAGAGCAACCCTTTACCACTCTCTTAAATTTGAAAAATTCCAAAATAATATTAACACCTCTTGACTAG AAAAGGAAAAAAAAGGAACATGCCGTATGAAGAGCCTCTCCAATAATAAATGCAAAGCAGCTGTCAAAATATAGAGTCAAGTGATACTTT CATAAAGTGTTTGCACAATTAGAAAATGTTATCCTTTTTCTCGGGAGAAATGGGACATTTTTATTTTCTCTGCTAAGTGAAATGCAACTT TTTGAAGAATCAACACGCTTGACATTTTTACAATGTACATAAAGAACTGAACTATTATTAAAACAACTTACACACTCCATTGCTTATAAC TTTTGAGAGAATGAAAAGAACCTTAAACAGAATGTGCCTGTGGAGCTTCGCTTTAGAAATGAAATACCCAAGGTGTTTTAACTACAACTG TCTACATGTAATAGTGTGTCTGCATAATGACTTTGTAAATATTAACTGCAATTCTGTATTTGCTTTCTTGATATGACTTTTAACATTTAA >In-frame_ENST00000575882_ENST00000376352_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=499AA_start in transcript=71_stop in transcript=1570 MYHLQPAAQPPRGSRRARCRCAGRPEAPPSRPCPAPSSSRSVPAPRSGSAERTASARAREALGRRGGAKGTERVESGAGERWRRISWARP SGATMAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKE QHQALRQQVQADSKGTVSFGDFVQVARNLFCLQLDEVNVGAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEKLLESDKQ RKQLTEELQNVKQEAKAVVEETRALRSRIHLAEAAQRQAHGMEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLR KSEMARKTFEASTEKLLHFVEAIQEVFSDNSTPLSNLSERRAVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEE -------------------------------------------------------------- >In-frame_ENST00000575882_ENST00000405898_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=2019nt_BP=575nt AAAAGCCCACCTGGGATCCGAGCGGGCGGCCGCGCCACTCTCGCAGGCTCCATACACCCGCCACTACCCGCCTGTACCACCTGCAGCCGG CAGCGCAGCCTCCTCGCGGGTCCCGCAGGGCGCGCTGCAGGTGCGCTGGGCGTCCCGAAGCCCCGCCCTCGCGTCCCTGCCCCGCGCCCA GCTCCTCACGCTCGGTGCCCGCGCCCCGCAGCGGCAGCGCAGAACGCACCGCCTCTGCCAGAGCCCGGGAAGCGCTCGGGCGAAGAGGAG GAGCCAAGGGTACCGAGCGGGTGGAGTCGGGAGCCGGAGAGCGGTGGAGGCGGATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGT TTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGG GCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAA ACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGAC AGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAG TAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCA AGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGTGGCCAGGGCAGAATTAGATGAAGAGCCAATAAAGCAAGTCGTGGC AATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTTTTTCATGTGCAGGGCTATTCTTAAGGGACATCATGTTTTGCTAACGTAATT TGGAATTAATATTATTTTAGAGAGGAAAAAAACACACATATCCCAAATATACTGTAACATTTTTCTTCTCTTTTTTTGTTTGTTTGGTTT TTTGATTCTTGTTTTTGTTTTGTGTTTTTGAGACAGGGTCGCACTCTGTCGCCCAGGCTGGAGTGCAATACTGCAATCACGTCTCACTGC AGCCTCAACCTCCTGGGTTCAAGTGATTCTCCCACCTCAACCTCCCAAGTAACTGGGACAACATGTCCATGCCACCATGCTCAACTAATT TTTTTTTAAATTTTTATTTTGTAGAGATGGTGTCTCACTATTTTGTTCAGACTGGTCTCAAACACCTGGGCTCAAATGACCCACCTACCT CAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGTCTGGCCTTGATTCTCTTTATGTGGTTTCATTCTGTTTTTAGAAGAAT ATTACATTTAAATTATATCCTAATTTTTATAGAAAGCTATATTTTCCAAATCTTTAGGAAAAGCAACATAACTACTTGATTTACCACTAA TTCGTCATAGGCACATATTTTTAAAATTATTTTATTAAATAAGGTATAGTATATTGATAATTATTTAATTTTTATTAAATAGAAAATATT TACACCAAAAGGAAAGAAAATTTGTTTTGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATATATTATTTA TCTTTTCATAGATTTTTCTCTACACAGAAAATTATATTTTTTAAAAATAGGCAGGGCATGATGGCTGACACCTTTAATCGCAGTACTTTG GGAGGCTGAGGCAAGAGGATTACTTGAGCTCAGGAGTTTAACATCAGCCTGGGCAACATAGCAGGACCCCATCTCTACTATTTAAAACAT AAAAACAAAAATAAATAAATATATGTATATGTGGGGACAGGGAGTATGTGAGAAATTTCTGTACTTTCCCTTCAATTTTGCTATGAATCC >In-frame_ENST00000575882_ENST00000405898_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=266AA_start in transcript=71_stop in transcript=871 MYHLQPAAQPPRGSRRARCRCAGRPEAPPSRPCPAPSSSRSVPAPRSGSAERTASARAREALGRRGGAKGTERVESGAGERWRRISWARP SGATMAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKE -------------------------------------------------------------- >In-frame_ENST00000575882_ENST00000434978_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=2520nt_BP=575nt AAAAGCCCACCTGGGATCCGAGCGGGCGGCCGCGCCACTCTCGCAGGCTCCATACACCCGCCACTACCCGCCTGTACCACCTGCAGCCGG CAGCGCAGCCTCCTCGCGGGTCCCGCAGGGCGCGCTGCAGGTGCGCTGGGCGTCCCGAAGCCCCGCCCTCGCGTCCCTGCCCCGCGCCCA GCTCCTCACGCTCGGTGCCCGCGCCCCGCAGCGGCAGCGCAGAACGCACCGCCTCTGCCAGAGCCCGGGAAGCGCTCGGGCGAAGAGGAG GAGCCAAGGGTACCGAGCGGGTGGAGTCGGGAGCCGGAGAGCGGTGGAGGCGGATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGT TTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGG GCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAA ACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGAC AGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAG TAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCA AGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGGAAGCCAAAGCTGTAGTTGAAGAAACAAGAGCCCTGCGTAGTCGGA TTCATCTTGCTGAAGCTGCTCAGAGACAGGCACATGGAATGGAAATGGACTATGAAGAAGTGATCCGTCTGTTAGAGGCCAAGATTACAG AGCTAAAGGCTCAGCTTGCTGATTATTCTGACCAAAATAAAGAAAGTGTTCAGGATTTAAAAAAGAGAATCATGGTACTCGACTGCCAAT TACGAAAATCAGAAATGGCTCGAAAAACTTTTGAGGCATCCACTGAAAAGCTTCTTCATTTTGTAGAGGCTATTCAAGAAGTATTTTCTG ATAATTCTACTCCTTTATCAAATTTAAGTGAAAGAAGAGCTGTGTTAGCTTCTCAGACTTCCCTCACACCACTGGGAAGGAATGGACGTA GCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCTGTTCGTGCCTTACTTGATATGGATTGTTTACCTTATGGGTGGG AGGAAGCTTACACAGCAGATGGAATCAAGTACTTCATCAATCATGTAACACAGACTACATCCTGGATCCATCCCGTGATGAGTGTCCTGA ATCTATCTCGCTCAGAGGAGAATGAAGAGGATTGCTCTAGAGAACTCCCCAACCAGAAAAGTTGATGGTTTTCCTTAGGAAGTGGAGCTA CATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACAGTCTAAAATAGGAGTAAAGCATGCACTACTTGTTGAAGTG TGAAATGGAGACTCTGGACTTTGGGTATTTTTGTAAAACTTTTGATATTTCTGTATACATTTAAAAAATCAATTGCCACTACAGTAGTTC CTTAAGAATAATCTAGTTATATTTTTTGAAATCACATATAATTAGACTTTATAATATATATACTTTTTCATATATAATTAGATCTTTCTT TGTAATTTCATATGTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTTATAATTGACATATTGAAAAAGTATATGAACATAATGAAACA CCTCATTTATTTGATAATTCACTAATGTTTTATATTCATATATTAGGAAAGTGAACTTAGCAAGCTTTTTGGAATTTAAGGATCACATTT AGACATCTCATGGGCTGATGAATACAGCTGGTATCTTTGTGGAGCTTTCTAATTTACAAAATGCTTTGTAGACCCCATTGTCTTTAAACC ATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTG TCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTCCACGGAGGGAGGTCAC AGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTTCGGTC AAACATGGCCCCTCTATAACCCCACTATTCTTCTCCTATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCT TTGTGATATTGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTTCTAAAGTGAAAGGCATGGTTTGTCCTGCTTAGGTTGCCCTTCCCA >In-frame_ENST00000575882_ENST00000434978_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=477AA_start in transcript=71_stop in transcript=1504 MYHLQPAAQPPRGSRRARCRCAGRPEAPPSRPCPAPSSSRSVPAPRSGSAERTASARAREALGRRGGAKGTERVESGAGERWRRISWARP SGATMAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKE QHQALRQQVQADSKGTVSFGDFVQVARNLFCLQLDEVNVGAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEAKAVVEET RALRSRIHLAEAAQRQAHGMEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEMARKTFEASTEKLLHFVEA IQEVFSDNSTPLSNLSERRAVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTADGIKYFINHVTQTTSWIH -------------------------------------------------------------- >In-frame_ENST00000575882_ENST00000398391_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=2019nt_BP=575nt AAAAGCCCACCTGGGATCCGAGCGGGCGGCCGCGCCACTCTCGCAGGCTCCATACACCCGCCACTACCCGCCTGTACCACCTGCAGCCGG CAGCGCAGCCTCCTCGCGGGTCCCGCAGGGCGCGCTGCAGGTGCGCTGGGCGTCCCGAAGCCCCGCCCTCGCGTCCCTGCCCCGCGCCCA GCTCCTCACGCTCGGTGCCCGCGCCCCGCAGCGGCAGCGCAGAACGCACCGCCTCTGCCAGAGCCCGGGAAGCGCTCGGGCGAAGAGGAG GAGCCAAGGGTACCGAGCGGGTGGAGTCGGGAGCCGGAGAGCGGTGGAGGCGGATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGT TTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGG GCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAA ACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGAC AGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAG TAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCA AGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGTGGCCAGGGCAGAATTAGATGAAGAGCCAATAAAGCAAGTCGTGGC AATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTTTTTCATGTGCAGGGCTATTCTTAAGGGACATCATGTTTTGCTAACGTAATT TGGAATTAATATTATTTTAGAGAGGAAAAAAACACACATATCCCAAATATACTGTAACATTTTTCTTCTCTTTTTTTGTTTGTTTGGTTT TTTGATTCTTGTTTTTGTTTTGTGTTTTTGAGACAGGGTCGCACTCTGTCGCCCAGGCTGGAGTGCAATACTGCAATCACGTCTCACTGC AGCCTCAACCTCCTGGGTTCAAGTGATTCTCCCACCTCAACCTCCCAAGTAACTGGGACAACATGTCCATGCCACCATGCTCAACTAATT TTTTTTTAAATTTTTATTTTGTAGAGATGGTGTCTCACTATTTTGTTCAGACTGGTCTCAAACACCTGGGCTCAAATGACCCACCTACCT CAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGTCTGGCCTTGATTCTCTTTATGTGGTTTCATTCTGTTTTTAGAAGAAT ATTACATTTAAATTATATCCTAATTTTTATAGAAAGCTATATTTTCCAAATCTTTAGGAAAAGCAACATAACTACTTGATTTACCACTAA TTCGTCATAGGCACATATTTTTAAAATTATTTTATTAAATAAGGTATAGTATATTGATAATTATTTAATTTTTATTAAATAGAAAATATT TACACCAAAAGGAAAGAAAATTTGTTTTGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTTGCAAATATATTATTTA TCTTTTCATAGATTTTTCTCTACACAGAAAATTATATTTTTTAAAAATAGGCAGGGCATGATGGCTGACACCTTTAATCGCAGTACTTTG GGAGGCTGAGGCAAGAGGATTACTTGAGCTCAGGAGTTTAACATCAGCCTGGGCAACATAGCAGGACCCCATCTCTACTATTTAAAACAT AAAAACAAAAATAAATAAATATATGTATATGTGGGGACAGGGAGTATGTGAGAAATTTCTGTACTTTCCCTTCAATTTTGCTATGAATCC >In-frame_ENST00000575882_ENST00000398391_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=266AA_start in transcript=71_stop in transcript=871 MYHLQPAAQPPRGSRRARCRCAGRPEAPPSRPCPAPSSSRSVPAPRSGSAERTASARAREALGRRGGAKGTERVESGAGERWRRISWARP SGATMAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKE -------------------------------------------------------------- >In-frame_ENST00000445275_ENST00000299341_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=633nt_BP=336nt AGAGCCCGGGAAGCGCTCGGGCGAAGAGGAGGAGCCAAGGGTACCGAGCGGGTGGAGTCGGGAGCCGGAGAGCGGTGGAGGCGGATTTCC TGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCT ACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGCA GTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATTCAG CCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCC AGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGAT TCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGTGGCCAGGGCAGAAT >In-frame_ENST00000445275_ENST00000299341_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=172AA_start in transcript=114_stop in transcript=632 MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQA -------------------------------------------------------------- >In-frame_ENST00000445275_ENST00000376352_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=5706nt_BP=336nt AGAGCCCGGGAAGCGCTCGGGCGAAGAGGAGGAGCCAAGGGTACCGAGCGGGTGGAGTCGGGAGCCGGAGAGCGGTGGAGGCGGATTTCC TGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCT ACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGCA GTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATTCAG CCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCC AGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGAT TCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGGAAAAATTATTGGAA TCAGATAAGCAAAGGAAACAATTGACAGAAGAGCTCCAGAATGTGAAACAAGAAGCCAAAGCTGTAGTTGAAGAAACAAGAGCCCTGCGT AGTCGGATTCATCTTGCTGAAGCTGCTCAGAGACAGGCACATGGAATGGAAATGGACTATGAAGAAGTGATCCGTCTGTTAGAGGCCAAG ATTACAGAGCTAAAGGCTCAGCTTGCTGATTATTCTGACCAAAATAAAGAAAGTGTTCAGGATTTAAAAAAGAGAATCATGGTACTCGAC TGCCAATTACGAAAATCAGAAATGGCTCGAAAAACTTTTGAGGCATCCACTGAAAAGCTTCTTCATTTTGTAGAGGCTATTCAAGAAGTA TTTTCTGATAATTCTACTCCTTTATCAAATTTAAGTGAAAGAAGAGCTGTGTTAGCTTCTCAGACTTCCCTCACACCACTGGGAAGGAAT GGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCTGTTCGTGCCTTACTTGATATGGATTGTTTACCTTAT GGGTGGGAGGAAGCTTACACAGCAGATGGAATCAAGTACTTCATCAATCATGTAACACAGACTACATCCTGGATCCATCCCGTGATGAGT GTCCTGAATCTATCTCGCTCAGAGGAGAATGAAGAGGATTGCTCTAGAGAACTCCCCAACCAGAAAAGTTGATGGTTTTCCTTAGGAAGT GGAGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACAGTCTAAAATAGGAGTAAAGCATGCACTACTTGT TGAAGTGTGAAATGGAGACTCTGGACTTTGGGTATTTTTGTAAAACTTTTGATATTTCTGTATACATTTAAAAAATCAATTGCCACTACA GTAGTTCCTTAAGAATAATCTAGTTATATTTTTTGAAATCACATATAATTAGACTTTATAATATATATACTTTTTCATATATAATTAGAT CTTTCTTTGTAATTTCATATGTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTTATAATTGACATATTGAAAAAGTATATGAACATAA TGAAACACCTCATTTATTTGATAATTCACTAATGTTTTATATTCATATATTAGGAAAGTGAACTTAGCAAGCTTTTTGGAATTTAAGGAT CACATTTAGACATCTCATGGGCTGATGAATACAGCTGGTATCTTTGTGGAGCTTTCTAATTTACAAAATGCTTTGTAGACCCCATTGTCT TTAAACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAG CTCTCTGTCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTCCACGGAGGG AGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTC TTCGGTCAAACATGGCCCCTCTATAACCCCACTATTCTTCTCCTATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGC GCACTCTTTGTGATATTGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTTCTAAAGTGAAAGGCATGGTTTGTCCTGCTTAGGTTGCC CTTCCCAGAGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACTGCTCTACTCGAAACAAGATGGAAGCCTA AAGCCCAAGTCGAGCAGCTCCCAGCACTGCTGTGCAGACCTAGAGGTCCTTAGAACATAGTCTAAGAACCATTCATTGTAGCCATTTTAT AGTTGAGTAAACTGAGATCTTAAGTCTCCTAGTCTACTGAATTTCATATGGTGTATAATACAGATTTATATGGTAAAGATATACATATAC ATTGTGCTCAACTATACATTCCTGAATCCATTTAGGATTTGTGATTTATGTCTTGAGTAATAATATAAAGTCAACTCCAGACTGATAGGT AGTCATTAGCCATGAGAAATGTTTCAGGATGGCTAGGGAAGACTTGTGTTTTGCCTGACAGCCATTTGAATGTTAGGAAGCTTCGGGGAG ACAAGTTTTGAGAGAAGCCCCAGAGGGAGCTATTTCCTTGCACCCCCCAGAGGTGAATGAGGTATTCTATAAGTTAGTGTCTATAATTGT GAAAGTACAAACTTCTTGTTTTTGTCAAATTAATGGTATGAAATTTCTCTCCCCCTGCTTGAAGAGTTTTCTAATTCGTTTCTAGTGAGC AAAACAAAGAAGGTGCTTGAGTCACTGAAATCAAAGTACTCAGGCACACAGCCCACTGACAAGAGACACCTCATCCATTAACTGCTGTTT TGTACCACTTGCCGCCCTGTTTCTGTCAAATACCTAGTGAAAAAGGCCTAAACAATTGTAATGATATTATTTATTGGGCATTTTGTGCCA TACATGGTGATGAGCAGTTTGCATATATTTATTTATGATCTTCTTAAAACCATTCCATGAAATAGGAACTGTAATTATCCCCAATTCTAA AAGAAAAAACTTAGTTTTAGAGAGTTAGTAATCTTTGCCTAAGGGTCACAAAGCACCTATGTGTAGAAGCTAGGGTTCAAGGCAGATCTG TGATTCCAGAAGCTGTTCTCTAAACCACTATGGAGAACTGCTTAGATTCATTGTCTATGGGTACATTTTATAAAAAGGCAGATTCTAGTT CAGTGTCATAAGGAACTTTCTAGTAATTAGAGCTGATAAGAAAAGAATTCCCCAGGAGAAAATGGAAACACTATCCCAGCAATCTGAATT CCTTACTTGGGGAATGTTGCTGAGGAGGTTCAGTGTGTGAATGGACTGAACCAGTTGGCCACTCTCTCAGATTCCCTCTTCATAAAGCTT CCGTGACTTCTAAACCATCAGGTCGGTGCCATAAGAGATGCTCAAAAAAGCATGGTCAGGGCTTAGCAAGAATCCTTTTCCAGTGCAAAT ACGACCCTCATATTATGTTTTGGCGAGTAGCCAGTCTTTCTTTAACATCAATCAACCGTAGCAATGTGGTCATCACGAAGTCTTCATTGA CTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGTTCTTATGTCCTTCCGTCTCACTTTACTAGAGTGCCCAAGTTGACTCATCCT TACTCACTCATTCCCTCAAAATATTTATTGAGCACCAACAATGTCACAAGCACTGTGCTAAACACTGTGGTGAAGTAGAACAATTGCTAA TCATTTCCTGGGTTCCACTTACTCTTGATTTAAAAAAAAAAAAACAACAAAAGAGTTTGTGTGTGGCCAGGACTAAACAGCTGCTTCTTA ATTTTTGAATTTTAAAACTAATCTATTTTATTTAAAAAAAATCAAGTACTTTGGAAGTGAATAAAGTAAGAGATAGCCTGTCTCACTTTC CAGAGGTAGCAGTCACTAATACTGTGGTGAGTGATTTTACTCAAAGGAAATCACACTATTAAGCAGCTTGGTTTTGACATGTTATGTTGT GGTCATCTTTTCATGTCAATACATAGATTAATCTTTTATTTCAAATGTCTACATAAAATATCACTACCCACATAACCTATAATTTGTGTG GCCAGCAATTTATTGAACACTAAAATGTTTTAAGTTTTCTTATTGCTAACAATGTCACAGTGAACATTTATATATTCATTAAATCCTTTT CCTCATGTATCTTTGCACTCTTGTGCTAGTATGTCTATAGTGTGAATACATTCATAAATTTCTTGATCAAAGCTAGGTCAAAGTTACATT CATTTTAATTTTGGTACATATCCATAAATTCTCCATAAAAGTAGGACCAACTTACATTACCACCAATAGTGTATGTGAGCCTTATTTTTA TGTATGATAGGACTTTTTTTAGTCCAAATGTTCCTATAGATTTTCTGGGTTTTTTTTTTTTTTTTGTCCTTGGAAGAATAACCTTCCTTC CACCAAGTCCAAGAACCTGAGATTTTTAATCATTAGGTTTTAGATTTCCTTTAGCAGCAGAGACTGACTTGCTGTATAGAGGGAAGTCAA GTAGTGACTAACTCACTATATGTCAAACACATCATTACTCTTCTCTTTTCCTACTTTACATGTAATGGTTGCGAGGACCAACTTTCAAAT GAGCTAACTTGGGTGAGACGTTCACTAAAGTACCAAGCACAATACAAATGCATCTTCGAGTTCTTTGGGCCTCACTTTCCCTATCTGAAT AATAAGGATAGTAATCCCTTGCCTTTTCTCAAACCAGTTCAACTCAGCAAACACTTCCTGAGCACCTGCTACATGCCAGGCAAAATGTGA AATTTGCATGCTATGAGGCTAAATGGTACTGATTCTCAAAACAAGGAGCTCATAGTCTAAAACCATTTTTCTTTCTTTTTTTTCCCCCTA AACAACCTCTTAAAGGGGTAAGAAGTTAGGGGGTTGTTTATTAAGAACCCCTGAAGAGCAACCCTTTACCACTCTCTTAAATTTGAAAAA TTCCAAAATAATATTAACACCTCTTGACTAGAAAAGGAAAAAAAAGGAACATGCCGTATGAAGAGCCTCTCCAATAATAAATGCAAAGCA GCTGTCAAAATATAGAGTCAAGTGATACTTTCATAAAGTGTTTGCACAATTAGAAAATGTTATCCTTTTTCTCGGGAGAAATGGGACATT TTTATTTTCTCTGCTAAGTGAAATGCAACTTTTTGAAGAATCAACACGCTTGACATTTTTACAATGTACATAAAGAACTGAACTATTATT AAAACAACTTACACACTCCATTGCTTATAACTTTTGAGAGAATGAAAAGAACCTTAAACAGAATGTGCCTGTGGAGCTTCGCTTTAGAAA TGAAATACCCAAGGTGTTTTAACTACAACTGTCTACATGTAATAGTGTGTCTGCATAATGACTTTGTAAATATTAACTGCAATTCTGTAT >In-frame_ENST00000445275_ENST00000376352_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=405AA_start in transcript=114_stop in transcript=1331 MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQA LRQQVQADSKGTVSFGDFVQVARNLFCLQLDEVNVGAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEKLLESDKQRKQL TEELQNVKQEAKAVVEETRALRSRIHLAEAAQRQAHGMEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEM ARKTFEASTEKLLHFVEAIQEVFSDNSTPLSNLSERRAVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTA -------------------------------------------------------------- >In-frame_ENST00000445275_ENST00000405898_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=1780nt_BP=336nt AGAGCCCGGGAAGCGCTCGGGCGAAGAGGAGGAGCCAAGGGTACCGAGCGGGTGGAGTCGGGAGCCGGAGAGCGGTGGAGGCGGATTTCC TGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCT ACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGCA GTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATTCAG CCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCC AGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGAT TCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGTGGCCAGGGCAGAAT TAGATGAAGAGCCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTTTTTCATGTGCAGGGCTATTC TTAAGGGACATCATGTTTTGCTAACGTAATTTGGAATTAATATTATTTTAGAGAGGAAAAAAACACACATATCCCAAATATACTGTAACA TTTTTCTTCTCTTTTTTTGTTTGTTTGGTTTTTTGATTCTTGTTTTTGTTTTGTGTTTTTGAGACAGGGTCGCACTCTGTCGCCCAGGCT GGAGTGCAATACTGCAATCACGTCTCACTGCAGCCTCAACCTCCTGGGTTCAAGTGATTCTCCCACCTCAACCTCCCAAGTAACTGGGAC AACATGTCCATGCCACCATGCTCAACTAATTTTTTTTTAAATTTTTATTTTGTAGAGATGGTGTCTCACTATTTTGTTCAGACTGGTCTC AAACACCTGGGCTCAAATGACCCACCTACCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGTCTGGCCTTGATTCTCT TTATGTGGTTTCATTCTGTTTTTAGAAGAATATTACATTTAAATTATATCCTAATTTTTATAGAAAGCTATATTTTCCAAATCTTTAGGA AAAGCAACATAACTACTTGATTTACCACTAATTCGTCATAGGCACATATTTTTAAAATTATTTTATTAAATAAGGTATAGTATATTGATA ATTATTTAATTTTTATTAAATAGAAAATATTTACACCAAAAGGAAAGAAAATTTGTTTTGCTACCTTAGTTTTTATAATCTCAACCTCTA GAGGAAGCCATTGTTGCAAATATATTATTTATCTTTTCATAGATTTTTCTCTACACAGAAAATTATATTTTTTAAAAATAGGCAGGGCAT GATGGCTGACACCTTTAATCGCAGTACTTTGGGAGGCTGAGGCAAGAGGATTACTTGAGCTCAGGAGTTTAACATCAGCCTGGGCAACAT AGCAGGACCCCATCTCTACTATTTAAAACATAAAAACAAAAATAAATAAATATATGTATATGTGGGGACAGGGAGTATGTGAGAAATTTC >In-frame_ENST00000445275_ENST00000405898_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=172AA_start in transcript=114_stop in transcript=632 MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQA -------------------------------------------------------------- >In-frame_ENST00000445275_ENST00000434978_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=2281nt_BP=336nt AGAGCCCGGGAAGCGCTCGGGCGAAGAGGAGGAGCCAAGGGTACCGAGCGGGTGGAGTCGGGAGCCGGAGAGCGGTGGAGGCGGATTTCC TGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCT ACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGCA GTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATTCAG CCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCC AGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGAT TCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGGAAGCCAAAGCTGTA GTTGAAGAAACAAGAGCCCTGCGTAGTCGGATTCATCTTGCTGAAGCTGCTCAGAGACAGGCACATGGAATGGAAATGGACTATGAAGAA GTGATCCGTCTGTTAGAGGCCAAGATTACAGAGCTAAAGGCTCAGCTTGCTGATTATTCTGACCAAAATAAAGAAAGTGTTCAGGATTTA AAAAAGAGAATCATGGTACTCGACTGCCAATTACGAAAATCAGAAATGGCTCGAAAAACTTTTGAGGCATCCACTGAAAAGCTTCTTCAT TTTGTAGAGGCTATTCAAGAAGTATTTTCTGATAATTCTACTCCTTTATCAAATTTAAGTGAAAGAAGAGCTGTGTTAGCTTCTCAGACT TCCCTCACACCACTGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCTGTTCGTGCCTTA CTTGATATGGATTGTTTACCTTATGGGTGGGAGGAAGCTTACACAGCAGATGGAATCAAGTACTTCATCAATCATGTAACACAGACTACA TCCTGGATCCATCCCGTGATGAGTGTCCTGAATCTATCTCGCTCAGAGGAGAATGAAGAGGATTGCTCTAGAGAACTCCCCAACCAGAAA AGTTGATGGTTTTCCTTAGGAAGTGGAGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACAGTCTAAAAT AGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGTATTTTTGTAAAACTTTTGATATTTCTGTATACA TTTAAAAAATCAATTGCCACTACAGTAGTTCCTTAAGAATAATCTAGTTATATTTTTTGAAATCACATATAATTAGACTTTATAATATAT ATACTTTTTCATATATAATTAGATCTTTCTTTGTAATTTCATATGTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTTATAATTGACA TATTGAAAAAGTATATGAACATAATGAAACACCTCATTTATTTGATAATTCACTAATGTTTTATATTCATATATTAGGAAAGTGAACTTA GCAAGCTTTTTGGAATTTAAGGATCACATTTAGACATCTCATGGGCTGATGAATACAGCTGGTATCTTTGTGGAGCTTTCTAATTTACAA AATGCTTTGTAGACCCCATTGTCTTTAAACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAGTAGGG AAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCC ATACCCTGCTGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATT CCACAGAGATTCAGAAGGCACCTCTTCGGTCAAACATGGCCCCTCTATAACCCCACTATTCTTCTCCTATAAACCCTTCCCCCTTCTCTG CACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTTCTAAAGTGAAAGGC >In-frame_ENST00000445275_ENST00000434978_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=383AA_start in transcript=114_stop in transcript=1265 MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQA LRQQVQADSKGTVSFGDFVQVARNLFCLQLDEVNVGAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEAKAVVEETRALR SRIHLAEAAQRQAHGMEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEMARKTFEASTEKLLHFVEAIQEV FSDNSTPLSNLSERRAVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMS -------------------------------------------------------------- >In-frame_ENST00000445275_ENST00000398391_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=1780nt_BP=336nt AGAGCCCGGGAAGCGCTCGGGCGAAGAGGAGGAGCCAAGGGTACCGAGCGGGTGGAGTCGGGAGCCGGAGAGCGGTGGAGGCGGATTTCC TGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCT ACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGCA GTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATTCAG CCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCC AGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGAT TCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGTGGCCAGGGCAGAAT TAGATGAAGAGCCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTTTTTCATGTGCAGGGCTATTC TTAAGGGACATCATGTTTTGCTAACGTAATTTGGAATTAATATTATTTTAGAGAGGAAAAAAACACACATATCCCAAATATACTGTAACA TTTTTCTTCTCTTTTTTTGTTTGTTTGGTTTTTTGATTCTTGTTTTTGTTTTGTGTTTTTGAGACAGGGTCGCACTCTGTCGCCCAGGCT GGAGTGCAATACTGCAATCACGTCTCACTGCAGCCTCAACCTCCTGGGTTCAAGTGATTCTCCCACCTCAACCTCCCAAGTAACTGGGAC AACATGTCCATGCCACCATGCTCAACTAATTTTTTTTTAAATTTTTATTTTGTAGAGATGGTGTCTCACTATTTTGTTCAGACTGGTCTC AAACACCTGGGCTCAAATGACCCACCTACCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGTCTGGCCTTGATTCTCT TTATGTGGTTTCATTCTGTTTTTAGAAGAATATTACATTTAAATTATATCCTAATTTTTATAGAAAGCTATATTTTCCAAATCTTTAGGA AAAGCAACATAACTACTTGATTTACCACTAATTCGTCATAGGCACATATTTTTAAAATTATTTTATTAAATAAGGTATAGTATATTGATA ATTATTTAATTTTTATTAAATAGAAAATATTTACACCAAAAGGAAAGAAAATTTGTTTTGCTACCTTAGTTTTTATAATCTCAACCTCTA GAGGAAGCCATTGTTGCAAATATATTATTTATCTTTTCATAGATTTTTCTCTACACAGAAAATTATATTTTTTAAAAATAGGCAGGGCAT GATGGCTGACACCTTTAATCGCAGTACTTTGGGAGGCTGAGGCAAGAGGATTACTTGAGCTCAGGAGTTTAACATCAGCCTGGGCAACAT AGCAGGACCCCATCTCTACTATTTAAAACATAAAAACAAAAATAAATAAATATATGTATATGTGGGGACAGGGAGTATGTGAGAAATTTC >In-frame_ENST00000445275_ENST00000398391_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=172AA_start in transcript=114_stop in transcript=632 MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQA -------------------------------------------------------------- >In-frame_ENST00000572405_ENST00000299341_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=546nt_BP=249nt GGATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAG GCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGAT GCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATT CAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTT GCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGT GATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGTGGCCAGGGCAG >In-frame_ENST00000572405_ENST00000299341_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=137AA_start in transcript=132_stop in transcript=545 MHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQALRQQVQADSKGTVSFGDFVQVARNLFCLQLDEVNV -------------------------------------------------------------- >In-frame_ENST00000572405_ENST00000376352_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=5619nt_BP=249nt GGATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAG GCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGAT GCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATT CAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTT GCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGT GATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGGAAAAATTATTG GAATCAGATAAGCAAAGGAAACAATTGACAGAAGAGCTCCAGAATGTGAAACAAGAAGCCAAAGCTGTAGTTGAAGAAACAAGAGCCCTG CGTAGTCGGATTCATCTTGCTGAAGCTGCTCAGAGACAGGCACATGGAATGGAAATGGACTATGAAGAAGTGATCCGTCTGTTAGAGGCC AAGATTACAGAGCTAAAGGCTCAGCTTGCTGATTATTCTGACCAAAATAAAGAAAGTGTTCAGGATTTAAAAAAGAGAATCATGGTACTC GACTGCCAATTACGAAAATCAGAAATGGCTCGAAAAACTTTTGAGGCATCCACTGAAAAGCTTCTTCATTTTGTAGAGGCTATTCAAGAA GTATTTTCTGATAATTCTACTCCTTTATCAAATTTAAGTGAAAGAAGAGCTGTGTTAGCTTCTCAGACTTCCCTCACACCACTGGGAAGG AATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCTGTTCGTGCCTTACTTGATATGGATTGTTTACCT TATGGGTGGGAGGAAGCTTACACAGCAGATGGAATCAAGTACTTCATCAATCATGTAACACAGACTACATCCTGGATCCATCCCGTGATG AGTGTCCTGAATCTATCTCGCTCAGAGGAGAATGAAGAGGATTGCTCTAGAGAACTCCCCAACCAGAAAAGTTGATGGTTTTCCTTAGGA AGTGGAGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACAGTCTAAAATAGGAGTAAAGCATGCACTACT TGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGTATTTTTGTAAAACTTTTGATATTTCTGTATACATTTAAAAAATCAATTGCCACT ACAGTAGTTCCTTAAGAATAATCTAGTTATATTTTTTGAAATCACATATAATTAGACTTTATAATATATATACTTTTTCATATATAATTA GATCTTTCTTTGTAATTTCATATGTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTTATAATTGACATATTGAAAAAGTATATGAACA TAATGAAACACCTCATTTATTTGATAATTCACTAATGTTTTATATTCATATATTAGGAAAGTGAACTTAGCAAGCTTTTTGGAATTTAAG GATCACATTTAGACATCTCATGGGCTGATGAATACAGCTGGTATCTTTGTGGAGCTTTCTAATTTACAAAATGCTTTGTAGACCCCATTG TCTTTAAACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAGTAGGGAAATAGCAGTTCAGAGAGAGG AAGCTCTCTGTCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTCCACGGA GGGAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCAC CTCTTCGGTCAAACATGGCCCCTCTATAACCCCACTATTCTTCTCCTATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTA GGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTTCTAAAGTGAAAGGCATGGTTTGTCCTGCTTAGGTT GCCCTTCCCAGAGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACTGCTCTACTCGAAACAAGATGGAAGC CTAAAGCCCAAGTCGAGCAGCTCCCAGCACTGCTGTGCAGACCTAGAGGTCCTTAGAACATAGTCTAAGAACCATTCATTGTAGCCATTT TATAGTTGAGTAAACTGAGATCTTAAGTCTCCTAGTCTACTGAATTTCATATGGTGTATAATACAGATTTATATGGTAAAGATATACATA TACATTGTGCTCAACTATACATTCCTGAATCCATTTAGGATTTGTGATTTATGTCTTGAGTAATAATATAAAGTCAACTCCAGACTGATA GGTAGTCATTAGCCATGAGAAATGTTTCAGGATGGCTAGGGAAGACTTGTGTTTTGCCTGACAGCCATTTGAATGTTAGGAAGCTTCGGG GAGACAAGTTTTGAGAGAAGCCCCAGAGGGAGCTATTTCCTTGCACCCCCCAGAGGTGAATGAGGTATTCTATAAGTTAGTGTCTATAAT TGTGAAAGTACAAACTTCTTGTTTTTGTCAAATTAATGGTATGAAATTTCTCTCCCCCTGCTTGAAGAGTTTTCTAATTCGTTTCTAGTG AGCAAAACAAAGAAGGTGCTTGAGTCACTGAAATCAAAGTACTCAGGCACACAGCCCACTGACAAGAGACACCTCATCCATTAACTGCTG TTTTGTACCACTTGCCGCCCTGTTTCTGTCAAATACCTAGTGAAAAAGGCCTAAACAATTGTAATGATATTATTTATTGGGCATTTTGTG CCATACATGGTGATGAGCAGTTTGCATATATTTATTTATGATCTTCTTAAAACCATTCCATGAAATAGGAACTGTAATTATCCCCAATTC TAAAAGAAAAAACTTAGTTTTAGAGAGTTAGTAATCTTTGCCTAAGGGTCACAAAGCACCTATGTGTAGAAGCTAGGGTTCAAGGCAGAT CTGTGATTCCAGAAGCTGTTCTCTAAACCACTATGGAGAACTGCTTAGATTCATTGTCTATGGGTACATTTTATAAAAAGGCAGATTCTA GTTCAGTGTCATAAGGAACTTTCTAGTAATTAGAGCTGATAAGAAAAGAATTCCCCAGGAGAAAATGGAAACACTATCCCAGCAATCTGA ATTCCTTACTTGGGGAATGTTGCTGAGGAGGTTCAGTGTGTGAATGGACTGAACCAGTTGGCCACTCTCTCAGATTCCCTCTTCATAAAG CTTCCGTGACTTCTAAACCATCAGGTCGGTGCCATAAGAGATGCTCAAAAAAGCATGGTCAGGGCTTAGCAAGAATCCTTTTCCAGTGCA AATACGACCCTCATATTATGTTTTGGCGAGTAGCCAGTCTTTCTTTAACATCAATCAACCGTAGCAATGTGGTCATCACGAAGTCTTCAT TGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGTTCTTATGTCCTTCCGTCTCACTTTACTAGAGTGCCCAAGTTGACTCAT CCTTACTCACTCATTCCCTCAAAATATTTATTGAGCACCAACAATGTCACAAGCACTGTGCTAAACACTGTGGTGAAGTAGAACAATTGC TAATCATTTCCTGGGTTCCACTTACTCTTGATTTAAAAAAAAAAAAACAACAAAAGAGTTTGTGTGTGGCCAGGACTAAACAGCTGCTTC TTAATTTTTGAATTTTAAAACTAATCTATTTTATTTAAAAAAAATCAAGTACTTTGGAAGTGAATAAAGTAAGAGATAGCCTGTCTCACT TTCCAGAGGTAGCAGTCACTAATACTGTGGTGAGTGATTTTACTCAAAGGAAATCACACTATTAAGCAGCTTGGTTTTGACATGTTATGT TGTGGTCATCTTTTCATGTCAATACATAGATTAATCTTTTATTTCAAATGTCTACATAAAATATCACTACCCACATAACCTATAATTTGT GTGGCCAGCAATTTATTGAACACTAAAATGTTTTAAGTTTTCTTATTGCTAACAATGTCACAGTGAACATTTATATATTCATTAAATCCT TTTCCTCATGTATCTTTGCACTCTTGTGCTAGTATGTCTATAGTGTGAATACATTCATAAATTTCTTGATCAAAGCTAGGTCAAAGTTAC ATTCATTTTAATTTTGGTACATATCCATAAATTCTCCATAAAAGTAGGACCAACTTACATTACCACCAATAGTGTATGTGAGCCTTATTT TTATGTATGATAGGACTTTTTTTAGTCCAAATGTTCCTATAGATTTTCTGGGTTTTTTTTTTTTTTTTGTCCTTGGAAGAATAACCTTCC TTCCACCAAGTCCAAGAACCTGAGATTTTTAATCATTAGGTTTTAGATTTCCTTTAGCAGCAGAGACTGACTTGCTGTATAGAGGGAAGT CAAGTAGTGACTAACTCACTATATGTCAAACACATCATTACTCTTCTCTTTTCCTACTTTACATGTAATGGTTGCGAGGACCAACTTTCA AATGAGCTAACTTGGGTGAGACGTTCACTAAAGTACCAAGCACAATACAAATGCATCTTCGAGTTCTTTGGGCCTCACTTTCCCTATCTG AATAATAAGGATAGTAATCCCTTGCCTTTTCTCAAACCAGTTCAACTCAGCAAACACTTCCTGAGCACCTGCTACATGCCAGGCAAAATG TGAAATTTGCATGCTATGAGGCTAAATGGTACTGATTCTCAAAACAAGGAGCTCATAGTCTAAAACCATTTTTCTTTCTTTTTTTTCCCC CTAAACAACCTCTTAAAGGGGTAAGAAGTTAGGGGGTTGTTTATTAAGAACCCCTGAAGAGCAACCCTTTACCACTCTCTTAAATTTGAA AAATTCCAAAATAATATTAACACCTCTTGACTAGAAAAGGAAAAAAAAGGAACATGCCGTATGAAGAGCCTCTCCAATAATAAATGCAAA GCAGCTGTCAAAATATAGAGTCAAGTGATACTTTCATAAAGTGTTTGCACAATTAGAAAATGTTATCCTTTTTCTCGGGAGAAATGGGAC ATTTTTATTTTCTCTGCTAAGTGAAATGCAACTTTTTGAAGAATCAACACGCTTGACATTTTTACAATGTACATAAAGAACTGAACTATT ATTAAAACAACTTACACACTCCATTGCTTATAACTTTTGAGAGAATGAAAAGAACCTTAAACAGAATGTGCCTGTGGAGCTTCGCTTTAG AAATGAAATACCCAAGGTGTTTTAACTACAACTGTCTACATGTAATAGTGTGTCTGCATAATGACTTTGTAAATATTAACTGCAATTCTG >In-frame_ENST00000572405_ENST00000376352_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=370AA_start in transcript=132_stop in transcript=1244 MHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQALRQQVQADSKGTVSFGDFVQVARNLFCLQLDEVNV GAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEKLLESDKQRKQLTEELQNVKQEAKAVVEETRALRSRIHLAEAAQRQA HGMEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEMARKTFEASTEKLLHFVEAIQEVFSDNSTPLSNLSE RRAVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMSVLNLSRSEENEED -------------------------------------------------------------- >In-frame_ENST00000572405_ENST00000405898_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=1693nt_BP=249nt GGATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAG GCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGAT GCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATT CAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTT GCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGT GATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGTGGCCAGGGCAG AATTAGATGAAGAGCCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTTTTTCATGTGCAGGGCTA TTCTTAAGGGACATCATGTTTTGCTAACGTAATTTGGAATTAATATTATTTTAGAGAGGAAAAAAACACACATATCCCAAATATACTGTA ACATTTTTCTTCTCTTTTTTTGTTTGTTTGGTTTTTTGATTCTTGTTTTTGTTTTGTGTTTTTGAGACAGGGTCGCACTCTGTCGCCCAG GCTGGAGTGCAATACTGCAATCACGTCTCACTGCAGCCTCAACCTCCTGGGTTCAAGTGATTCTCCCACCTCAACCTCCCAAGTAACTGG GACAACATGTCCATGCCACCATGCTCAACTAATTTTTTTTTAAATTTTTATTTTGTAGAGATGGTGTCTCACTATTTTGTTCAGACTGGT CTCAAACACCTGGGCTCAAATGACCCACCTACCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGTCTGGCCTTGATTC TCTTTATGTGGTTTCATTCTGTTTTTAGAAGAATATTACATTTAAATTATATCCTAATTTTTATAGAAAGCTATATTTTCCAAATCTTTA GGAAAAGCAACATAACTACTTGATTTACCACTAATTCGTCATAGGCACATATTTTTAAAATTATTTTATTAAATAAGGTATAGTATATTG ATAATTATTTAATTTTTATTAAATAGAAAATATTTACACCAAAAGGAAAGAAAATTTGTTTTGCTACCTTAGTTTTTATAATCTCAACCT CTAGAGGAAGCCATTGTTGCAAATATATTATTTATCTTTTCATAGATTTTTCTCTACACAGAAAATTATATTTTTTAAAAATAGGCAGGG CATGATGGCTGACACCTTTAATCGCAGTACTTTGGGAGGCTGAGGCAAGAGGATTACTTGAGCTCAGGAGTTTAACATCAGCCTGGGCAA CATAGCAGGACCCCATCTCTACTATTTAAAACATAAAAACAAAAATAAATAAATATATGTATATGTGGGGACAGGGAGTATGTGAGAAAT >In-frame_ENST00000572405_ENST00000405898_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=137AA_start in transcript=132_stop in transcript=545 MHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQALRQQVQADSKGTVSFGDFVQVARNLFCLQLDEVNV -------------------------------------------------------------- >In-frame_ENST00000572405_ENST00000434978_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=2194nt_BP=249nt GGATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAG GCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGAT GCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATT CAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTT GCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGT GATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGGAAGCCAAAGCT GTAGTTGAAGAAACAAGAGCCCTGCGTAGTCGGATTCATCTTGCTGAAGCTGCTCAGAGACAGGCACATGGAATGGAAATGGACTATGAA GAAGTGATCCGTCTGTTAGAGGCCAAGATTACAGAGCTAAAGGCTCAGCTTGCTGATTATTCTGACCAAAATAAAGAAAGTGTTCAGGAT TTAAAAAAGAGAATCATGGTACTCGACTGCCAATTACGAAAATCAGAAATGGCTCGAAAAACTTTTGAGGCATCCACTGAAAAGCTTCTT CATTTTGTAGAGGCTATTCAAGAAGTATTTTCTGATAATTCTACTCCTTTATCAAATTTAAGTGAAAGAAGAGCTGTGTTAGCTTCTCAG ACTTCCCTCACACCACTGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCTGTTCGTGCC TTACTTGATATGGATTGTTTACCTTATGGGTGGGAGGAAGCTTACACAGCAGATGGAATCAAGTACTTCATCAATCATGTAACACAGACT ACATCCTGGATCCATCCCGTGATGAGTGTCCTGAATCTATCTCGCTCAGAGGAGAATGAAGAGGATTGCTCTAGAGAACTCCCCAACCAG AAAAGTTGATGGTTTTCCTTAGGAAGTGGAGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACAGTCTAA AATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGTATTTTTGTAAAACTTTTGATATTTCTGTAT ACATTTAAAAAATCAATTGCCACTACAGTAGTTCCTTAAGAATAATCTAGTTATATTTTTTGAAATCACATATAATTAGACTTTATAATA TATATACTTTTTCATATATAATTAGATCTTTCTTTGTAATTTCATATGTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTTATAATTG ACATATTGAAAAAGTATATGAACATAATGAAACACCTCATTTATTTGATAATTCACTAATGTTTTATATTCATATATTAGGAAAGTGAAC TTAGCAAGCTTTTTGGAATTTAAGGATCACATTTAGACATCTCATGGGCTGATGAATACAGCTGGTATCTTTGTGGAGCTTTCTAATTTA CAAAATGCTTTGTAGACCCCATTGTCTTTAAACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAGTA GGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCC CCCATACCCTGCTGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGC ATTCCACAGAGATTCAGAAGGCACCTCTTCGGTCAAACATGGCCCCTCTATAACCCCACTATTCTTCTCCTATAAACCCTTCCCCCTTCT CTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTTCTAAAGTGAAA >In-frame_ENST00000572405_ENST00000434978_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=348AA_start in transcript=132_stop in transcript=1178 MHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQALRQQVQADSKGTVSFGDFVQVARNLFCLQLDEVNV GAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEAKAVVEETRALRSRIHLAEAAQRQAHGMEMDYEEVIRLLEAKITELK AQLADYSDQNKESVQDLKKRIMVLDCQLRKSEMARKTFEASTEKLLHFVEAIQEVFSDNSTPLSNLSERRAVLASQTSLTPLGRNGRSIP -------------------------------------------------------------- >In-frame_ENST00000572405_ENST00000398391_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=1693nt_BP=249nt GGATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAG GCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGAT GCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATT CAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTT GCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGT GATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGTGGCCAGGGCAG AATTAGATGAAGAGCCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTTTTTCATGTGCAGGGCTA TTCTTAAGGGACATCATGTTTTGCTAACGTAATTTGGAATTAATATTATTTTAGAGAGGAAAAAAACACACATATCCCAAATATACTGTA ACATTTTTCTTCTCTTTTTTTGTTTGTTTGGTTTTTTGATTCTTGTTTTTGTTTTGTGTTTTTGAGACAGGGTCGCACTCTGTCGCCCAG GCTGGAGTGCAATACTGCAATCACGTCTCACTGCAGCCTCAACCTCCTGGGTTCAAGTGATTCTCCCACCTCAACCTCCCAAGTAACTGG GACAACATGTCCATGCCACCATGCTCAACTAATTTTTTTTTAAATTTTTATTTTGTAGAGATGGTGTCTCACTATTTTGTTCAGACTGGT CTCAAACACCTGGGCTCAAATGACCCACCTACCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGTCTGGCCTTGATTC TCTTTATGTGGTTTCATTCTGTTTTTAGAAGAATATTACATTTAAATTATATCCTAATTTTTATAGAAAGCTATATTTTCCAAATCTTTA GGAAAAGCAACATAACTACTTGATTTACCACTAATTCGTCATAGGCACATATTTTTAAAATTATTTTATTAAATAAGGTATAGTATATTG ATAATTATTTAATTTTTATTAAATAGAAAATATTTACACCAAAAGGAAAGAAAATTTGTTTTGCTACCTTAGTTTTTATAATCTCAACCT CTAGAGGAAGCCATTGTTGCAAATATATTATTTATCTTTTCATAGATTTTTCTCTACACAGAAAATTATATTTTTTAAAAATAGGCAGGG CATGATGGCTGACACCTTTAATCGCAGTACTTTGGGAGGCTGAGGCAAGAGGATTACTTGAGCTCAGGAGTTTAACATCAGCCTGGGCAA CATAGCAGGACCCCATCTCTACTATTTAAAACATAAAAACAAAAATAAATAAATATATGTATATGTGGGGACAGGGAGTATGTGAGAAAT >In-frame_ENST00000572405_ENST00000398391_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=137AA_start in transcript=132_stop in transcript=545 MHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQALRQQVQADSKGTVSFGDFVQVARNLFCLQLDEVNV -------------------------------------------------------------- >In-frame_ENST00000572158_ENST00000299341_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=549nt_BP=252nt ATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAA AAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAA GATGCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGT ATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAG GTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCT TGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGTGGCCAGGG >In-frame_ENST00000572158_ENST00000299341_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=172AA_start in transcript=30_stop in transcript=548 MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQA -------------------------------------------------------------- >In-frame_ENST00000572158_ENST00000376352_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=5622nt_BP=252nt ATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAA AAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAA GATGCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGT ATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAG GTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCT TGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGGAAAAATTA TTGGAATCAGATAAGCAAAGGAAACAATTGACAGAAGAGCTCCAGAATGTGAAACAAGAAGCCAAAGCTGTAGTTGAAGAAACAAGAGCC CTGCGTAGTCGGATTCATCTTGCTGAAGCTGCTCAGAGACAGGCACATGGAATGGAAATGGACTATGAAGAAGTGATCCGTCTGTTAGAG GCCAAGATTACAGAGCTAAAGGCTCAGCTTGCTGATTATTCTGACCAAAATAAAGAAAGTGTTCAGGATTTAAAAAAGAGAATCATGGTA CTCGACTGCCAATTACGAAAATCAGAAATGGCTCGAAAAACTTTTGAGGCATCCACTGAAAAGCTTCTTCATTTTGTAGAGGCTATTCAA GAAGTATTTTCTGATAATTCTACTCCTTTATCAAATTTAAGTGAAAGAAGAGCTGTGTTAGCTTCTCAGACTTCCCTCACACCACTGGGA AGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCTGTTCGTGCCTTACTTGATATGGATTGTTTA CCTTATGGGTGGGAGGAAGCTTACACAGCAGATGGAATCAAGTACTTCATCAATCATGTAACACAGACTACATCCTGGATCCATCCCGTG ATGAGTGTCCTGAATCTATCTCGCTCAGAGGAGAATGAAGAGGATTGCTCTAGAGAACTCCCCAACCAGAAAAGTTGATGGTTTTCCTTA GGAAGTGGAGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACAGTCTAAAATAGGAGTAAAGCATGCACT ACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGTATTTTTGTAAAACTTTTGATATTTCTGTATACATTTAAAAAATCAATTGCC ACTACAGTAGTTCCTTAAGAATAATCTAGTTATATTTTTTGAAATCACATATAATTAGACTTTATAATATATATACTTTTTCATATATAA TTAGATCTTTCTTTGTAATTTCATATGTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTTATAATTGACATATTGAAAAAGTATATGA ACATAATGAAACACCTCATTTATTTGATAATTCACTAATGTTTTATATTCATATATTAGGAAAGTGAACTTAGCAAGCTTTTTGGAATTT AAGGATCACATTTAGACATCTCATGGGCTGATGAATACAGCTGGTATCTTTGTGGAGCTTTCTAATTTACAAAATGCTTTGTAGACCCCA TTGTCTTTAAACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAGTAGGGAAATAGCAGTTCAGAGAG AGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTCCAC GGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGG CACCTCTTCGGTCAAACATGGCCCCTCTATAACCCCACTATTCTTCTCCTATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAA GTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTTCTAAAGTGAAAGGCATGGTTTGTCCTGCTTAG GTTGCCCTTCCCAGAGGGATGGTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACTGCTCTACTCGAAACAAGATGGA AGCCTAAAGCCCAAGTCGAGCAGCTCCCAGCACTGCTGTGCAGACCTAGAGGTCCTTAGAACATAGTCTAAGAACCATTCATTGTAGCCA TTTTATAGTTGAGTAAACTGAGATCTTAAGTCTCCTAGTCTACTGAATTTCATATGGTGTATAATACAGATTTATATGGTAAAGATATAC ATATACATTGTGCTCAACTATACATTCCTGAATCCATTTAGGATTTGTGATTTATGTCTTGAGTAATAATATAAAGTCAACTCCAGACTG ATAGGTAGTCATTAGCCATGAGAAATGTTTCAGGATGGCTAGGGAAGACTTGTGTTTTGCCTGACAGCCATTTGAATGTTAGGAAGCTTC GGGGAGACAAGTTTTGAGAGAAGCCCCAGAGGGAGCTATTTCCTTGCACCCCCCAGAGGTGAATGAGGTATTCTATAAGTTAGTGTCTAT AATTGTGAAAGTACAAACTTCTTGTTTTTGTCAAATTAATGGTATGAAATTTCTCTCCCCCTGCTTGAAGAGTTTTCTAATTCGTTTCTA GTGAGCAAAACAAAGAAGGTGCTTGAGTCACTGAAATCAAAGTACTCAGGCACACAGCCCACTGACAAGAGACACCTCATCCATTAACTG CTGTTTTGTACCACTTGCCGCCCTGTTTCTGTCAAATACCTAGTGAAAAAGGCCTAAACAATTGTAATGATATTATTTATTGGGCATTTT GTGCCATACATGGTGATGAGCAGTTTGCATATATTTATTTATGATCTTCTTAAAACCATTCCATGAAATAGGAACTGTAATTATCCCCAA TTCTAAAAGAAAAAACTTAGTTTTAGAGAGTTAGTAATCTTTGCCTAAGGGTCACAAAGCACCTATGTGTAGAAGCTAGGGTTCAAGGCA GATCTGTGATTCCAGAAGCTGTTCTCTAAACCACTATGGAGAACTGCTTAGATTCATTGTCTATGGGTACATTTTATAAAAAGGCAGATT CTAGTTCAGTGTCATAAGGAACTTTCTAGTAATTAGAGCTGATAAGAAAAGAATTCCCCAGGAGAAAATGGAAACACTATCCCAGCAATC TGAATTCCTTACTTGGGGAATGTTGCTGAGGAGGTTCAGTGTGTGAATGGACTGAACCAGTTGGCCACTCTCTCAGATTCCCTCTTCATA AAGCTTCCGTGACTTCTAAACCATCAGGTCGGTGCCATAAGAGATGCTCAAAAAAGCATGGTCAGGGCTTAGCAAGAATCCTTTTCCAGT GCAAATACGACCCTCATATTATGTTTTGGCGAGTAGCCAGTCTTTCTTTAACATCAATCAACCGTAGCAATGTGGTCATCACGAAGTCTT CATTGACTCACTGGCTTGGATTTTAGGGTTAGAAAATCTGAATGTTCTTATGTCCTTCCGTCTCACTTTACTAGAGTGCCCAAGTTGACT CATCCTTACTCACTCATTCCCTCAAAATATTTATTGAGCACCAACAATGTCACAAGCACTGTGCTAAACACTGTGGTGAAGTAGAACAAT TGCTAATCATTTCCTGGGTTCCACTTACTCTTGATTTAAAAAAAAAAAAACAACAAAAGAGTTTGTGTGTGGCCAGGACTAAACAGCTGC TTCTTAATTTTTGAATTTTAAAACTAATCTATTTTATTTAAAAAAAATCAAGTACTTTGGAAGTGAATAAAGTAAGAGATAGCCTGTCTC ACTTTCCAGAGGTAGCAGTCACTAATACTGTGGTGAGTGATTTTACTCAAAGGAAATCACACTATTAAGCAGCTTGGTTTTGACATGTTA TGTTGTGGTCATCTTTTCATGTCAATACATAGATTAATCTTTTATTTCAAATGTCTACATAAAATATCACTACCCACATAACCTATAATT TGTGTGGCCAGCAATTTATTGAACACTAAAATGTTTTAAGTTTTCTTATTGCTAACAATGTCACAGTGAACATTTATATATTCATTAAAT CCTTTTCCTCATGTATCTTTGCACTCTTGTGCTAGTATGTCTATAGTGTGAATACATTCATAAATTTCTTGATCAAAGCTAGGTCAAAGT TACATTCATTTTAATTTTGGTACATATCCATAAATTCTCCATAAAAGTAGGACCAACTTACATTACCACCAATAGTGTATGTGAGCCTTA TTTTTATGTATGATAGGACTTTTTTTAGTCCAAATGTTCCTATAGATTTTCTGGGTTTTTTTTTTTTTTTTGTCCTTGGAAGAATAACCT TCCTTCCACCAAGTCCAAGAACCTGAGATTTTTAATCATTAGGTTTTAGATTTCCTTTAGCAGCAGAGACTGACTTGCTGTATAGAGGGA AGTCAAGTAGTGACTAACTCACTATATGTCAAACACATCATTACTCTTCTCTTTTCCTACTTTACATGTAATGGTTGCGAGGACCAACTT TCAAATGAGCTAACTTGGGTGAGACGTTCACTAAAGTACCAAGCACAATACAAATGCATCTTCGAGTTCTTTGGGCCTCACTTTCCCTAT CTGAATAATAAGGATAGTAATCCCTTGCCTTTTCTCAAACCAGTTCAACTCAGCAAACACTTCCTGAGCACCTGCTACATGCCAGGCAAA ATGTGAAATTTGCATGCTATGAGGCTAAATGGTACTGATTCTCAAAACAAGGAGCTCATAGTCTAAAACCATTTTTCTTTCTTTTTTTTC CCCCTAAACAACCTCTTAAAGGGGTAAGAAGTTAGGGGGTTGTTTATTAAGAACCCCTGAAGAGCAACCCTTTACCACTCTCTTAAATTT GAAAAATTCCAAAATAATATTAACACCTCTTGACTAGAAAAGGAAAAAAAAGGAACATGCCGTATGAAGAGCCTCTCCAATAATAAATGC AAAGCAGCTGTCAAAATATAGAGTCAAGTGATACTTTCATAAAGTGTTTGCACAATTAGAAAATGTTATCCTTTTTCTCGGGAGAAATGG GACATTTTTATTTTCTCTGCTAAGTGAAATGCAACTTTTTGAAGAATCAACACGCTTGACATTTTTACAATGTACATAAAGAACTGAACT ATTATTAAAACAACTTACACACTCCATTGCTTATAACTTTTGAGAGAATGAAAAGAACCTTAAACAGAATGTGCCTGTGGAGCTTCGCTT TAGAAATGAAATACCCAAGGTGTTTTAACTACAACTGTCTACATGTAATAGTGTGTCTGCATAATGACTTTGTAAATATTAACTGCAATT >In-frame_ENST00000572158_ENST00000376352_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=405AA_start in transcript=30_stop in transcript=1247 MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQA LRQQVQADSKGTVSFGDFVQVARNLFCLQLDEVNVGAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEKLLESDKQRKQL TEELQNVKQEAKAVVEETRALRSRIHLAEAAQRQAHGMEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEM ARKTFEASTEKLLHFVEAIQEVFSDNSTPLSNLSERRAVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTA -------------------------------------------------------------- >In-frame_ENST00000572158_ENST00000405898_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=1696nt_BP=252nt ATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAA AAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAA GATGCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGT ATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAG GTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCT TGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGTGGCCAGGG CAGAATTAGATGAAGAGCCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTTTTTCATGTGCAGGG CTATTCTTAAGGGACATCATGTTTTGCTAACGTAATTTGGAATTAATATTATTTTAGAGAGGAAAAAAACACACATATCCCAAATATACT GTAACATTTTTCTTCTCTTTTTTTGTTTGTTTGGTTTTTTGATTCTTGTTTTTGTTTTGTGTTTTTGAGACAGGGTCGCACTCTGTCGCC CAGGCTGGAGTGCAATACTGCAATCACGTCTCACTGCAGCCTCAACCTCCTGGGTTCAAGTGATTCTCCCACCTCAACCTCCCAAGTAAC TGGGACAACATGTCCATGCCACCATGCTCAACTAATTTTTTTTTAAATTTTTATTTTGTAGAGATGGTGTCTCACTATTTTGTTCAGACT GGTCTCAAACACCTGGGCTCAAATGACCCACCTACCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGTCTGGCCTTGA TTCTCTTTATGTGGTTTCATTCTGTTTTTAGAAGAATATTACATTTAAATTATATCCTAATTTTTATAGAAAGCTATATTTTCCAAATCT TTAGGAAAAGCAACATAACTACTTGATTTACCACTAATTCGTCATAGGCACATATTTTTAAAATTATTTTATTAAATAAGGTATAGTATA TTGATAATTATTTAATTTTTATTAAATAGAAAATATTTACACCAAAAGGAAAGAAAATTTGTTTTGCTACCTTAGTTTTTATAATCTCAA CCTCTAGAGGAAGCCATTGTTGCAAATATATTATTTATCTTTTCATAGATTTTTCTCTACACAGAAAATTATATTTTTTAAAAATAGGCA GGGCATGATGGCTGACACCTTTAATCGCAGTACTTTGGGAGGCTGAGGCAAGAGGATTACTTGAGCTCAGGAGTTTAACATCAGCCTGGG CAACATAGCAGGACCCCATCTCTACTATTTAAAACATAAAAACAAAAATAAATAAATATATGTATATGTGGGGACAGGGAGTATGTGAGA >In-frame_ENST00000572158_ENST00000405898_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=172AA_start in transcript=30_stop in transcript=548 MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQA -------------------------------------------------------------- >In-frame_ENST00000572158_ENST00000434978_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=2197nt_BP=252nt ATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAA AAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAA GATGCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGT ATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAG GTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCT TGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGGAAGCCAAA GCTGTAGTTGAAGAAACAAGAGCCCTGCGTAGTCGGATTCATCTTGCTGAAGCTGCTCAGAGACAGGCACATGGAATGGAAATGGACTAT GAAGAAGTGATCCGTCTGTTAGAGGCCAAGATTACAGAGCTAAAGGCTCAGCTTGCTGATTATTCTGACCAAAATAAAGAAAGTGTTCAG GATTTAAAAAAGAGAATCATGGTACTCGACTGCCAATTACGAAAATCAGAAATGGCTCGAAAAACTTTTGAGGCATCCACTGAAAAGCTT CTTCATTTTGTAGAGGCTATTCAAGAAGTATTTTCTGATAATTCTACTCCTTTATCAAATTTAAGTGAAAGAAGAGCTGTGTTAGCTTCT CAGACTTCCCTCACACCACTGGGAAGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCTGTTCGT GCCTTACTTGATATGGATTGTTTACCTTATGGGTGGGAGGAAGCTTACACAGCAGATGGAATCAAGTACTTCATCAATCATGTAACACAG ACTACATCCTGGATCCATCCCGTGATGAGTGTCCTGAATCTATCTCGCTCAGAGGAGAATGAAGAGGATTGCTCTAGAGAACTCCCCAAC CAGAAAAGTTGATGGTTTTCCTTAGGAAGTGGAGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACAGTC TAAAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGTATTTTTGTAAAACTTTTGATATTTCTG TATACATTTAAAAAATCAATTGCCACTACAGTAGTTCCTTAAGAATAATCTAGTTATATTTTTTGAAATCACATATAATTAGACTTTATA ATATATATACTTTTTCATATATAATTAGATCTTTCTTTGTAATTTCATATGTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTTATAA TTGACATATTGAAAAAGTATATGAACATAATGAAACACCTCATTTATTTGATAATTCACTAATGTTTTATATTCATATATTAGGAAAGTG AACTTAGCAAGCTTTTTGGAATTTAAGGATCACATTTAGACATCTCATGGGCTGATGAATACAGCTGGTATCTTTGTGGAGCTTTCTAAT TTACAAAATGCTTTGTAGACCCCATTGTCTTTAAACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCA GTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCT TCCCCCATACCCTGCTGTCTCCACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTG TGCATTCCACAGAGATTCAGAAGGCACCTCTTCGGTCAAACATGGCCCCTCTATAACCCCACTATTCTTCTCCTATAAACCCTTCCCCCT TCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTTCTAAAGTG >In-frame_ENST00000572158_ENST00000434978_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=383AA_start in transcript=30_stop in transcript=1181 MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQA LRQQVQADSKGTVSFGDFVQVARNLFCLQLDEVNVGAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEAKAVVEETRALR SRIHLAEAAQRQAHGMEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEMARKTFEASTEKLLHFVEAIQEV FSDNSTPLSNLSERRAVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMS -------------------------------------------------------------- >In-frame_ENST00000572158_ENST00000398391_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=1696nt_BP=252nt ATTTCCTGGGCCCGGCCCTCTGGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAA AAGGCTACATTTGCTGGAGTTCAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAA GATGCAGTGAAAGCTTTGAAGAAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGT ATTCAGCCCACAAAGGAACAACACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAG GTTGCCAGAAACTTGTTTTGCTTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCT TGTGATTCTTCAGAAGCAGATGAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGTGGCCAGGG CAGAATTAGATGAAGAGCCAATAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTTTTTCATGTGCAGGG CTATTCTTAAGGGACATCATGTTTTGCTAACGTAATTTGGAATTAATATTATTTTAGAGAGGAAAAAAACACACATATCCCAAATATACT GTAACATTTTTCTTCTCTTTTTTTGTTTGTTTGGTTTTTTGATTCTTGTTTTTGTTTTGTGTTTTTGAGACAGGGTCGCACTCTGTCGCC CAGGCTGGAGTGCAATACTGCAATCACGTCTCACTGCAGCCTCAACCTCCTGGGTTCAAGTGATTCTCCCACCTCAACCTCCCAAGTAAC TGGGACAACATGTCCATGCCACCATGCTCAACTAATTTTTTTTTAAATTTTTATTTTGTAGAGATGGTGTCTCACTATTTTGTTCAGACT GGTCTCAAACACCTGGGCTCAAATGACCCACCTACCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGTCTGGCCTTGA TTCTCTTTATGTGGTTTCATTCTGTTTTTAGAAGAATATTACATTTAAATTATATCCTAATTTTTATAGAAAGCTATATTTTCCAAATCT TTAGGAAAAGCAACATAACTACTTGATTTACCACTAATTCGTCATAGGCACATATTTTTAAAATTATTTTATTAAATAAGGTATAGTATA TTGATAATTATTTAATTTTTATTAAATAGAAAATATTTACACCAAAAGGAAAGAAAATTTGTTTTGCTACCTTAGTTTTTATAATCTCAA CCTCTAGAGGAAGCCATTGTTGCAAATATATTATTTATCTTTTCATAGATTTTTCTCTACACAGAAAATTATATTTTTTAAAAATAGGCA GGGCATGATGGCTGACACCTTTAATCGCAGTACTTTGGGAGGCTGAGGCAAGAGGATTACTTGAGCTCAGGAGTTTAACATCAGCCTGGG CAACATAGCAGGACCCCATCTCTACTATTTAAAACATAAAAACAAAAATAAATAAATATATGTATATGTGGGGACAGGGAGTATGTGAGA >In-frame_ENST00000572158_ENST00000398391_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=172AA_start in transcript=30_stop in transcript=548 MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQA -------------------------------------------------------------- >In-frame_ENST00000575333_ENST00000299341_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=528nt_BP=231nt GGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCTACATTTGCTGGAGTT CAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAG AAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAA CACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGC TTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGAT >In-frame_ENST00000575333_ENST00000299341_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=172AA_start in transcript=9_stop in transcript=527 MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQA -------------------------------------------------------------- >In-frame_ENST00000575333_ENST00000376352_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=5601nt_BP=231nt GGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCTACATTTGCTGGAGTT CAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAG AAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAA CACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGC TTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGAT GAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGGAAAAATTATTGGAATCAGATAAGCAAAGG AAACAATTGACAGAAGAGCTCCAGAATGTGAAACAAGAAGCCAAAGCTGTAGTTGAAGAAACAAGAGCCCTGCGTAGTCGGATTCATCTT GCTGAAGCTGCTCAGAGACAGGCACATGGAATGGAAATGGACTATGAAGAAGTGATCCGTCTGTTAGAGGCCAAGATTACAGAGCTAAAG GCTCAGCTTGCTGATTATTCTGACCAAAATAAAGAAAGTGTTCAGGATTTAAAAAAGAGAATCATGGTACTCGACTGCCAATTACGAAAA TCAGAAATGGCTCGAAAAACTTTTGAGGCATCCACTGAAAAGCTTCTTCATTTTGTAGAGGCTATTCAAGAAGTATTTTCTGATAATTCT ACTCCTTTATCAAATTTAAGTGAAAGAAGAGCTGTGTTAGCTTCTCAGACTTCCCTCACACCACTGGGAAGGAATGGACGTAGCATCCCA GCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCTGTTCGTGCCTTACTTGATATGGATTGTTTACCTTATGGGTGGGAGGAAGCT TACACAGCAGATGGAATCAAGTACTTCATCAATCATGTAACACAGACTACATCCTGGATCCATCCCGTGATGAGTGTCCTGAATCTATCT CGCTCAGAGGAGAATGAAGAGGATTGCTCTAGAGAACTCCCCAACCAGAAAAGTTGATGGTTTTCCTTAGGAAGTGGAGCTACATGGATG ATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACAGTCTAAAATAGGAGTAAAGCATGCACTACTTGTTGAAGTGTGAAATGG AGACTCTGGACTTTGGGTATTTTTGTAAAACTTTTGATATTTCTGTATACATTTAAAAAATCAATTGCCACTACAGTAGTTCCTTAAGAA TAATCTAGTTATATTTTTTGAAATCACATATAATTAGACTTTATAATATATATACTTTTTCATATATAATTAGATCTTTCTTTGTAATTT CATATGTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTTATAATTGACATATTGAAAAAGTATATGAACATAATGAAACACCTCATTT ATTTGATAATTCACTAATGTTTTATATTCATATATTAGGAAAGTGAACTTAGCAAGCTTTTTGGAATTTAAGGATCACATTTAGACATCT CATGGGCTGATGAATACAGCTGGTATCTTTGTGGAGCTTTCTAATTTACAAAATGCTTTGTAGACCCCATTGTCTTTAAACCATACAACA TGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAGTAGGGAAATAGCAGTTCAGAGAGAGGAAGCTCTCTGTCCCAGCA CCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTCCACGGAGGGAGGTCACAGCCCATC ACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGAAGGCACCTCTTCGGTCAAACATGG CCCCTCTATAACCCCACTATTCTTCTCCTATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGCCAAGTAGGCGCACTCTTTGTGATA TTGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTTCTAAAGTGAAAGGCATGGTTTGTCCTGCTTAGGTTGCCCTTCCCAGAGGGATG GTTTGAGGGGAGCTGATGAGAAGAGAGGTATCTGTTAAAACATTACTGCTCTACTCGAAACAAGATGGAAGCCTAAAGCCCAAGTCGAGC AGCTCCCAGCACTGCTGTGCAGACCTAGAGGTCCTTAGAACATAGTCTAAGAACCATTCATTGTAGCCATTTTATAGTTGAGTAAACTGA GATCTTAAGTCTCCTAGTCTACTGAATTTCATATGGTGTATAATACAGATTTATATGGTAAAGATATACATATACATTGTGCTCAACTAT ACATTCCTGAATCCATTTAGGATTTGTGATTTATGTCTTGAGTAATAATATAAAGTCAACTCCAGACTGATAGGTAGTCATTAGCCATGA GAAATGTTTCAGGATGGCTAGGGAAGACTTGTGTTTTGCCTGACAGCCATTTGAATGTTAGGAAGCTTCGGGGAGACAAGTTTTGAGAGA AGCCCCAGAGGGAGCTATTTCCTTGCACCCCCCAGAGGTGAATGAGGTATTCTATAAGTTAGTGTCTATAATTGTGAAAGTACAAACTTC TTGTTTTTGTCAAATTAATGGTATGAAATTTCTCTCCCCCTGCTTGAAGAGTTTTCTAATTCGTTTCTAGTGAGCAAAACAAAGAAGGTG CTTGAGTCACTGAAATCAAAGTACTCAGGCACACAGCCCACTGACAAGAGACACCTCATCCATTAACTGCTGTTTTGTACCACTTGCCGC CCTGTTTCTGTCAAATACCTAGTGAAAAAGGCCTAAACAATTGTAATGATATTATTTATTGGGCATTTTGTGCCATACATGGTGATGAGC AGTTTGCATATATTTATTTATGATCTTCTTAAAACCATTCCATGAAATAGGAACTGTAATTATCCCCAATTCTAAAAGAAAAAACTTAGT TTTAGAGAGTTAGTAATCTTTGCCTAAGGGTCACAAAGCACCTATGTGTAGAAGCTAGGGTTCAAGGCAGATCTGTGATTCCAGAAGCTG TTCTCTAAACCACTATGGAGAACTGCTTAGATTCATTGTCTATGGGTACATTTTATAAAAAGGCAGATTCTAGTTCAGTGTCATAAGGAA CTTTCTAGTAATTAGAGCTGATAAGAAAAGAATTCCCCAGGAGAAAATGGAAACACTATCCCAGCAATCTGAATTCCTTACTTGGGGAAT GTTGCTGAGGAGGTTCAGTGTGTGAATGGACTGAACCAGTTGGCCACTCTCTCAGATTCCCTCTTCATAAAGCTTCCGTGACTTCTAAAC CATCAGGTCGGTGCCATAAGAGATGCTCAAAAAAGCATGGTCAGGGCTTAGCAAGAATCCTTTTCCAGTGCAAATACGACCCTCATATTA TGTTTTGGCGAGTAGCCAGTCTTTCTTTAACATCAATCAACCGTAGCAATGTGGTCATCACGAAGTCTTCATTGACTCACTGGCTTGGAT TTTAGGGTTAGAAAATCTGAATGTTCTTATGTCCTTCCGTCTCACTTTACTAGAGTGCCCAAGTTGACTCATCCTTACTCACTCATTCCC TCAAAATATTTATTGAGCACCAACAATGTCACAAGCACTGTGCTAAACACTGTGGTGAAGTAGAACAATTGCTAATCATTTCCTGGGTTC CACTTACTCTTGATTTAAAAAAAAAAAAACAACAAAAGAGTTTGTGTGTGGCCAGGACTAAACAGCTGCTTCTTAATTTTTGAATTTTAA AACTAATCTATTTTATTTAAAAAAAATCAAGTACTTTGGAAGTGAATAAAGTAAGAGATAGCCTGTCTCACTTTCCAGAGGTAGCAGTCA CTAATACTGTGGTGAGTGATTTTACTCAAAGGAAATCACACTATTAAGCAGCTTGGTTTTGACATGTTATGTTGTGGTCATCTTTTCATG TCAATACATAGATTAATCTTTTATTTCAAATGTCTACATAAAATATCACTACCCACATAACCTATAATTTGTGTGGCCAGCAATTTATTG AACACTAAAATGTTTTAAGTTTTCTTATTGCTAACAATGTCACAGTGAACATTTATATATTCATTAAATCCTTTTCCTCATGTATCTTTG CACTCTTGTGCTAGTATGTCTATAGTGTGAATACATTCATAAATTTCTTGATCAAAGCTAGGTCAAAGTTACATTCATTTTAATTTTGGT ACATATCCATAAATTCTCCATAAAAGTAGGACCAACTTACATTACCACCAATAGTGTATGTGAGCCTTATTTTTATGTATGATAGGACTT TTTTTAGTCCAAATGTTCCTATAGATTTTCTGGGTTTTTTTTTTTTTTTTGTCCTTGGAAGAATAACCTTCCTTCCACCAAGTCCAAGAA CCTGAGATTTTTAATCATTAGGTTTTAGATTTCCTTTAGCAGCAGAGACTGACTTGCTGTATAGAGGGAAGTCAAGTAGTGACTAACTCA CTATATGTCAAACACATCATTACTCTTCTCTTTTCCTACTTTACATGTAATGGTTGCGAGGACCAACTTTCAAATGAGCTAACTTGGGTG AGACGTTCACTAAAGTACCAAGCACAATACAAATGCATCTTCGAGTTCTTTGGGCCTCACTTTCCCTATCTGAATAATAAGGATAGTAAT CCCTTGCCTTTTCTCAAACCAGTTCAACTCAGCAAACACTTCCTGAGCACCTGCTACATGCCAGGCAAAATGTGAAATTTGCATGCTATG AGGCTAAATGGTACTGATTCTCAAAACAAGGAGCTCATAGTCTAAAACCATTTTTCTTTCTTTTTTTTCCCCCTAAACAACCTCTTAAAG GGGTAAGAAGTTAGGGGGTTGTTTATTAAGAACCCCTGAAGAGCAACCCTTTACCACTCTCTTAAATTTGAAAAATTCCAAAATAATATT AACACCTCTTGACTAGAAAAGGAAAAAAAAGGAACATGCCGTATGAAGAGCCTCTCCAATAATAAATGCAAAGCAGCTGTCAAAATATAG AGTCAAGTGATACTTTCATAAAGTGTTTGCACAATTAGAAAATGTTATCCTTTTTCTCGGGAGAAATGGGACATTTTTATTTTCTCTGCT AAGTGAAATGCAACTTTTTGAAGAATCAACACGCTTGACATTTTTACAATGTACATAAAGAACTGAACTATTATTAAAACAACTTACACA CTCCATTGCTTATAACTTTTGAGAGAATGAAAAGAACCTTAAACAGAATGTGCCTGTGGAGCTTCGCTTTAGAAATGAAATACCCAAGGT GTTTTAACTACAACTGTCTACATGTAATAGTGTGTCTGCATAATGACTTTGTAAATATTAACTGCAATTCTGTATTTGCTTTCTTGATAT >In-frame_ENST00000575333_ENST00000376352_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=405AA_start in transcript=9_stop in transcript=1226 MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQA LRQQVQADSKGTVSFGDFVQVARNLFCLQLDEVNVGAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEKLLESDKQRKQL TEELQNVKQEAKAVVEETRALRSRIHLAEAAQRQAHGMEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEM ARKTFEASTEKLLHFVEAIQEVFSDNSTPLSNLSERRAVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTA -------------------------------------------------------------- >In-frame_ENST00000575333_ENST00000405898_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=1675nt_BP=231nt GGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCTACATTTGCTGGAGTT CAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAG AAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAA CACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGC TTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGAT GAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGTGGCCAGGGCAGAATTAGATGAAGAGCCAA TAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTTTTTCATGTGCAGGGCTATTCTTAAGGGACATCATG TTTTGCTAACGTAATTTGGAATTAATATTATTTTAGAGAGGAAAAAAACACACATATCCCAAATATACTGTAACATTTTTCTTCTCTTTT TTTGTTTGTTTGGTTTTTTGATTCTTGTTTTTGTTTTGTGTTTTTGAGACAGGGTCGCACTCTGTCGCCCAGGCTGGAGTGCAATACTGC AATCACGTCTCACTGCAGCCTCAACCTCCTGGGTTCAAGTGATTCTCCCACCTCAACCTCCCAAGTAACTGGGACAACATGTCCATGCCA CCATGCTCAACTAATTTTTTTTTAAATTTTTATTTTGTAGAGATGGTGTCTCACTATTTTGTTCAGACTGGTCTCAAACACCTGGGCTCA AATGACCCACCTACCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGTCTGGCCTTGATTCTCTTTATGTGGTTTCATT CTGTTTTTAGAAGAATATTACATTTAAATTATATCCTAATTTTTATAGAAAGCTATATTTTCCAAATCTTTAGGAAAAGCAACATAACTA CTTGATTTACCACTAATTCGTCATAGGCACATATTTTTAAAATTATTTTATTAAATAAGGTATAGTATATTGATAATTATTTAATTTTTA TTAAATAGAAAATATTTACACCAAAAGGAAAGAAAATTTGTTTTGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTT GCAAATATATTATTTATCTTTTCATAGATTTTTCTCTACACAGAAAATTATATTTTTTAAAAATAGGCAGGGCATGATGGCTGACACCTT TAATCGCAGTACTTTGGGAGGCTGAGGCAAGAGGATTACTTGAGCTCAGGAGTTTAACATCAGCCTGGGCAACATAGCAGGACCCCATCT CTACTATTTAAAACATAAAAACAAAAATAAATAAATATATGTATATGTGGGGACAGGGAGTATGTGAGAAATTTCTGTACTTTCCCTTCA >In-frame_ENST00000575333_ENST00000405898_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=172AA_start in transcript=9_stop in transcript=527 MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQA -------------------------------------------------------------- >In-frame_ENST00000575333_ENST00000434978_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=2176nt_BP=231nt GGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCTACATTTGCTGGAGTT CAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAG AAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAA CACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGC TTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGAT GAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGGAAGCCAAAGCTGTAGTTGAAGAAACAAGA GCCCTGCGTAGTCGGATTCATCTTGCTGAAGCTGCTCAGAGACAGGCACATGGAATGGAAATGGACTATGAAGAAGTGATCCGTCTGTTA GAGGCCAAGATTACAGAGCTAAAGGCTCAGCTTGCTGATTATTCTGACCAAAATAAAGAAAGTGTTCAGGATTTAAAAAAGAGAATCATG GTACTCGACTGCCAATTACGAAAATCAGAAATGGCTCGAAAAACTTTTGAGGCATCCACTGAAAAGCTTCTTCATTTTGTAGAGGCTATT CAAGAAGTATTTTCTGATAATTCTACTCCTTTATCAAATTTAAGTGAAAGAAGAGCTGTGTTAGCTTCTCAGACTTCCCTCACACCACTG GGAAGGAATGGACGTAGCATCCCAGCAACGCTGGCGCTTGAATCTAAGGAACTTGTTAAATCTGTTCGTGCCTTACTTGATATGGATTGT TTACCTTATGGGTGGGAGGAAGCTTACACAGCAGATGGAATCAAGTACTTCATCAATCATGTAACACAGACTACATCCTGGATCCATCCC GTGATGAGTGTCCTGAATCTATCTCGCTCAGAGGAGAATGAAGAGGATTGCTCTAGAGAACTCCCCAACCAGAAAAGTTGATGGTTTTCC TTAGGAAGTGGAGCTACATGGATGATGTGAGCAGAGACGCATAACATCCAATTCTGAGATGAAACAGTCTAAAATAGGAGTAAAGCATGC ACTACTTGTTGAAGTGTGAAATGGAGACTCTGGACTTTGGGTATTTTTGTAAAACTTTTGATATTTCTGTATACATTTAAAAAATCAATT GCCACTACAGTAGTTCCTTAAGAATAATCTAGTTATATTTTTTGAAATCACATATAATTAGACTTTATAATATATATACTTTTTCATATA TAATTAGATCTTTCTTTGTAATTTCATATGTAGTTCTTCATAGGGTCTCAGATACAATGGTTTTTATAATTGACATATTGAAAAAGTATA TGAACATAATGAAACACCTCATTTATTTGATAATTCACTAATGTTTTATATTCATATATTAGGAAAGTGAACTTAGCAAGCTTTTTGGAA TTTAAGGATCACATTTAGACATCTCATGGGCTGATGAATACAGCTGGTATCTTTGTGGAGCTTTCTAATTTACAAAATGCTTTGTAGACC CCATTGTCTTTAAACCATACAACATGCCCGTGAAGCTGATCTGGTGGGTATGTTTATTCTTGGTTTTCAGTAGGGAAATAGCAGTTCAGA GAGAGGAAGCTCTCTGTCCCAGCACCGAGACTCACTCCTAAGTCTTCTGATTCCATGAGCAGTCCCCCTTCCCCCATACCCTGCTGTCTC CACGGAGGGAGGTCACAGCCCATCACGCAGGACACTGTGATTGTGTTGATGCAGCTGGCTCCACAGCTGTGCATTCCACAGAGATTCAGA AGGCACCTCTTCGGTCAAACATGGCCCCTCTATAACCCCACTATTCTTCTCCTATAAACCCTTCCCCCTTCTCTGCACCCAAGCCTTCGC CAAGTAGGCGCACTCTTTGTGATATTGTTTCAGCAGACTTCTTTCAGCAGCTCGTGTTTTTCTAAAGTGAAAGGCATGGTTTGTCCTGCT >In-frame_ENST00000575333_ENST00000434978_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=383AA_start in transcript=9_stop in transcript=1160 MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQA LRQQVQADSKGTVSFGDFVQVARNLFCLQLDEVNVGAHEISNILDSQLLPCDSSEADEMERLKCERDDALKEVNTLKEAKAVVEETRALR SRIHLAEAAQRQAHGMEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEMARKTFEASTEKLLHFVEAIQEV FSDNSTPLSNLSERRAVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMS -------------------------------------------------------------- >In-frame_ENST00000575333_ENST00000398391_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(transcript)=1675nt_BP=231nt GGCGCTACCATGGCGTTTGGCAAGAGTCACCGGGATCCCTACGCGACCTCCGTGGGCCACCTCATAGAAAAGGCTACATTTGCTGGAGTT CAGACTGAAGATTGGGGCCAGTTCATGCACATCTGTGACATAATTAACACTACCCAGGATGGGCCAAAAGATGCAGTGAAAGCTTTGAAG AAAAGGATTTCCAAAAACTACAATCATAAAGAAATCCAACTTACCTTGTCAGCTCTAAATTATCTTGGTATTCAGCCCACAAAGGAACAA CACCAAGCCCTGAGACAGCAAGTACAAGCAGACTCAAAAGGGACAGTGTCTTTTGGAGATTTTGTCCAGGTTGCCAGAAACTTGTTTTGC TTGCAGTTGGATGAAGTAAATGTTGGTGCACATGAAATTTCCAATATATTAGATTCACAGCTTCTTCCTTGTGATTCTTCAGAAGCAGAT GAAATGGAAAGGCTCAAGTGTGAAAGAGATGATGCCTTGAAAGAAGTAAATACACTTAAGTGGCCAGGGCAGAATTAGATGAAGAGCCAA TAAAGCAAGTCGTGGCAATTTTGGATCCTGTGAGTTCTTTGGGAAATACATTTTTTTTCATGTGCAGGGCTATTCTTAAGGGACATCATG TTTTGCTAACGTAATTTGGAATTAATATTATTTTAGAGAGGAAAAAAACACACATATCCCAAATATACTGTAACATTTTTCTTCTCTTTT TTTGTTTGTTTGGTTTTTTGATTCTTGTTTTTGTTTTGTGTTTTTGAGACAGGGTCGCACTCTGTCGCCCAGGCTGGAGTGCAATACTGC AATCACGTCTCACTGCAGCCTCAACCTCCTGGGTTCAAGTGATTCTCCCACCTCAACCTCCCAAGTAACTGGGACAACATGTCCATGCCA CCATGCTCAACTAATTTTTTTTTAAATTTTTATTTTGTAGAGATGGTGTCTCACTATTTTGTTCAGACTGGTCTCAAACACCTGGGCTCA AATGACCCACCTACCTCAGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACCATGTCTGGCCTTGATTCTCTTTATGTGGTTTCATT CTGTTTTTAGAAGAATATTACATTTAAATTATATCCTAATTTTTATAGAAAGCTATATTTTCCAAATCTTTAGGAAAAGCAACATAACTA CTTGATTTACCACTAATTCGTCATAGGCACATATTTTTAAAATTATTTTATTAAATAAGGTATAGTATATTGATAATTATTTAATTTTTA TTAAATAGAAAATATTTACACCAAAAGGAAAGAAAATTTGTTTTGCTACCTTAGTTTTTATAATCTCAACCTCTAGAGGAAGCCATTGTT GCAAATATATTATTTATCTTTTCATAGATTTTTCTCTACACAGAAAATTATATTTTTTAAAAATAGGCAGGGCATGATGGCTGACACCTT TAATCGCAGTACTTTGGGAGGCTGAGGCAAGAGGATTACTTGAGCTCAGGAGTTTAACATCAGCCTGGGCAACATAGCAGGACCCCATCT CTACTATTTAAAACATAAAAACAAAAATAAATAAATATATGTATATGTGGGGACAGGGAGTATGTGAGAAATTTCTGTACTTTCCCTTCA >In-frame_ENST00000575333_ENST00000398391_TCGA-A2-A3Y0-01A_TOM1L1_chr17_52982928_+_STXBP4_chr17_53108529_length(amino acids)=172AA_start in transcript=9_stop in transcript=527 MAFGKSHRDPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQLTLSALNYLGIQPTKEQHQA -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for TOM1L1-STXBP4 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | TOM1L1 | chr17:52982928 | chr17:53108529 | ENST00000575882 | + | 3 | 16 | 392_395 | 74.0 | 578.3333333333334 | GRB2 |
Hgene | TOM1L1 | chr17:52982928 | chr17:53108529 | ENST00000575882 | + | 3 | 16 | 442_445 | 74.0 | 578.3333333333334 | PIK3R1 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for TOM1L1-STXBP4 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for TOM1L1-STXBP4 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | TOM1L1 | C0033578 | Prostatic Neoplasms | 1 | CTD_human |
Hgene | TOM1L1 | C0376358 | Malignant neoplasm of prostate | 1 | CTD_human |
Tgene | STXBP4 | C0006142 | Malignant neoplasm of breast | 1 | CTD_human |
Tgene | STXBP4 | C0678222 | Breast Carcinoma | 1 | CTD_human |
Tgene | STXBP4 | C1257931 | Mammary Neoplasms, Human | 1 | CTD_human |
Tgene | STXBP4 | C1458155 | Mammary Neoplasms | 1 | CTD_human |
Tgene | STXBP4 | C4704874 | Mammary Carcinoma, Human | 1 | CTD_human |