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 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:BCAS3-RNF169 (FusionGDB2 ID:9301) |
Fusion Gene Summary for BCAS3-RNF169 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: BCAS3-RNF169 | Fusion gene ID: 9301 | Hgene | Tgene | Gene symbol | BCAS3 | RNF169 | Gene ID | 54828 | 254225 |
| Gene name | BCAS3 microtubule associated cell migration factor | ring finger protein 169 | |
| Synonyms | GAOB1|MAAB | - | |
| Cytomap | 17q23.2 | 11q13.4 | |
| Type of gene | protein-coding | protein-coding | |
| Description | breast carcinoma-amplified sequence 3BCAS4/BCAS3 fusionRudhirabreast carcinoma amplified sequence 4/3 fusion proteinmetastasis associated antigen of breast cancerprotein Maab1 | E3 ubiquitin-protein ligase RNF169RING-type E3 ubiquitin transferase RNF169 | |
| Modification date | 20200313 | 20200313 | |
| UniProtAcc | . | . | |
| Ensembl transtripts involved in fusion gene | ENST00000589222, ENST00000407086, ENST00000390652, ENST00000408905, ENST00000588462, ENST00000585744, ENST00000588874, ENST00000585812, | ENST00000299563, | |
| Fusion gene scores | * DoF score | 53 X 35 X 17=31535 | 10 X 8 X 5=400 |
| # samples | 61 | 13 | |
| ** MAII score | log2(61/31535*10)=-5.69200088030826 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(13/400*10)=-1.62148837674627 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: BCAS3 [Title/Abstract] AND RNF169 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | BCAS3(58786686)-RNF169(74521229), # samples:3 | ||
| Anticipated loss of major functional domain due to fusion event. | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | BCAS3 | GO:0043085 | positive regulation of catalytic activity | 17505058 |
| Hgene | BCAS3 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 17505058 |
| Hgene | BCAS3 | GO:0071391 | cellular response to estrogen stimulus | 17505058 |
| Tgene | RNF169 | GO:0006974 | cellular response to DNA damage stimulus | 22733822 |
| Tgene | RNF169 | GO:2000780 | negative regulation of double-strand break repair | 22742833 |
| Fusion gene breakpoints across BCAS3 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene breakpoints across RNF169 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
| Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | BRCA | TCGA-BH-A18R-01A | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521229 | + |
| ChimerDB4 | BRCA | TCGA-BH-A18R | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + |
| ChimerDB4 | BRCA | TCGA-BH-A18R-01A | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521229 | + |
| ChimerDB4 | BRCA | TCGA-BH-A18R-01A | BCAS3 | chr17 | 58786686 | - | RNF169 | chr11 | 74521229 | + |
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Fusion Gene ORF analysis for BCAS3-RNF169 |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000589222 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521229 | + |
| In-frame | ENST00000407086 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521229 | + |
| In-frame | ENST00000390652 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521229 | + |
| In-frame | ENST00000408905 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521229 | + |
| In-frame | ENST00000588462 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521229 | + |
| intron-3CDS | ENST00000585744 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521229 | + |
| intron-3CDS | ENST00000588874 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521229 | + |
| intron-3CDS | ENST00000585812 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521229 | + |
| In-frame | ENST00000589222 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + |
| In-frame | ENST00000407086 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + |
| In-frame | ENST00000390652 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + |
| In-frame | ENST00000408905 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + |
| In-frame | ENST00000588462 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + |
| intron-3CDS | ENST00000585744 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + |
| intron-3CDS | ENST00000588874 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + |
| intron-3CDS | ENST00000585812 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000589222 | BCAS3 | chr17 | 58786686 | + | ENST00000299563 | RNF169 | chr11 | 74521229 | + | 7623 | 389 | 68 | 1939 | 623 |
| ENST00000407086 | BCAS3 | chr17 | 58786686 | + | ENST00000299563 | RNF169 | chr11 | 74521229 | + | 7603 | 369 | 48 | 1919 | 623 |
| ENST00000390652 | BCAS3 | chr17 | 58786686 | + | ENST00000299563 | RNF169 | chr11 | 74521229 | + | 7586 | 352 | 31 | 1902 | 623 |
| ENST00000408905 | BCAS3 | chr17 | 58786686 | + | ENST00000299563 | RNF169 | chr11 | 74521229 | + | 7555 | 321 | 0 | 1871 | 623 |
| ENST00000588462 | BCAS3 | chr17 | 58786686 | + | ENST00000299563 | RNF169 | chr11 | 74521229 | + | 7555 | 321 | 0 | 1871 | 623 |
| ENST00000589222 | BCAS3 | chr17 | 58786686 | + | ENST00000299563 | RNF169 | chr11 | 74521228 | + | 7623 | 389 | 68 | 1939 | 623 |
| ENST00000407086 | BCAS3 | chr17 | 58786686 | + | ENST00000299563 | RNF169 | chr11 | 74521228 | + | 7603 | 369 | 48 | 1919 | 623 |
| ENST00000390652 | BCAS3 | chr17 | 58786686 | + | ENST00000299563 | RNF169 | chr11 | 74521228 | + | 7586 | 352 | 31 | 1902 | 623 |
| ENST00000408905 | BCAS3 | chr17 | 58786686 | + | ENST00000299563 | RNF169 | chr11 | 74521228 | + | 7555 | 321 | 0 | 1871 | 623 |
| ENST00000588462 | BCAS3 | chr17 | 58786686 | + | ENST00000299563 | RNF169 | chr11 | 74521228 | + | 7555 | 321 | 0 | 1871 | 623 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000589222 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521229 | + | 0.000242746 | 0.99975723 |
| ENST00000407086 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521229 | + | 0.000241558 | 0.9997584 |
| ENST00000390652 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521229 | + | 0.000239607 | 0.99976045 |
| ENST00000408905 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521229 | + | 0.000237531 | 0.9997625 |
| ENST00000588462 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521229 | + | 0.000237531 | 0.9997625 |
| ENST00000589222 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + | 0.000242746 | 0.99975723 |
| ENST00000407086 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + | 0.000241558 | 0.9997584 |
| ENST00000390652 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + | 0.000239607 | 0.99976045 |
| ENST00000408905 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + | 0.000237531 | 0.9997625 |
| ENST00000588462 | ENST00000299563 | BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + | 0.000237531 | 0.9997625 |
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Fusion Genomic Features for BCAS3-RNF169 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + | 1.27E-09 | 1 |
| BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + | 1.27E-09 | 1 |
| BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + | 1.27E-09 | 1 |
| BCAS3 | chr17 | 58786686 | + | RNF169 | chr11 | 74521228 | + | 1.27E-09 | 1 |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for BCAS3-RNF169 |
| Go to FGviewer for the breakpoints of chr17:58786686-chr11:74521229 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
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| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | . |
| FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | RNF169 | chr17:58786686 | chr11:74521228 | ENST00000299563 | 1 | 6 | 205_213 | 192.0 | 709.0 | Motif | Note=UMI motif | |
| Tgene | RNF169 | chr17:58786686 | chr11:74521228 | ENST00000299563 | 1 | 6 | 665_682 | 192.0 | 709.0 | Motif | Note=MIU motif | |
| Tgene | RNF169 | chr17:58786686 | chr11:74521228 | ENST00000299563 | 1 | 6 | 689_701 | 192.0 | 709.0 | Motif | Note=LR motif | |
| Tgene | RNF169 | chr17:58786686 | chr11:74521229 | ENST00000299563 | 1 | 6 | 205_213 | 192.0 | 709.0 | Motif | Note=UMI motif | |
| Tgene | RNF169 | chr17:58786686 | chr11:74521229 | ENST00000299563 | 1 | 6 | 665_682 | 192.0 | 709.0 | Motif | Note=MIU motif | |
| Tgene | RNF169 | chr17:58786686 | chr11:74521229 | ENST00000299563 | 1 | 6 | 689_701 | 192.0 | 709.0 | Motif | Note=LR motif |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | RNF169 | chr17:58786686 | chr11:74521228 | ENST00000299563 | 1 | 6 | 68_107 | 192.0 | 709.0 | Zinc finger | RING-type | |
| Tgene | RNF169 | chr17:58786686 | chr11:74521229 | ENST00000299563 | 1 | 6 | 68_107 | 192.0 | 709.0 | Zinc finger | RING-type |
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Fusion Gene Sequence for BCAS3-RNF169 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >In-frame_ENST00000589222_ENST00000299563_TCGA-BH-A18R-01A_BCAS3_chr17_58786686_+_RNF169_chr11_74521229_length(transcript)=7623nt_BP=389nt CTCGGGGAGACTCCAAACAGTGAGCCTAGAGCTGGAGACTAGCGTTAACCGGCGGGGCGGCCGGTTTTATGAATGAAGCTATGGCTACAG ATTCCCCAAGAAGACCCAGTCGTTGTACTGGTGGAGTTGTGGTTCGCCCCCAGGCTGTCACAGAGCAGTCCTACATGGAAAGTGTTGTGA CTTTTCTGCAGGATGTTGTGCCACAGGCTTACAGTGGAACACCTCTAACAGAAGAAAAGGAGAAAATAGTCTGGGTCAGATTTGAAAATG CAGATTTAAATGATACATCAAGAAATCTGGAATTTCATGAAATACATAGTACTGGGAATGAACCGCCTTTGTTGATTATGATTGGCTACA GTGATGGAATGCAGGTCTGGAGCATCCCTCTGAGAGAAGAAAAGTTACAAGAGGAAAAACCCTCTGAAGATCAAATCCACAAGCTGTTAC CAGAGGATACAGAAACAGGGAAAAGGAAAATGGATGAACAGAAAAAAAGAGATGAACCATTAGTACTGAAAACAAATCTGGAACGTTGTC CTGCACGTCTCTCAGATTCAGAGAATGAAGAACCTTCTCGAGGCCAGATGACACAGACACATCGCTCGGCATTTGTTTCCAAGAACAACT CCTACTCCTTAGCTTTCCTGGCAGGGAAGCTAAACTCCAAGGTGGAAAGGAGTCAGAGCTGTAGTGACACAGCCCAGGAAAGAGCGAAGA GCAGAGTCAGAGCAGTTCCAGGCAACAAAGCCAAGGTCACAACTATGACTCCAGCCTCCAACCCCATCATTGGTGTCCTCTTGTCAACTC AAAACAACCGCTGCGTCTCGGCCCCTGACTTAACCATCGAAAAGCGTCTACCCTTCAGCTCCCTTTCATCCTTGGCTTCCCTGCATAAGC CAGAGCGTTCTGTCAGCCCTGAGAGCAATGACAGCATCTCCGAAGAACTAAACCATTTCAAGCCCATTGTCTGCTCACCATGTACTCCTC CCAAGAGACTCCCTGATGGCCGTGTGCTAAGTCCTCTCATCATCAAATCAACTCCACGCAACCTAAACAGAAGCCTGCAGAAGCAGACTT CTTATGAGGCCAGTCCACGGATCCTCAAAAAGTGGGAACAGATCTTTCAGGAGCGGCAGATCAAAAAGACCCTTTCAAAAGCCACTCTTA CCTCTCTGGCTCCTGAAATGGGGGAAGAGTTACTAGGCTCTGAAGGTATCCATTCTAGCAAGGAGAAGCCACTTGTGGCTGTAAATACAA GATTATCTGGTGGGCAGGTCCTCTCTGAGTATACTGGACCCACCTCTGCTGATCTTGATCATTTCCCCTCTGTTAGCCAAACAAAAGCAG AACAGGACAGTGATAATAAAAGTAGCACTGAGATCCCACTGGAAACCTGCTGTTCCTCAGAACTCAAAGGGGGAGGCAGTGGGACTTCTT TGGAGAGGGAGCAGTTTGAGGGGTTAGGGTCAACTCCAGATGCCAAGTTAGACAAAACCTGTATAAGCAGAGCCATGAAAATCACCACAG TTAATTCAGTGCTACCCCAAAACAGTGTTTTGGGTGGAGTCCTCAAAACAAAGCAACAATTGAAGACATTAAATCATTTTGATCTGACTA ATGGTGTTCTAGTTGAGAGCCTAAGTGAAGAGCCACTTCCTTCTTTGCGTCGAGGCCGGAAAAGACACTGCAAGACCAAGCACTTAGAAC AAAATGGCTCCCTTAAAAAACTGCGACAAACCAGTGGGGAGGTGGGTCTGGCCCCAACAGACCCAGTCCTGCGAGAGATGGAGCAGAAGC TTCAGCAAGAGGAAGAAGACCGACAGTTGGCTCTGCAGTTGCAGCGCATGTTCGACAATGAGAGGCGGACTGTGAGCCGGCGAAAAGGAA GTGTGGATCAGTATCTCCTACGGTCCAGCAACATGGCCGGGGCCAAGTAGCACCTAATGAAGTGTTACCTATTTTTAAAAGGTCTTAGGC CTTGATCATTTATCCTGAAGAGCTGAGTGTTCTCACTTTGGTTTTATTTTAATGGCAAAACACTGTCTAATATGGTTCTGAGAGGTTCCA GGGCCTTTGTAGTCAATATCCAAGGGAAAAGCATCTCCGTTTCTCTGTGACCCAGGCCAGAAGCCTGAGTGACCCATCCCTAAGGGCTTC TGGGCCAAACCTGGCAGCACCCACTGGGAATGAGATTTGGAACGGCCTCAGGAGCATAATGGCCACAGTTAGTAATGGTAAAGAGGGGAT ACCTTCTTAAACTGATAGACTTCCTGACTTCTTTCAGCAGGGTATTGTTTTAAATCAGCCTTGCAGATAAAAATTAATTCCATCTTTTTC AGACAAGTGAACAATTTAGTTCCTTGGCAGATCCAAAATGATAGATGGTTATGTTACGCTTTCTGCTGTCCCTTGCCAAAAATAAGTAAA TATATCAGTTAAGATTATGCCTTTACAAAAGTTAATTTACATTCTCTGTTTAAAAAATAATATTTGGTGAATGCTATATAGTTGACAGAG CACATTTACAGACCTTATTAATTTAGTCTTTCCAAGAGACCTCTCATGTAACTGGCATTAGCCCCATTTTTAGATGATGAAACTGCAGTG CAGATGTTCTGGTTCTCTCAACTACCAAGTGGCATAACCCATGGATTTTCTAAAGGTTTCCCAAATAGATCACAACCTAAGGGTGTGCCA GGGGAGCCTAGGGGAAGCTAGGCTGGGCATTGAACACTGATAGTGCAGAATCCACATGCAAACAAGATCGACAGGGTGGATAAACATATA TGTGCATTATCCCCATCCCCCACAGTTTAGAGCCTTCTGCTTTTCTGGGGGTTTCAGCCTATGAGACAAACTATAATCAGGCTTCATTAT TACTTTTCAAATGGCCAAGGGTTATCTGCAATGTTGATCTAAAATCCTAAAAAATCACCCTGAAGTCAGGCAAGGAACAATACTTAAACT CCATACTATGGAAACAAGGTATCTAGCTGGATGCAGCTGGTAAATTCAGTCCCATGGACCTTTGGGGGTTTATTTTCCTTAGCAGCTGAC ACCATGTGTCTTTTGCATCCCTGGTGGTGCTTGGTGCTTCTGCCCATCTGGGCTCATTGAGAATAGGGATGAAGATATGATTTTAGGGAA TTTCTGATGGGCTGGCATGCCCCATGTAGTATGAGTTACTATATAAAGTCATGTGACTGGCATTTTAACAGACCTTCCAGAGCTTATATA TCCCAATATATGTTGTTTCCTTTGAGTAGCCCCAGCAGGATACTGCTTAGTTTTTCCAGTGCCATTGGTGAAAGCATTTCTGGAACTGTC TTCAAAGACTAGAAACACTGACTCCCAAAATGCTAGAACTGGAAGGGACCTTAATGGTTATCTATTCCAGCCTCCTCCTAAGGTCCTCCT CAGCTTCTAGACCTAGAAGCCAAAGTCCAGAACAGTGACCCATTGATCAAGGCAGATAGTATAACTCCTTTTAAGTGTTCTCAGATTTGC CTTTTCTCAGGGCAAATCTTCAGTGTTTTGTGGTTATTTGTGGTTGAGAGAGAGAGAGAATGTAATGTCTGAGACTAGCCAGCAGCTATT TGAAGCCTCTGGGAAAGAAGGTGGCTTATCAAGTGGGTTTGTAGTAATGAGTGCTGCTGTAAAGCAGAGCCATTTTCTTGTGCAGCTCAT AGTTCCCAAACAGTTCCCAAACAGAAATTCCAGAGATGTCTTAAACATTGTGGTCATCATTGAGATAGGTGGAATCTCTTTGGTGACTAC GTTGGTGGGGAACATCACTCACCTGAATGTATGCATTCTGTGTTCTCTGTGTGTGTGCACATATGCAGATGTATGTTTTAAAAACATTTA CCAAACTCATGATTTTGTAGTCACACCACTTCAGTTCTGGGCCCTACCAACAATTTATGTCCTCCAAGAGCTGCTGGAGGGCATGTTTGT GCCCAAAACAGAAGAGCTGGCTCTGGTTTACAGAAGACAGGGAGGGTGACCTTACTATAAATGCCCTTAGAGGAAACTTATCAGTTACTG CCATTTCACGCATTTCCTTTTTGATCTTAGTAAATATTATTGGAAGGCTAGTCTTGTTGGTAGGAGCAAAGACACTTATTTTTCCACTTG CCATCTTTCTCTATATCTCCAGTAATTTGAAAAACACTTTTCAGTTGGAATTGATTTTTGTCTTTGGTAAAAAGAAATATTTTTAATAGA TAAAAGATATATATTTTAAATATTTCCCCAAATTAATACTTTCATTTTAAGAATTGCATAGCAGTTGTAACAAGTGCAGAATGAAGAACA AATTCTTGTTAAGCAAATAGTCCAAACTCTAGGTCCAGCTTACTGCCTTCCCCCCTTGTACCTACAGTGATGCCTAGGATGGTATTGACA GTTGTTTTCTAAACTTCCTGCTGAGCAACAGTCCTTCAAATATAGGTAGAGTGGTCTAGGTTAAGGAGGGAGGAGGGTTGATCTTTAATC AGGTTGGCTTTGGAGGAAGGAAAAACCACTAAGGTATTATCTGAATTTTAAGATGCTTCCCATCCTTAATAACTAAAACCTGAATGCTTT TCTTTCTGAAAAATCTCCCTCTCTCCTTCCATGATTCTGAAGTTGGTTAAAAGTCGATATGTTGATGTGTATTATTTGGGGGAACAGAAA AGGACAAGGAAGGAAACAGAACGATGGGAAGGGTTTGTGAGCTAGAATAAGAGGTGCAGGATTTCACAAAACAAATTCCTCACAAATCAT TGAAGCCCAGTTCACCATACAAATTACCCATGTCTTACTCTGTTCCTTGTATATATGCATTCTGGGTTTTTTTATTATTAAAGGGGAAGT TAGGGGGGAGGGTGAAGGTCAGTCTGAGGGGAAATCCAGGAAATGTGGTGCCCTTAGAAGGGGGCTGTCAGCTCTTTTCCATAGAGAGGG AAAGAAACTTTGAGAAAATGTTCTTGACCCATTGATTGTATCTGCTGGAAGAAGTCATCTGGGCCTGTTGGGTTGGTATCAGATCAGGGG ATTATGCATCCAGCCCCTGGCCCCTTTAATCTATTTGCCTCTTTTTAAAAAAGGTTAAGTCTTCTTGGGTGAGGCTTGCCAGGGAAACTC CTAAGTGGCTTCACTTATTTTTTAAATTTTAATTTAATTTTTAAATTTTTGCTTGGAAGCAGCACTGGTAATAAATGTTTTATTTTTTGT TCATTTTCCCTAAAGGAAAAATGTCCTTAAGAGATTAAAGCTCTTAATTGATTACTGTCTGGTTACAAACTGGCAAACTGACTAAAATGG GAAGCTGCCACCGTGCCTGACTCATGTAGCTGATGACCGAAGGCTCATCCTTTCTTTTCTATTTGACAGACATTTACTGAGCTTCAGACT TGAGCCAACCCTGAGCTGGACTGTGGAGATAAAGCAGTTCCTGCTCTTGAGGAGCTCAATGTCTAATGGAATGCATTTGAATGTATGTGT GGCTGGAGAGTTCATTTATGGTCTTAGGAAAGCCATTTCTGGTCCCATTTAGAAAACTGACCAGCACCCAGCAAGCTGCATTCTACATTT TAGAGACCCCATTGGTATTTGTGAATTTGATTGCACCACCGCTTTTCCTTTACTAAGTAATGTTATGGAAGGAGAATGAATTTTCTCCTC TAGTGATTACAGGACATTAACATCTCTTCAGAAGCTGCTTTTAGCTTAAGCCCCAAGAAGTGAGGTGGGTTGTGGATCACTGACATGGTC AGGGGAGGCCCACACCTCAATTCAGTAACCACCTAATCTCTCCCCCAACCTGATCTCTCATCAGAGCTGGCAGCAACTTGGGATTCCTTT CCTTTTTCCTGCCTAACTTTTCATTGAAATGTCTAGTAGGAGAGTGAGAAAAGAGAACAAAGGCTGGGTCACAGTCATAGAATGTTACAG CTGGAATGGGCATGGAAATCATCCAAGTTAAACTTCTTCTCTGCCCCCCGCCCCCACTTTTTTTTTTTTTTTTTTTTAACCAAACGAACT TGTGATCCAGTGCCCTATTTTATAGTGTGGTTTTCCAGGGTCTGAATAAATAATCATTAAAGTTTGACACACGCAGACACACGCACCAAT GATGGGGATACCCCCAAATGATTTAGGAGGTTATTTTATTTTAATAGTTTTTTCTTCCTGATTTTTTTCAGTTAGTTAGAGTTAAATGTA CCTATAGCCCCTGAATACATGCTCAGGTAGAGAAAGTCTCCATAGTATAAGTAAGTAATATGAATGTGGAATCTTGGAAAGTGATATATT TTGATTGGAATAATTTTAATTAAATTTAATGATTTTAATTAAGAATTAAAAGCCAGCTAGCCAAATTTTCTTTAAAAATTGGAAACTCAT TATGGTCTTAAATTGTCCTCAGGCAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATACCTGGTTATGAA TTCTCAAAAGAGAAAGCAGGTCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAAGAGATTTTCTTCTGAAGATGATCT AGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTCTGAAGAAGATTGTAGAAAAGAGACTAAGATATATGCAAGGGTCACC AGTTTAGAGATCAGTCAAATTGGAAAAAGTGCCAAGACTGGATGTGCAGATTGTTCTATGTATTATCAGTATTTTTTTCCTCTTAAGAAA AAAATTTACTCTCTCTCCTTTGTGAGTAAATGCCTCCTTAATGCCTTTTAAGTAAGGTGGCAACTTTTAACTGTCATCTTGTGAGAGGCA ACCTCAAACTCTAAGCAGACTCCCTCTCTCCCTTTCTGGTGTCTTAAATCAAGAACTAGTTTGAAGCCAAGGCAAAGCAAGGTTTGTTCA TCTTCCTTTCCTGTCATTTAAGGTAAAACAGGCAATGAACTCGCTCTTCAAATACCATAGTTCAAGAGTAGCTGTTGGCCCTGGTTCCAG ATTAATATAGCAGCAGGCAGATTGCCCCTTCTTGGGGCCACCACCCTCCAAAGCTGTGCCACCAATGAGAGCATTGGGTTCAAGTTTGCA TCAAACATGGTATTACCAACGCTGAGCCTCCAGCAGAGCACTTAAAAGTCCTAGTGAGAGAATAGATACTATGCAAGGGAAAAAAATTTA AATGCCAACGAATAGTTTTTTTTTTTTTGAACCTGATACACTGTTTGTTTACTCTCAACTCTTTGTACAAATATTATTGTCCTAAGGGCC TTTTCCCCTCCTGCCTAGAAAATAGGTTGTGTATTGGTTTTATTCAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTG TGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACTTGGACCAGGGCATGCCCTGTTG GGGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACCAAAGTGCATTCTTCAATGTA >In-frame_ENST00000589222_ENST00000299563_TCGA-BH-A18R-01A_BCAS3_chr17_58786686_+_RNF169_chr11_74521229_length(amino acids)=623AA_start in transcript=68_stop in transcript=1939 MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKIVWVRFENADLNDTSRNLEFHEIHSTGNEPP LLIMIGYSDGMQVWSIPLREEKLQEEKPSEDQIHKLLPEDTETGKRKMDEQKKRDEPLVLKTNLERCPARLSDSENEEPSRGQMTQTHRS AFVSKNNSYSLAFLAGKLNSKVERSQSCSDTAQERAKSRVRAVPGNKAKVTTMTPASNPIIGVLLSTQNNRCVSAPDLTIEKRLPFSSLS SLASLHKPERSVSPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQKQTSYEASPRILKKWEQIFQERQIKK TLSKATLTSLAPEMGEELLGSEGIHSSKEKPLVAVNTRLSGGQVLSEYTGPTSADLDHFPSVSQTKAEQDSDNKSSTEIPLETCCSSELK GGGSGTSLEREQFEGLGSTPDAKLDKTCISRAMKITTVNSVLPQNSVLGGVLKTKQQLKTLNHFDLTNGVLVESLSEEPLPSLRRGRKRH -------------------------------------------------------------- >In-frame_ENST00000407086_ENST00000299563_TCGA-BH-A18R-01A_BCAS3_chr17_58786686_+_RNF169_chr11_74521229_length(transcript)=7603nt_BP=369nt TGAGCCTAGAGCTGGAGACTAGCGTTAACCGGCGGGGCGGCCGGTTTTATGAATGAAGCTATGGCTACAGATTCCCCAAGAAGACCCAGT CGTTGTACTGGTGGAGTTGTGGTTCGCCCCCAGGCTGTCACAGAGCAGTCCTACATGGAAAGTGTTGTGACTTTTCTGCAGGATGTTGTG CCACAGGCTTACAGTGGAACACCTCTAACAGAAGAAAAGGAGAAAATAGTCTGGGTCAGATTTGAAAATGCAGATTTAAATGATACATCA AGAAATCTGGAATTTCATGAAATACATAGTACTGGGAATGAACCGCCTTTGTTGATTATGATTGGCTACAGTGATGGAATGCAGGTCTGG AGCATCCCTCTGAGAGAAGAAAAGTTACAAGAGGAAAAACCCTCTGAAGATCAAATCCACAAGCTGTTACCAGAGGATACAGAAACAGGG AAAAGGAAAATGGATGAACAGAAAAAAAGAGATGAACCATTAGTACTGAAAACAAATCTGGAACGTTGTCCTGCACGTCTCTCAGATTCA GAGAATGAAGAACCTTCTCGAGGCCAGATGACACAGACACATCGCTCGGCATTTGTTTCCAAGAACAACTCCTACTCCTTAGCTTTCCTG GCAGGGAAGCTAAACTCCAAGGTGGAAAGGAGTCAGAGCTGTAGTGACACAGCCCAGGAAAGAGCGAAGAGCAGAGTCAGAGCAGTTCCA GGCAACAAAGCCAAGGTCACAACTATGACTCCAGCCTCCAACCCCATCATTGGTGTCCTCTTGTCAACTCAAAACAACCGCTGCGTCTCG GCCCCTGACTTAACCATCGAAAAGCGTCTACCCTTCAGCTCCCTTTCATCCTTGGCTTCCCTGCATAAGCCAGAGCGTTCTGTCAGCCCT GAGAGCAATGACAGCATCTCCGAAGAACTAAACCATTTCAAGCCCATTGTCTGCTCACCATGTACTCCTCCCAAGAGACTCCCTGATGGC CGTGTGCTAAGTCCTCTCATCATCAAATCAACTCCACGCAACCTAAACAGAAGCCTGCAGAAGCAGACTTCTTATGAGGCCAGTCCACGG ATCCTCAAAAAGTGGGAACAGATCTTTCAGGAGCGGCAGATCAAAAAGACCCTTTCAAAAGCCACTCTTACCTCTCTGGCTCCTGAAATG GGGGAAGAGTTACTAGGCTCTGAAGGTATCCATTCTAGCAAGGAGAAGCCACTTGTGGCTGTAAATACAAGATTATCTGGTGGGCAGGTC CTCTCTGAGTATACTGGACCCACCTCTGCTGATCTTGATCATTTCCCCTCTGTTAGCCAAACAAAAGCAGAACAGGACAGTGATAATAAA AGTAGCACTGAGATCCCACTGGAAACCTGCTGTTCCTCAGAACTCAAAGGGGGAGGCAGTGGGACTTCTTTGGAGAGGGAGCAGTTTGAG GGGTTAGGGTCAACTCCAGATGCCAAGTTAGACAAAACCTGTATAAGCAGAGCCATGAAAATCACCACAGTTAATTCAGTGCTACCCCAA AACAGTGTTTTGGGTGGAGTCCTCAAAACAAAGCAACAATTGAAGACATTAAATCATTTTGATCTGACTAATGGTGTTCTAGTTGAGAGC CTAAGTGAAGAGCCACTTCCTTCTTTGCGTCGAGGCCGGAAAAGACACTGCAAGACCAAGCACTTAGAACAAAATGGCTCCCTTAAAAAA CTGCGACAAACCAGTGGGGAGGTGGGTCTGGCCCCAACAGACCCAGTCCTGCGAGAGATGGAGCAGAAGCTTCAGCAAGAGGAAGAAGAC CGACAGTTGGCTCTGCAGTTGCAGCGCATGTTCGACAATGAGAGGCGGACTGTGAGCCGGCGAAAAGGAAGTGTGGATCAGTATCTCCTA CGGTCCAGCAACATGGCCGGGGCCAAGTAGCACCTAATGAAGTGTTACCTATTTTTAAAAGGTCTTAGGCCTTGATCATTTATCCTGAAG AGCTGAGTGTTCTCACTTTGGTTTTATTTTAATGGCAAAACACTGTCTAATATGGTTCTGAGAGGTTCCAGGGCCTTTGTAGTCAATATC CAAGGGAAAAGCATCTCCGTTTCTCTGTGACCCAGGCCAGAAGCCTGAGTGACCCATCCCTAAGGGCTTCTGGGCCAAACCTGGCAGCAC CCACTGGGAATGAGATTTGGAACGGCCTCAGGAGCATAATGGCCACAGTTAGTAATGGTAAAGAGGGGATACCTTCTTAAACTGATAGAC TTCCTGACTTCTTTCAGCAGGGTATTGTTTTAAATCAGCCTTGCAGATAAAAATTAATTCCATCTTTTTCAGACAAGTGAACAATTTAGT TCCTTGGCAGATCCAAAATGATAGATGGTTATGTTACGCTTTCTGCTGTCCCTTGCCAAAAATAAGTAAATATATCAGTTAAGATTATGC CTTTACAAAAGTTAATTTACATTCTCTGTTTAAAAAATAATATTTGGTGAATGCTATATAGTTGACAGAGCACATTTACAGACCTTATTA ATTTAGTCTTTCCAAGAGACCTCTCATGTAACTGGCATTAGCCCCATTTTTAGATGATGAAACTGCAGTGCAGATGTTCTGGTTCTCTCA ACTACCAAGTGGCATAACCCATGGATTTTCTAAAGGTTTCCCAAATAGATCACAACCTAAGGGTGTGCCAGGGGAGCCTAGGGGAAGCTA GGCTGGGCATTGAACACTGATAGTGCAGAATCCACATGCAAACAAGATCGACAGGGTGGATAAACATATATGTGCATTATCCCCATCCCC CACAGTTTAGAGCCTTCTGCTTTTCTGGGGGTTTCAGCCTATGAGACAAACTATAATCAGGCTTCATTATTACTTTTCAAATGGCCAAGG GTTATCTGCAATGTTGATCTAAAATCCTAAAAAATCACCCTGAAGTCAGGCAAGGAACAATACTTAAACTCCATACTATGGAAACAAGGT ATCTAGCTGGATGCAGCTGGTAAATTCAGTCCCATGGACCTTTGGGGGTTTATTTTCCTTAGCAGCTGACACCATGTGTCTTTTGCATCC CTGGTGGTGCTTGGTGCTTCTGCCCATCTGGGCTCATTGAGAATAGGGATGAAGATATGATTTTAGGGAATTTCTGATGGGCTGGCATGC CCCATGTAGTATGAGTTACTATATAAAGTCATGTGACTGGCATTTTAACAGACCTTCCAGAGCTTATATATCCCAATATATGTTGTTTCC TTTGAGTAGCCCCAGCAGGATACTGCTTAGTTTTTCCAGTGCCATTGGTGAAAGCATTTCTGGAACTGTCTTCAAAGACTAGAAACACTG ACTCCCAAAATGCTAGAACTGGAAGGGACCTTAATGGTTATCTATTCCAGCCTCCTCCTAAGGTCCTCCTCAGCTTCTAGACCTAGAAGC CAAAGTCCAGAACAGTGACCCATTGATCAAGGCAGATAGTATAACTCCTTTTAAGTGTTCTCAGATTTGCCTTTTCTCAGGGCAAATCTT CAGTGTTTTGTGGTTATTTGTGGTTGAGAGAGAGAGAGAATGTAATGTCTGAGACTAGCCAGCAGCTATTTGAAGCCTCTGGGAAAGAAG GTGGCTTATCAAGTGGGTTTGTAGTAATGAGTGCTGCTGTAAAGCAGAGCCATTTTCTTGTGCAGCTCATAGTTCCCAAACAGTTCCCAA ACAGAAATTCCAGAGATGTCTTAAACATTGTGGTCATCATTGAGATAGGTGGAATCTCTTTGGTGACTACGTTGGTGGGGAACATCACTC ACCTGAATGTATGCATTCTGTGTTCTCTGTGTGTGTGCACATATGCAGATGTATGTTTTAAAAACATTTACCAAACTCATGATTTTGTAG TCACACCACTTCAGTTCTGGGCCCTACCAACAATTTATGTCCTCCAAGAGCTGCTGGAGGGCATGTTTGTGCCCAAAACAGAAGAGCTGG CTCTGGTTTACAGAAGACAGGGAGGGTGACCTTACTATAAATGCCCTTAGAGGAAACTTATCAGTTACTGCCATTTCACGCATTTCCTTT TTGATCTTAGTAAATATTATTGGAAGGCTAGTCTTGTTGGTAGGAGCAAAGACACTTATTTTTCCACTTGCCATCTTTCTCTATATCTCC AGTAATTTGAAAAACACTTTTCAGTTGGAATTGATTTTTGTCTTTGGTAAAAAGAAATATTTTTAATAGATAAAAGATATATATTTTAAA TATTTCCCCAAATTAATACTTTCATTTTAAGAATTGCATAGCAGTTGTAACAAGTGCAGAATGAAGAACAAATTCTTGTTAAGCAAATAG TCCAAACTCTAGGTCCAGCTTACTGCCTTCCCCCCTTGTACCTACAGTGATGCCTAGGATGGTATTGACAGTTGTTTTCTAAACTTCCTG CTGAGCAACAGTCCTTCAAATATAGGTAGAGTGGTCTAGGTTAAGGAGGGAGGAGGGTTGATCTTTAATCAGGTTGGCTTTGGAGGAAGG AAAAACCACTAAGGTATTATCTGAATTTTAAGATGCTTCCCATCCTTAATAACTAAAACCTGAATGCTTTTCTTTCTGAAAAATCTCCCT CTCTCCTTCCATGATTCTGAAGTTGGTTAAAAGTCGATATGTTGATGTGTATTATTTGGGGGAACAGAAAAGGACAAGGAAGGAAACAGA ACGATGGGAAGGGTTTGTGAGCTAGAATAAGAGGTGCAGGATTTCACAAAACAAATTCCTCACAAATCATTGAAGCCCAGTTCACCATAC AAATTACCCATGTCTTACTCTGTTCCTTGTATATATGCATTCTGGGTTTTTTTATTATTAAAGGGGAAGTTAGGGGGGAGGGTGAAGGTC AGTCTGAGGGGAAATCCAGGAAATGTGGTGCCCTTAGAAGGGGGCTGTCAGCTCTTTTCCATAGAGAGGGAAAGAAACTTTGAGAAAATG TTCTTGACCCATTGATTGTATCTGCTGGAAGAAGTCATCTGGGCCTGTTGGGTTGGTATCAGATCAGGGGATTATGCATCCAGCCCCTGG CCCCTTTAATCTATTTGCCTCTTTTTAAAAAAGGTTAAGTCTTCTTGGGTGAGGCTTGCCAGGGAAACTCCTAAGTGGCTTCACTTATTT TTTAAATTTTAATTTAATTTTTAAATTTTTGCTTGGAAGCAGCACTGGTAATAAATGTTTTATTTTTTGTTCATTTTCCCTAAAGGAAAA ATGTCCTTAAGAGATTAAAGCTCTTAATTGATTACTGTCTGGTTACAAACTGGCAAACTGACTAAAATGGGAAGCTGCCACCGTGCCTGA CTCATGTAGCTGATGACCGAAGGCTCATCCTTTCTTTTCTATTTGACAGACATTTACTGAGCTTCAGACTTGAGCCAACCCTGAGCTGGA CTGTGGAGATAAAGCAGTTCCTGCTCTTGAGGAGCTCAATGTCTAATGGAATGCATTTGAATGTATGTGTGGCTGGAGAGTTCATTTATG GTCTTAGGAAAGCCATTTCTGGTCCCATTTAGAAAACTGACCAGCACCCAGCAAGCTGCATTCTACATTTTAGAGACCCCATTGGTATTT GTGAATTTGATTGCACCACCGCTTTTCCTTTACTAAGTAATGTTATGGAAGGAGAATGAATTTTCTCCTCTAGTGATTACAGGACATTAA CATCTCTTCAGAAGCTGCTTTTAGCTTAAGCCCCAAGAAGTGAGGTGGGTTGTGGATCACTGACATGGTCAGGGGAGGCCCACACCTCAA TTCAGTAACCACCTAATCTCTCCCCCAACCTGATCTCTCATCAGAGCTGGCAGCAACTTGGGATTCCTTTCCTTTTTCCTGCCTAACTTT TCATTGAAATGTCTAGTAGGAGAGTGAGAAAAGAGAACAAAGGCTGGGTCACAGTCATAGAATGTTACAGCTGGAATGGGCATGGAAATC ATCCAAGTTAAACTTCTTCTCTGCCCCCCGCCCCCACTTTTTTTTTTTTTTTTTTTTAACCAAACGAACTTGTGATCCAGTGCCCTATTT TATAGTGTGGTTTTCCAGGGTCTGAATAAATAATCATTAAAGTTTGACACACGCAGACACACGCACCAATGATGGGGATACCCCCAAATG ATTTAGGAGGTTATTTTATTTTAATAGTTTTTTCTTCCTGATTTTTTTCAGTTAGTTAGAGTTAAATGTACCTATAGCCCCTGAATACAT GCTCAGGTAGAGAAAGTCTCCATAGTATAAGTAAGTAATATGAATGTGGAATCTTGGAAAGTGATATATTTTGATTGGAATAATTTTAAT TAAATTTAATGATTTTAATTAAGAATTAAAAGCCAGCTAGCCAAATTTTCTTTAAAAATTGGAAACTCATTATGGTCTTAAATTGTCCTC AGGCAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATACCTGGTTATGAATTCTCAAAAGAGAAAGCAGG TCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAAGAGATTTTCTTCTGAAGATGATCTAGGAAATGCATCTTTATACA TGATTGTTAGCTGCTGTAGCTTTCTGAAGAAGATTGTAGAAAAGAGACTAAGATATATGCAAGGGTCACCAGTTTAGAGATCAGTCAAAT TGGAAAAAGTGCCAAGACTGGATGTGCAGATTGTTCTATGTATTATCAGTATTTTTTTCCTCTTAAGAAAAAAATTTACTCTCTCTCCTT TGTGAGTAAATGCCTCCTTAATGCCTTTTAAGTAAGGTGGCAACTTTTAACTGTCATCTTGTGAGAGGCAACCTCAAACTCTAAGCAGAC TCCCTCTCTCCCTTTCTGGTGTCTTAAATCAAGAACTAGTTTGAAGCCAAGGCAAAGCAAGGTTTGTTCATCTTCCTTTCCTGTCATTTA AGGTAAAACAGGCAATGAACTCGCTCTTCAAATACCATAGTTCAAGAGTAGCTGTTGGCCCTGGTTCCAGATTAATATAGCAGCAGGCAG ATTGCCCCTTCTTGGGGCCACCACCCTCCAAAGCTGTGCCACCAATGAGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAAC GCTGAGCCTCCAGCAGAGCACTTAAAAGTCCTAGTGAGAGAATAGATACTATGCAAGGGAAAAAAATTTAAATGCCAACGAATAGTTTTT TTTTTTTTGAACCTGATACACTGTTTGTTTACTCTCAACTCTTTGTACAAATATTATTGTCCTAAGGGCCTTTTCCCCTCCTGCCTAGAA AATAGGTTGTGTATTGGTTTTATTCAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTG CCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACTTGGACCAGGGCATGCCCTGTTGGGGATGTTTCTGTCAGCAAG GACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACCAAAGTGCATTCTTCAATGTATGTTTGCCTGCTTGAAGCAA >In-frame_ENST00000407086_ENST00000299563_TCGA-BH-A18R-01A_BCAS3_chr17_58786686_+_RNF169_chr11_74521229_length(amino acids)=623AA_start in transcript=48_stop in transcript=1919 MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKIVWVRFENADLNDTSRNLEFHEIHSTGNEPP LLIMIGYSDGMQVWSIPLREEKLQEEKPSEDQIHKLLPEDTETGKRKMDEQKKRDEPLVLKTNLERCPARLSDSENEEPSRGQMTQTHRS AFVSKNNSYSLAFLAGKLNSKVERSQSCSDTAQERAKSRVRAVPGNKAKVTTMTPASNPIIGVLLSTQNNRCVSAPDLTIEKRLPFSSLS SLASLHKPERSVSPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQKQTSYEASPRILKKWEQIFQERQIKK TLSKATLTSLAPEMGEELLGSEGIHSSKEKPLVAVNTRLSGGQVLSEYTGPTSADLDHFPSVSQTKAEQDSDNKSSTEIPLETCCSSELK GGGSGTSLEREQFEGLGSTPDAKLDKTCISRAMKITTVNSVLPQNSVLGGVLKTKQQLKTLNHFDLTNGVLVESLSEEPLPSLRRGRKRH -------------------------------------------------------------- >In-frame_ENST00000390652_ENST00000299563_TCGA-BH-A18R-01A_BCAS3_chr17_58786686_+_RNF169_chr11_74521229_length(transcript)=7586nt_BP=352nt ACTAGCGTTAACCGGCGGGGCGGCCGGTTTTATGAATGAAGCTATGGCTACAGATTCCCCAAGAAGACCCAGTCGTTGTACTGGTGGAGT TGTGGTTCGCCCCCAGGCTGTCACAGAGCAGTCCTACATGGAAAGTGTTGTGACTTTTCTGCAGGATGTTGTGCCACAGGCTTACAGTGG AACACCTCTAACAGAAGAAAAGGAGAAAATAGTCTGGGTCAGATTTGAAAATGCAGATTTAAATGATACATCAAGAAATCTGGAATTTCA TGAAATACATAGTACTGGGAATGAACCGCCTTTGTTGATTATGATTGGCTACAGTGATGGAATGCAGGTCTGGAGCATCCCTCTGAGAGA AGAAAAGTTACAAGAGGAAAAACCCTCTGAAGATCAAATCCACAAGCTGTTACCAGAGGATACAGAAACAGGGAAAAGGAAAATGGATGA ACAGAAAAAAAGAGATGAACCATTAGTACTGAAAACAAATCTGGAACGTTGTCCTGCACGTCTCTCAGATTCAGAGAATGAAGAACCTTC TCGAGGCCAGATGACACAGACACATCGCTCGGCATTTGTTTCCAAGAACAACTCCTACTCCTTAGCTTTCCTGGCAGGGAAGCTAAACTC CAAGGTGGAAAGGAGTCAGAGCTGTAGTGACACAGCCCAGGAAAGAGCGAAGAGCAGAGTCAGAGCAGTTCCAGGCAACAAAGCCAAGGT CACAACTATGACTCCAGCCTCCAACCCCATCATTGGTGTCCTCTTGTCAACTCAAAACAACCGCTGCGTCTCGGCCCCTGACTTAACCAT CGAAAAGCGTCTACCCTTCAGCTCCCTTTCATCCTTGGCTTCCCTGCATAAGCCAGAGCGTTCTGTCAGCCCTGAGAGCAATGACAGCAT CTCCGAAGAACTAAACCATTTCAAGCCCATTGTCTGCTCACCATGTACTCCTCCCAAGAGACTCCCTGATGGCCGTGTGCTAAGTCCTCT CATCATCAAATCAACTCCACGCAACCTAAACAGAAGCCTGCAGAAGCAGACTTCTTATGAGGCCAGTCCACGGATCCTCAAAAAGTGGGA ACAGATCTTTCAGGAGCGGCAGATCAAAAAGACCCTTTCAAAAGCCACTCTTACCTCTCTGGCTCCTGAAATGGGGGAAGAGTTACTAGG CTCTGAAGGTATCCATTCTAGCAAGGAGAAGCCACTTGTGGCTGTAAATACAAGATTATCTGGTGGGCAGGTCCTCTCTGAGTATACTGG ACCCACCTCTGCTGATCTTGATCATTTCCCCTCTGTTAGCCAAACAAAAGCAGAACAGGACAGTGATAATAAAAGTAGCACTGAGATCCC ACTGGAAACCTGCTGTTCCTCAGAACTCAAAGGGGGAGGCAGTGGGACTTCTTTGGAGAGGGAGCAGTTTGAGGGGTTAGGGTCAACTCC AGATGCCAAGTTAGACAAAACCTGTATAAGCAGAGCCATGAAAATCACCACAGTTAATTCAGTGCTACCCCAAAACAGTGTTTTGGGTGG AGTCCTCAAAACAAAGCAACAATTGAAGACATTAAATCATTTTGATCTGACTAATGGTGTTCTAGTTGAGAGCCTAAGTGAAGAGCCACT TCCTTCTTTGCGTCGAGGCCGGAAAAGACACTGCAAGACCAAGCACTTAGAACAAAATGGCTCCCTTAAAAAACTGCGACAAACCAGTGG GGAGGTGGGTCTGGCCCCAACAGACCCAGTCCTGCGAGAGATGGAGCAGAAGCTTCAGCAAGAGGAAGAAGACCGACAGTTGGCTCTGCA GTTGCAGCGCATGTTCGACAATGAGAGGCGGACTGTGAGCCGGCGAAAAGGAAGTGTGGATCAGTATCTCCTACGGTCCAGCAACATGGC CGGGGCCAAGTAGCACCTAATGAAGTGTTACCTATTTTTAAAAGGTCTTAGGCCTTGATCATTTATCCTGAAGAGCTGAGTGTTCTCACT TTGGTTTTATTTTAATGGCAAAACACTGTCTAATATGGTTCTGAGAGGTTCCAGGGCCTTTGTAGTCAATATCCAAGGGAAAAGCATCTC CGTTTCTCTGTGACCCAGGCCAGAAGCCTGAGTGACCCATCCCTAAGGGCTTCTGGGCCAAACCTGGCAGCACCCACTGGGAATGAGATT TGGAACGGCCTCAGGAGCATAATGGCCACAGTTAGTAATGGTAAAGAGGGGATACCTTCTTAAACTGATAGACTTCCTGACTTCTTTCAG CAGGGTATTGTTTTAAATCAGCCTTGCAGATAAAAATTAATTCCATCTTTTTCAGACAAGTGAACAATTTAGTTCCTTGGCAGATCCAAA ATGATAGATGGTTATGTTACGCTTTCTGCTGTCCCTTGCCAAAAATAAGTAAATATATCAGTTAAGATTATGCCTTTACAAAAGTTAATT TACATTCTCTGTTTAAAAAATAATATTTGGTGAATGCTATATAGTTGACAGAGCACATTTACAGACCTTATTAATTTAGTCTTTCCAAGA GACCTCTCATGTAACTGGCATTAGCCCCATTTTTAGATGATGAAACTGCAGTGCAGATGTTCTGGTTCTCTCAACTACCAAGTGGCATAA CCCATGGATTTTCTAAAGGTTTCCCAAATAGATCACAACCTAAGGGTGTGCCAGGGGAGCCTAGGGGAAGCTAGGCTGGGCATTGAACAC TGATAGTGCAGAATCCACATGCAAACAAGATCGACAGGGTGGATAAACATATATGTGCATTATCCCCATCCCCCACAGTTTAGAGCCTTC TGCTTTTCTGGGGGTTTCAGCCTATGAGACAAACTATAATCAGGCTTCATTATTACTTTTCAAATGGCCAAGGGTTATCTGCAATGTTGA TCTAAAATCCTAAAAAATCACCCTGAAGTCAGGCAAGGAACAATACTTAAACTCCATACTATGGAAACAAGGTATCTAGCTGGATGCAGC TGGTAAATTCAGTCCCATGGACCTTTGGGGGTTTATTTTCCTTAGCAGCTGACACCATGTGTCTTTTGCATCCCTGGTGGTGCTTGGTGC TTCTGCCCATCTGGGCTCATTGAGAATAGGGATGAAGATATGATTTTAGGGAATTTCTGATGGGCTGGCATGCCCCATGTAGTATGAGTT ACTATATAAAGTCATGTGACTGGCATTTTAACAGACCTTCCAGAGCTTATATATCCCAATATATGTTGTTTCCTTTGAGTAGCCCCAGCA GGATACTGCTTAGTTTTTCCAGTGCCATTGGTGAAAGCATTTCTGGAACTGTCTTCAAAGACTAGAAACACTGACTCCCAAAATGCTAGA ACTGGAAGGGACCTTAATGGTTATCTATTCCAGCCTCCTCCTAAGGTCCTCCTCAGCTTCTAGACCTAGAAGCCAAAGTCCAGAACAGTG ACCCATTGATCAAGGCAGATAGTATAACTCCTTTTAAGTGTTCTCAGATTTGCCTTTTCTCAGGGCAAATCTTCAGTGTTTTGTGGTTAT TTGTGGTTGAGAGAGAGAGAGAATGTAATGTCTGAGACTAGCCAGCAGCTATTTGAAGCCTCTGGGAAAGAAGGTGGCTTATCAAGTGGG TTTGTAGTAATGAGTGCTGCTGTAAAGCAGAGCCATTTTCTTGTGCAGCTCATAGTTCCCAAACAGTTCCCAAACAGAAATTCCAGAGAT GTCTTAAACATTGTGGTCATCATTGAGATAGGTGGAATCTCTTTGGTGACTACGTTGGTGGGGAACATCACTCACCTGAATGTATGCATT CTGTGTTCTCTGTGTGTGTGCACATATGCAGATGTATGTTTTAAAAACATTTACCAAACTCATGATTTTGTAGTCACACCACTTCAGTTC TGGGCCCTACCAACAATTTATGTCCTCCAAGAGCTGCTGGAGGGCATGTTTGTGCCCAAAACAGAAGAGCTGGCTCTGGTTTACAGAAGA CAGGGAGGGTGACCTTACTATAAATGCCCTTAGAGGAAACTTATCAGTTACTGCCATTTCACGCATTTCCTTTTTGATCTTAGTAAATAT TATTGGAAGGCTAGTCTTGTTGGTAGGAGCAAAGACACTTATTTTTCCACTTGCCATCTTTCTCTATATCTCCAGTAATTTGAAAAACAC TTTTCAGTTGGAATTGATTTTTGTCTTTGGTAAAAAGAAATATTTTTAATAGATAAAAGATATATATTTTAAATATTTCCCCAAATTAAT ACTTTCATTTTAAGAATTGCATAGCAGTTGTAACAAGTGCAGAATGAAGAACAAATTCTTGTTAAGCAAATAGTCCAAACTCTAGGTCCA GCTTACTGCCTTCCCCCCTTGTACCTACAGTGATGCCTAGGATGGTATTGACAGTTGTTTTCTAAACTTCCTGCTGAGCAACAGTCCTTC AAATATAGGTAGAGTGGTCTAGGTTAAGGAGGGAGGAGGGTTGATCTTTAATCAGGTTGGCTTTGGAGGAAGGAAAAACCACTAAGGTAT TATCTGAATTTTAAGATGCTTCCCATCCTTAATAACTAAAACCTGAATGCTTTTCTTTCTGAAAAATCTCCCTCTCTCCTTCCATGATTC TGAAGTTGGTTAAAAGTCGATATGTTGATGTGTATTATTTGGGGGAACAGAAAAGGACAAGGAAGGAAACAGAACGATGGGAAGGGTTTG TGAGCTAGAATAAGAGGTGCAGGATTTCACAAAACAAATTCCTCACAAATCATTGAAGCCCAGTTCACCATACAAATTACCCATGTCTTA CTCTGTTCCTTGTATATATGCATTCTGGGTTTTTTTATTATTAAAGGGGAAGTTAGGGGGGAGGGTGAAGGTCAGTCTGAGGGGAAATCC AGGAAATGTGGTGCCCTTAGAAGGGGGCTGTCAGCTCTTTTCCATAGAGAGGGAAAGAAACTTTGAGAAAATGTTCTTGACCCATTGATT GTATCTGCTGGAAGAAGTCATCTGGGCCTGTTGGGTTGGTATCAGATCAGGGGATTATGCATCCAGCCCCTGGCCCCTTTAATCTATTTG CCTCTTTTTAAAAAAGGTTAAGTCTTCTTGGGTGAGGCTTGCCAGGGAAACTCCTAAGTGGCTTCACTTATTTTTTAAATTTTAATTTAA TTTTTAAATTTTTGCTTGGAAGCAGCACTGGTAATAAATGTTTTATTTTTTGTTCATTTTCCCTAAAGGAAAAATGTCCTTAAGAGATTA AAGCTCTTAATTGATTACTGTCTGGTTACAAACTGGCAAACTGACTAAAATGGGAAGCTGCCACCGTGCCTGACTCATGTAGCTGATGAC CGAAGGCTCATCCTTTCTTTTCTATTTGACAGACATTTACTGAGCTTCAGACTTGAGCCAACCCTGAGCTGGACTGTGGAGATAAAGCAG TTCCTGCTCTTGAGGAGCTCAATGTCTAATGGAATGCATTTGAATGTATGTGTGGCTGGAGAGTTCATTTATGGTCTTAGGAAAGCCATT TCTGGTCCCATTTAGAAAACTGACCAGCACCCAGCAAGCTGCATTCTACATTTTAGAGACCCCATTGGTATTTGTGAATTTGATTGCACC ACCGCTTTTCCTTTACTAAGTAATGTTATGGAAGGAGAATGAATTTTCTCCTCTAGTGATTACAGGACATTAACATCTCTTCAGAAGCTG CTTTTAGCTTAAGCCCCAAGAAGTGAGGTGGGTTGTGGATCACTGACATGGTCAGGGGAGGCCCACACCTCAATTCAGTAACCACCTAAT CTCTCCCCCAACCTGATCTCTCATCAGAGCTGGCAGCAACTTGGGATTCCTTTCCTTTTTCCTGCCTAACTTTTCATTGAAATGTCTAGT AGGAGAGTGAGAAAAGAGAACAAAGGCTGGGTCACAGTCATAGAATGTTACAGCTGGAATGGGCATGGAAATCATCCAAGTTAAACTTCT TCTCTGCCCCCCGCCCCCACTTTTTTTTTTTTTTTTTTTTAACCAAACGAACTTGTGATCCAGTGCCCTATTTTATAGTGTGGTTTTCCA GGGTCTGAATAAATAATCATTAAAGTTTGACACACGCAGACACACGCACCAATGATGGGGATACCCCCAAATGATTTAGGAGGTTATTTT ATTTTAATAGTTTTTTCTTCCTGATTTTTTTCAGTTAGTTAGAGTTAAATGTACCTATAGCCCCTGAATACATGCTCAGGTAGAGAAAGT CTCCATAGTATAAGTAAGTAATATGAATGTGGAATCTTGGAAAGTGATATATTTTGATTGGAATAATTTTAATTAAATTTAATGATTTTA ATTAAGAATTAAAAGCCAGCTAGCCAAATTTTCTTTAAAAATTGGAAACTCATTATGGTCTTAAATTGTCCTCAGGCAGCCTTTTCCTCA TCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATACCTGGTTATGAATTCTCAAAAGAGAAAGCAGGTCTGGGGCGGGGTGGTC AGGAGACAGATTCTAGGGAAAGTGCTGAAGAGATTTTCTTCTGAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGT AGCTTTCTGAAGAAGATTGTAGAAAAGAGACTAAGATATATGCAAGGGTCACCAGTTTAGAGATCAGTCAAATTGGAAAAAGTGCCAAGA CTGGATGTGCAGATTGTTCTATGTATTATCAGTATTTTTTTCCTCTTAAGAAAAAAATTTACTCTCTCTCCTTTGTGAGTAAATGCCTCC TTAATGCCTTTTAAGTAAGGTGGCAACTTTTAACTGTCATCTTGTGAGAGGCAACCTCAAACTCTAAGCAGACTCCCTCTCTCCCTTTCT GGTGTCTTAAATCAAGAACTAGTTTGAAGCCAAGGCAAAGCAAGGTTTGTTCATCTTCCTTTCCTGTCATTTAAGGTAAAACAGGCAATG AACTCGCTCTTCAAATACCATAGTTCAAGAGTAGCTGTTGGCCCTGGTTCCAGATTAATATAGCAGCAGGCAGATTGCCCCTTCTTGGGG CCACCACCCTCCAAAGCTGTGCCACCAATGAGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCAGCAGA GCACTTAAAAGTCCTAGTGAGAGAATAGATACTATGCAAGGGAAAAAAATTTAAATGCCAACGAATAGTTTTTTTTTTTTTGAACCTGAT ACACTGTTTGTTTACTCTCAACTCTTTGTACAAATATTATTGTCCTAAGGGCCTTTTCCCCTCCTGCCTAGAAAATAGGTTGTGTATTGG TTTTATTCAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCAT CAGAAGAGCATTTTGACAAAGACAGAGGACTTGGACCAGGGCATGCCCTGTTGGGGATGTTTCTGTCAGCAAGGACATGGCATGGAATCA AGTGGGCTGATGTGTTGTTATTTAAACAGTACCAAAGTGCATTCTTCAATGTATGTTTGCCTGCTTGAAGCAAGGCCCAAGTTGAGAATA >In-frame_ENST00000390652_ENST00000299563_TCGA-BH-A18R-01A_BCAS3_chr17_58786686_+_RNF169_chr11_74521229_length(amino acids)=623AA_start in transcript=31_stop in transcript=1902 MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKIVWVRFENADLNDTSRNLEFHEIHSTGNEPP LLIMIGYSDGMQVWSIPLREEKLQEEKPSEDQIHKLLPEDTETGKRKMDEQKKRDEPLVLKTNLERCPARLSDSENEEPSRGQMTQTHRS AFVSKNNSYSLAFLAGKLNSKVERSQSCSDTAQERAKSRVRAVPGNKAKVTTMTPASNPIIGVLLSTQNNRCVSAPDLTIEKRLPFSSLS SLASLHKPERSVSPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQKQTSYEASPRILKKWEQIFQERQIKK TLSKATLTSLAPEMGEELLGSEGIHSSKEKPLVAVNTRLSGGQVLSEYTGPTSADLDHFPSVSQTKAEQDSDNKSSTEIPLETCCSSELK GGGSGTSLEREQFEGLGSTPDAKLDKTCISRAMKITTVNSVLPQNSVLGGVLKTKQQLKTLNHFDLTNGVLVESLSEEPLPSLRRGRKRH -------------------------------------------------------------- >In-frame_ENST00000408905_ENST00000299563_TCGA-BH-A18R-01A_BCAS3_chr17_58786686_+_RNF169_chr11_74521229_length(transcript)=7555nt_BP=321nt ATGAATGAAGCTATGGCTACAGATTCCCCAAGAAGACCCAGTCGTTGTACTGGTGGAGTTGTGGTTCGCCCCCAGGCTGTCACAGAGCAG TCCTACATGGAAAGTGTTGTGACTTTTCTGCAGGATGTTGTGCCACAGGCTTACAGTGGAACACCTCTAACAGAAGAAAAGGAGAAAATA GTCTGGGTCAGATTTGAAAATGCAGATTTAAATGATACATCAAGAAATCTGGAATTTCATGAAATACATAGTACTGGGAATGAACCGCCT TTGTTGATTATGATTGGCTACAGTGATGGAATGCAGGTCTGGAGCATCCCTCTGAGAGAAGAAAAGTTACAAGAGGAAAAACCCTCTGAA GATCAAATCCACAAGCTGTTACCAGAGGATACAGAAACAGGGAAAAGGAAAATGGATGAACAGAAAAAAAGAGATGAACCATTAGTACTG AAAACAAATCTGGAACGTTGTCCTGCACGTCTCTCAGATTCAGAGAATGAAGAACCTTCTCGAGGCCAGATGACACAGACACATCGCTCG GCATTTGTTTCCAAGAACAACTCCTACTCCTTAGCTTTCCTGGCAGGGAAGCTAAACTCCAAGGTGGAAAGGAGTCAGAGCTGTAGTGAC ACAGCCCAGGAAAGAGCGAAGAGCAGAGTCAGAGCAGTTCCAGGCAACAAAGCCAAGGTCACAACTATGACTCCAGCCTCCAACCCCATC ATTGGTGTCCTCTTGTCAACTCAAAACAACCGCTGCGTCTCGGCCCCTGACTTAACCATCGAAAAGCGTCTACCCTTCAGCTCCCTTTCA TCCTTGGCTTCCCTGCATAAGCCAGAGCGTTCTGTCAGCCCTGAGAGCAATGACAGCATCTCCGAAGAACTAAACCATTTCAAGCCCATT GTCTGCTCACCATGTACTCCTCCCAAGAGACTCCCTGATGGCCGTGTGCTAAGTCCTCTCATCATCAAATCAACTCCACGCAACCTAAAC AGAAGCCTGCAGAAGCAGACTTCTTATGAGGCCAGTCCACGGATCCTCAAAAAGTGGGAACAGATCTTTCAGGAGCGGCAGATCAAAAAG ACCCTTTCAAAAGCCACTCTTACCTCTCTGGCTCCTGAAATGGGGGAAGAGTTACTAGGCTCTGAAGGTATCCATTCTAGCAAGGAGAAG CCACTTGTGGCTGTAAATACAAGATTATCTGGTGGGCAGGTCCTCTCTGAGTATACTGGACCCACCTCTGCTGATCTTGATCATTTCCCC TCTGTTAGCCAAACAAAAGCAGAACAGGACAGTGATAATAAAAGTAGCACTGAGATCCCACTGGAAACCTGCTGTTCCTCAGAACTCAAA GGGGGAGGCAGTGGGACTTCTTTGGAGAGGGAGCAGTTTGAGGGGTTAGGGTCAACTCCAGATGCCAAGTTAGACAAAACCTGTATAAGC AGAGCCATGAAAATCACCACAGTTAATTCAGTGCTACCCCAAAACAGTGTTTTGGGTGGAGTCCTCAAAACAAAGCAACAATTGAAGACA TTAAATCATTTTGATCTGACTAATGGTGTTCTAGTTGAGAGCCTAAGTGAAGAGCCACTTCCTTCTTTGCGTCGAGGCCGGAAAAGACAC TGCAAGACCAAGCACTTAGAACAAAATGGCTCCCTTAAAAAACTGCGACAAACCAGTGGGGAGGTGGGTCTGGCCCCAACAGACCCAGTC CTGCGAGAGATGGAGCAGAAGCTTCAGCAAGAGGAAGAAGACCGACAGTTGGCTCTGCAGTTGCAGCGCATGTTCGACAATGAGAGGCGG ACTGTGAGCCGGCGAAAAGGAAGTGTGGATCAGTATCTCCTACGGTCCAGCAACATGGCCGGGGCCAAGTAGCACCTAATGAAGTGTTAC CTATTTTTAAAAGGTCTTAGGCCTTGATCATTTATCCTGAAGAGCTGAGTGTTCTCACTTTGGTTTTATTTTAATGGCAAAACACTGTCT AATATGGTTCTGAGAGGTTCCAGGGCCTTTGTAGTCAATATCCAAGGGAAAAGCATCTCCGTTTCTCTGTGACCCAGGCCAGAAGCCTGA GTGACCCATCCCTAAGGGCTTCTGGGCCAAACCTGGCAGCACCCACTGGGAATGAGATTTGGAACGGCCTCAGGAGCATAATGGCCACAG TTAGTAATGGTAAAGAGGGGATACCTTCTTAAACTGATAGACTTCCTGACTTCTTTCAGCAGGGTATTGTTTTAAATCAGCCTTGCAGAT AAAAATTAATTCCATCTTTTTCAGACAAGTGAACAATTTAGTTCCTTGGCAGATCCAAAATGATAGATGGTTATGTTACGCTTTCTGCTG TCCCTTGCCAAAAATAAGTAAATATATCAGTTAAGATTATGCCTTTACAAAAGTTAATTTACATTCTCTGTTTAAAAAATAATATTTGGT GAATGCTATATAGTTGACAGAGCACATTTACAGACCTTATTAATTTAGTCTTTCCAAGAGACCTCTCATGTAACTGGCATTAGCCCCATT TTTAGATGATGAAACTGCAGTGCAGATGTTCTGGTTCTCTCAACTACCAAGTGGCATAACCCATGGATTTTCTAAAGGTTTCCCAAATAG ATCACAACCTAAGGGTGTGCCAGGGGAGCCTAGGGGAAGCTAGGCTGGGCATTGAACACTGATAGTGCAGAATCCACATGCAAACAAGAT CGACAGGGTGGATAAACATATATGTGCATTATCCCCATCCCCCACAGTTTAGAGCCTTCTGCTTTTCTGGGGGTTTCAGCCTATGAGACA AACTATAATCAGGCTTCATTATTACTTTTCAAATGGCCAAGGGTTATCTGCAATGTTGATCTAAAATCCTAAAAAATCACCCTGAAGTCA GGCAAGGAACAATACTTAAACTCCATACTATGGAAACAAGGTATCTAGCTGGATGCAGCTGGTAAATTCAGTCCCATGGACCTTTGGGGG TTTATTTTCCTTAGCAGCTGACACCATGTGTCTTTTGCATCCCTGGTGGTGCTTGGTGCTTCTGCCCATCTGGGCTCATTGAGAATAGGG ATGAAGATATGATTTTAGGGAATTTCTGATGGGCTGGCATGCCCCATGTAGTATGAGTTACTATATAAAGTCATGTGACTGGCATTTTAA CAGACCTTCCAGAGCTTATATATCCCAATATATGTTGTTTCCTTTGAGTAGCCCCAGCAGGATACTGCTTAGTTTTTCCAGTGCCATTGG TGAAAGCATTTCTGGAACTGTCTTCAAAGACTAGAAACACTGACTCCCAAAATGCTAGAACTGGAAGGGACCTTAATGGTTATCTATTCC AGCCTCCTCCTAAGGTCCTCCTCAGCTTCTAGACCTAGAAGCCAAAGTCCAGAACAGTGACCCATTGATCAAGGCAGATAGTATAACTCC TTTTAAGTGTTCTCAGATTTGCCTTTTCTCAGGGCAAATCTTCAGTGTTTTGTGGTTATTTGTGGTTGAGAGAGAGAGAGAATGTAATGT CTGAGACTAGCCAGCAGCTATTTGAAGCCTCTGGGAAAGAAGGTGGCTTATCAAGTGGGTTTGTAGTAATGAGTGCTGCTGTAAAGCAGA GCCATTTTCTTGTGCAGCTCATAGTTCCCAAACAGTTCCCAAACAGAAATTCCAGAGATGTCTTAAACATTGTGGTCATCATTGAGATAG GTGGAATCTCTTTGGTGACTACGTTGGTGGGGAACATCACTCACCTGAATGTATGCATTCTGTGTTCTCTGTGTGTGTGCACATATGCAG ATGTATGTTTTAAAAACATTTACCAAACTCATGATTTTGTAGTCACACCACTTCAGTTCTGGGCCCTACCAACAATTTATGTCCTCCAAG AGCTGCTGGAGGGCATGTTTGTGCCCAAAACAGAAGAGCTGGCTCTGGTTTACAGAAGACAGGGAGGGTGACCTTACTATAAATGCCCTT AGAGGAAACTTATCAGTTACTGCCATTTCACGCATTTCCTTTTTGATCTTAGTAAATATTATTGGAAGGCTAGTCTTGTTGGTAGGAGCA AAGACACTTATTTTTCCACTTGCCATCTTTCTCTATATCTCCAGTAATTTGAAAAACACTTTTCAGTTGGAATTGATTTTTGTCTTTGGT AAAAAGAAATATTTTTAATAGATAAAAGATATATATTTTAAATATTTCCCCAAATTAATACTTTCATTTTAAGAATTGCATAGCAGTTGT AACAAGTGCAGAATGAAGAACAAATTCTTGTTAAGCAAATAGTCCAAACTCTAGGTCCAGCTTACTGCCTTCCCCCCTTGTACCTACAGT GATGCCTAGGATGGTATTGACAGTTGTTTTCTAAACTTCCTGCTGAGCAACAGTCCTTCAAATATAGGTAGAGTGGTCTAGGTTAAGGAG GGAGGAGGGTTGATCTTTAATCAGGTTGGCTTTGGAGGAAGGAAAAACCACTAAGGTATTATCTGAATTTTAAGATGCTTCCCATCCTTA ATAACTAAAACCTGAATGCTTTTCTTTCTGAAAAATCTCCCTCTCTCCTTCCATGATTCTGAAGTTGGTTAAAAGTCGATATGTTGATGT GTATTATTTGGGGGAACAGAAAAGGACAAGGAAGGAAACAGAACGATGGGAAGGGTTTGTGAGCTAGAATAAGAGGTGCAGGATTTCACA AAACAAATTCCTCACAAATCATTGAAGCCCAGTTCACCATACAAATTACCCATGTCTTACTCTGTTCCTTGTATATATGCATTCTGGGTT TTTTTATTATTAAAGGGGAAGTTAGGGGGGAGGGTGAAGGTCAGTCTGAGGGGAAATCCAGGAAATGTGGTGCCCTTAGAAGGGGGCTGT CAGCTCTTTTCCATAGAGAGGGAAAGAAACTTTGAGAAAATGTTCTTGACCCATTGATTGTATCTGCTGGAAGAAGTCATCTGGGCCTGT TGGGTTGGTATCAGATCAGGGGATTATGCATCCAGCCCCTGGCCCCTTTAATCTATTTGCCTCTTTTTAAAAAAGGTTAAGTCTTCTTGG GTGAGGCTTGCCAGGGAAACTCCTAAGTGGCTTCACTTATTTTTTAAATTTTAATTTAATTTTTAAATTTTTGCTTGGAAGCAGCACTGG TAATAAATGTTTTATTTTTTGTTCATTTTCCCTAAAGGAAAAATGTCCTTAAGAGATTAAAGCTCTTAATTGATTACTGTCTGGTTACAA ACTGGCAAACTGACTAAAATGGGAAGCTGCCACCGTGCCTGACTCATGTAGCTGATGACCGAAGGCTCATCCTTTCTTTTCTATTTGACA GACATTTACTGAGCTTCAGACTTGAGCCAACCCTGAGCTGGACTGTGGAGATAAAGCAGTTCCTGCTCTTGAGGAGCTCAATGTCTAATG GAATGCATTTGAATGTATGTGTGGCTGGAGAGTTCATTTATGGTCTTAGGAAAGCCATTTCTGGTCCCATTTAGAAAACTGACCAGCACC CAGCAAGCTGCATTCTACATTTTAGAGACCCCATTGGTATTTGTGAATTTGATTGCACCACCGCTTTTCCTTTACTAAGTAATGTTATGG AAGGAGAATGAATTTTCTCCTCTAGTGATTACAGGACATTAACATCTCTTCAGAAGCTGCTTTTAGCTTAAGCCCCAAGAAGTGAGGTGG GTTGTGGATCACTGACATGGTCAGGGGAGGCCCACACCTCAATTCAGTAACCACCTAATCTCTCCCCCAACCTGATCTCTCATCAGAGCT GGCAGCAACTTGGGATTCCTTTCCTTTTTCCTGCCTAACTTTTCATTGAAATGTCTAGTAGGAGAGTGAGAAAAGAGAACAAAGGCTGGG TCACAGTCATAGAATGTTACAGCTGGAATGGGCATGGAAATCATCCAAGTTAAACTTCTTCTCTGCCCCCCGCCCCCACTTTTTTTTTTT TTTTTTTTTAACCAAACGAACTTGTGATCCAGTGCCCTATTTTATAGTGTGGTTTTCCAGGGTCTGAATAAATAATCATTAAAGTTTGAC ACACGCAGACACACGCACCAATGATGGGGATACCCCCAAATGATTTAGGAGGTTATTTTATTTTAATAGTTTTTTCTTCCTGATTTTTTT CAGTTAGTTAGAGTTAAATGTACCTATAGCCCCTGAATACATGCTCAGGTAGAGAAAGTCTCCATAGTATAAGTAAGTAATATGAATGTG GAATCTTGGAAAGTGATATATTTTGATTGGAATAATTTTAATTAAATTTAATGATTTTAATTAAGAATTAAAAGCCAGCTAGCCAAATTT TCTTTAAAAATTGGAAACTCATTATGGTCTTAAATTGTCCTCAGGCAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTA TCTAAACATACCTGGTTATGAATTCTCAAAAGAGAAAGCAGGTCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAAGA GATTTTCTTCTGAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTCTGAAGAAGATTGTAGAAAAGAGAC TAAGATATATGCAAGGGTCACCAGTTTAGAGATCAGTCAAATTGGAAAAAGTGCCAAGACTGGATGTGCAGATTGTTCTATGTATTATCA GTATTTTTTTCCTCTTAAGAAAAAAATTTACTCTCTCTCCTTTGTGAGTAAATGCCTCCTTAATGCCTTTTAAGTAAGGTGGCAACTTTT AACTGTCATCTTGTGAGAGGCAACCTCAAACTCTAAGCAGACTCCCTCTCTCCCTTTCTGGTGTCTTAAATCAAGAACTAGTTTGAAGCC AAGGCAAAGCAAGGTTTGTTCATCTTCCTTTCCTGTCATTTAAGGTAAAACAGGCAATGAACTCGCTCTTCAAATACCATAGTTCAAGAG TAGCTGTTGGCCCTGGTTCCAGATTAATATAGCAGCAGGCAGATTGCCCCTTCTTGGGGCCACCACCCTCCAAAGCTGTGCCACCAATGA GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCAGCAGAGCACTTAAAAGTCCTAGTGAGAGAATAGATA CTATGCAAGGGAAAAAAATTTAAATGCCAACGAATAGTTTTTTTTTTTTTGAACCTGATACACTGTTTGTTTACTCTCAACTCTTTGTAC AAATATTATTGTCCTAAGGGCCTTTTCCCCTCCTGCCTAGAAAATAGGTTGTGTATTGGTTTTATTCAACCTGCTGTCTGCTTTAGGATT GGAGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACT TGGACCAGGGCATGCCCTGTTGGGGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTA >In-frame_ENST00000408905_ENST00000299563_TCGA-BH-A18R-01A_BCAS3_chr17_58786686_+_RNF169_chr11_74521229_length(amino acids)=623AA_start in transcript=0_stop in transcript=1871 MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKIVWVRFENADLNDTSRNLEFHEIHSTGNEPP LLIMIGYSDGMQVWSIPLREEKLQEEKPSEDQIHKLLPEDTETGKRKMDEQKKRDEPLVLKTNLERCPARLSDSENEEPSRGQMTQTHRS AFVSKNNSYSLAFLAGKLNSKVERSQSCSDTAQERAKSRVRAVPGNKAKVTTMTPASNPIIGVLLSTQNNRCVSAPDLTIEKRLPFSSLS SLASLHKPERSVSPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQKQTSYEASPRILKKWEQIFQERQIKK TLSKATLTSLAPEMGEELLGSEGIHSSKEKPLVAVNTRLSGGQVLSEYTGPTSADLDHFPSVSQTKAEQDSDNKSSTEIPLETCCSSELK GGGSGTSLEREQFEGLGSTPDAKLDKTCISRAMKITTVNSVLPQNSVLGGVLKTKQQLKTLNHFDLTNGVLVESLSEEPLPSLRRGRKRH -------------------------------------------------------------- >In-frame_ENST00000588462_ENST00000299563_TCGA-BH-A18R-01A_BCAS3_chr17_58786686_+_RNF169_chr11_74521229_length(transcript)=7555nt_BP=321nt ATGAATGAAGCTATGGCTACAGATTCCCCAAGAAGACCCAGTCGTTGTACTGGTGGAGTTGTGGTTCGCCCCCAGGCTGTCACAGAGCAG TCCTACATGGAAAGTGTTGTGACTTTTCTGCAGGATGTTGTGCCACAGGCTTACAGTGGAACACCTCTAACAGAAGAAAAGGAGAAAATA GTCTGGGTCAGATTTGAAAATGCAGATTTAAATGATACATCAAGAAATCTGGAATTTCATGAAATACATAGTACTGGGAATGAACCGCCT TTGTTGATTATGATTGGCTACAGTGATGGAATGCAGGTCTGGAGCATCCCTCTGAGAGAAGAAAAGTTACAAGAGGAAAAACCCTCTGAA GATCAAATCCACAAGCTGTTACCAGAGGATACAGAAACAGGGAAAAGGAAAATGGATGAACAGAAAAAAAGAGATGAACCATTAGTACTG AAAACAAATCTGGAACGTTGTCCTGCACGTCTCTCAGATTCAGAGAATGAAGAACCTTCTCGAGGCCAGATGACACAGACACATCGCTCG GCATTTGTTTCCAAGAACAACTCCTACTCCTTAGCTTTCCTGGCAGGGAAGCTAAACTCCAAGGTGGAAAGGAGTCAGAGCTGTAGTGAC ACAGCCCAGGAAAGAGCGAAGAGCAGAGTCAGAGCAGTTCCAGGCAACAAAGCCAAGGTCACAACTATGACTCCAGCCTCCAACCCCATC ATTGGTGTCCTCTTGTCAACTCAAAACAACCGCTGCGTCTCGGCCCCTGACTTAACCATCGAAAAGCGTCTACCCTTCAGCTCCCTTTCA TCCTTGGCTTCCCTGCATAAGCCAGAGCGTTCTGTCAGCCCTGAGAGCAATGACAGCATCTCCGAAGAACTAAACCATTTCAAGCCCATT GTCTGCTCACCATGTACTCCTCCCAAGAGACTCCCTGATGGCCGTGTGCTAAGTCCTCTCATCATCAAATCAACTCCACGCAACCTAAAC AGAAGCCTGCAGAAGCAGACTTCTTATGAGGCCAGTCCACGGATCCTCAAAAAGTGGGAACAGATCTTTCAGGAGCGGCAGATCAAAAAG ACCCTTTCAAAAGCCACTCTTACCTCTCTGGCTCCTGAAATGGGGGAAGAGTTACTAGGCTCTGAAGGTATCCATTCTAGCAAGGAGAAG CCACTTGTGGCTGTAAATACAAGATTATCTGGTGGGCAGGTCCTCTCTGAGTATACTGGACCCACCTCTGCTGATCTTGATCATTTCCCC TCTGTTAGCCAAACAAAAGCAGAACAGGACAGTGATAATAAAAGTAGCACTGAGATCCCACTGGAAACCTGCTGTTCCTCAGAACTCAAA GGGGGAGGCAGTGGGACTTCTTTGGAGAGGGAGCAGTTTGAGGGGTTAGGGTCAACTCCAGATGCCAAGTTAGACAAAACCTGTATAAGC AGAGCCATGAAAATCACCACAGTTAATTCAGTGCTACCCCAAAACAGTGTTTTGGGTGGAGTCCTCAAAACAAAGCAACAATTGAAGACA TTAAATCATTTTGATCTGACTAATGGTGTTCTAGTTGAGAGCCTAAGTGAAGAGCCACTTCCTTCTTTGCGTCGAGGCCGGAAAAGACAC TGCAAGACCAAGCACTTAGAACAAAATGGCTCCCTTAAAAAACTGCGACAAACCAGTGGGGAGGTGGGTCTGGCCCCAACAGACCCAGTC CTGCGAGAGATGGAGCAGAAGCTTCAGCAAGAGGAAGAAGACCGACAGTTGGCTCTGCAGTTGCAGCGCATGTTCGACAATGAGAGGCGG ACTGTGAGCCGGCGAAAAGGAAGTGTGGATCAGTATCTCCTACGGTCCAGCAACATGGCCGGGGCCAAGTAGCACCTAATGAAGTGTTAC CTATTTTTAAAAGGTCTTAGGCCTTGATCATTTATCCTGAAGAGCTGAGTGTTCTCACTTTGGTTTTATTTTAATGGCAAAACACTGTCT AATATGGTTCTGAGAGGTTCCAGGGCCTTTGTAGTCAATATCCAAGGGAAAAGCATCTCCGTTTCTCTGTGACCCAGGCCAGAAGCCTGA GTGACCCATCCCTAAGGGCTTCTGGGCCAAACCTGGCAGCACCCACTGGGAATGAGATTTGGAACGGCCTCAGGAGCATAATGGCCACAG TTAGTAATGGTAAAGAGGGGATACCTTCTTAAACTGATAGACTTCCTGACTTCTTTCAGCAGGGTATTGTTTTAAATCAGCCTTGCAGAT AAAAATTAATTCCATCTTTTTCAGACAAGTGAACAATTTAGTTCCTTGGCAGATCCAAAATGATAGATGGTTATGTTACGCTTTCTGCTG TCCCTTGCCAAAAATAAGTAAATATATCAGTTAAGATTATGCCTTTACAAAAGTTAATTTACATTCTCTGTTTAAAAAATAATATTTGGT GAATGCTATATAGTTGACAGAGCACATTTACAGACCTTATTAATTTAGTCTTTCCAAGAGACCTCTCATGTAACTGGCATTAGCCCCATT TTTAGATGATGAAACTGCAGTGCAGATGTTCTGGTTCTCTCAACTACCAAGTGGCATAACCCATGGATTTTCTAAAGGTTTCCCAAATAG ATCACAACCTAAGGGTGTGCCAGGGGAGCCTAGGGGAAGCTAGGCTGGGCATTGAACACTGATAGTGCAGAATCCACATGCAAACAAGAT CGACAGGGTGGATAAACATATATGTGCATTATCCCCATCCCCCACAGTTTAGAGCCTTCTGCTTTTCTGGGGGTTTCAGCCTATGAGACA AACTATAATCAGGCTTCATTATTACTTTTCAAATGGCCAAGGGTTATCTGCAATGTTGATCTAAAATCCTAAAAAATCACCCTGAAGTCA GGCAAGGAACAATACTTAAACTCCATACTATGGAAACAAGGTATCTAGCTGGATGCAGCTGGTAAATTCAGTCCCATGGACCTTTGGGGG TTTATTTTCCTTAGCAGCTGACACCATGTGTCTTTTGCATCCCTGGTGGTGCTTGGTGCTTCTGCCCATCTGGGCTCATTGAGAATAGGG ATGAAGATATGATTTTAGGGAATTTCTGATGGGCTGGCATGCCCCATGTAGTATGAGTTACTATATAAAGTCATGTGACTGGCATTTTAA CAGACCTTCCAGAGCTTATATATCCCAATATATGTTGTTTCCTTTGAGTAGCCCCAGCAGGATACTGCTTAGTTTTTCCAGTGCCATTGG TGAAAGCATTTCTGGAACTGTCTTCAAAGACTAGAAACACTGACTCCCAAAATGCTAGAACTGGAAGGGACCTTAATGGTTATCTATTCC AGCCTCCTCCTAAGGTCCTCCTCAGCTTCTAGACCTAGAAGCCAAAGTCCAGAACAGTGACCCATTGATCAAGGCAGATAGTATAACTCC TTTTAAGTGTTCTCAGATTTGCCTTTTCTCAGGGCAAATCTTCAGTGTTTTGTGGTTATTTGTGGTTGAGAGAGAGAGAGAATGTAATGT CTGAGACTAGCCAGCAGCTATTTGAAGCCTCTGGGAAAGAAGGTGGCTTATCAAGTGGGTTTGTAGTAATGAGTGCTGCTGTAAAGCAGA GCCATTTTCTTGTGCAGCTCATAGTTCCCAAACAGTTCCCAAACAGAAATTCCAGAGATGTCTTAAACATTGTGGTCATCATTGAGATAG GTGGAATCTCTTTGGTGACTACGTTGGTGGGGAACATCACTCACCTGAATGTATGCATTCTGTGTTCTCTGTGTGTGTGCACATATGCAG ATGTATGTTTTAAAAACATTTACCAAACTCATGATTTTGTAGTCACACCACTTCAGTTCTGGGCCCTACCAACAATTTATGTCCTCCAAG AGCTGCTGGAGGGCATGTTTGTGCCCAAAACAGAAGAGCTGGCTCTGGTTTACAGAAGACAGGGAGGGTGACCTTACTATAAATGCCCTT AGAGGAAACTTATCAGTTACTGCCATTTCACGCATTTCCTTTTTGATCTTAGTAAATATTATTGGAAGGCTAGTCTTGTTGGTAGGAGCA AAGACACTTATTTTTCCACTTGCCATCTTTCTCTATATCTCCAGTAATTTGAAAAACACTTTTCAGTTGGAATTGATTTTTGTCTTTGGT AAAAAGAAATATTTTTAATAGATAAAAGATATATATTTTAAATATTTCCCCAAATTAATACTTTCATTTTAAGAATTGCATAGCAGTTGT AACAAGTGCAGAATGAAGAACAAATTCTTGTTAAGCAAATAGTCCAAACTCTAGGTCCAGCTTACTGCCTTCCCCCCTTGTACCTACAGT GATGCCTAGGATGGTATTGACAGTTGTTTTCTAAACTTCCTGCTGAGCAACAGTCCTTCAAATATAGGTAGAGTGGTCTAGGTTAAGGAG GGAGGAGGGTTGATCTTTAATCAGGTTGGCTTTGGAGGAAGGAAAAACCACTAAGGTATTATCTGAATTTTAAGATGCTTCCCATCCTTA ATAACTAAAACCTGAATGCTTTTCTTTCTGAAAAATCTCCCTCTCTCCTTCCATGATTCTGAAGTTGGTTAAAAGTCGATATGTTGATGT GTATTATTTGGGGGAACAGAAAAGGACAAGGAAGGAAACAGAACGATGGGAAGGGTTTGTGAGCTAGAATAAGAGGTGCAGGATTTCACA AAACAAATTCCTCACAAATCATTGAAGCCCAGTTCACCATACAAATTACCCATGTCTTACTCTGTTCCTTGTATATATGCATTCTGGGTT TTTTTATTATTAAAGGGGAAGTTAGGGGGGAGGGTGAAGGTCAGTCTGAGGGGAAATCCAGGAAATGTGGTGCCCTTAGAAGGGGGCTGT CAGCTCTTTTCCATAGAGAGGGAAAGAAACTTTGAGAAAATGTTCTTGACCCATTGATTGTATCTGCTGGAAGAAGTCATCTGGGCCTGT TGGGTTGGTATCAGATCAGGGGATTATGCATCCAGCCCCTGGCCCCTTTAATCTATTTGCCTCTTTTTAAAAAAGGTTAAGTCTTCTTGG GTGAGGCTTGCCAGGGAAACTCCTAAGTGGCTTCACTTATTTTTTAAATTTTAATTTAATTTTTAAATTTTTGCTTGGAAGCAGCACTGG TAATAAATGTTTTATTTTTTGTTCATTTTCCCTAAAGGAAAAATGTCCTTAAGAGATTAAAGCTCTTAATTGATTACTGTCTGGTTACAA ACTGGCAAACTGACTAAAATGGGAAGCTGCCACCGTGCCTGACTCATGTAGCTGATGACCGAAGGCTCATCCTTTCTTTTCTATTTGACA GACATTTACTGAGCTTCAGACTTGAGCCAACCCTGAGCTGGACTGTGGAGATAAAGCAGTTCCTGCTCTTGAGGAGCTCAATGTCTAATG GAATGCATTTGAATGTATGTGTGGCTGGAGAGTTCATTTATGGTCTTAGGAAAGCCATTTCTGGTCCCATTTAGAAAACTGACCAGCACC CAGCAAGCTGCATTCTACATTTTAGAGACCCCATTGGTATTTGTGAATTTGATTGCACCACCGCTTTTCCTTTACTAAGTAATGTTATGG AAGGAGAATGAATTTTCTCCTCTAGTGATTACAGGACATTAACATCTCTTCAGAAGCTGCTTTTAGCTTAAGCCCCAAGAAGTGAGGTGG GTTGTGGATCACTGACATGGTCAGGGGAGGCCCACACCTCAATTCAGTAACCACCTAATCTCTCCCCCAACCTGATCTCTCATCAGAGCT GGCAGCAACTTGGGATTCCTTTCCTTTTTCCTGCCTAACTTTTCATTGAAATGTCTAGTAGGAGAGTGAGAAAAGAGAACAAAGGCTGGG TCACAGTCATAGAATGTTACAGCTGGAATGGGCATGGAAATCATCCAAGTTAAACTTCTTCTCTGCCCCCCGCCCCCACTTTTTTTTTTT TTTTTTTTTAACCAAACGAACTTGTGATCCAGTGCCCTATTTTATAGTGTGGTTTTCCAGGGTCTGAATAAATAATCATTAAAGTTTGAC ACACGCAGACACACGCACCAATGATGGGGATACCCCCAAATGATTTAGGAGGTTATTTTATTTTAATAGTTTTTTCTTCCTGATTTTTTT CAGTTAGTTAGAGTTAAATGTACCTATAGCCCCTGAATACATGCTCAGGTAGAGAAAGTCTCCATAGTATAAGTAAGTAATATGAATGTG GAATCTTGGAAAGTGATATATTTTGATTGGAATAATTTTAATTAAATTTAATGATTTTAATTAAGAATTAAAAGCCAGCTAGCCAAATTT TCTTTAAAAATTGGAAACTCATTATGGTCTTAAATTGTCCTCAGGCAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTA TCTAAACATACCTGGTTATGAATTCTCAAAAGAGAAAGCAGGTCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAAGA GATTTTCTTCTGAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTCTGAAGAAGATTGTAGAAAAGAGAC TAAGATATATGCAAGGGTCACCAGTTTAGAGATCAGTCAAATTGGAAAAAGTGCCAAGACTGGATGTGCAGATTGTTCTATGTATTATCA GTATTTTTTTCCTCTTAAGAAAAAAATTTACTCTCTCTCCTTTGTGAGTAAATGCCTCCTTAATGCCTTTTAAGTAAGGTGGCAACTTTT AACTGTCATCTTGTGAGAGGCAACCTCAAACTCTAAGCAGACTCCCTCTCTCCCTTTCTGGTGTCTTAAATCAAGAACTAGTTTGAAGCC AAGGCAAAGCAAGGTTTGTTCATCTTCCTTTCCTGTCATTTAAGGTAAAACAGGCAATGAACTCGCTCTTCAAATACCATAGTTCAAGAG TAGCTGTTGGCCCTGGTTCCAGATTAATATAGCAGCAGGCAGATTGCCCCTTCTTGGGGCCACCACCCTCCAAAGCTGTGCCACCAATGA GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCAGCAGAGCACTTAAAAGTCCTAGTGAGAGAATAGATA CTATGCAAGGGAAAAAAATTTAAATGCCAACGAATAGTTTTTTTTTTTTTGAACCTGATACACTGTTTGTTTACTCTCAACTCTTTGTAC AAATATTATTGTCCTAAGGGCCTTTTCCCCTCCTGCCTAGAAAATAGGTTGTGTATTGGTTTTATTCAACCTGCTGTCTGCTTTAGGATT GGAGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACT TGGACCAGGGCATGCCCTGTTGGGGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTA >In-frame_ENST00000588462_ENST00000299563_TCGA-BH-A18R-01A_BCAS3_chr17_58786686_+_RNF169_chr11_74521229_length(amino acids)=623AA_start in transcript=0_stop in transcript=1871 MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKIVWVRFENADLNDTSRNLEFHEIHSTGNEPP LLIMIGYSDGMQVWSIPLREEKLQEEKPSEDQIHKLLPEDTETGKRKMDEQKKRDEPLVLKTNLERCPARLSDSENEEPSRGQMTQTHRS AFVSKNNSYSLAFLAGKLNSKVERSQSCSDTAQERAKSRVRAVPGNKAKVTTMTPASNPIIGVLLSTQNNRCVSAPDLTIEKRLPFSSLS SLASLHKPERSVSPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQKQTSYEASPRILKKWEQIFQERQIKK TLSKATLTSLAPEMGEELLGSEGIHSSKEKPLVAVNTRLSGGQVLSEYTGPTSADLDHFPSVSQTKAEQDSDNKSSTEIPLETCCSSELK GGGSGTSLEREQFEGLGSTPDAKLDKTCISRAMKITTVNSVLPQNSVLGGVLKTKQQLKTLNHFDLTNGVLVESLSEEPLPSLRRGRKRH -------------------------------------------------------------- >In-frame_ENST00000589222_ENST00000299563_TCGA-BH-A18R_BCAS3_chr17_58786686_+_RNF169_chr11_74521228_length(transcript)=7623nt_BP=389nt CTCGGGGAGACTCCAAACAGTGAGCCTAGAGCTGGAGACTAGCGTTAACCGGCGGGGCGGCCGGTTTTATGAATGAAGCTATGGCTACAG ATTCCCCAAGAAGACCCAGTCGTTGTACTGGTGGAGTTGTGGTTCGCCCCCAGGCTGTCACAGAGCAGTCCTACATGGAAAGTGTTGTGA CTTTTCTGCAGGATGTTGTGCCACAGGCTTACAGTGGAACACCTCTAACAGAAGAAAAGGAGAAAATAGTCTGGGTCAGATTTGAAAATG CAGATTTAAATGATACATCAAGAAATCTGGAATTTCATGAAATACATAGTACTGGGAATGAACCGCCTTTGTTGATTATGATTGGCTACA GTGATGGAATGCAGGTCTGGAGCATCCCTCTGAGAGAAGAAAAGTTACAAGAGGAAAAACCCTCTGAAGATCAAATCCACAAGCTGTTAC CAGAGGATACAGAAACAGGGAAAAGGAAAATGGATGAACAGAAAAAAAGAGATGAACCATTAGTACTGAAAACAAATCTGGAACGTTGTC CTGCACGTCTCTCAGATTCAGAGAATGAAGAACCTTCTCGAGGCCAGATGACACAGACACATCGCTCGGCATTTGTTTCCAAGAACAACT CCTACTCCTTAGCTTTCCTGGCAGGGAAGCTAAACTCCAAGGTGGAAAGGAGTCAGAGCTGTAGTGACACAGCCCAGGAAAGAGCGAAGA GCAGAGTCAGAGCAGTTCCAGGCAACAAAGCCAAGGTCACAACTATGACTCCAGCCTCCAACCCCATCATTGGTGTCCTCTTGTCAACTC AAAACAACCGCTGCGTCTCGGCCCCTGACTTAACCATCGAAAAGCGTCTACCCTTCAGCTCCCTTTCATCCTTGGCTTCCCTGCATAAGC CAGAGCGTTCTGTCAGCCCTGAGAGCAATGACAGCATCTCCGAAGAACTAAACCATTTCAAGCCCATTGTCTGCTCACCATGTACTCCTC CCAAGAGACTCCCTGATGGCCGTGTGCTAAGTCCTCTCATCATCAAATCAACTCCACGCAACCTAAACAGAAGCCTGCAGAAGCAGACTT CTTATGAGGCCAGTCCACGGATCCTCAAAAAGTGGGAACAGATCTTTCAGGAGCGGCAGATCAAAAAGACCCTTTCAAAAGCCACTCTTA CCTCTCTGGCTCCTGAAATGGGGGAAGAGTTACTAGGCTCTGAAGGTATCCATTCTAGCAAGGAGAAGCCACTTGTGGCTGTAAATACAA GATTATCTGGTGGGCAGGTCCTCTCTGAGTATACTGGACCCACCTCTGCTGATCTTGATCATTTCCCCTCTGTTAGCCAAACAAAAGCAG AACAGGACAGTGATAATAAAAGTAGCACTGAGATCCCACTGGAAACCTGCTGTTCCTCAGAACTCAAAGGGGGAGGCAGTGGGACTTCTT TGGAGAGGGAGCAGTTTGAGGGGTTAGGGTCAACTCCAGATGCCAAGTTAGACAAAACCTGTATAAGCAGAGCCATGAAAATCACCACAG TTAATTCAGTGCTACCCCAAAACAGTGTTTTGGGTGGAGTCCTCAAAACAAAGCAACAATTGAAGACATTAAATCATTTTGATCTGACTA ATGGTGTTCTAGTTGAGAGCCTAAGTGAAGAGCCACTTCCTTCTTTGCGTCGAGGCCGGAAAAGACACTGCAAGACCAAGCACTTAGAAC AAAATGGCTCCCTTAAAAAACTGCGACAAACCAGTGGGGAGGTGGGTCTGGCCCCAACAGACCCAGTCCTGCGAGAGATGGAGCAGAAGC TTCAGCAAGAGGAAGAAGACCGACAGTTGGCTCTGCAGTTGCAGCGCATGTTCGACAATGAGAGGCGGACTGTGAGCCGGCGAAAAGGAA GTGTGGATCAGTATCTCCTACGGTCCAGCAACATGGCCGGGGCCAAGTAGCACCTAATGAAGTGTTACCTATTTTTAAAAGGTCTTAGGC CTTGATCATTTATCCTGAAGAGCTGAGTGTTCTCACTTTGGTTTTATTTTAATGGCAAAACACTGTCTAATATGGTTCTGAGAGGTTCCA GGGCCTTTGTAGTCAATATCCAAGGGAAAAGCATCTCCGTTTCTCTGTGACCCAGGCCAGAAGCCTGAGTGACCCATCCCTAAGGGCTTC TGGGCCAAACCTGGCAGCACCCACTGGGAATGAGATTTGGAACGGCCTCAGGAGCATAATGGCCACAGTTAGTAATGGTAAAGAGGGGAT ACCTTCTTAAACTGATAGACTTCCTGACTTCTTTCAGCAGGGTATTGTTTTAAATCAGCCTTGCAGATAAAAATTAATTCCATCTTTTTC AGACAAGTGAACAATTTAGTTCCTTGGCAGATCCAAAATGATAGATGGTTATGTTACGCTTTCTGCTGTCCCTTGCCAAAAATAAGTAAA TATATCAGTTAAGATTATGCCTTTACAAAAGTTAATTTACATTCTCTGTTTAAAAAATAATATTTGGTGAATGCTATATAGTTGACAGAG CACATTTACAGACCTTATTAATTTAGTCTTTCCAAGAGACCTCTCATGTAACTGGCATTAGCCCCATTTTTAGATGATGAAACTGCAGTG CAGATGTTCTGGTTCTCTCAACTACCAAGTGGCATAACCCATGGATTTTCTAAAGGTTTCCCAAATAGATCACAACCTAAGGGTGTGCCA GGGGAGCCTAGGGGAAGCTAGGCTGGGCATTGAACACTGATAGTGCAGAATCCACATGCAAACAAGATCGACAGGGTGGATAAACATATA TGTGCATTATCCCCATCCCCCACAGTTTAGAGCCTTCTGCTTTTCTGGGGGTTTCAGCCTATGAGACAAACTATAATCAGGCTTCATTAT TACTTTTCAAATGGCCAAGGGTTATCTGCAATGTTGATCTAAAATCCTAAAAAATCACCCTGAAGTCAGGCAAGGAACAATACTTAAACT CCATACTATGGAAACAAGGTATCTAGCTGGATGCAGCTGGTAAATTCAGTCCCATGGACCTTTGGGGGTTTATTTTCCTTAGCAGCTGAC ACCATGTGTCTTTTGCATCCCTGGTGGTGCTTGGTGCTTCTGCCCATCTGGGCTCATTGAGAATAGGGATGAAGATATGATTTTAGGGAA TTTCTGATGGGCTGGCATGCCCCATGTAGTATGAGTTACTATATAAAGTCATGTGACTGGCATTTTAACAGACCTTCCAGAGCTTATATA TCCCAATATATGTTGTTTCCTTTGAGTAGCCCCAGCAGGATACTGCTTAGTTTTTCCAGTGCCATTGGTGAAAGCATTTCTGGAACTGTC TTCAAAGACTAGAAACACTGACTCCCAAAATGCTAGAACTGGAAGGGACCTTAATGGTTATCTATTCCAGCCTCCTCCTAAGGTCCTCCT CAGCTTCTAGACCTAGAAGCCAAAGTCCAGAACAGTGACCCATTGATCAAGGCAGATAGTATAACTCCTTTTAAGTGTTCTCAGATTTGC CTTTTCTCAGGGCAAATCTTCAGTGTTTTGTGGTTATTTGTGGTTGAGAGAGAGAGAGAATGTAATGTCTGAGACTAGCCAGCAGCTATT TGAAGCCTCTGGGAAAGAAGGTGGCTTATCAAGTGGGTTTGTAGTAATGAGTGCTGCTGTAAAGCAGAGCCATTTTCTTGTGCAGCTCAT AGTTCCCAAACAGTTCCCAAACAGAAATTCCAGAGATGTCTTAAACATTGTGGTCATCATTGAGATAGGTGGAATCTCTTTGGTGACTAC GTTGGTGGGGAACATCACTCACCTGAATGTATGCATTCTGTGTTCTCTGTGTGTGTGCACATATGCAGATGTATGTTTTAAAAACATTTA CCAAACTCATGATTTTGTAGTCACACCACTTCAGTTCTGGGCCCTACCAACAATTTATGTCCTCCAAGAGCTGCTGGAGGGCATGTTTGT GCCCAAAACAGAAGAGCTGGCTCTGGTTTACAGAAGACAGGGAGGGTGACCTTACTATAAATGCCCTTAGAGGAAACTTATCAGTTACTG CCATTTCACGCATTTCCTTTTTGATCTTAGTAAATATTATTGGAAGGCTAGTCTTGTTGGTAGGAGCAAAGACACTTATTTTTCCACTTG CCATCTTTCTCTATATCTCCAGTAATTTGAAAAACACTTTTCAGTTGGAATTGATTTTTGTCTTTGGTAAAAAGAAATATTTTTAATAGA TAAAAGATATATATTTTAAATATTTCCCCAAATTAATACTTTCATTTTAAGAATTGCATAGCAGTTGTAACAAGTGCAGAATGAAGAACA AATTCTTGTTAAGCAAATAGTCCAAACTCTAGGTCCAGCTTACTGCCTTCCCCCCTTGTACCTACAGTGATGCCTAGGATGGTATTGACA GTTGTTTTCTAAACTTCCTGCTGAGCAACAGTCCTTCAAATATAGGTAGAGTGGTCTAGGTTAAGGAGGGAGGAGGGTTGATCTTTAATC AGGTTGGCTTTGGAGGAAGGAAAAACCACTAAGGTATTATCTGAATTTTAAGATGCTTCCCATCCTTAATAACTAAAACCTGAATGCTTT TCTTTCTGAAAAATCTCCCTCTCTCCTTCCATGATTCTGAAGTTGGTTAAAAGTCGATATGTTGATGTGTATTATTTGGGGGAACAGAAA AGGACAAGGAAGGAAACAGAACGATGGGAAGGGTTTGTGAGCTAGAATAAGAGGTGCAGGATTTCACAAAACAAATTCCTCACAAATCAT TGAAGCCCAGTTCACCATACAAATTACCCATGTCTTACTCTGTTCCTTGTATATATGCATTCTGGGTTTTTTTATTATTAAAGGGGAAGT TAGGGGGGAGGGTGAAGGTCAGTCTGAGGGGAAATCCAGGAAATGTGGTGCCCTTAGAAGGGGGCTGTCAGCTCTTTTCCATAGAGAGGG AAAGAAACTTTGAGAAAATGTTCTTGACCCATTGATTGTATCTGCTGGAAGAAGTCATCTGGGCCTGTTGGGTTGGTATCAGATCAGGGG ATTATGCATCCAGCCCCTGGCCCCTTTAATCTATTTGCCTCTTTTTAAAAAAGGTTAAGTCTTCTTGGGTGAGGCTTGCCAGGGAAACTC CTAAGTGGCTTCACTTATTTTTTAAATTTTAATTTAATTTTTAAATTTTTGCTTGGAAGCAGCACTGGTAATAAATGTTTTATTTTTTGT TCATTTTCCCTAAAGGAAAAATGTCCTTAAGAGATTAAAGCTCTTAATTGATTACTGTCTGGTTACAAACTGGCAAACTGACTAAAATGG GAAGCTGCCACCGTGCCTGACTCATGTAGCTGATGACCGAAGGCTCATCCTTTCTTTTCTATTTGACAGACATTTACTGAGCTTCAGACT TGAGCCAACCCTGAGCTGGACTGTGGAGATAAAGCAGTTCCTGCTCTTGAGGAGCTCAATGTCTAATGGAATGCATTTGAATGTATGTGT GGCTGGAGAGTTCATTTATGGTCTTAGGAAAGCCATTTCTGGTCCCATTTAGAAAACTGACCAGCACCCAGCAAGCTGCATTCTACATTT TAGAGACCCCATTGGTATTTGTGAATTTGATTGCACCACCGCTTTTCCTTTACTAAGTAATGTTATGGAAGGAGAATGAATTTTCTCCTC TAGTGATTACAGGACATTAACATCTCTTCAGAAGCTGCTTTTAGCTTAAGCCCCAAGAAGTGAGGTGGGTTGTGGATCACTGACATGGTC AGGGGAGGCCCACACCTCAATTCAGTAACCACCTAATCTCTCCCCCAACCTGATCTCTCATCAGAGCTGGCAGCAACTTGGGATTCCTTT CCTTTTTCCTGCCTAACTTTTCATTGAAATGTCTAGTAGGAGAGTGAGAAAAGAGAACAAAGGCTGGGTCACAGTCATAGAATGTTACAG CTGGAATGGGCATGGAAATCATCCAAGTTAAACTTCTTCTCTGCCCCCCGCCCCCACTTTTTTTTTTTTTTTTTTTTAACCAAACGAACT TGTGATCCAGTGCCCTATTTTATAGTGTGGTTTTCCAGGGTCTGAATAAATAATCATTAAAGTTTGACACACGCAGACACACGCACCAAT GATGGGGATACCCCCAAATGATTTAGGAGGTTATTTTATTTTAATAGTTTTTTCTTCCTGATTTTTTTCAGTTAGTTAGAGTTAAATGTA CCTATAGCCCCTGAATACATGCTCAGGTAGAGAAAGTCTCCATAGTATAAGTAAGTAATATGAATGTGGAATCTTGGAAAGTGATATATT TTGATTGGAATAATTTTAATTAAATTTAATGATTTTAATTAAGAATTAAAAGCCAGCTAGCCAAATTTTCTTTAAAAATTGGAAACTCAT TATGGTCTTAAATTGTCCTCAGGCAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATACCTGGTTATGAA TTCTCAAAAGAGAAAGCAGGTCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAAGAGATTTTCTTCTGAAGATGATCT AGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTCTGAAGAAGATTGTAGAAAAGAGACTAAGATATATGCAAGGGTCACC AGTTTAGAGATCAGTCAAATTGGAAAAAGTGCCAAGACTGGATGTGCAGATTGTTCTATGTATTATCAGTATTTTTTTCCTCTTAAGAAA AAAATTTACTCTCTCTCCTTTGTGAGTAAATGCCTCCTTAATGCCTTTTAAGTAAGGTGGCAACTTTTAACTGTCATCTTGTGAGAGGCA ACCTCAAACTCTAAGCAGACTCCCTCTCTCCCTTTCTGGTGTCTTAAATCAAGAACTAGTTTGAAGCCAAGGCAAAGCAAGGTTTGTTCA TCTTCCTTTCCTGTCATTTAAGGTAAAACAGGCAATGAACTCGCTCTTCAAATACCATAGTTCAAGAGTAGCTGTTGGCCCTGGTTCCAG ATTAATATAGCAGCAGGCAGATTGCCCCTTCTTGGGGCCACCACCCTCCAAAGCTGTGCCACCAATGAGAGCATTGGGTTCAAGTTTGCA TCAAACATGGTATTACCAACGCTGAGCCTCCAGCAGAGCACTTAAAAGTCCTAGTGAGAGAATAGATACTATGCAAGGGAAAAAAATTTA AATGCCAACGAATAGTTTTTTTTTTTTTGAACCTGATACACTGTTTGTTTACTCTCAACTCTTTGTACAAATATTATTGTCCTAAGGGCC TTTTCCCCTCCTGCCTAGAAAATAGGTTGTGTATTGGTTTTATTCAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTG TGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACTTGGACCAGGGCATGCCCTGTTG GGGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACCAAAGTGCATTCTTCAATGTA >In-frame_ENST00000589222_ENST00000299563_TCGA-BH-A18R_BCAS3_chr17_58786686_+_RNF169_chr11_74521228_length(amino acids)=623AA_start in transcript=68_stop in transcript=1939 MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKIVWVRFENADLNDTSRNLEFHEIHSTGNEPP LLIMIGYSDGMQVWSIPLREEKLQEEKPSEDQIHKLLPEDTETGKRKMDEQKKRDEPLVLKTNLERCPARLSDSENEEPSRGQMTQTHRS AFVSKNNSYSLAFLAGKLNSKVERSQSCSDTAQERAKSRVRAVPGNKAKVTTMTPASNPIIGVLLSTQNNRCVSAPDLTIEKRLPFSSLS SLASLHKPERSVSPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQKQTSYEASPRILKKWEQIFQERQIKK TLSKATLTSLAPEMGEELLGSEGIHSSKEKPLVAVNTRLSGGQVLSEYTGPTSADLDHFPSVSQTKAEQDSDNKSSTEIPLETCCSSELK GGGSGTSLEREQFEGLGSTPDAKLDKTCISRAMKITTVNSVLPQNSVLGGVLKTKQQLKTLNHFDLTNGVLVESLSEEPLPSLRRGRKRH -------------------------------------------------------------- >In-frame_ENST00000407086_ENST00000299563_TCGA-BH-A18R_BCAS3_chr17_58786686_+_RNF169_chr11_74521228_length(transcript)=7603nt_BP=369nt TGAGCCTAGAGCTGGAGACTAGCGTTAACCGGCGGGGCGGCCGGTTTTATGAATGAAGCTATGGCTACAGATTCCCCAAGAAGACCCAGT CGTTGTACTGGTGGAGTTGTGGTTCGCCCCCAGGCTGTCACAGAGCAGTCCTACATGGAAAGTGTTGTGACTTTTCTGCAGGATGTTGTG CCACAGGCTTACAGTGGAACACCTCTAACAGAAGAAAAGGAGAAAATAGTCTGGGTCAGATTTGAAAATGCAGATTTAAATGATACATCA AGAAATCTGGAATTTCATGAAATACATAGTACTGGGAATGAACCGCCTTTGTTGATTATGATTGGCTACAGTGATGGAATGCAGGTCTGG AGCATCCCTCTGAGAGAAGAAAAGTTACAAGAGGAAAAACCCTCTGAAGATCAAATCCACAAGCTGTTACCAGAGGATACAGAAACAGGG AAAAGGAAAATGGATGAACAGAAAAAAAGAGATGAACCATTAGTACTGAAAACAAATCTGGAACGTTGTCCTGCACGTCTCTCAGATTCA GAGAATGAAGAACCTTCTCGAGGCCAGATGACACAGACACATCGCTCGGCATTTGTTTCCAAGAACAACTCCTACTCCTTAGCTTTCCTG GCAGGGAAGCTAAACTCCAAGGTGGAAAGGAGTCAGAGCTGTAGTGACACAGCCCAGGAAAGAGCGAAGAGCAGAGTCAGAGCAGTTCCA GGCAACAAAGCCAAGGTCACAACTATGACTCCAGCCTCCAACCCCATCATTGGTGTCCTCTTGTCAACTCAAAACAACCGCTGCGTCTCG GCCCCTGACTTAACCATCGAAAAGCGTCTACCCTTCAGCTCCCTTTCATCCTTGGCTTCCCTGCATAAGCCAGAGCGTTCTGTCAGCCCT GAGAGCAATGACAGCATCTCCGAAGAACTAAACCATTTCAAGCCCATTGTCTGCTCACCATGTACTCCTCCCAAGAGACTCCCTGATGGC CGTGTGCTAAGTCCTCTCATCATCAAATCAACTCCACGCAACCTAAACAGAAGCCTGCAGAAGCAGACTTCTTATGAGGCCAGTCCACGG ATCCTCAAAAAGTGGGAACAGATCTTTCAGGAGCGGCAGATCAAAAAGACCCTTTCAAAAGCCACTCTTACCTCTCTGGCTCCTGAAATG GGGGAAGAGTTACTAGGCTCTGAAGGTATCCATTCTAGCAAGGAGAAGCCACTTGTGGCTGTAAATACAAGATTATCTGGTGGGCAGGTC CTCTCTGAGTATACTGGACCCACCTCTGCTGATCTTGATCATTTCCCCTCTGTTAGCCAAACAAAAGCAGAACAGGACAGTGATAATAAA AGTAGCACTGAGATCCCACTGGAAACCTGCTGTTCCTCAGAACTCAAAGGGGGAGGCAGTGGGACTTCTTTGGAGAGGGAGCAGTTTGAG GGGTTAGGGTCAACTCCAGATGCCAAGTTAGACAAAACCTGTATAAGCAGAGCCATGAAAATCACCACAGTTAATTCAGTGCTACCCCAA AACAGTGTTTTGGGTGGAGTCCTCAAAACAAAGCAACAATTGAAGACATTAAATCATTTTGATCTGACTAATGGTGTTCTAGTTGAGAGC CTAAGTGAAGAGCCACTTCCTTCTTTGCGTCGAGGCCGGAAAAGACACTGCAAGACCAAGCACTTAGAACAAAATGGCTCCCTTAAAAAA CTGCGACAAACCAGTGGGGAGGTGGGTCTGGCCCCAACAGACCCAGTCCTGCGAGAGATGGAGCAGAAGCTTCAGCAAGAGGAAGAAGAC CGACAGTTGGCTCTGCAGTTGCAGCGCATGTTCGACAATGAGAGGCGGACTGTGAGCCGGCGAAAAGGAAGTGTGGATCAGTATCTCCTA CGGTCCAGCAACATGGCCGGGGCCAAGTAGCACCTAATGAAGTGTTACCTATTTTTAAAAGGTCTTAGGCCTTGATCATTTATCCTGAAG AGCTGAGTGTTCTCACTTTGGTTTTATTTTAATGGCAAAACACTGTCTAATATGGTTCTGAGAGGTTCCAGGGCCTTTGTAGTCAATATC CAAGGGAAAAGCATCTCCGTTTCTCTGTGACCCAGGCCAGAAGCCTGAGTGACCCATCCCTAAGGGCTTCTGGGCCAAACCTGGCAGCAC CCACTGGGAATGAGATTTGGAACGGCCTCAGGAGCATAATGGCCACAGTTAGTAATGGTAAAGAGGGGATACCTTCTTAAACTGATAGAC TTCCTGACTTCTTTCAGCAGGGTATTGTTTTAAATCAGCCTTGCAGATAAAAATTAATTCCATCTTTTTCAGACAAGTGAACAATTTAGT TCCTTGGCAGATCCAAAATGATAGATGGTTATGTTACGCTTTCTGCTGTCCCTTGCCAAAAATAAGTAAATATATCAGTTAAGATTATGC CTTTACAAAAGTTAATTTACATTCTCTGTTTAAAAAATAATATTTGGTGAATGCTATATAGTTGACAGAGCACATTTACAGACCTTATTA ATTTAGTCTTTCCAAGAGACCTCTCATGTAACTGGCATTAGCCCCATTTTTAGATGATGAAACTGCAGTGCAGATGTTCTGGTTCTCTCA ACTACCAAGTGGCATAACCCATGGATTTTCTAAAGGTTTCCCAAATAGATCACAACCTAAGGGTGTGCCAGGGGAGCCTAGGGGAAGCTA GGCTGGGCATTGAACACTGATAGTGCAGAATCCACATGCAAACAAGATCGACAGGGTGGATAAACATATATGTGCATTATCCCCATCCCC CACAGTTTAGAGCCTTCTGCTTTTCTGGGGGTTTCAGCCTATGAGACAAACTATAATCAGGCTTCATTATTACTTTTCAAATGGCCAAGG GTTATCTGCAATGTTGATCTAAAATCCTAAAAAATCACCCTGAAGTCAGGCAAGGAACAATACTTAAACTCCATACTATGGAAACAAGGT ATCTAGCTGGATGCAGCTGGTAAATTCAGTCCCATGGACCTTTGGGGGTTTATTTTCCTTAGCAGCTGACACCATGTGTCTTTTGCATCC CTGGTGGTGCTTGGTGCTTCTGCCCATCTGGGCTCATTGAGAATAGGGATGAAGATATGATTTTAGGGAATTTCTGATGGGCTGGCATGC CCCATGTAGTATGAGTTACTATATAAAGTCATGTGACTGGCATTTTAACAGACCTTCCAGAGCTTATATATCCCAATATATGTTGTTTCC TTTGAGTAGCCCCAGCAGGATACTGCTTAGTTTTTCCAGTGCCATTGGTGAAAGCATTTCTGGAACTGTCTTCAAAGACTAGAAACACTG ACTCCCAAAATGCTAGAACTGGAAGGGACCTTAATGGTTATCTATTCCAGCCTCCTCCTAAGGTCCTCCTCAGCTTCTAGACCTAGAAGC CAAAGTCCAGAACAGTGACCCATTGATCAAGGCAGATAGTATAACTCCTTTTAAGTGTTCTCAGATTTGCCTTTTCTCAGGGCAAATCTT CAGTGTTTTGTGGTTATTTGTGGTTGAGAGAGAGAGAGAATGTAATGTCTGAGACTAGCCAGCAGCTATTTGAAGCCTCTGGGAAAGAAG GTGGCTTATCAAGTGGGTTTGTAGTAATGAGTGCTGCTGTAAAGCAGAGCCATTTTCTTGTGCAGCTCATAGTTCCCAAACAGTTCCCAA ACAGAAATTCCAGAGATGTCTTAAACATTGTGGTCATCATTGAGATAGGTGGAATCTCTTTGGTGACTACGTTGGTGGGGAACATCACTC ACCTGAATGTATGCATTCTGTGTTCTCTGTGTGTGTGCACATATGCAGATGTATGTTTTAAAAACATTTACCAAACTCATGATTTTGTAG TCACACCACTTCAGTTCTGGGCCCTACCAACAATTTATGTCCTCCAAGAGCTGCTGGAGGGCATGTTTGTGCCCAAAACAGAAGAGCTGG CTCTGGTTTACAGAAGACAGGGAGGGTGACCTTACTATAAATGCCCTTAGAGGAAACTTATCAGTTACTGCCATTTCACGCATTTCCTTT TTGATCTTAGTAAATATTATTGGAAGGCTAGTCTTGTTGGTAGGAGCAAAGACACTTATTTTTCCACTTGCCATCTTTCTCTATATCTCC AGTAATTTGAAAAACACTTTTCAGTTGGAATTGATTTTTGTCTTTGGTAAAAAGAAATATTTTTAATAGATAAAAGATATATATTTTAAA TATTTCCCCAAATTAATACTTTCATTTTAAGAATTGCATAGCAGTTGTAACAAGTGCAGAATGAAGAACAAATTCTTGTTAAGCAAATAG TCCAAACTCTAGGTCCAGCTTACTGCCTTCCCCCCTTGTACCTACAGTGATGCCTAGGATGGTATTGACAGTTGTTTTCTAAACTTCCTG CTGAGCAACAGTCCTTCAAATATAGGTAGAGTGGTCTAGGTTAAGGAGGGAGGAGGGTTGATCTTTAATCAGGTTGGCTTTGGAGGAAGG AAAAACCACTAAGGTATTATCTGAATTTTAAGATGCTTCCCATCCTTAATAACTAAAACCTGAATGCTTTTCTTTCTGAAAAATCTCCCT CTCTCCTTCCATGATTCTGAAGTTGGTTAAAAGTCGATATGTTGATGTGTATTATTTGGGGGAACAGAAAAGGACAAGGAAGGAAACAGA ACGATGGGAAGGGTTTGTGAGCTAGAATAAGAGGTGCAGGATTTCACAAAACAAATTCCTCACAAATCATTGAAGCCCAGTTCACCATAC AAATTACCCATGTCTTACTCTGTTCCTTGTATATATGCATTCTGGGTTTTTTTATTATTAAAGGGGAAGTTAGGGGGGAGGGTGAAGGTC AGTCTGAGGGGAAATCCAGGAAATGTGGTGCCCTTAGAAGGGGGCTGTCAGCTCTTTTCCATAGAGAGGGAAAGAAACTTTGAGAAAATG TTCTTGACCCATTGATTGTATCTGCTGGAAGAAGTCATCTGGGCCTGTTGGGTTGGTATCAGATCAGGGGATTATGCATCCAGCCCCTGG CCCCTTTAATCTATTTGCCTCTTTTTAAAAAAGGTTAAGTCTTCTTGGGTGAGGCTTGCCAGGGAAACTCCTAAGTGGCTTCACTTATTT TTTAAATTTTAATTTAATTTTTAAATTTTTGCTTGGAAGCAGCACTGGTAATAAATGTTTTATTTTTTGTTCATTTTCCCTAAAGGAAAA ATGTCCTTAAGAGATTAAAGCTCTTAATTGATTACTGTCTGGTTACAAACTGGCAAACTGACTAAAATGGGAAGCTGCCACCGTGCCTGA CTCATGTAGCTGATGACCGAAGGCTCATCCTTTCTTTTCTATTTGACAGACATTTACTGAGCTTCAGACTTGAGCCAACCCTGAGCTGGA CTGTGGAGATAAAGCAGTTCCTGCTCTTGAGGAGCTCAATGTCTAATGGAATGCATTTGAATGTATGTGTGGCTGGAGAGTTCATTTATG GTCTTAGGAAAGCCATTTCTGGTCCCATTTAGAAAACTGACCAGCACCCAGCAAGCTGCATTCTACATTTTAGAGACCCCATTGGTATTT GTGAATTTGATTGCACCACCGCTTTTCCTTTACTAAGTAATGTTATGGAAGGAGAATGAATTTTCTCCTCTAGTGATTACAGGACATTAA CATCTCTTCAGAAGCTGCTTTTAGCTTAAGCCCCAAGAAGTGAGGTGGGTTGTGGATCACTGACATGGTCAGGGGAGGCCCACACCTCAA TTCAGTAACCACCTAATCTCTCCCCCAACCTGATCTCTCATCAGAGCTGGCAGCAACTTGGGATTCCTTTCCTTTTTCCTGCCTAACTTT TCATTGAAATGTCTAGTAGGAGAGTGAGAAAAGAGAACAAAGGCTGGGTCACAGTCATAGAATGTTACAGCTGGAATGGGCATGGAAATC ATCCAAGTTAAACTTCTTCTCTGCCCCCCGCCCCCACTTTTTTTTTTTTTTTTTTTTAACCAAACGAACTTGTGATCCAGTGCCCTATTT TATAGTGTGGTTTTCCAGGGTCTGAATAAATAATCATTAAAGTTTGACACACGCAGACACACGCACCAATGATGGGGATACCCCCAAATG ATTTAGGAGGTTATTTTATTTTAATAGTTTTTTCTTCCTGATTTTTTTCAGTTAGTTAGAGTTAAATGTACCTATAGCCCCTGAATACAT GCTCAGGTAGAGAAAGTCTCCATAGTATAAGTAAGTAATATGAATGTGGAATCTTGGAAAGTGATATATTTTGATTGGAATAATTTTAAT TAAATTTAATGATTTTAATTAAGAATTAAAAGCCAGCTAGCCAAATTTTCTTTAAAAATTGGAAACTCATTATGGTCTTAAATTGTCCTC AGGCAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATACCTGGTTATGAATTCTCAAAAGAGAAAGCAGG TCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAAGAGATTTTCTTCTGAAGATGATCTAGGAAATGCATCTTTATACA TGATTGTTAGCTGCTGTAGCTTTCTGAAGAAGATTGTAGAAAAGAGACTAAGATATATGCAAGGGTCACCAGTTTAGAGATCAGTCAAAT TGGAAAAAGTGCCAAGACTGGATGTGCAGATTGTTCTATGTATTATCAGTATTTTTTTCCTCTTAAGAAAAAAATTTACTCTCTCTCCTT TGTGAGTAAATGCCTCCTTAATGCCTTTTAAGTAAGGTGGCAACTTTTAACTGTCATCTTGTGAGAGGCAACCTCAAACTCTAAGCAGAC TCCCTCTCTCCCTTTCTGGTGTCTTAAATCAAGAACTAGTTTGAAGCCAAGGCAAAGCAAGGTTTGTTCATCTTCCTTTCCTGTCATTTA AGGTAAAACAGGCAATGAACTCGCTCTTCAAATACCATAGTTCAAGAGTAGCTGTTGGCCCTGGTTCCAGATTAATATAGCAGCAGGCAG ATTGCCCCTTCTTGGGGCCACCACCCTCCAAAGCTGTGCCACCAATGAGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAAC GCTGAGCCTCCAGCAGAGCACTTAAAAGTCCTAGTGAGAGAATAGATACTATGCAAGGGAAAAAAATTTAAATGCCAACGAATAGTTTTT TTTTTTTTGAACCTGATACACTGTTTGTTTACTCTCAACTCTTTGTACAAATATTATTGTCCTAAGGGCCTTTTCCCCTCCTGCCTAGAA AATAGGTTGTGTATTGGTTTTATTCAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTG CCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACTTGGACCAGGGCATGCCCTGTTGGGGATGTTTCTGTCAGCAAG GACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTACCAAAGTGCATTCTTCAATGTATGTTTGCCTGCTTGAAGCAA >In-frame_ENST00000407086_ENST00000299563_TCGA-BH-A18R_BCAS3_chr17_58786686_+_RNF169_chr11_74521228_length(amino acids)=623AA_start in transcript=48_stop in transcript=1919 MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKIVWVRFENADLNDTSRNLEFHEIHSTGNEPP LLIMIGYSDGMQVWSIPLREEKLQEEKPSEDQIHKLLPEDTETGKRKMDEQKKRDEPLVLKTNLERCPARLSDSENEEPSRGQMTQTHRS AFVSKNNSYSLAFLAGKLNSKVERSQSCSDTAQERAKSRVRAVPGNKAKVTTMTPASNPIIGVLLSTQNNRCVSAPDLTIEKRLPFSSLS SLASLHKPERSVSPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQKQTSYEASPRILKKWEQIFQERQIKK TLSKATLTSLAPEMGEELLGSEGIHSSKEKPLVAVNTRLSGGQVLSEYTGPTSADLDHFPSVSQTKAEQDSDNKSSTEIPLETCCSSELK GGGSGTSLEREQFEGLGSTPDAKLDKTCISRAMKITTVNSVLPQNSVLGGVLKTKQQLKTLNHFDLTNGVLVESLSEEPLPSLRRGRKRH -------------------------------------------------------------- >In-frame_ENST00000390652_ENST00000299563_TCGA-BH-A18R_BCAS3_chr17_58786686_+_RNF169_chr11_74521228_length(transcript)=7586nt_BP=352nt ACTAGCGTTAACCGGCGGGGCGGCCGGTTTTATGAATGAAGCTATGGCTACAGATTCCCCAAGAAGACCCAGTCGTTGTACTGGTGGAGT TGTGGTTCGCCCCCAGGCTGTCACAGAGCAGTCCTACATGGAAAGTGTTGTGACTTTTCTGCAGGATGTTGTGCCACAGGCTTACAGTGG AACACCTCTAACAGAAGAAAAGGAGAAAATAGTCTGGGTCAGATTTGAAAATGCAGATTTAAATGATACATCAAGAAATCTGGAATTTCA TGAAATACATAGTACTGGGAATGAACCGCCTTTGTTGATTATGATTGGCTACAGTGATGGAATGCAGGTCTGGAGCATCCCTCTGAGAGA AGAAAAGTTACAAGAGGAAAAACCCTCTGAAGATCAAATCCACAAGCTGTTACCAGAGGATACAGAAACAGGGAAAAGGAAAATGGATGA ACAGAAAAAAAGAGATGAACCATTAGTACTGAAAACAAATCTGGAACGTTGTCCTGCACGTCTCTCAGATTCAGAGAATGAAGAACCTTC TCGAGGCCAGATGACACAGACACATCGCTCGGCATTTGTTTCCAAGAACAACTCCTACTCCTTAGCTTTCCTGGCAGGGAAGCTAAACTC CAAGGTGGAAAGGAGTCAGAGCTGTAGTGACACAGCCCAGGAAAGAGCGAAGAGCAGAGTCAGAGCAGTTCCAGGCAACAAAGCCAAGGT CACAACTATGACTCCAGCCTCCAACCCCATCATTGGTGTCCTCTTGTCAACTCAAAACAACCGCTGCGTCTCGGCCCCTGACTTAACCAT CGAAAAGCGTCTACCCTTCAGCTCCCTTTCATCCTTGGCTTCCCTGCATAAGCCAGAGCGTTCTGTCAGCCCTGAGAGCAATGACAGCAT CTCCGAAGAACTAAACCATTTCAAGCCCATTGTCTGCTCACCATGTACTCCTCCCAAGAGACTCCCTGATGGCCGTGTGCTAAGTCCTCT CATCATCAAATCAACTCCACGCAACCTAAACAGAAGCCTGCAGAAGCAGACTTCTTATGAGGCCAGTCCACGGATCCTCAAAAAGTGGGA ACAGATCTTTCAGGAGCGGCAGATCAAAAAGACCCTTTCAAAAGCCACTCTTACCTCTCTGGCTCCTGAAATGGGGGAAGAGTTACTAGG CTCTGAAGGTATCCATTCTAGCAAGGAGAAGCCACTTGTGGCTGTAAATACAAGATTATCTGGTGGGCAGGTCCTCTCTGAGTATACTGG ACCCACCTCTGCTGATCTTGATCATTTCCCCTCTGTTAGCCAAACAAAAGCAGAACAGGACAGTGATAATAAAAGTAGCACTGAGATCCC ACTGGAAACCTGCTGTTCCTCAGAACTCAAAGGGGGAGGCAGTGGGACTTCTTTGGAGAGGGAGCAGTTTGAGGGGTTAGGGTCAACTCC AGATGCCAAGTTAGACAAAACCTGTATAAGCAGAGCCATGAAAATCACCACAGTTAATTCAGTGCTACCCCAAAACAGTGTTTTGGGTGG AGTCCTCAAAACAAAGCAACAATTGAAGACATTAAATCATTTTGATCTGACTAATGGTGTTCTAGTTGAGAGCCTAAGTGAAGAGCCACT TCCTTCTTTGCGTCGAGGCCGGAAAAGACACTGCAAGACCAAGCACTTAGAACAAAATGGCTCCCTTAAAAAACTGCGACAAACCAGTGG GGAGGTGGGTCTGGCCCCAACAGACCCAGTCCTGCGAGAGATGGAGCAGAAGCTTCAGCAAGAGGAAGAAGACCGACAGTTGGCTCTGCA GTTGCAGCGCATGTTCGACAATGAGAGGCGGACTGTGAGCCGGCGAAAAGGAAGTGTGGATCAGTATCTCCTACGGTCCAGCAACATGGC CGGGGCCAAGTAGCACCTAATGAAGTGTTACCTATTTTTAAAAGGTCTTAGGCCTTGATCATTTATCCTGAAGAGCTGAGTGTTCTCACT TTGGTTTTATTTTAATGGCAAAACACTGTCTAATATGGTTCTGAGAGGTTCCAGGGCCTTTGTAGTCAATATCCAAGGGAAAAGCATCTC CGTTTCTCTGTGACCCAGGCCAGAAGCCTGAGTGACCCATCCCTAAGGGCTTCTGGGCCAAACCTGGCAGCACCCACTGGGAATGAGATT TGGAACGGCCTCAGGAGCATAATGGCCACAGTTAGTAATGGTAAAGAGGGGATACCTTCTTAAACTGATAGACTTCCTGACTTCTTTCAG CAGGGTATTGTTTTAAATCAGCCTTGCAGATAAAAATTAATTCCATCTTTTTCAGACAAGTGAACAATTTAGTTCCTTGGCAGATCCAAA ATGATAGATGGTTATGTTACGCTTTCTGCTGTCCCTTGCCAAAAATAAGTAAATATATCAGTTAAGATTATGCCTTTACAAAAGTTAATT TACATTCTCTGTTTAAAAAATAATATTTGGTGAATGCTATATAGTTGACAGAGCACATTTACAGACCTTATTAATTTAGTCTTTCCAAGA GACCTCTCATGTAACTGGCATTAGCCCCATTTTTAGATGATGAAACTGCAGTGCAGATGTTCTGGTTCTCTCAACTACCAAGTGGCATAA CCCATGGATTTTCTAAAGGTTTCCCAAATAGATCACAACCTAAGGGTGTGCCAGGGGAGCCTAGGGGAAGCTAGGCTGGGCATTGAACAC TGATAGTGCAGAATCCACATGCAAACAAGATCGACAGGGTGGATAAACATATATGTGCATTATCCCCATCCCCCACAGTTTAGAGCCTTC TGCTTTTCTGGGGGTTTCAGCCTATGAGACAAACTATAATCAGGCTTCATTATTACTTTTCAAATGGCCAAGGGTTATCTGCAATGTTGA TCTAAAATCCTAAAAAATCACCCTGAAGTCAGGCAAGGAACAATACTTAAACTCCATACTATGGAAACAAGGTATCTAGCTGGATGCAGC TGGTAAATTCAGTCCCATGGACCTTTGGGGGTTTATTTTCCTTAGCAGCTGACACCATGTGTCTTTTGCATCCCTGGTGGTGCTTGGTGC TTCTGCCCATCTGGGCTCATTGAGAATAGGGATGAAGATATGATTTTAGGGAATTTCTGATGGGCTGGCATGCCCCATGTAGTATGAGTT ACTATATAAAGTCATGTGACTGGCATTTTAACAGACCTTCCAGAGCTTATATATCCCAATATATGTTGTTTCCTTTGAGTAGCCCCAGCA GGATACTGCTTAGTTTTTCCAGTGCCATTGGTGAAAGCATTTCTGGAACTGTCTTCAAAGACTAGAAACACTGACTCCCAAAATGCTAGA ACTGGAAGGGACCTTAATGGTTATCTATTCCAGCCTCCTCCTAAGGTCCTCCTCAGCTTCTAGACCTAGAAGCCAAAGTCCAGAACAGTG ACCCATTGATCAAGGCAGATAGTATAACTCCTTTTAAGTGTTCTCAGATTTGCCTTTTCTCAGGGCAAATCTTCAGTGTTTTGTGGTTAT TTGTGGTTGAGAGAGAGAGAGAATGTAATGTCTGAGACTAGCCAGCAGCTATTTGAAGCCTCTGGGAAAGAAGGTGGCTTATCAAGTGGG TTTGTAGTAATGAGTGCTGCTGTAAAGCAGAGCCATTTTCTTGTGCAGCTCATAGTTCCCAAACAGTTCCCAAACAGAAATTCCAGAGAT GTCTTAAACATTGTGGTCATCATTGAGATAGGTGGAATCTCTTTGGTGACTACGTTGGTGGGGAACATCACTCACCTGAATGTATGCATT CTGTGTTCTCTGTGTGTGTGCACATATGCAGATGTATGTTTTAAAAACATTTACCAAACTCATGATTTTGTAGTCACACCACTTCAGTTC TGGGCCCTACCAACAATTTATGTCCTCCAAGAGCTGCTGGAGGGCATGTTTGTGCCCAAAACAGAAGAGCTGGCTCTGGTTTACAGAAGA CAGGGAGGGTGACCTTACTATAAATGCCCTTAGAGGAAACTTATCAGTTACTGCCATTTCACGCATTTCCTTTTTGATCTTAGTAAATAT TATTGGAAGGCTAGTCTTGTTGGTAGGAGCAAAGACACTTATTTTTCCACTTGCCATCTTTCTCTATATCTCCAGTAATTTGAAAAACAC TTTTCAGTTGGAATTGATTTTTGTCTTTGGTAAAAAGAAATATTTTTAATAGATAAAAGATATATATTTTAAATATTTCCCCAAATTAAT ACTTTCATTTTAAGAATTGCATAGCAGTTGTAACAAGTGCAGAATGAAGAACAAATTCTTGTTAAGCAAATAGTCCAAACTCTAGGTCCA GCTTACTGCCTTCCCCCCTTGTACCTACAGTGATGCCTAGGATGGTATTGACAGTTGTTTTCTAAACTTCCTGCTGAGCAACAGTCCTTC AAATATAGGTAGAGTGGTCTAGGTTAAGGAGGGAGGAGGGTTGATCTTTAATCAGGTTGGCTTTGGAGGAAGGAAAAACCACTAAGGTAT TATCTGAATTTTAAGATGCTTCCCATCCTTAATAACTAAAACCTGAATGCTTTTCTTTCTGAAAAATCTCCCTCTCTCCTTCCATGATTC TGAAGTTGGTTAAAAGTCGATATGTTGATGTGTATTATTTGGGGGAACAGAAAAGGACAAGGAAGGAAACAGAACGATGGGAAGGGTTTG TGAGCTAGAATAAGAGGTGCAGGATTTCACAAAACAAATTCCTCACAAATCATTGAAGCCCAGTTCACCATACAAATTACCCATGTCTTA CTCTGTTCCTTGTATATATGCATTCTGGGTTTTTTTATTATTAAAGGGGAAGTTAGGGGGGAGGGTGAAGGTCAGTCTGAGGGGAAATCC AGGAAATGTGGTGCCCTTAGAAGGGGGCTGTCAGCTCTTTTCCATAGAGAGGGAAAGAAACTTTGAGAAAATGTTCTTGACCCATTGATT GTATCTGCTGGAAGAAGTCATCTGGGCCTGTTGGGTTGGTATCAGATCAGGGGATTATGCATCCAGCCCCTGGCCCCTTTAATCTATTTG CCTCTTTTTAAAAAAGGTTAAGTCTTCTTGGGTGAGGCTTGCCAGGGAAACTCCTAAGTGGCTTCACTTATTTTTTAAATTTTAATTTAA TTTTTAAATTTTTGCTTGGAAGCAGCACTGGTAATAAATGTTTTATTTTTTGTTCATTTTCCCTAAAGGAAAAATGTCCTTAAGAGATTA AAGCTCTTAATTGATTACTGTCTGGTTACAAACTGGCAAACTGACTAAAATGGGAAGCTGCCACCGTGCCTGACTCATGTAGCTGATGAC CGAAGGCTCATCCTTTCTTTTCTATTTGACAGACATTTACTGAGCTTCAGACTTGAGCCAACCCTGAGCTGGACTGTGGAGATAAAGCAG TTCCTGCTCTTGAGGAGCTCAATGTCTAATGGAATGCATTTGAATGTATGTGTGGCTGGAGAGTTCATTTATGGTCTTAGGAAAGCCATT TCTGGTCCCATTTAGAAAACTGACCAGCACCCAGCAAGCTGCATTCTACATTTTAGAGACCCCATTGGTATTTGTGAATTTGATTGCACC ACCGCTTTTCCTTTACTAAGTAATGTTATGGAAGGAGAATGAATTTTCTCCTCTAGTGATTACAGGACATTAACATCTCTTCAGAAGCTG CTTTTAGCTTAAGCCCCAAGAAGTGAGGTGGGTTGTGGATCACTGACATGGTCAGGGGAGGCCCACACCTCAATTCAGTAACCACCTAAT CTCTCCCCCAACCTGATCTCTCATCAGAGCTGGCAGCAACTTGGGATTCCTTTCCTTTTTCCTGCCTAACTTTTCATTGAAATGTCTAGT AGGAGAGTGAGAAAAGAGAACAAAGGCTGGGTCACAGTCATAGAATGTTACAGCTGGAATGGGCATGGAAATCATCCAAGTTAAACTTCT TCTCTGCCCCCCGCCCCCACTTTTTTTTTTTTTTTTTTTTAACCAAACGAACTTGTGATCCAGTGCCCTATTTTATAGTGTGGTTTTCCA GGGTCTGAATAAATAATCATTAAAGTTTGACACACGCAGACACACGCACCAATGATGGGGATACCCCCAAATGATTTAGGAGGTTATTTT ATTTTAATAGTTTTTTCTTCCTGATTTTTTTCAGTTAGTTAGAGTTAAATGTACCTATAGCCCCTGAATACATGCTCAGGTAGAGAAAGT CTCCATAGTATAAGTAAGTAATATGAATGTGGAATCTTGGAAAGTGATATATTTTGATTGGAATAATTTTAATTAAATTTAATGATTTTA ATTAAGAATTAAAAGCCAGCTAGCCAAATTTTCTTTAAAAATTGGAAACTCATTATGGTCTTAAATTGTCCTCAGGCAGCCTTTTCCTCA TCAACCCATAGAGTGGTCTTTTGAACTGGTATCTAAACATACCTGGTTATGAATTCTCAAAAGAGAAAGCAGGTCTGGGGCGGGGTGGTC AGGAGACAGATTCTAGGGAAAGTGCTGAAGAGATTTTCTTCTGAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGT AGCTTTCTGAAGAAGATTGTAGAAAAGAGACTAAGATATATGCAAGGGTCACCAGTTTAGAGATCAGTCAAATTGGAAAAAGTGCCAAGA CTGGATGTGCAGATTGTTCTATGTATTATCAGTATTTTTTTCCTCTTAAGAAAAAAATTTACTCTCTCTCCTTTGTGAGTAAATGCCTCC TTAATGCCTTTTAAGTAAGGTGGCAACTTTTAACTGTCATCTTGTGAGAGGCAACCTCAAACTCTAAGCAGACTCCCTCTCTCCCTTTCT GGTGTCTTAAATCAAGAACTAGTTTGAAGCCAAGGCAAAGCAAGGTTTGTTCATCTTCCTTTCCTGTCATTTAAGGTAAAACAGGCAATG AACTCGCTCTTCAAATACCATAGTTCAAGAGTAGCTGTTGGCCCTGGTTCCAGATTAATATAGCAGCAGGCAGATTGCCCCTTCTTGGGG CCACCACCCTCCAAAGCTGTGCCACCAATGAGAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCAGCAGA GCACTTAAAAGTCCTAGTGAGAGAATAGATACTATGCAAGGGAAAAAAATTTAAATGCCAACGAATAGTTTTTTTTTTTTTGAACCTGAT ACACTGTTTGTTTACTCTCAACTCTTTGTACAAATATTATTGTCCTAAGGGCCTTTTCCCCTCCTGCCTAGAAAATAGGTTGTGTATTGG TTTTATTCAACCTGCTGTCTGCTTTAGGATTGGAGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCAT CAGAAGAGCATTTTGACAAAGACAGAGGACTTGGACCAGGGCATGCCCTGTTGGGGATGTTTCTGTCAGCAAGGACATGGCATGGAATCA AGTGGGCTGATGTGTTGTTATTTAAACAGTACCAAAGTGCATTCTTCAATGTATGTTTGCCTGCTTGAAGCAAGGCCCAAGTTGAGAATA >In-frame_ENST00000390652_ENST00000299563_TCGA-BH-A18R_BCAS3_chr17_58786686_+_RNF169_chr11_74521228_length(amino acids)=623AA_start in transcript=31_stop in transcript=1902 MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKIVWVRFENADLNDTSRNLEFHEIHSTGNEPP LLIMIGYSDGMQVWSIPLREEKLQEEKPSEDQIHKLLPEDTETGKRKMDEQKKRDEPLVLKTNLERCPARLSDSENEEPSRGQMTQTHRS AFVSKNNSYSLAFLAGKLNSKVERSQSCSDTAQERAKSRVRAVPGNKAKVTTMTPASNPIIGVLLSTQNNRCVSAPDLTIEKRLPFSSLS SLASLHKPERSVSPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQKQTSYEASPRILKKWEQIFQERQIKK TLSKATLTSLAPEMGEELLGSEGIHSSKEKPLVAVNTRLSGGQVLSEYTGPTSADLDHFPSVSQTKAEQDSDNKSSTEIPLETCCSSELK GGGSGTSLEREQFEGLGSTPDAKLDKTCISRAMKITTVNSVLPQNSVLGGVLKTKQQLKTLNHFDLTNGVLVESLSEEPLPSLRRGRKRH -------------------------------------------------------------- >In-frame_ENST00000408905_ENST00000299563_TCGA-BH-A18R_BCAS3_chr17_58786686_+_RNF169_chr11_74521228_length(transcript)=7555nt_BP=321nt ATGAATGAAGCTATGGCTACAGATTCCCCAAGAAGACCCAGTCGTTGTACTGGTGGAGTTGTGGTTCGCCCCCAGGCTGTCACAGAGCAG TCCTACATGGAAAGTGTTGTGACTTTTCTGCAGGATGTTGTGCCACAGGCTTACAGTGGAACACCTCTAACAGAAGAAAAGGAGAAAATA GTCTGGGTCAGATTTGAAAATGCAGATTTAAATGATACATCAAGAAATCTGGAATTTCATGAAATACATAGTACTGGGAATGAACCGCCT TTGTTGATTATGATTGGCTACAGTGATGGAATGCAGGTCTGGAGCATCCCTCTGAGAGAAGAAAAGTTACAAGAGGAAAAACCCTCTGAA GATCAAATCCACAAGCTGTTACCAGAGGATACAGAAACAGGGAAAAGGAAAATGGATGAACAGAAAAAAAGAGATGAACCATTAGTACTG AAAACAAATCTGGAACGTTGTCCTGCACGTCTCTCAGATTCAGAGAATGAAGAACCTTCTCGAGGCCAGATGACACAGACACATCGCTCG GCATTTGTTTCCAAGAACAACTCCTACTCCTTAGCTTTCCTGGCAGGGAAGCTAAACTCCAAGGTGGAAAGGAGTCAGAGCTGTAGTGAC ACAGCCCAGGAAAGAGCGAAGAGCAGAGTCAGAGCAGTTCCAGGCAACAAAGCCAAGGTCACAACTATGACTCCAGCCTCCAACCCCATC ATTGGTGTCCTCTTGTCAACTCAAAACAACCGCTGCGTCTCGGCCCCTGACTTAACCATCGAAAAGCGTCTACCCTTCAGCTCCCTTTCA TCCTTGGCTTCCCTGCATAAGCCAGAGCGTTCTGTCAGCCCTGAGAGCAATGACAGCATCTCCGAAGAACTAAACCATTTCAAGCCCATT GTCTGCTCACCATGTACTCCTCCCAAGAGACTCCCTGATGGCCGTGTGCTAAGTCCTCTCATCATCAAATCAACTCCACGCAACCTAAAC AGAAGCCTGCAGAAGCAGACTTCTTATGAGGCCAGTCCACGGATCCTCAAAAAGTGGGAACAGATCTTTCAGGAGCGGCAGATCAAAAAG ACCCTTTCAAAAGCCACTCTTACCTCTCTGGCTCCTGAAATGGGGGAAGAGTTACTAGGCTCTGAAGGTATCCATTCTAGCAAGGAGAAG CCACTTGTGGCTGTAAATACAAGATTATCTGGTGGGCAGGTCCTCTCTGAGTATACTGGACCCACCTCTGCTGATCTTGATCATTTCCCC TCTGTTAGCCAAACAAAAGCAGAACAGGACAGTGATAATAAAAGTAGCACTGAGATCCCACTGGAAACCTGCTGTTCCTCAGAACTCAAA GGGGGAGGCAGTGGGACTTCTTTGGAGAGGGAGCAGTTTGAGGGGTTAGGGTCAACTCCAGATGCCAAGTTAGACAAAACCTGTATAAGC AGAGCCATGAAAATCACCACAGTTAATTCAGTGCTACCCCAAAACAGTGTTTTGGGTGGAGTCCTCAAAACAAAGCAACAATTGAAGACA TTAAATCATTTTGATCTGACTAATGGTGTTCTAGTTGAGAGCCTAAGTGAAGAGCCACTTCCTTCTTTGCGTCGAGGCCGGAAAAGACAC TGCAAGACCAAGCACTTAGAACAAAATGGCTCCCTTAAAAAACTGCGACAAACCAGTGGGGAGGTGGGTCTGGCCCCAACAGACCCAGTC CTGCGAGAGATGGAGCAGAAGCTTCAGCAAGAGGAAGAAGACCGACAGTTGGCTCTGCAGTTGCAGCGCATGTTCGACAATGAGAGGCGG ACTGTGAGCCGGCGAAAAGGAAGTGTGGATCAGTATCTCCTACGGTCCAGCAACATGGCCGGGGCCAAGTAGCACCTAATGAAGTGTTAC CTATTTTTAAAAGGTCTTAGGCCTTGATCATTTATCCTGAAGAGCTGAGTGTTCTCACTTTGGTTTTATTTTAATGGCAAAACACTGTCT AATATGGTTCTGAGAGGTTCCAGGGCCTTTGTAGTCAATATCCAAGGGAAAAGCATCTCCGTTTCTCTGTGACCCAGGCCAGAAGCCTGA GTGACCCATCCCTAAGGGCTTCTGGGCCAAACCTGGCAGCACCCACTGGGAATGAGATTTGGAACGGCCTCAGGAGCATAATGGCCACAG TTAGTAATGGTAAAGAGGGGATACCTTCTTAAACTGATAGACTTCCTGACTTCTTTCAGCAGGGTATTGTTTTAAATCAGCCTTGCAGAT AAAAATTAATTCCATCTTTTTCAGACAAGTGAACAATTTAGTTCCTTGGCAGATCCAAAATGATAGATGGTTATGTTACGCTTTCTGCTG TCCCTTGCCAAAAATAAGTAAATATATCAGTTAAGATTATGCCTTTACAAAAGTTAATTTACATTCTCTGTTTAAAAAATAATATTTGGT GAATGCTATATAGTTGACAGAGCACATTTACAGACCTTATTAATTTAGTCTTTCCAAGAGACCTCTCATGTAACTGGCATTAGCCCCATT TTTAGATGATGAAACTGCAGTGCAGATGTTCTGGTTCTCTCAACTACCAAGTGGCATAACCCATGGATTTTCTAAAGGTTTCCCAAATAG ATCACAACCTAAGGGTGTGCCAGGGGAGCCTAGGGGAAGCTAGGCTGGGCATTGAACACTGATAGTGCAGAATCCACATGCAAACAAGAT CGACAGGGTGGATAAACATATATGTGCATTATCCCCATCCCCCACAGTTTAGAGCCTTCTGCTTTTCTGGGGGTTTCAGCCTATGAGACA AACTATAATCAGGCTTCATTATTACTTTTCAAATGGCCAAGGGTTATCTGCAATGTTGATCTAAAATCCTAAAAAATCACCCTGAAGTCA GGCAAGGAACAATACTTAAACTCCATACTATGGAAACAAGGTATCTAGCTGGATGCAGCTGGTAAATTCAGTCCCATGGACCTTTGGGGG TTTATTTTCCTTAGCAGCTGACACCATGTGTCTTTTGCATCCCTGGTGGTGCTTGGTGCTTCTGCCCATCTGGGCTCATTGAGAATAGGG ATGAAGATATGATTTTAGGGAATTTCTGATGGGCTGGCATGCCCCATGTAGTATGAGTTACTATATAAAGTCATGTGACTGGCATTTTAA CAGACCTTCCAGAGCTTATATATCCCAATATATGTTGTTTCCTTTGAGTAGCCCCAGCAGGATACTGCTTAGTTTTTCCAGTGCCATTGG TGAAAGCATTTCTGGAACTGTCTTCAAAGACTAGAAACACTGACTCCCAAAATGCTAGAACTGGAAGGGACCTTAATGGTTATCTATTCC AGCCTCCTCCTAAGGTCCTCCTCAGCTTCTAGACCTAGAAGCCAAAGTCCAGAACAGTGACCCATTGATCAAGGCAGATAGTATAACTCC TTTTAAGTGTTCTCAGATTTGCCTTTTCTCAGGGCAAATCTTCAGTGTTTTGTGGTTATTTGTGGTTGAGAGAGAGAGAGAATGTAATGT CTGAGACTAGCCAGCAGCTATTTGAAGCCTCTGGGAAAGAAGGTGGCTTATCAAGTGGGTTTGTAGTAATGAGTGCTGCTGTAAAGCAGA GCCATTTTCTTGTGCAGCTCATAGTTCCCAAACAGTTCCCAAACAGAAATTCCAGAGATGTCTTAAACATTGTGGTCATCATTGAGATAG GTGGAATCTCTTTGGTGACTACGTTGGTGGGGAACATCACTCACCTGAATGTATGCATTCTGTGTTCTCTGTGTGTGTGCACATATGCAG ATGTATGTTTTAAAAACATTTACCAAACTCATGATTTTGTAGTCACACCACTTCAGTTCTGGGCCCTACCAACAATTTATGTCCTCCAAG AGCTGCTGGAGGGCATGTTTGTGCCCAAAACAGAAGAGCTGGCTCTGGTTTACAGAAGACAGGGAGGGTGACCTTACTATAAATGCCCTT AGAGGAAACTTATCAGTTACTGCCATTTCACGCATTTCCTTTTTGATCTTAGTAAATATTATTGGAAGGCTAGTCTTGTTGGTAGGAGCA AAGACACTTATTTTTCCACTTGCCATCTTTCTCTATATCTCCAGTAATTTGAAAAACACTTTTCAGTTGGAATTGATTTTTGTCTTTGGT AAAAAGAAATATTTTTAATAGATAAAAGATATATATTTTAAATATTTCCCCAAATTAATACTTTCATTTTAAGAATTGCATAGCAGTTGT AACAAGTGCAGAATGAAGAACAAATTCTTGTTAAGCAAATAGTCCAAACTCTAGGTCCAGCTTACTGCCTTCCCCCCTTGTACCTACAGT GATGCCTAGGATGGTATTGACAGTTGTTTTCTAAACTTCCTGCTGAGCAACAGTCCTTCAAATATAGGTAGAGTGGTCTAGGTTAAGGAG GGAGGAGGGTTGATCTTTAATCAGGTTGGCTTTGGAGGAAGGAAAAACCACTAAGGTATTATCTGAATTTTAAGATGCTTCCCATCCTTA ATAACTAAAACCTGAATGCTTTTCTTTCTGAAAAATCTCCCTCTCTCCTTCCATGATTCTGAAGTTGGTTAAAAGTCGATATGTTGATGT GTATTATTTGGGGGAACAGAAAAGGACAAGGAAGGAAACAGAACGATGGGAAGGGTTTGTGAGCTAGAATAAGAGGTGCAGGATTTCACA AAACAAATTCCTCACAAATCATTGAAGCCCAGTTCACCATACAAATTACCCATGTCTTACTCTGTTCCTTGTATATATGCATTCTGGGTT TTTTTATTATTAAAGGGGAAGTTAGGGGGGAGGGTGAAGGTCAGTCTGAGGGGAAATCCAGGAAATGTGGTGCCCTTAGAAGGGGGCTGT CAGCTCTTTTCCATAGAGAGGGAAAGAAACTTTGAGAAAATGTTCTTGACCCATTGATTGTATCTGCTGGAAGAAGTCATCTGGGCCTGT TGGGTTGGTATCAGATCAGGGGATTATGCATCCAGCCCCTGGCCCCTTTAATCTATTTGCCTCTTTTTAAAAAAGGTTAAGTCTTCTTGG GTGAGGCTTGCCAGGGAAACTCCTAAGTGGCTTCACTTATTTTTTAAATTTTAATTTAATTTTTAAATTTTTGCTTGGAAGCAGCACTGG TAATAAATGTTTTATTTTTTGTTCATTTTCCCTAAAGGAAAAATGTCCTTAAGAGATTAAAGCTCTTAATTGATTACTGTCTGGTTACAA ACTGGCAAACTGACTAAAATGGGAAGCTGCCACCGTGCCTGACTCATGTAGCTGATGACCGAAGGCTCATCCTTTCTTTTCTATTTGACA GACATTTACTGAGCTTCAGACTTGAGCCAACCCTGAGCTGGACTGTGGAGATAAAGCAGTTCCTGCTCTTGAGGAGCTCAATGTCTAATG GAATGCATTTGAATGTATGTGTGGCTGGAGAGTTCATTTATGGTCTTAGGAAAGCCATTTCTGGTCCCATTTAGAAAACTGACCAGCACC CAGCAAGCTGCATTCTACATTTTAGAGACCCCATTGGTATTTGTGAATTTGATTGCACCACCGCTTTTCCTTTACTAAGTAATGTTATGG AAGGAGAATGAATTTTCTCCTCTAGTGATTACAGGACATTAACATCTCTTCAGAAGCTGCTTTTAGCTTAAGCCCCAAGAAGTGAGGTGG GTTGTGGATCACTGACATGGTCAGGGGAGGCCCACACCTCAATTCAGTAACCACCTAATCTCTCCCCCAACCTGATCTCTCATCAGAGCT GGCAGCAACTTGGGATTCCTTTCCTTTTTCCTGCCTAACTTTTCATTGAAATGTCTAGTAGGAGAGTGAGAAAAGAGAACAAAGGCTGGG TCACAGTCATAGAATGTTACAGCTGGAATGGGCATGGAAATCATCCAAGTTAAACTTCTTCTCTGCCCCCCGCCCCCACTTTTTTTTTTT TTTTTTTTTAACCAAACGAACTTGTGATCCAGTGCCCTATTTTATAGTGTGGTTTTCCAGGGTCTGAATAAATAATCATTAAAGTTTGAC ACACGCAGACACACGCACCAATGATGGGGATACCCCCAAATGATTTAGGAGGTTATTTTATTTTAATAGTTTTTTCTTCCTGATTTTTTT CAGTTAGTTAGAGTTAAATGTACCTATAGCCCCTGAATACATGCTCAGGTAGAGAAAGTCTCCATAGTATAAGTAAGTAATATGAATGTG GAATCTTGGAAAGTGATATATTTTGATTGGAATAATTTTAATTAAATTTAATGATTTTAATTAAGAATTAAAAGCCAGCTAGCCAAATTT TCTTTAAAAATTGGAAACTCATTATGGTCTTAAATTGTCCTCAGGCAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTA TCTAAACATACCTGGTTATGAATTCTCAAAAGAGAAAGCAGGTCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAAGA GATTTTCTTCTGAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTCTGAAGAAGATTGTAGAAAAGAGAC TAAGATATATGCAAGGGTCACCAGTTTAGAGATCAGTCAAATTGGAAAAAGTGCCAAGACTGGATGTGCAGATTGTTCTATGTATTATCA GTATTTTTTTCCTCTTAAGAAAAAAATTTACTCTCTCTCCTTTGTGAGTAAATGCCTCCTTAATGCCTTTTAAGTAAGGTGGCAACTTTT AACTGTCATCTTGTGAGAGGCAACCTCAAACTCTAAGCAGACTCCCTCTCTCCCTTTCTGGTGTCTTAAATCAAGAACTAGTTTGAAGCC AAGGCAAAGCAAGGTTTGTTCATCTTCCTTTCCTGTCATTTAAGGTAAAACAGGCAATGAACTCGCTCTTCAAATACCATAGTTCAAGAG TAGCTGTTGGCCCTGGTTCCAGATTAATATAGCAGCAGGCAGATTGCCCCTTCTTGGGGCCACCACCCTCCAAAGCTGTGCCACCAATGA GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCAGCAGAGCACTTAAAAGTCCTAGTGAGAGAATAGATA CTATGCAAGGGAAAAAAATTTAAATGCCAACGAATAGTTTTTTTTTTTTTGAACCTGATACACTGTTTGTTTACTCTCAACTCTTTGTAC AAATATTATTGTCCTAAGGGCCTTTTCCCCTCCTGCCTAGAAAATAGGTTGTGTATTGGTTTTATTCAACCTGCTGTCTGCTTTAGGATT GGAGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACT TGGACCAGGGCATGCCCTGTTGGGGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTA >In-frame_ENST00000408905_ENST00000299563_TCGA-BH-A18R_BCAS3_chr17_58786686_+_RNF169_chr11_74521228_length(amino acids)=623AA_start in transcript=0_stop in transcript=1871 MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKIVWVRFENADLNDTSRNLEFHEIHSTGNEPP LLIMIGYSDGMQVWSIPLREEKLQEEKPSEDQIHKLLPEDTETGKRKMDEQKKRDEPLVLKTNLERCPARLSDSENEEPSRGQMTQTHRS AFVSKNNSYSLAFLAGKLNSKVERSQSCSDTAQERAKSRVRAVPGNKAKVTTMTPASNPIIGVLLSTQNNRCVSAPDLTIEKRLPFSSLS SLASLHKPERSVSPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQKQTSYEASPRILKKWEQIFQERQIKK TLSKATLTSLAPEMGEELLGSEGIHSSKEKPLVAVNTRLSGGQVLSEYTGPTSADLDHFPSVSQTKAEQDSDNKSSTEIPLETCCSSELK GGGSGTSLEREQFEGLGSTPDAKLDKTCISRAMKITTVNSVLPQNSVLGGVLKTKQQLKTLNHFDLTNGVLVESLSEEPLPSLRRGRKRH -------------------------------------------------------------- >In-frame_ENST00000588462_ENST00000299563_TCGA-BH-A18R_BCAS3_chr17_58786686_+_RNF169_chr11_74521228_length(transcript)=7555nt_BP=321nt ATGAATGAAGCTATGGCTACAGATTCCCCAAGAAGACCCAGTCGTTGTACTGGTGGAGTTGTGGTTCGCCCCCAGGCTGTCACAGAGCAG TCCTACATGGAAAGTGTTGTGACTTTTCTGCAGGATGTTGTGCCACAGGCTTACAGTGGAACACCTCTAACAGAAGAAAAGGAGAAAATA GTCTGGGTCAGATTTGAAAATGCAGATTTAAATGATACATCAAGAAATCTGGAATTTCATGAAATACATAGTACTGGGAATGAACCGCCT TTGTTGATTATGATTGGCTACAGTGATGGAATGCAGGTCTGGAGCATCCCTCTGAGAGAAGAAAAGTTACAAGAGGAAAAACCCTCTGAA GATCAAATCCACAAGCTGTTACCAGAGGATACAGAAACAGGGAAAAGGAAAATGGATGAACAGAAAAAAAGAGATGAACCATTAGTACTG AAAACAAATCTGGAACGTTGTCCTGCACGTCTCTCAGATTCAGAGAATGAAGAACCTTCTCGAGGCCAGATGACACAGACACATCGCTCG GCATTTGTTTCCAAGAACAACTCCTACTCCTTAGCTTTCCTGGCAGGGAAGCTAAACTCCAAGGTGGAAAGGAGTCAGAGCTGTAGTGAC ACAGCCCAGGAAAGAGCGAAGAGCAGAGTCAGAGCAGTTCCAGGCAACAAAGCCAAGGTCACAACTATGACTCCAGCCTCCAACCCCATC ATTGGTGTCCTCTTGTCAACTCAAAACAACCGCTGCGTCTCGGCCCCTGACTTAACCATCGAAAAGCGTCTACCCTTCAGCTCCCTTTCA TCCTTGGCTTCCCTGCATAAGCCAGAGCGTTCTGTCAGCCCTGAGAGCAATGACAGCATCTCCGAAGAACTAAACCATTTCAAGCCCATT GTCTGCTCACCATGTACTCCTCCCAAGAGACTCCCTGATGGCCGTGTGCTAAGTCCTCTCATCATCAAATCAACTCCACGCAACCTAAAC AGAAGCCTGCAGAAGCAGACTTCTTATGAGGCCAGTCCACGGATCCTCAAAAAGTGGGAACAGATCTTTCAGGAGCGGCAGATCAAAAAG ACCCTTTCAAAAGCCACTCTTACCTCTCTGGCTCCTGAAATGGGGGAAGAGTTACTAGGCTCTGAAGGTATCCATTCTAGCAAGGAGAAG CCACTTGTGGCTGTAAATACAAGATTATCTGGTGGGCAGGTCCTCTCTGAGTATACTGGACCCACCTCTGCTGATCTTGATCATTTCCCC TCTGTTAGCCAAACAAAAGCAGAACAGGACAGTGATAATAAAAGTAGCACTGAGATCCCACTGGAAACCTGCTGTTCCTCAGAACTCAAA GGGGGAGGCAGTGGGACTTCTTTGGAGAGGGAGCAGTTTGAGGGGTTAGGGTCAACTCCAGATGCCAAGTTAGACAAAACCTGTATAAGC AGAGCCATGAAAATCACCACAGTTAATTCAGTGCTACCCCAAAACAGTGTTTTGGGTGGAGTCCTCAAAACAAAGCAACAATTGAAGACA TTAAATCATTTTGATCTGACTAATGGTGTTCTAGTTGAGAGCCTAAGTGAAGAGCCACTTCCTTCTTTGCGTCGAGGCCGGAAAAGACAC TGCAAGACCAAGCACTTAGAACAAAATGGCTCCCTTAAAAAACTGCGACAAACCAGTGGGGAGGTGGGTCTGGCCCCAACAGACCCAGTC CTGCGAGAGATGGAGCAGAAGCTTCAGCAAGAGGAAGAAGACCGACAGTTGGCTCTGCAGTTGCAGCGCATGTTCGACAATGAGAGGCGG ACTGTGAGCCGGCGAAAAGGAAGTGTGGATCAGTATCTCCTACGGTCCAGCAACATGGCCGGGGCCAAGTAGCACCTAATGAAGTGTTAC CTATTTTTAAAAGGTCTTAGGCCTTGATCATTTATCCTGAAGAGCTGAGTGTTCTCACTTTGGTTTTATTTTAATGGCAAAACACTGTCT AATATGGTTCTGAGAGGTTCCAGGGCCTTTGTAGTCAATATCCAAGGGAAAAGCATCTCCGTTTCTCTGTGACCCAGGCCAGAAGCCTGA GTGACCCATCCCTAAGGGCTTCTGGGCCAAACCTGGCAGCACCCACTGGGAATGAGATTTGGAACGGCCTCAGGAGCATAATGGCCACAG TTAGTAATGGTAAAGAGGGGATACCTTCTTAAACTGATAGACTTCCTGACTTCTTTCAGCAGGGTATTGTTTTAAATCAGCCTTGCAGAT AAAAATTAATTCCATCTTTTTCAGACAAGTGAACAATTTAGTTCCTTGGCAGATCCAAAATGATAGATGGTTATGTTACGCTTTCTGCTG TCCCTTGCCAAAAATAAGTAAATATATCAGTTAAGATTATGCCTTTACAAAAGTTAATTTACATTCTCTGTTTAAAAAATAATATTTGGT GAATGCTATATAGTTGACAGAGCACATTTACAGACCTTATTAATTTAGTCTTTCCAAGAGACCTCTCATGTAACTGGCATTAGCCCCATT TTTAGATGATGAAACTGCAGTGCAGATGTTCTGGTTCTCTCAACTACCAAGTGGCATAACCCATGGATTTTCTAAAGGTTTCCCAAATAG ATCACAACCTAAGGGTGTGCCAGGGGAGCCTAGGGGAAGCTAGGCTGGGCATTGAACACTGATAGTGCAGAATCCACATGCAAACAAGAT CGACAGGGTGGATAAACATATATGTGCATTATCCCCATCCCCCACAGTTTAGAGCCTTCTGCTTTTCTGGGGGTTTCAGCCTATGAGACA AACTATAATCAGGCTTCATTATTACTTTTCAAATGGCCAAGGGTTATCTGCAATGTTGATCTAAAATCCTAAAAAATCACCCTGAAGTCA GGCAAGGAACAATACTTAAACTCCATACTATGGAAACAAGGTATCTAGCTGGATGCAGCTGGTAAATTCAGTCCCATGGACCTTTGGGGG TTTATTTTCCTTAGCAGCTGACACCATGTGTCTTTTGCATCCCTGGTGGTGCTTGGTGCTTCTGCCCATCTGGGCTCATTGAGAATAGGG ATGAAGATATGATTTTAGGGAATTTCTGATGGGCTGGCATGCCCCATGTAGTATGAGTTACTATATAAAGTCATGTGACTGGCATTTTAA CAGACCTTCCAGAGCTTATATATCCCAATATATGTTGTTTCCTTTGAGTAGCCCCAGCAGGATACTGCTTAGTTTTTCCAGTGCCATTGG TGAAAGCATTTCTGGAACTGTCTTCAAAGACTAGAAACACTGACTCCCAAAATGCTAGAACTGGAAGGGACCTTAATGGTTATCTATTCC AGCCTCCTCCTAAGGTCCTCCTCAGCTTCTAGACCTAGAAGCCAAAGTCCAGAACAGTGACCCATTGATCAAGGCAGATAGTATAACTCC TTTTAAGTGTTCTCAGATTTGCCTTTTCTCAGGGCAAATCTTCAGTGTTTTGTGGTTATTTGTGGTTGAGAGAGAGAGAGAATGTAATGT CTGAGACTAGCCAGCAGCTATTTGAAGCCTCTGGGAAAGAAGGTGGCTTATCAAGTGGGTTTGTAGTAATGAGTGCTGCTGTAAAGCAGA GCCATTTTCTTGTGCAGCTCATAGTTCCCAAACAGTTCCCAAACAGAAATTCCAGAGATGTCTTAAACATTGTGGTCATCATTGAGATAG GTGGAATCTCTTTGGTGACTACGTTGGTGGGGAACATCACTCACCTGAATGTATGCATTCTGTGTTCTCTGTGTGTGTGCACATATGCAG ATGTATGTTTTAAAAACATTTACCAAACTCATGATTTTGTAGTCACACCACTTCAGTTCTGGGCCCTACCAACAATTTATGTCCTCCAAG AGCTGCTGGAGGGCATGTTTGTGCCCAAAACAGAAGAGCTGGCTCTGGTTTACAGAAGACAGGGAGGGTGACCTTACTATAAATGCCCTT AGAGGAAACTTATCAGTTACTGCCATTTCACGCATTTCCTTTTTGATCTTAGTAAATATTATTGGAAGGCTAGTCTTGTTGGTAGGAGCA AAGACACTTATTTTTCCACTTGCCATCTTTCTCTATATCTCCAGTAATTTGAAAAACACTTTTCAGTTGGAATTGATTTTTGTCTTTGGT AAAAAGAAATATTTTTAATAGATAAAAGATATATATTTTAAATATTTCCCCAAATTAATACTTTCATTTTAAGAATTGCATAGCAGTTGT AACAAGTGCAGAATGAAGAACAAATTCTTGTTAAGCAAATAGTCCAAACTCTAGGTCCAGCTTACTGCCTTCCCCCCTTGTACCTACAGT GATGCCTAGGATGGTATTGACAGTTGTTTTCTAAACTTCCTGCTGAGCAACAGTCCTTCAAATATAGGTAGAGTGGTCTAGGTTAAGGAG GGAGGAGGGTTGATCTTTAATCAGGTTGGCTTTGGAGGAAGGAAAAACCACTAAGGTATTATCTGAATTTTAAGATGCTTCCCATCCTTA ATAACTAAAACCTGAATGCTTTTCTTTCTGAAAAATCTCCCTCTCTCCTTCCATGATTCTGAAGTTGGTTAAAAGTCGATATGTTGATGT GTATTATTTGGGGGAACAGAAAAGGACAAGGAAGGAAACAGAACGATGGGAAGGGTTTGTGAGCTAGAATAAGAGGTGCAGGATTTCACA AAACAAATTCCTCACAAATCATTGAAGCCCAGTTCACCATACAAATTACCCATGTCTTACTCTGTTCCTTGTATATATGCATTCTGGGTT TTTTTATTATTAAAGGGGAAGTTAGGGGGGAGGGTGAAGGTCAGTCTGAGGGGAAATCCAGGAAATGTGGTGCCCTTAGAAGGGGGCTGT CAGCTCTTTTCCATAGAGAGGGAAAGAAACTTTGAGAAAATGTTCTTGACCCATTGATTGTATCTGCTGGAAGAAGTCATCTGGGCCTGT TGGGTTGGTATCAGATCAGGGGATTATGCATCCAGCCCCTGGCCCCTTTAATCTATTTGCCTCTTTTTAAAAAAGGTTAAGTCTTCTTGG GTGAGGCTTGCCAGGGAAACTCCTAAGTGGCTTCACTTATTTTTTAAATTTTAATTTAATTTTTAAATTTTTGCTTGGAAGCAGCACTGG TAATAAATGTTTTATTTTTTGTTCATTTTCCCTAAAGGAAAAATGTCCTTAAGAGATTAAAGCTCTTAATTGATTACTGTCTGGTTACAA ACTGGCAAACTGACTAAAATGGGAAGCTGCCACCGTGCCTGACTCATGTAGCTGATGACCGAAGGCTCATCCTTTCTTTTCTATTTGACA GACATTTACTGAGCTTCAGACTTGAGCCAACCCTGAGCTGGACTGTGGAGATAAAGCAGTTCCTGCTCTTGAGGAGCTCAATGTCTAATG GAATGCATTTGAATGTATGTGTGGCTGGAGAGTTCATTTATGGTCTTAGGAAAGCCATTTCTGGTCCCATTTAGAAAACTGACCAGCACC CAGCAAGCTGCATTCTACATTTTAGAGACCCCATTGGTATTTGTGAATTTGATTGCACCACCGCTTTTCCTTTACTAAGTAATGTTATGG AAGGAGAATGAATTTTCTCCTCTAGTGATTACAGGACATTAACATCTCTTCAGAAGCTGCTTTTAGCTTAAGCCCCAAGAAGTGAGGTGG GTTGTGGATCACTGACATGGTCAGGGGAGGCCCACACCTCAATTCAGTAACCACCTAATCTCTCCCCCAACCTGATCTCTCATCAGAGCT GGCAGCAACTTGGGATTCCTTTCCTTTTTCCTGCCTAACTTTTCATTGAAATGTCTAGTAGGAGAGTGAGAAAAGAGAACAAAGGCTGGG TCACAGTCATAGAATGTTACAGCTGGAATGGGCATGGAAATCATCCAAGTTAAACTTCTTCTCTGCCCCCCGCCCCCACTTTTTTTTTTT TTTTTTTTTAACCAAACGAACTTGTGATCCAGTGCCCTATTTTATAGTGTGGTTTTCCAGGGTCTGAATAAATAATCATTAAAGTTTGAC ACACGCAGACACACGCACCAATGATGGGGATACCCCCAAATGATTTAGGAGGTTATTTTATTTTAATAGTTTTTTCTTCCTGATTTTTTT CAGTTAGTTAGAGTTAAATGTACCTATAGCCCCTGAATACATGCTCAGGTAGAGAAAGTCTCCATAGTATAAGTAAGTAATATGAATGTG GAATCTTGGAAAGTGATATATTTTGATTGGAATAATTTTAATTAAATTTAATGATTTTAATTAAGAATTAAAAGCCAGCTAGCCAAATTT TCTTTAAAAATTGGAAACTCATTATGGTCTTAAATTGTCCTCAGGCAGCCTTTTCCTCATCAACCCATAGAGTGGTCTTTTGAACTGGTA TCTAAACATACCTGGTTATGAATTCTCAAAAGAGAAAGCAGGTCTGGGGCGGGGTGGTCAGGAGACAGATTCTAGGGAAAGTGCTGAAGA GATTTTCTTCTGAAGATGATCTAGGAAATGCATCTTTATACATGATTGTTAGCTGCTGTAGCTTTCTGAAGAAGATTGTAGAAAAGAGAC TAAGATATATGCAAGGGTCACCAGTTTAGAGATCAGTCAAATTGGAAAAAGTGCCAAGACTGGATGTGCAGATTGTTCTATGTATTATCA GTATTTTTTTCCTCTTAAGAAAAAAATTTACTCTCTCTCCTTTGTGAGTAAATGCCTCCTTAATGCCTTTTAAGTAAGGTGGCAACTTTT AACTGTCATCTTGTGAGAGGCAACCTCAAACTCTAAGCAGACTCCCTCTCTCCCTTTCTGGTGTCTTAAATCAAGAACTAGTTTGAAGCC AAGGCAAAGCAAGGTTTGTTCATCTTCCTTTCCTGTCATTTAAGGTAAAACAGGCAATGAACTCGCTCTTCAAATACCATAGTTCAAGAG TAGCTGTTGGCCCTGGTTCCAGATTAATATAGCAGCAGGCAGATTGCCCCTTCTTGGGGCCACCACCCTCCAAAGCTGTGCCACCAATGA GAGCATTGGGTTCAAGTTTGCATCAAACATGGTATTACCAACGCTGAGCCTCCAGCAGAGCACTTAAAAGTCCTAGTGAGAGAATAGATA CTATGCAAGGGAAAAAAATTTAAATGCCAACGAATAGTTTTTTTTTTTTTGAACCTGATACACTGTTTGTTTACTCTCAACTCTTTGTAC AAATATTATTGTCCTAAGGGCCTTTTCCCCTCCTGCCTAGAAAATAGGTTGTGTATTGGTTTTATTCAACCTGCTGTCTGCTTTAGGATT GGAGAAGGTACCTGGATCCTTGTGGACTGCCACTGCTGGCTGCCTCCTCTCCAACTCATCAGAAGAGCATTTTGACAAAGACAGAGGACT TGGACCAGGGCATGCCCTGTTGGGGATGTTTCTGTCAGCAAGGACATGGCATGGAATCAAGTGGGCTGATGTGTTGTTATTTAAACAGTA >In-frame_ENST00000588462_ENST00000299563_TCGA-BH-A18R_BCAS3_chr17_58786686_+_RNF169_chr11_74521228_length(amino acids)=623AA_start in transcript=0_stop in transcript=1871 MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKIVWVRFENADLNDTSRNLEFHEIHSTGNEPP LLIMIGYSDGMQVWSIPLREEKLQEEKPSEDQIHKLLPEDTETGKRKMDEQKKRDEPLVLKTNLERCPARLSDSENEEPSRGQMTQTHRS AFVSKNNSYSLAFLAGKLNSKVERSQSCSDTAQERAKSRVRAVPGNKAKVTTMTPASNPIIGVLLSTQNNRCVSAPDLTIEKRLPFSSLS SLASLHKPERSVSPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQKQTSYEASPRILKKWEQIFQERQIKK TLSKATLTSLAPEMGEELLGSEGIHSSKEKPLVAVNTRLSGGQVLSEYTGPTSADLDHFPSVSQTKAEQDSDNKSSTEIPLETCCSSELK GGGSGTSLEREQFEGLGSTPDAKLDKTCISRAMKITTVNSVLPQNSVLGGVLKTKQQLKTLNHFDLTNGVLVESLSEEPLPSLRRGRKRH -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for BCAS3-RNF169 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for BCAS3-RNF169 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for BCAS3-RNF169 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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