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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:TPD52-MRPS28 (FusionGDB2 ID:92643) |
Fusion Gene Summary for TPD52-MRPS28 |
Fusion gene summary |
Fusion gene information | Fusion gene name: TPD52-MRPS28 | Fusion gene ID: 92643 | Hgene | Tgene | Gene symbol | TPD52 | MRPS28 | Gene ID | 7163 | 60488 |
Gene name | tumor protein D52 | mitochondrial ribosomal protein S35 | |
Synonyms | D52|N8L|PC-1|PrLZ|hD52 | HDCMD11P|MDS023|MRP-S28|MRPS28 | |
Cytomap | 8q21.13 | 12p11.22 | |
Type of gene | protein-coding | protein-coding | |
Description | tumor protein D52prostate and colon associated proteinprostate leucine zipperprotein N8 | 28S ribosomal protein S35, mitochondrial28S ribosomal protein S28, mitochondrialMRP-S35S28mtS35mtmitochondrial ribosomal protein S28mitochondrial small ribosomal subunit protein mS35 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | Q9Y2Q9 | |
Ensembl transtripts involved in fusion gene | ENST00000537855, ENST00000379096, ENST00000518937, ENST00000519303, ENST00000517427, ENST00000520527, ENST00000448733, ENST00000379097, ENST00000523395, | ENST00000276585, ENST00000521434, ENST00000521605, ENST00000522987, | |
Fusion gene scores | * DoF score | 21 X 15 X 9=2835 | 7 X 5 X 9=315 |
# samples | 30 | 12 | |
** MAII score | log2(30/2835*10)=-3.24031432933371 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(12/315*10)=-1.39231742277876 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: TPD52 [Title/Abstract] AND MRPS28 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | TPD52(80950355)-MRPS28(80831383), # samples:12 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across TPD52 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across MRPS28 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BLCA | TCGA-HQ-A2OF-01A | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | BLCA | TCGA-2F-A9KO-01A | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | BLCA | TCGA-E7-A6ME-01A | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | BLCA | TCGA-CF-A1HS-01A | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
ChimerDB4 | BRCA | TCGA-D8-A1JL-01A | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
ChimerDB4 | BRCA | TCGA-BH-A204-01A | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | BRCA | TCGA-A2-A1FX-01A | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | BRCA | TCGA-BH-A18M-01A | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | BRCA | TCGA-AO-A128-01A | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | BRCA | TCGA-AO-A128-01A | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
ChimerDB4 | BRCA | TCGA-AO-A1KS-01A | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
ChimerDB4 | BRCA | TCGA-C8-A1HJ-01A | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
ChimerDB4 | BRCA | TCGA-C8-A1HJ-01A | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | BRCA | TCGA-E2-A14Y-01A | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
ChimerDB4 | BRCA | TCGA-A2-A0CT-01A | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | BRCA | TCGA-A2-A3Y0-01A | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | BRCA | TCGA-E9-A5FK-01A | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
ChimerDB4 | BRCA | TCGA-AN-A03Y-01A | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
ChimerDB4 | BRCA | TCGA-LL-A8F5-01A | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
ChimerDB4 | BRCA | TCGA-D8-A1JS-01A | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
ChimerDB4 | BRCA | TCGA-A2-A0ET-01A | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
ChimerDB4 | BRCA | TCGA-BH-A0AU-01A | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
ChimerDB4 | CESC | TCGA-DG-A2KH-01A | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | CESC | TCGA-R2-A69V-01A | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | CHOL | TCGA-W5-AA2T-01A | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
ChimerDB4 | CHOL | TCGA-W5-AA34-01A | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | COAD | TCGA-AA-3660-01A | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
ChimerDB4 | GBM | TCGA-06-5856-01A | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | GBM | TCGA-06-5416-01A | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | STAD | TCGA-BR-8058-01A | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
ChimerDB4 | THYM | TCGA-4V-A9QN | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | THYM | TCGA-4V-A9QN | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
ChimerDB4 | THYM | TCGA-XU-A936 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | UCEC | TCGA-B5-A1MW-01A | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
ChimerDB4 | UCEC | TCGA-B5-A1MW-01A | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | UCEC | TCGA-EY-A5W2-01A | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | UCEC | TCGA-BG-A3EW-01A | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | UCEC | TCGA-D1-A3DA-01A | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
ChimerDB4 | UCEC | TCGA-AJ-A3EJ-01A | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
Top |
Fusion Gene ORF analysis for TPD52-MRPS28 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000537855 | ENST00000276585 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000537855 | ENST00000521434 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000537855 | ENST00000521605 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000537855 | ENST00000522987 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000379096 | ENST00000276585 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000379096 | ENST00000521434 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
In-frame | ENST00000379096 | ENST00000521605 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
5CDS-intron | ENST00000379096 | ENST00000522987 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000518937 | ENST00000276585 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000518937 | ENST00000521434 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
In-frame | ENST00000518937 | ENST00000521605 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
5CDS-intron | ENST00000518937 | ENST00000522987 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000519303 | ENST00000276585 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000519303 | ENST00000521434 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000519303 | ENST00000521605 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000519303 | ENST00000522987 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000517427 | ENST00000276585 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000517427 | ENST00000521434 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000517427 | ENST00000521605 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000517427 | ENST00000522987 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000520527 | ENST00000276585 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000520527 | ENST00000521434 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000520527 | ENST00000521605 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000520527 | ENST00000522987 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000448733 | ENST00000276585 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000448733 | ENST00000521434 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000448733 | ENST00000521605 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000448733 | ENST00000522987 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000379097 | ENST00000276585 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000379097 | ENST00000521434 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000379097 | ENST00000521605 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000379097 | ENST00000522987 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000523395 | ENST00000276585 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000523395 | ENST00000521434 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000523395 | ENST00000521605 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000523395 | ENST00000522987 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000537855 | ENST00000276585 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000537855 | ENST00000521434 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000537855 | ENST00000521605 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000537855 | ENST00000522987 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000379096 | ENST00000276585 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000379096 | ENST00000521434 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000379096 | ENST00000521605 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000379096 | ENST00000522987 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000518937 | ENST00000276585 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000518937 | ENST00000521434 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000518937 | ENST00000521605 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000518937 | ENST00000522987 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000519303 | ENST00000276585 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000519303 | ENST00000521434 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000519303 | ENST00000521605 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000519303 | ENST00000522987 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000517427 | ENST00000276585 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000517427 | ENST00000521434 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000517427 | ENST00000521605 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000517427 | ENST00000522987 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000520527 | ENST00000276585 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000520527 | ENST00000521434 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000520527 | ENST00000521605 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000520527 | ENST00000522987 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000448733 | ENST00000276585 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000448733 | ENST00000521434 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000448733 | ENST00000521605 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000448733 | ENST00000522987 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000379097 | ENST00000276585 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000379097 | ENST00000521434 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000379097 | ENST00000521605 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000379097 | ENST00000522987 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000523395 | ENST00000276585 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000523395 | ENST00000521434 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000523395 | ENST00000521605 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000523395 | ENST00000522987 | TPD52 | chr8 | 80950355 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000537855 | ENST00000276585 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
Frame-shift | ENST00000537855 | ENST00000521434 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
In-frame | ENST00000537855 | ENST00000521605 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
5CDS-intron | ENST00000537855 | ENST00000522987 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
Frame-shift | ENST00000379096 | ENST00000276585 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
Frame-shift | ENST00000379096 | ENST00000521434 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
In-frame | ENST00000379096 | ENST00000521605 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
5CDS-intron | ENST00000379096 | ENST00000522987 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
Frame-shift | ENST00000518937 | ENST00000276585 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
Frame-shift | ENST00000518937 | ENST00000521434 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
In-frame | ENST00000518937 | ENST00000521605 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
5CDS-intron | ENST00000518937 | ENST00000522987 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
In-frame | ENST00000519303 | ENST00000276585 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
Frame-shift | ENST00000519303 | ENST00000521434 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
Frame-shift | ENST00000519303 | ENST00000521605 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
5CDS-intron | ENST00000519303 | ENST00000522987 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
Frame-shift | ENST00000517427 | ENST00000276585 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
Frame-shift | ENST00000517427 | ENST00000521434 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
In-frame | ENST00000517427 | ENST00000521605 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
5CDS-intron | ENST00000517427 | ENST00000522987 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
Frame-shift | ENST00000520527 | ENST00000276585 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
Frame-shift | ENST00000520527 | ENST00000521434 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
In-frame | ENST00000520527 | ENST00000521605 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
5CDS-intron | ENST00000520527 | ENST00000522987 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
Frame-shift | ENST00000448733 | ENST00000276585 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
Frame-shift | ENST00000448733 | ENST00000521434 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
In-frame | ENST00000448733 | ENST00000521605 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
5CDS-intron | ENST00000448733 | ENST00000522987 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
Frame-shift | ENST00000379097 | ENST00000276585 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
Frame-shift | ENST00000379097 | ENST00000521434 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
In-frame | ENST00000379097 | ENST00000521605 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
5CDS-intron | ENST00000379097 | ENST00000522987 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
5UTR-3CDS | ENST00000523395 | ENST00000276585 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
5UTR-3CDS | ENST00000523395 | ENST00000521434 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
5UTR-3CDS | ENST00000523395 | ENST00000521605 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
5UTR-intron | ENST00000523395 | ENST00000522987 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - |
Frame-shift | ENST00000537855 | ENST00000276585 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
Frame-shift | ENST00000537855 | ENST00000521434 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
In-frame | ENST00000537855 | ENST00000521605 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
5CDS-intron | ENST00000537855 | ENST00000522987 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
Frame-shift | ENST00000379096 | ENST00000276585 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
Frame-shift | ENST00000379096 | ENST00000521434 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
In-frame | ENST00000379096 | ENST00000521605 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
5CDS-intron | ENST00000379096 | ENST00000522987 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
Frame-shift | ENST00000518937 | ENST00000276585 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
Frame-shift | ENST00000518937 | ENST00000521434 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
In-frame | ENST00000518937 | ENST00000521605 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
5CDS-intron | ENST00000518937 | ENST00000522987 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
In-frame | ENST00000519303 | ENST00000276585 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
Frame-shift | ENST00000519303 | ENST00000521434 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
Frame-shift | ENST00000519303 | ENST00000521605 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
5CDS-intron | ENST00000519303 | ENST00000522987 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
Frame-shift | ENST00000517427 | ENST00000276585 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
Frame-shift | ENST00000517427 | ENST00000521434 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
In-frame | ENST00000517427 | ENST00000521605 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
5CDS-intron | ENST00000517427 | ENST00000522987 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
Frame-shift | ENST00000520527 | ENST00000276585 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
Frame-shift | ENST00000520527 | ENST00000521434 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
In-frame | ENST00000520527 | ENST00000521605 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
5CDS-intron | ENST00000520527 | ENST00000522987 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
Frame-shift | ENST00000448733 | ENST00000276585 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
Frame-shift | ENST00000448733 | ENST00000521434 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
In-frame | ENST00000448733 | ENST00000521605 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
5CDS-intron | ENST00000448733 | ENST00000522987 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
Frame-shift | ENST00000379097 | ENST00000276585 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
Frame-shift | ENST00000379097 | ENST00000521434 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
In-frame | ENST00000379097 | ENST00000521605 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
5CDS-intron | ENST00000379097 | ENST00000522987 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
5UTR-3CDS | ENST00000523395 | ENST00000276585 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
5UTR-3CDS | ENST00000523395 | ENST00000521434 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
5UTR-3CDS | ENST00000523395 | ENST00000521605 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
5UTR-intron | ENST00000523395 | ENST00000522987 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - |
In-frame | ENST00000537855 | ENST00000276585 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000537855 | ENST00000521434 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000537855 | ENST00000521605 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
5CDS-intron | ENST00000537855 | ENST00000522987 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
In-frame | ENST00000379096 | ENST00000276585 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000379096 | ENST00000521434 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000379096 | ENST00000521605 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
5CDS-intron | ENST00000379096 | ENST00000522987 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
In-frame | ENST00000518937 | ENST00000276585 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000518937 | ENST00000521434 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000518937 | ENST00000521605 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
5CDS-intron | ENST00000518937 | ENST00000522987 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
5UTR-3CDS | ENST00000519303 | ENST00000276585 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
5UTR-3CDS | ENST00000519303 | ENST00000521434 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
5UTR-3CDS | ENST00000519303 | ENST00000521605 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
5UTR-intron | ENST00000519303 | ENST00000522987 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
In-frame | ENST00000517427 | ENST00000276585 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000517427 | ENST00000521434 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000517427 | ENST00000521605 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
5CDS-intron | ENST00000517427 | ENST00000522987 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
In-frame | ENST00000520527 | ENST00000276585 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000520527 | ENST00000521434 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000520527 | ENST00000521605 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
5CDS-intron | ENST00000520527 | ENST00000522987 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
In-frame | ENST00000448733 | ENST00000276585 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000448733 | ENST00000521434 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000448733 | ENST00000521605 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
5CDS-intron | ENST00000448733 | ENST00000522987 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
In-frame | ENST00000379097 | ENST00000276585 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000379097 | ENST00000521434 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000379097 | ENST00000521605 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
5CDS-intron | ENST00000379097 | ENST00000522987 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000523395 | ENST00000276585 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000523395 | ENST00000521434 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000523395 | ENST00000521605 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000523395 | ENST00000522987 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000537855 | ENST00000276585 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000537855 | ENST00000521434 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
In-frame | ENST00000537855 | ENST00000521605 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
5CDS-intron | ENST00000537855 | ENST00000522987 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000379096 | ENST00000276585 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000379096 | ENST00000521434 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
In-frame | ENST00000379096 | ENST00000521605 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
5CDS-intron | ENST00000379096 | ENST00000522987 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000518937 | ENST00000276585 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000518937 | ENST00000521434 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
In-frame | ENST00000518937 | ENST00000521605 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
5CDS-intron | ENST00000518937 | ENST00000522987 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
5UTR-3CDS | ENST00000519303 | ENST00000276585 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
5UTR-3CDS | ENST00000519303 | ENST00000521434 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
5UTR-3CDS | ENST00000519303 | ENST00000521605 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
5UTR-intron | ENST00000519303 | ENST00000522987 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000517427 | ENST00000276585 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000517427 | ENST00000521434 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
In-frame | ENST00000517427 | ENST00000521605 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
5CDS-intron | ENST00000517427 | ENST00000522987 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000520527 | ENST00000276585 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000520527 | ENST00000521434 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
In-frame | ENST00000520527 | ENST00000521605 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
5CDS-intron | ENST00000520527 | ENST00000522987 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000448733 | ENST00000276585 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000448733 | ENST00000521434 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
In-frame | ENST00000448733 | ENST00000521605 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
5CDS-intron | ENST00000448733 | ENST00000522987 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000379097 | ENST00000276585 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
Frame-shift | ENST00000379097 | ENST00000521434 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
In-frame | ENST00000379097 | ENST00000521605 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
5CDS-intron | ENST00000379097 | ENST00000522987 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000523395 | ENST00000276585 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000523395 | ENST00000521434 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
intron-3CDS | ENST00000523395 | ENST00000521605 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
intron-intron | ENST00000523395 | ENST00000522987 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000379096 | TPD52 | chr8 | 81083660 | - | ENST00000521605 | MRPS28 | chr8 | 80831383 | - | 317 | 134 | 154 | 2 | 51 |
ENST00000518937 | TPD52 | chr8 | 81083660 | - | ENST00000521605 | MRPS28 | chr8 | 80831383 | - | 418 | 235 | 20 | 403 | 127 |
ENST00000537855 | TPD52 | chr8 | 80954854 | - | ENST00000521605 | MRPS28 | chr8 | 80831382 | - | 1060 | 877 | 307 | 924 | 205 |
ENST00000379096 | TPD52 | chr8 | 80954854 | - | ENST00000521605 | MRPS28 | chr8 | 80831382 | - | 733 | 550 | 115 | 597 | 160 |
ENST00000518937 | TPD52 | chr8 | 80954854 | - | ENST00000521605 | MRPS28 | chr8 | 80831382 | - | 903 | 720 | 84 | 767 | 227 |
ENST00000519303 | TPD52 | chr8 | 80954854 | - | ENST00000276585 | MRPS28 | chr8 | 80831382 | - | 1097 | 665 | 182 | 712 | 176 |
ENST00000517427 | TPD52 | chr8 | 80954854 | - | ENST00000521605 | MRPS28 | chr8 | 80831382 | - | 1128 | 945 | 348 | 992 | 214 |
ENST00000520527 | TPD52 | chr8 | 80954854 | - | ENST00000521605 | MRPS28 | chr8 | 80831382 | - | 1170 | 987 | 348 | 1034 | 228 |
ENST00000448733 | TPD52 | chr8 | 80954854 | - | ENST00000521605 | MRPS28 | chr8 | 80831382 | - | 1143 | 960 | 348 | 1007 | 219 |
ENST00000379097 | TPD52 | chr8 | 80954854 | - | ENST00000521605 | MRPS28 | chr8 | 80831382 | - | 1101 | 918 | 348 | 965 | 205 |
ENST00000537855 | TPD52 | chr8 | 80954857 | - | ENST00000521605 | MRPS28 | chr8 | 80831385 | - | 1060 | 877 | 307 | 924 | 205 |
ENST00000379096 | TPD52 | chr8 | 80954857 | - | ENST00000521605 | MRPS28 | chr8 | 80831385 | - | 733 | 550 | 115 | 597 | 160 |
ENST00000518937 | TPD52 | chr8 | 80954857 | - | ENST00000521605 | MRPS28 | chr8 | 80831385 | - | 903 | 720 | 84 | 767 | 227 |
ENST00000519303 | TPD52 | chr8 | 80954857 | - | ENST00000276585 | MRPS28 | chr8 | 80831385 | - | 1097 | 665 | 182 | 712 | 176 |
ENST00000517427 | TPD52 | chr8 | 80954857 | - | ENST00000521605 | MRPS28 | chr8 | 80831385 | - | 1128 | 945 | 348 | 992 | 214 |
ENST00000520527 | TPD52 | chr8 | 80954857 | - | ENST00000521605 | MRPS28 | chr8 | 80831385 | - | 1170 | 987 | 348 | 1034 | 228 |
ENST00000448733 | TPD52 | chr8 | 80954857 | - | ENST00000521605 | MRPS28 | chr8 | 80831385 | - | 1143 | 960 | 348 | 1007 | 219 |
ENST00000379097 | TPD52 | chr8 | 80954857 | - | ENST00000521605 | MRPS28 | chr8 | 80831385 | - | 1101 | 918 | 348 | 965 | 205 |
ENST00000537855 | TPD52 | chr8 | 80963762 | - | ENST00000276585 | MRPS28 | chr8 | 80831383 | - | 1260 | 828 | 307 | 996 | 229 |
ENST00000379096 | TPD52 | chr8 | 80963762 | - | ENST00000276585 | MRPS28 | chr8 | 80831383 | - | 933 | 501 | 115 | 669 | 184 |
ENST00000518937 | TPD52 | chr8 | 80963762 | - | ENST00000276585 | MRPS28 | chr8 | 80831383 | - | 1034 | 602 | 84 | 770 | 228 |
ENST00000517427 | TPD52 | chr8 | 80963762 | - | ENST00000276585 | MRPS28 | chr8 | 80831383 | - | 1301 | 869 | 348 | 1037 | 229 |
ENST00000520527 | TPD52 | chr8 | 80963762 | - | ENST00000276585 | MRPS28 | chr8 | 80831383 | - | 1301 | 869 | 348 | 1037 | 229 |
ENST00000448733 | TPD52 | chr8 | 80963762 | - | ENST00000276585 | MRPS28 | chr8 | 80831383 | - | 1301 | 869 | 348 | 1037 | 229 |
ENST00000379097 | TPD52 | chr8 | 80963762 | - | ENST00000276585 | MRPS28 | chr8 | 80831383 | - | 1301 | 869 | 348 | 1037 | 229 |
ENST00000537855 | TPD52 | chr8 | 80976713 | - | ENST00000521605 | MRPS28 | chr8 | 80831383 | - | 760 | 577 | 307 | 624 | 105 |
ENST00000379096 | TPD52 | chr8 | 80976713 | - | ENST00000521605 | MRPS28 | chr8 | 80831383 | - | 433 | 250 | 222 | 1 | 74 |
ENST00000518937 | TPD52 | chr8 | 80976713 | - | ENST00000521605 | MRPS28 | chr8 | 80831383 | - | 534 | 351 | 84 | 398 | 104 |
ENST00000517427 | TPD52 | chr8 | 80976713 | - | ENST00000521605 | MRPS28 | chr8 | 80831383 | - | 801 | 618 | 348 | 665 | 105 |
ENST00000520527 | TPD52 | chr8 | 80976713 | - | ENST00000521605 | MRPS28 | chr8 | 80831383 | - | 801 | 618 | 348 | 665 | 105 |
ENST00000448733 | TPD52 | chr8 | 80976713 | - | ENST00000521605 | MRPS28 | chr8 | 80831383 | - | 801 | 618 | 348 | 665 | 105 |
ENST00000379097 | TPD52 | chr8 | 80976713 | - | ENST00000521605 | MRPS28 | chr8 | 80831383 | - | 801 | 618 | 348 | 665 | 105 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000379096 | ENST00000521605 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - | 0.23989874 | 0.76010126 |
ENST00000518937 | ENST00000521605 | TPD52 | chr8 | 81083660 | - | MRPS28 | chr8 | 80831383 | - | 0.39953142 | 0.6004686 |
ENST00000537855 | ENST00000521605 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - | 0.001499631 | 0.99850035 |
ENST00000379096 | ENST00000521605 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - | 0.001457264 | 0.9985428 |
ENST00000518937 | ENST00000521605 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - | 0.001047791 | 0.99895215 |
ENST00000519303 | ENST00000276585 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - | 0.42244133 | 0.5775587 |
ENST00000517427 | ENST00000521605 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - | 0.001454945 | 0.99854505 |
ENST00000520527 | ENST00000521605 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - | 0.001184279 | 0.9988158 |
ENST00000448733 | ENST00000521605 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - | 0.001633783 | 0.9983662 |
ENST00000379097 | ENST00000521605 | TPD52 | chr8 | 80954854 | - | MRPS28 | chr8 | 80831382 | - | 0.001728784 | 0.9982712 |
ENST00000537855 | ENST00000521605 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - | 0.001499631 | 0.99850035 |
ENST00000379096 | ENST00000521605 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - | 0.001457264 | 0.9985428 |
ENST00000518937 | ENST00000521605 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - | 0.001047791 | 0.99895215 |
ENST00000519303 | ENST00000276585 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - | 0.42244133 | 0.5775587 |
ENST00000517427 | ENST00000521605 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - | 0.001454945 | 0.99854505 |
ENST00000520527 | ENST00000521605 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - | 0.001184279 | 0.9988158 |
ENST00000448733 | ENST00000521605 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - | 0.001633783 | 0.9983662 |
ENST00000379097 | ENST00000521605 | TPD52 | chr8 | 80954857 | - | MRPS28 | chr8 | 80831385 | - | 0.001728784 | 0.9982712 |
ENST00000537855 | ENST00000276585 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - | 0.0017678 | 0.9982322 |
ENST00000379096 | ENST00000276585 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - | 0.001850607 | 0.9981494 |
ENST00000518937 | ENST00000276585 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - | 0.001702005 | 0.998298 |
ENST00000517427 | ENST00000276585 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - | 0.00220126 | 0.99779874 |
ENST00000520527 | ENST00000276585 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - | 0.00220126 | 0.99779874 |
ENST00000448733 | ENST00000276585 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - | 0.00220126 | 0.99779874 |
ENST00000379097 | ENST00000276585 | TPD52 | chr8 | 80963762 | - | MRPS28 | chr8 | 80831383 | - | 0.00220126 | 0.99779874 |
ENST00000537855 | ENST00000521605 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - | 0.01775087 | 0.98224914 |
ENST00000379096 | ENST00000521605 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - | 0.042621985 | 0.957378 |
ENST00000518937 | ENST00000521605 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - | 0.033610977 | 0.96638894 |
ENST00000517427 | ENST00000521605 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - | 0.01789292 | 0.9821071 |
ENST00000520527 | ENST00000521605 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - | 0.01789292 | 0.9821071 |
ENST00000448733 | ENST00000521605 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - | 0.01789292 | 0.9821071 |
ENST00000379097 | ENST00000521605 | TPD52 | chr8 | 80976713 | - | MRPS28 | chr8 | 80831383 | - | 0.01789292 | 0.9821071 |
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Fusion Genomic Features for TPD52-MRPS28 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for TPD52-MRPS28 |
Go to FGviewer for the breakpoints of chr8:81083660-chr8:80831383 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | MRPS28 |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TPD52 | chr8:80954854 | chr8:80831382 | ENST00000379096 | - | 5 | 6 | 62_114 | 145.0 | 185.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80954854 | chr8:80831382 | ENST00000379097 | - | 5 | 6 | 62_114 | 185.0 | 225.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80954854 | chr8:80831382 | ENST00000448733 | - | 6 | 7 | 62_114 | 199.0 | 239.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80954854 | chr8:80831382 | ENST00000517427 | - | 6 | 7 | 62_114 | 194.0 | 234.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80954854 | chr8:80831382 | ENST00000518937 | - | 7 | 8 | 62_114 | 168.0 | 208.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80954854 | chr8:80831382 | ENST00000520527 | - | 7 | 8 | 62_114 | 208.0 | 248.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80954857 | chr8:80831385 | ENST00000379096 | - | 5 | 6 | 62_114 | 145.0 | 185.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80954857 | chr8:80831385 | ENST00000379097 | - | 5 | 6 | 62_114 | 185.0 | 225.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80954857 | chr8:80831385 | ENST00000448733 | - | 6 | 7 | 62_114 | 199.0 | 239.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80954857 | chr8:80831385 | ENST00000517427 | - | 6 | 7 | 62_114 | 194.0 | 234.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80954857 | chr8:80831385 | ENST00000518937 | - | 7 | 8 | 62_114 | 168.0 | 208.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80954857 | chr8:80831385 | ENST00000520527 | - | 7 | 8 | 62_114 | 208.0 | 248.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80963762 | chr8:80831383 | ENST00000379096 | - | 4 | 6 | 62_114 | 128.66666666666666 | 185.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80963762 | chr8:80831383 | ENST00000379097 | - | 4 | 6 | 62_114 | 168.66666666666666 | 225.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80963762 | chr8:80831383 | ENST00000448733 | - | 4 | 7 | 62_114 | 168.66666666666666 | 239.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80963762 | chr8:80831383 | ENST00000517427 | - | 4 | 7 | 62_114 | 168.66666666666666 | 234.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80963762 | chr8:80831383 | ENST00000518937 | - | 4 | 8 | 62_114 | 128.66666666666666 | 208.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80963762 | chr8:80831383 | ENST00000520527 | - | 4 | 8 | 62_114 | 168.66666666666666 | 248.0 | Coiled coil | Ontology_term=ECO:0000255 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TPD52 | chr8:80976713 | chr8:80831383 | ENST00000379096 | - | 2 | 6 | 62_114 | 45.0 | 185.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80976713 | chr8:80831383 | ENST00000379097 | - | 2 | 6 | 62_114 | 85.0 | 225.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80976713 | chr8:80831383 | ENST00000448733 | - | 2 | 7 | 62_114 | 85.0 | 239.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80976713 | chr8:80831383 | ENST00000517427 | - | 2 | 7 | 62_114 | 85.0 | 234.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80976713 | chr8:80831383 | ENST00000518937 | - | 2 | 8 | 62_114 | 45.0 | 208.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:80976713 | chr8:80831383 | ENST00000520527 | - | 2 | 8 | 62_114 | 85.0 | 248.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:81083660 | chr8:80831383 | ENST00000379096 | - | 1 | 6 | 62_114 | 6.333333333333333 | 185.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:81083660 | chr8:80831383 | ENST00000379097 | - | 1 | 6 | 62_114 | 0 | 225.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:81083660 | chr8:80831383 | ENST00000448733 | - | 1 | 7 | 62_114 | 0 | 239.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:81083660 | chr8:80831383 | ENST00000517427 | - | 1 | 7 | 62_114 | 0 | 234.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:81083660 | chr8:80831383 | ENST00000518937 | - | 1 | 8 | 62_114 | 6.333333333333333 | 208.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TPD52 | chr8:81083660 | chr8:80831383 | ENST00000520527 | - | 1 | 8 | 62_114 | 0 | 248.0 | Coiled coil | Ontology_term=ECO:0000255 |
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Fusion Gene Sequence for TPD52-MRPS28 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000379096_ENST00000521605_TCGA-HQ-A2OF-01A_TPD52_chr8_81083660_-_MRPS28_chr8_80831383_length(transcript)=317nt_BP=134nt GCGGGAGTCGCCGGCGGAGGCGAGGAGGAGCTCTGCGCGGCGCGGCGGGCGATCCGAGCCGGGACGGGCTGCAGGCGGGGGTGCTGCAGA GGACACGAGGCGGCGGGCTGGAGACATGGACCGCGGCGAGCAAGGAAATACCAGAAAGGAACCAGGGTCCGGTTGCGGCTATTAGATCTT GAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGAC >In-frame_ENST00000379096_ENST00000521605_TCGA-HQ-A2OF-01A_TPD52_chr8_81083660_-_MRPS28_chr8_80831383_length(amino acids)=51AA_start in transcript=154_stop in transcript=2 -------------------------------------------------------------- >In-frame_ENST00000518937_ENST00000521605_TCGA-HQ-A2OF-01A_TPD52_chr8_81083660_-_MRPS28_chr8_80831383_length(transcript)=418nt_BP=235nt AGGTCGACCGGGTCAGGTGGTTGGGTGACGCCCCAGGAAAGCGCTCCAGGCCGAGGGCGGGCGGCGCCGCCGCGCCCGACGCCTCTGGGG GTGGGGACTTCGCGGGAGTCGCCGGCGGAGGCGAGGAGGAGCTCTGCGCGGCGCGGCGGGCGATCCGAGCCGGGACGGGCTGCAGGCGGG GGTGCTGCAGAGGACACGAGGCGGCGGGCTGGAGACATGGACCGCGGCGAGCAAGGAAATACCAGAAAGGAACCAGGGTCCGGTTGCGGC TATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATCCAGG >In-frame_ENST00000518937_ENST00000521605_TCGA-HQ-A2OF-01A_TPD52_chr8_81083660_-_MRPS28_chr8_80831383_length(amino acids)=127AA_start in transcript=20_stop in transcript=403 MGDAPGKRSRPRAGGAAAPDASGGGDFAGVAGGGEEELCAARRAIRAGTGCRRGCCRGHEAAGWRHGPRRARKYQKGTRVRLRLLDLELT -------------------------------------------------------------- >In-frame_ENST00000537855_ENST00000521605_TCGA-CF-A1HS-01A_TPD52_chr8_80954854_-_MRPS28_chr8_80831382_length(transcript)=1060nt_BP=877nt GCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCATTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCT CCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAGGAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGG GCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAGTTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAAC TGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCTGGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCA GTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTGTCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCT TCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAAGATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGA AGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAAATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCA TCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTAAAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAAC ATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAGGCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAA AAAGCTGGAAGATGTAAAAAACTCCCCAACTTTTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAGGAAATACCAGAAAGGAACCAGGG TCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCT >In-frame_ENST00000537855_ENST00000521605_TCGA-CF-A1HS-01A_TPD52_chr8_80954854_-_MRPS28_chr8_80831382_length(amino acids)=205AA_start in transcript=307_stop in transcript=924 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK VEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKNSPTFK -------------------------------------------------------------- >In-frame_ENST00000379096_ENST00000521605_TCGA-CF-A1HS-01A_TPD52_chr8_80954854_-_MRPS28_chr8_80831382_length(transcript)=733nt_BP=550nt GCGGGAGTCGCCGGCGGAGGCGAGGAGGAGCTCTGCGCGGCGCGGCGGGCGATCCGAGCCGGGACGGGCTGCAGGCGGGGGTGCTGCAGA GGACACGAGGCGGCGGGCTGGAGACATGGACCGCGGCGAGCAAGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAAGATGTTGC TGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAAATCCAGAC TCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTAAAACAGAA CATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAGGCCTCAGC TGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAAAACTCCCCAACTTTTAAATCATTTGAAGAAAAGGTCGA AAACTTAAAGGAAATACCAGAAAGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAG ATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGAAAAATAAA >In-frame_ENST00000379096_ENST00000521605_TCGA-CF-A1HS-01A_TPD52_chr8_80954854_-_MRPS28_chr8_80831382_length(amino acids)=160AA_start in transcript=115_stop in transcript=597 MDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDV -------------------------------------------------------------- >In-frame_ENST00000518937_ENST00000521605_TCGA-CF-A1HS-01A_TPD52_chr8_80954854_-_MRPS28_chr8_80831382_length(transcript)=903nt_BP=720nt AGGTCGACCGGGTCAGGTGGTTGGGTGACGCCCCAGGAAAGCGCTCCAGGCCGAGGGCGGGCGGCGCCGCCGCGCCCGACGCCTCTGGGG GTGGGGACTTCGCGGGAGTCGCCGGCGGAGGCGAGGAGGAGCTCTGCGCGGCGCGGCGGGCGATCCGAGCCGGGACGGGCTGCAGGCGGG GGTGCTGCAGAGGACACGAGGCGGCGGGCTGGAGACATGGACCGCGGCGAGCAAGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGA GAAGATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAA GAAATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAA CTAAAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAG AAGGCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAATTGCAAGCCTTTTCACATTCCTTTAGT ATACGTTCCATTCAGCATTCAATTAGCATGCCTGCTATGAGAAACTCCCCAACTTTTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAG GAAATACCAGAAAGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGT ACTAGAGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGAAAAATAAATGAACTTTGC >In-frame_ENST00000518937_ENST00000521605_TCGA-CF-A1HS-01A_TPD52_chr8_80954854_-_MRPS28_chr8_80831382_length(amino acids)=227AA_start in transcript=84_stop in transcript=767 MGVGTSRESPAEARRSSARRGGRSEPGRAAGGGAAEDTRRRAGDMDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKV EEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKLQAFSHS -------------------------------------------------------------- >In-frame_ENST00000519303_ENST00000276585_TCGA-CF-A1HS-01A_TPD52_chr8_80954854_-_MRPS28_chr8_80831382_length(transcript)=1097nt_BP=665nt GTGCGTGTGTGGGGGAGAGGGAGAGAAGGTTCTGGGAGGTGGCGAAGGGGCTAGCGTCAGGGGCTGGCGGCCGTGATGCGCTTTGGGTGG AAAGCCGCGTGAAGGGAGCACGGCGCAGCCAGCTCCTGTAAGTGACTGGAACCAGGAACAGAGGACAGTGAGTCGCTCTCGTCCCTCCAG GTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAAGATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGG AAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAAATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGA TCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTAAAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACA AGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAGGCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAG ATGTAAAATTGCAAGCCTTTTCACATTCCTTTAGTATACGTTCCATTCAGCATTCAATTAGCATGCCTGCTATGAGAAACTCCCCAACTT TTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAGGAAATACCAGAAAGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTACG TCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCG AAAGAAGAACATCATGAAAAATAAATGAACTTTGCTTAGTGGATTGACTCCTTTGCTGAAGTCAGTTATTCATCAAGAATGCAATTAGAC TAATTGTGAATAAATGATTGAATGAAGATATAATAAATAAAAGCTATAATTATAGATAACTCTTATTAGAATTTTCTTTAGCAATATTCC CACCCCCCACCCCTTGTTTTGCTCTTAATGTTTTTTTCCTTTGGTGGGGATAGTATACACTGTACTAAGAAATTGTCATTCAATAAATAC >In-frame_ENST00000519303_ENST00000276585_TCGA-CF-A1HS-01A_TPD52_chr8_80954854_-_MRPS28_chr8_80831382_length(amino acids)=176AA_start in transcript=182_stop in transcript=712 MLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYK -------------------------------------------------------------- >In-frame_ENST00000517427_ENST00000521605_TCGA-CF-A1HS-01A_TPD52_chr8_80954854_-_MRPS28_chr8_80831382_length(transcript)=1128nt_BP=945nt GCCTGAACTGTTTGTACCTCTGGGCCATATTGCAGAACCCTGCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCA TTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCTCCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAG GAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGGGCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAG TTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAACTGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCT GGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCAGTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTG TCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCTTCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAA GATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAA ATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTA AAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAG GCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAATTGCAAGCCTTTTCACATTCCTTTAGAAAC TCCCCAACTTTTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAGGAAATACCAGAAAGGAACCAGGGTCCGGTTGCGGCTATTAGATCT TGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGA >In-frame_ENST00000517427_ENST00000521605_TCGA-CF-A1HS-01A_TPD52_chr8_80954854_-_MRPS28_chr8_80831382_length(amino acids)=214AA_start in transcript=348_stop in transcript=992 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK VEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKLQAFSH -------------------------------------------------------------- >In-frame_ENST00000520527_ENST00000521605_TCGA-CF-A1HS-01A_TPD52_chr8_80954854_-_MRPS28_chr8_80831382_length(transcript)=1170nt_BP=987nt GCCTGAACTGTTTGTACCTCTGGGCCATATTGCAGAACCCTGCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCA TTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCTCCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAG GAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGGGCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAG TTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAACTGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCT GGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCAGTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTG TCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCTTCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAA GATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAA ATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTA AAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAG GCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAATTGCAAGCCTTTTCACATTCCTTTAGTATA CGTTCCATTCAGCATTCAATTAGCATGCCTGCTATGAGAAACTCCCCAACTTTTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAGGAA ATACCAGAAAGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACT AGAGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGAAAAATAAATGAACTTTGCTTA >In-frame_ENST00000520527_ENST00000521605_TCGA-CF-A1HS-01A_TPD52_chr8_80954854_-_MRPS28_chr8_80831382_length(amino acids)=228AA_start in transcript=348_stop in transcript=1034 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK VEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKLQAFSH -------------------------------------------------------------- >In-frame_ENST00000448733_ENST00000521605_TCGA-CF-A1HS-01A_TPD52_chr8_80954854_-_MRPS28_chr8_80831382_length(transcript)=1143nt_BP=960nt GCCTGAACTGTTTGTACCTCTGGGCCATATTGCAGAACCCTGCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCA TTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCTCCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAG GAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGGGCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAG TTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAACTGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCT GGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCAGTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTG TCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCTTCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAA GATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAA ATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTA AAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAG GCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAATATACGTTCCATTCAGCATTCAATTAGCATG CCTGCTATGAGAAACTCCCCAACTTTTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAGGAAATACCAGAAAGGAACCAGGGTCCGGTT GCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAAT >In-frame_ENST00000448733_ENST00000521605_TCGA-CF-A1HS-01A_TPD52_chr8_80954854_-_MRPS28_chr8_80831382_length(amino acids)=219AA_start in transcript=348_stop in transcript=1007 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK VEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVNIRSIQH -------------------------------------------------------------- >In-frame_ENST00000379097_ENST00000521605_TCGA-CF-A1HS-01A_TPD52_chr8_80954854_-_MRPS28_chr8_80831382_length(transcript)=1101nt_BP=918nt GCCTGAACTGTTTGTACCTCTGGGCCATATTGCAGAACCCTGCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCA TTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCTCCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAG GAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGGGCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAG TTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAACTGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCT GGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCAGTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTG TCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCTTCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAA GATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAA ATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTA AAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAG GCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAAAACTCCCCAACTTTTAAATCATTTGAAGAA AAGGTCGAAAACTTAAAGGAAATACCAGAAAGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGC AACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGA >In-frame_ENST00000379097_ENST00000521605_TCGA-CF-A1HS-01A_TPD52_chr8_80954854_-_MRPS28_chr8_80831382_length(amino acids)=205AA_start in transcript=348_stop in transcript=965 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK VEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKNSPTFK -------------------------------------------------------------- >In-frame_ENST00000537855_ENST00000521605_TCGA-D8-A1JL-01A_TPD52_chr8_80954857_-_MRPS28_chr8_80831385_length(transcript)=1060nt_BP=877nt GCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCATTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCT CCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAGGAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGG GCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAGTTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAAC TGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCTGGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCA GTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTGTCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCT TCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAAGATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGA AGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAAATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCA TCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTAAAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAAC ATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAGGCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAA AAAGCTGGAAGATGTAAAAAACTCCCCAACTTTTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAGGAAATACCAGAAAGGAACCAGGG TCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCT >In-frame_ENST00000537855_ENST00000521605_TCGA-D8-A1JL-01A_TPD52_chr8_80954857_-_MRPS28_chr8_80831385_length(amino acids)=205AA_start in transcript=307_stop in transcript=924 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK VEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKNSPTFK -------------------------------------------------------------- >In-frame_ENST00000379096_ENST00000521605_TCGA-D8-A1JL-01A_TPD52_chr8_80954857_-_MRPS28_chr8_80831385_length(transcript)=733nt_BP=550nt GCGGGAGTCGCCGGCGGAGGCGAGGAGGAGCTCTGCGCGGCGCGGCGGGCGATCCGAGCCGGGACGGGCTGCAGGCGGGGGTGCTGCAGA GGACACGAGGCGGCGGGCTGGAGACATGGACCGCGGCGAGCAAGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAAGATGTTGC TGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAAATCCAGAC TCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTAAAACAGAA CATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAGGCCTCAGC TGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAAAACTCCCCAACTTTTAAATCATTTGAAGAAAAGGTCGA AAACTTAAAGGAAATACCAGAAAGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAG ATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGAAAAATAAA >In-frame_ENST00000379096_ENST00000521605_TCGA-D8-A1JL-01A_TPD52_chr8_80954857_-_MRPS28_chr8_80831385_length(amino acids)=160AA_start in transcript=115_stop in transcript=597 MDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDV -------------------------------------------------------------- >In-frame_ENST00000518937_ENST00000521605_TCGA-D8-A1JL-01A_TPD52_chr8_80954857_-_MRPS28_chr8_80831385_length(transcript)=903nt_BP=720nt AGGTCGACCGGGTCAGGTGGTTGGGTGACGCCCCAGGAAAGCGCTCCAGGCCGAGGGCGGGCGGCGCCGCCGCGCCCGACGCCTCTGGGG GTGGGGACTTCGCGGGAGTCGCCGGCGGAGGCGAGGAGGAGCTCTGCGCGGCGCGGCGGGCGATCCGAGCCGGGACGGGCTGCAGGCGGG GGTGCTGCAGAGGACACGAGGCGGCGGGCTGGAGACATGGACCGCGGCGAGCAAGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGA GAAGATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAA GAAATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAA CTAAAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAG AAGGCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAATTGCAAGCCTTTTCACATTCCTTTAGT ATACGTTCCATTCAGCATTCAATTAGCATGCCTGCTATGAGAAACTCCCCAACTTTTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAG GAAATACCAGAAAGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGT ACTAGAGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGAAAAATAAATGAACTTTGC >In-frame_ENST00000518937_ENST00000521605_TCGA-D8-A1JL-01A_TPD52_chr8_80954857_-_MRPS28_chr8_80831385_length(amino acids)=227AA_start in transcript=84_stop in transcript=767 MGVGTSRESPAEARRSSARRGGRSEPGRAAGGGAAEDTRRRAGDMDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKV EEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKLQAFSHS -------------------------------------------------------------- >In-frame_ENST00000519303_ENST00000276585_TCGA-D8-A1JL-01A_TPD52_chr8_80954857_-_MRPS28_chr8_80831385_length(transcript)=1097nt_BP=665nt GTGCGTGTGTGGGGGAGAGGGAGAGAAGGTTCTGGGAGGTGGCGAAGGGGCTAGCGTCAGGGGCTGGCGGCCGTGATGCGCTTTGGGTGG AAAGCCGCGTGAAGGGAGCACGGCGCAGCCAGCTCCTGTAAGTGACTGGAACCAGGAACAGAGGACAGTGAGTCGCTCTCGTCCCTCCAG GTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAAGATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGG AAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAAATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGA TCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTAAAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACA AGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAGGCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAG ATGTAAAATTGCAAGCCTTTTCACATTCCTTTAGTATACGTTCCATTCAGCATTCAATTAGCATGCCTGCTATGAGAAACTCCCCAACTT TTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAGGAAATACCAGAAAGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTACG TCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCG AAAGAAGAACATCATGAAAAATAAATGAACTTTGCTTAGTGGATTGACTCCTTTGCTGAAGTCAGTTATTCATCAAGAATGCAATTAGAC TAATTGTGAATAAATGATTGAATGAAGATATAATAAATAAAAGCTATAATTATAGATAACTCTTATTAGAATTTTCTTTAGCAATATTCC CACCCCCCACCCCTTGTTTTGCTCTTAATGTTTTTTTCCTTTGGTGGGGATAGTATACACTGTACTAAGAAATTGTCATTCAATAAATAC >In-frame_ENST00000519303_ENST00000276585_TCGA-D8-A1JL-01A_TPD52_chr8_80954857_-_MRPS28_chr8_80831385_length(amino acids)=176AA_start in transcript=182_stop in transcript=712 MLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYK -------------------------------------------------------------- >In-frame_ENST00000517427_ENST00000521605_TCGA-D8-A1JL-01A_TPD52_chr8_80954857_-_MRPS28_chr8_80831385_length(transcript)=1128nt_BP=945nt GCCTGAACTGTTTGTACCTCTGGGCCATATTGCAGAACCCTGCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCA TTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCTCCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAG GAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGGGCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAG TTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAACTGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCT GGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCAGTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTG TCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCTTCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAA GATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAA ATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTA AAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAG GCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAATTGCAAGCCTTTTCACATTCCTTTAGAAAC TCCCCAACTTTTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAGGAAATACCAGAAAGGAACCAGGGTCCGGTTGCGGCTATTAGATCT TGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGA >In-frame_ENST00000517427_ENST00000521605_TCGA-D8-A1JL-01A_TPD52_chr8_80954857_-_MRPS28_chr8_80831385_length(amino acids)=214AA_start in transcript=348_stop in transcript=992 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK VEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKLQAFSH -------------------------------------------------------------- >In-frame_ENST00000520527_ENST00000521605_TCGA-D8-A1JL-01A_TPD52_chr8_80954857_-_MRPS28_chr8_80831385_length(transcript)=1170nt_BP=987nt GCCTGAACTGTTTGTACCTCTGGGCCATATTGCAGAACCCTGCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCA TTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCTCCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAG GAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGGGCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAG TTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAACTGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCT GGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCAGTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTG TCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCTTCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAA GATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAA ATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTA AAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAG GCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAATTGCAAGCCTTTTCACATTCCTTTAGTATA CGTTCCATTCAGCATTCAATTAGCATGCCTGCTATGAGAAACTCCCCAACTTTTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAGGAA ATACCAGAAAGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACT AGAGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGAAAAATAAATGAACTTTGCTTA >In-frame_ENST00000520527_ENST00000521605_TCGA-D8-A1JL-01A_TPD52_chr8_80954857_-_MRPS28_chr8_80831385_length(amino acids)=228AA_start in transcript=348_stop in transcript=1034 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK VEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKLQAFSH -------------------------------------------------------------- >In-frame_ENST00000448733_ENST00000521605_TCGA-D8-A1JL-01A_TPD52_chr8_80954857_-_MRPS28_chr8_80831385_length(transcript)=1143nt_BP=960nt GCCTGAACTGTTTGTACCTCTGGGCCATATTGCAGAACCCTGCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCA TTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCTCCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAG GAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGGGCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAG TTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAACTGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCT GGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCAGTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTG TCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCTTCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAA GATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAA ATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTA AAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAG GCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAATATACGTTCCATTCAGCATTCAATTAGCATG CCTGCTATGAGAAACTCCCCAACTTTTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAGGAAATACCAGAAAGGAACCAGGGTCCGGTT GCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAAT >In-frame_ENST00000448733_ENST00000521605_TCGA-D8-A1JL-01A_TPD52_chr8_80954857_-_MRPS28_chr8_80831385_length(amino acids)=219AA_start in transcript=348_stop in transcript=1007 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK VEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVNIRSIQH -------------------------------------------------------------- >In-frame_ENST00000379097_ENST00000521605_TCGA-D8-A1JL-01A_TPD52_chr8_80954857_-_MRPS28_chr8_80831385_length(transcript)=1101nt_BP=918nt GCCTGAACTGTTTGTACCTCTGGGCCATATTGCAGAACCCTGCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCA TTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCTCCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAG GAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGGGCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAG TTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAACTGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCT GGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCAGTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTG TCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCTTCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAA GATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAA ATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTA AAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAG GCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAAAACTCCCCAACTTTTAAATCATTTGAAGAA AAGGTCGAAAACTTAAAGGAAATACCAGAAAGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGC AACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGA >In-frame_ENST00000379097_ENST00000521605_TCGA-D8-A1JL-01A_TPD52_chr8_80954857_-_MRPS28_chr8_80831385_length(amino acids)=205AA_start in transcript=348_stop in transcript=965 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK VEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKNSPTFK -------------------------------------------------------------- >In-frame_ENST00000537855_ENST00000276585_TCGA-BH-A204-01A_TPD52_chr8_80963762_-_MRPS28_chr8_80831383_length(transcript)=1260nt_BP=828nt GCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCATTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCT CCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAGGAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGG GCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAGTTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAAC TGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCTGGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCA GTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTGTCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCT TCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAAGATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGA AGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAAATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCA TCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTAAAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAAC ATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAGGCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAA AAAGCTGGAAGATGTAAAGAAATACCAGAAAGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGC AACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGA AAAATAAATGAACTTTGCTTAGTGGATTGACTCCTTTGCTGAAGTCAGTTATTCATCAAGAATGCAATTAGACTAATTGTGAATAAATGA TTGAATGAAGATATAATAAATAAAAGCTATAATTATAGATAACTCTTATTAGAATTTTCTTTAGCAATATTCCCACCCCCCACCCCTTGT TTTGCTCTTAATGTTTTTTTCCTTTGGTGGGGATAGTATACACTGTACTAAGAAATTGTCATTCAATAAATACGTTTTGAGTGCTGTCTA >In-frame_ENST00000537855_ENST00000276585_TCGA-BH-A204-01A_TPD52_chr8_80963762_-_MRPS28_chr8_80831383_length(amino acids)=229AA_start in transcript=307_stop in transcript=996 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK VEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKKYQKGT -------------------------------------------------------------- >In-frame_ENST00000379096_ENST00000276585_TCGA-BH-A204-01A_TPD52_chr8_80963762_-_MRPS28_chr8_80831383_length(transcript)=933nt_BP=501nt GCGGGAGTCGCCGGCGGAGGCGAGGAGGAGCTCTGCGCGGCGCGGCGGGCGATCCGAGCCGGGACGGGCTGCAGGCGGGGGTGCTGCAGA GGACACGAGGCGGCGGGCTGGAGACATGGACCGCGGCGAGCAAGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAAGATGTTGC TGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAAATCCAGAC TCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTAAAACAGAA CATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAGGCCTCAGC TGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAGAAATACCAGAAAGGAACCAGGGTCCGGTTGCGGCTATT AGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAG TAAAGACTCAAGATCGAAAGAAGAACATCATGAAAAATAAATGAACTTTGCTTAGTGGATTGACTCCTTTGCTGAAGTCAGTTATTCATC AAGAATGCAATTAGACTAATTGTGAATAAATGATTGAATGAAGATATAATAAATAAAAGCTATAATTATAGATAACTCTTATTAGAATTT TCTTTAGCAATATTCCCACCCCCCACCCCTTGTTTTGCTCTTAATGTTTTTTTCCTTTGGTGGGGATAGTATACACTGTACTAAGAAATT >In-frame_ENST00000379096_ENST00000276585_TCGA-BH-A204-01A_TPD52_chr8_80963762_-_MRPS28_chr8_80831383_length(amino acids)=184AA_start in transcript=115_stop in transcript=669 MDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDV TATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKKYQKGTRVRLRLLDLELTSRFLGATTDTTVLEANAVLLGIQESKDSRSKEE -------------------------------------------------------------- >In-frame_ENST00000518937_ENST00000276585_TCGA-BH-A204-01A_TPD52_chr8_80963762_-_MRPS28_chr8_80831383_length(transcript)=1034nt_BP=602nt AGGTCGACCGGGTCAGGTGGTTGGGTGACGCCCCAGGAAAGCGCTCCAGGCCGAGGGCGGGCGGCGCCGCCGCGCCCGACGCCTCTGGGG GTGGGGACTTCGCGGGAGTCGCCGGCGGAGGCGAGGAGGAGCTCTGCGCGGCGCGGCGGGCGATCCGAGCCGGGACGGGCTGCAGGCGGG GGTGCTGCAGAGGACACGAGGCGGCGGGCTGGAGACATGGACCGCGGCGAGCAAGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGA GAAGATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAA GAAATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAA CTAAAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAG AAGGCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAGAAATACCAGAAAGGAACCAGGGTCCGG TTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGA ATCCAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGAAAAATAAATGAACTTTGCTTAGTGGATTGACTCCTTTGCTGAAGTC AGTTATTCATCAAGAATGCAATTAGACTAATTGTGAATAAATGATTGAATGAAGATATAATAAATAAAAGCTATAATTATAGATAACTCT TATTAGAATTTTCTTTAGCAATATTCCCACCCCCCACCCCTTGTTTTGCTCTTAATGTTTTTTTCCTTTGGTGGGGATAGTATACACTGT >In-frame_ENST00000518937_ENST00000276585_TCGA-BH-A204-01A_TPD52_chr8_80963762_-_MRPS28_chr8_80831383_length(amino acids)=228AA_start in transcript=84_stop in transcript=770 MGVGTSRESPAEARRSSARRGGRSEPGRAAGGGAAEDTRRRAGDMDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKV EEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKKYQKGTR -------------------------------------------------------------- >In-frame_ENST00000517427_ENST00000276585_TCGA-BH-A204-01A_TPD52_chr8_80963762_-_MRPS28_chr8_80831383_length(transcript)=1301nt_BP=869nt GCCTGAACTGTTTGTACCTCTGGGCCATATTGCAGAACCCTGCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCA TTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCTCCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAG GAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGGGCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAG TTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAACTGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCT GGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCAGTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTG TCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCTTCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAA GATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAA ATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTA AAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAG GCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAGAAATACCAGAAAGGAACCAGGGTCCGGTTG CGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATC CAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGAAAAATAAATGAACTTTGCTTAGTGGATTGACTCCTTTGCTGAAGTCAGT TATTCATCAAGAATGCAATTAGACTAATTGTGAATAAATGATTGAATGAAGATATAATAAATAAAAGCTATAATTATAGATAACTCTTAT TAGAATTTTCTTTAGCAATATTCCCACCCCCCACCCCTTGTTTTGCTCTTAATGTTTTTTTCCTTTGGTGGGGATAGTATACACTGTACT >In-frame_ENST00000517427_ENST00000276585_TCGA-BH-A204-01A_TPD52_chr8_80963762_-_MRPS28_chr8_80831383_length(amino acids)=229AA_start in transcript=348_stop in transcript=1037 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK VEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKKYQKGT -------------------------------------------------------------- >In-frame_ENST00000520527_ENST00000276585_TCGA-BH-A204-01A_TPD52_chr8_80963762_-_MRPS28_chr8_80831383_length(transcript)=1301nt_BP=869nt GCCTGAACTGTTTGTACCTCTGGGCCATATTGCAGAACCCTGCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCA TTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCTCCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAG GAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGGGCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAG TTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAACTGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCT GGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCAGTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTG TCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCTTCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAA GATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAA ATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTA AAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAG GCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAGAAATACCAGAAAGGAACCAGGGTCCGGTTG CGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATC CAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGAAAAATAAATGAACTTTGCTTAGTGGATTGACTCCTTTGCTGAAGTCAGT TATTCATCAAGAATGCAATTAGACTAATTGTGAATAAATGATTGAATGAAGATATAATAAATAAAAGCTATAATTATAGATAACTCTTAT TAGAATTTTCTTTAGCAATATTCCCACCCCCCACCCCTTGTTTTGCTCTTAATGTTTTTTTCCTTTGGTGGGGATAGTATACACTGTACT >In-frame_ENST00000520527_ENST00000276585_TCGA-BH-A204-01A_TPD52_chr8_80963762_-_MRPS28_chr8_80831383_length(amino acids)=229AA_start in transcript=348_stop in transcript=1037 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK VEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKKYQKGT -------------------------------------------------------------- >In-frame_ENST00000448733_ENST00000276585_TCGA-BH-A204-01A_TPD52_chr8_80963762_-_MRPS28_chr8_80831383_length(transcript)=1301nt_BP=869nt GCCTGAACTGTTTGTACCTCTGGGCCATATTGCAGAACCCTGCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCA TTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCTCCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAG GAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGGGCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAG TTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAACTGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCT GGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCAGTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTG TCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCTTCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAA GATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAA ATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTA AAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAG GCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAGAAATACCAGAAAGGAACCAGGGTCCGGTTG CGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATC CAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGAAAAATAAATGAACTTTGCTTAGTGGATTGACTCCTTTGCTGAAGTCAGT TATTCATCAAGAATGCAATTAGACTAATTGTGAATAAATGATTGAATGAAGATATAATAAATAAAAGCTATAATTATAGATAACTCTTAT TAGAATTTTCTTTAGCAATATTCCCACCCCCCACCCCTTGTTTTGCTCTTAATGTTTTTTTCCTTTGGTGGGGATAGTATACACTGTACT >In-frame_ENST00000448733_ENST00000276585_TCGA-BH-A204-01A_TPD52_chr8_80963762_-_MRPS28_chr8_80831383_length(amino acids)=229AA_start in transcript=348_stop in transcript=1037 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK VEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKKYQKGT -------------------------------------------------------------- >In-frame_ENST00000379097_ENST00000276585_TCGA-BH-A204-01A_TPD52_chr8_80963762_-_MRPS28_chr8_80831383_length(transcript)=1301nt_BP=869nt GCCTGAACTGTTTGTACCTCTGGGCCATATTGCAGAACCCTGCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCA TTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCTCCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAG GAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGGGCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAG TTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAACTGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCT GGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCAGTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTG TCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCTTCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAA GATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGAAGAAGAA ATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTGGAATCAATTCTCTACAGGAACTA AAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTACAAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAG GCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCATCACCAAAAAGCTGGAAGATGTAAAGAAATACCAGAAAGGAACCAGGGTCCGGTTG CGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATC CAGGAGAGTAAAGACTCAAGATCGAAAGAAGAACATCATGAAAAATAAATGAACTTTGCTTAGTGGATTGACTCCTTTGCTGAAGTCAGT TATTCATCAAGAATGCAATTAGACTAATTGTGAATAAATGATTGAATGAAGATATAATAAATAAAAGCTATAATTATAGATAACTCTTAT TAGAATTTTCTTTAGCAATATTCCCACCCCCCACCCCTTGTTTTGCTCTTAATGTTTTTTTCCTTTGGTGGGGATAGTATACACTGTACT >In-frame_ENST00000379097_ENST00000276585_TCGA-BH-A204-01A_TPD52_chr8_80963762_-_MRPS28_chr8_80831383_length(amino acids)=229AA_start in transcript=348_stop in transcript=1037 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK VEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKKYQKGT -------------------------------------------------------------- >In-frame_ENST00000537855_ENST00000521605_TCGA-R2-A69V-01A_TPD52_chr8_80976713_-_MRPS28_chr8_80831383_length(transcript)=760nt_BP=577nt GCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCATTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCT CCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAGGAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGG GCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAGTTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAAC TGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCTGGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCA GTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTGTCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCT TCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAAGATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGA AGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGAAATACCAGAAAGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTA CGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTCTCTTGGGAATCCAGGAGAGTAAAGACTCAAGAT >In-frame_ENST00000537855_ENST00000521605_TCGA-R2-A69V-01A_TPD52_chr8_80976713_-_MRPS28_chr8_80831383_length(amino acids)=105AA_start in transcript=307_stop in transcript=624 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK -------------------------------------------------------------- >In-frame_ENST00000379096_ENST00000521605_TCGA-R2-A69V-01A_TPD52_chr8_80976713_-_MRPS28_chr8_80831383_length(transcript)=433nt_BP=250nt GCGGGAGTCGCCGGCGGAGGCGAGGAGGAGCTCTGCGCGGCGCGGCGGGCGATCCGAGCCGGGACGGGCTGCAGGCGGGGGTGCTGCAGA GGACACGAGGCGGCGGGCTGGAGACATGGACCGCGGCGAGCAAGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAAGATGTTGC TGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGAAATACCAGAAAGGAACCA GGGTCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAATGCAGTTC >In-frame_ENST00000379096_ENST00000521605_TCGA-R2-A69V-01A_TPD52_chr8_80976713_-_MRPS28_chr8_80831383_length(amino acids)=74AA_start in transcript=222_stop in transcript=1 -------------------------------------------------------------- >In-frame_ENST00000518937_ENST00000521605_TCGA-R2-A69V-01A_TPD52_chr8_80976713_-_MRPS28_chr8_80831383_length(transcript)=534nt_BP=351nt AGGTCGACCGGGTCAGGTGGTTGGGTGACGCCCCAGGAAAGCGCTCCAGGCCGAGGGCGGGCGGCGCCGCCGCGCCCGACGCCTCTGGGG GTGGGGACTTCGCGGGAGTCGCCGGCGGAGGCGAGGAGGAGCTCTGCGCGGCGCGGCGGGCGATCCGAGCCGGGACGGGCTGCAGGCGGG GGTGCTGCAGAGGACACGAGGCGGCGGGCTGGAGACATGGACCGCGGCGAGCAAGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGA GAAGATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGAAATACCA GAAAGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGC >In-frame_ENST00000518937_ENST00000521605_TCGA-R2-A69V-01A_TPD52_chr8_80976713_-_MRPS28_chr8_80831383_length(amino acids)=104AA_start in transcript=84_stop in transcript=398 MGVGTSRESPAEARRSSARRGGRSEPGRAAGGGAAEDTRRRAGDMDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKE -------------------------------------------------------------- >In-frame_ENST00000517427_ENST00000521605_TCGA-R2-A69V-01A_TPD52_chr8_80976713_-_MRPS28_chr8_80831383_length(transcript)=801nt_BP=618nt GCCTGAACTGTTTGTACCTCTGGGCCATATTGCAGAACCCTGCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCA TTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCTCCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAG GAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGGGCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAG TTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAACTGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCT GGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCAGTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTG TCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCTTCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAA GATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGAAATACCAGAA AGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAA >In-frame_ENST00000517427_ENST00000521605_TCGA-R2-A69V-01A_TPD52_chr8_80976713_-_MRPS28_chr8_80831383_length(amino acids)=105AA_start in transcript=348_stop in transcript=665 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK -------------------------------------------------------------- >In-frame_ENST00000520527_ENST00000521605_TCGA-R2-A69V-01A_TPD52_chr8_80976713_-_MRPS28_chr8_80831383_length(transcript)=801nt_BP=618nt GCCTGAACTGTTTGTACCTCTGGGCCATATTGCAGAACCCTGCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCA TTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCTCCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAG GAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGGGCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAG TTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAACTGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCT GGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCAGTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTG TCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCTTCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAA GATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGAAATACCAGAA AGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAA >In-frame_ENST00000520527_ENST00000521605_TCGA-R2-A69V-01A_TPD52_chr8_80976713_-_MRPS28_chr8_80831383_length(amino acids)=105AA_start in transcript=348_stop in transcript=665 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK -------------------------------------------------------------- >In-frame_ENST00000448733_ENST00000521605_TCGA-R2-A69V-01A_TPD52_chr8_80976713_-_MRPS28_chr8_80831383_length(transcript)=801nt_BP=618nt GCCTGAACTGTTTGTACCTCTGGGCCATATTGCAGAACCCTGCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCA TTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCTCCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAG GAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGGGCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAG TTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAACTGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCT GGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCAGTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTG TCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCTTCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAA GATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGAAATACCAGAA AGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAA >In-frame_ENST00000448733_ENST00000521605_TCGA-R2-A69V-01A_TPD52_chr8_80976713_-_MRPS28_chr8_80831383_length(amino acids)=105AA_start in transcript=348_stop in transcript=665 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK -------------------------------------------------------------- >In-frame_ENST00000379097_ENST00000521605_TCGA-R2-A69V-01A_TPD52_chr8_80976713_-_MRPS28_chr8_80831383_length(transcript)=801nt_BP=618nt GCCTGAACTGTTTGTACCTCTGGGCCATATTGCAGAACCCTGCCCTTCTTTGTTGACTGAGGAAAGCTCGCTCCCTGCCCAGGTTTTTCA TTGTTGATCGAAATTAACACCAGGTGGTGAATAGAGCCCCTCCTAAGGTTGCTCAGGATAAATCATTTATTAAATAGGTCTGCTTATCAG GAGGGGCGTGAAGGCTCCCAAAAGGAAATGCTGGCACCTGGGCCCAGAAGCCAGGGCCTCTAACTCCTGGGGTTGATTTCTTCAGTGAAG TTGCACCCTACAAAGGGAATATGGCCAAAGCGGCACTCAACTGAAGGCTGATATCAGGCGATTAGACAGCCATGCATTCTGCGTTTGTCT GGAATGGATTGTAGAGAGATGGACTTATATGAGGACTACCAGTCCCCGTTTGATTTTGATGCAGGAGTGAACAAAAGCTATCTCTACTTG TCTCCTAGTGGAAATTCATCTCCACCCGGATCACCTACTCTTCAGAAATTTGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAA GATGTTGCTGCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGAAATACCAGAA AGGAACCAGGGTCCGGTTGCGGCTATTAGATCTTGAACTTACGTCTAGGTTCCTGGGAGCAACAACAGATACAACTGTACTAGAGGCTAA >In-frame_ENST00000379097_ENST00000521605_TCGA-R2-A69V-01A_TPD52_chr8_80976713_-_MRPS28_chr8_80831383_length(amino acids)=105AA_start in transcript=348_stop in transcript=665 MRLSGMDCREMDLYEDYQSPFDFDAGVNKSYLYLSPSGNSSPPGSPTLQKFGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAK -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for TPD52-MRPS28 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for TPD52-MRPS28 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for TPD52-MRPS28 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | TPD52 | C0033578 | Prostatic Neoplasms | 2 | CTD_human |
Hgene | TPD52 | C0376358 | Malignant neoplasm of prostate | 2 | CTD_human |
Hgene | TPD52 | C0027643 | Neoplasm Recurrence, Local | 1 | CTD_human |
Tgene | MRPS28 | C0006142 | Malignant neoplasm of breast | 1 | CTD_human |
Tgene | MRPS28 | C0678222 | Breast Carcinoma | 1 | CTD_human |
Tgene | MRPS28 | C1257931 | Mammary Neoplasms, Human | 1 | CTD_human |
Tgene | MRPS28 | C1458155 | Mammary Neoplasms | 1 | CTD_human |
Tgene | MRPS28 | C4704874 | Mammary Carcinoma, Human | 1 | CTD_human |