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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:TRIM24-KIAA1324L (FusionGDB2 ID:93372) |
Fusion Gene Summary for TRIM24-KIAA1324L |
Fusion gene summary |
Fusion gene information | Fusion gene name: TRIM24-KIAA1324L | Fusion gene ID: 93372 | Hgene | Tgene | Gene symbol | TRIM24 | KIAA1324L | Gene ID | 8805 | 222223 |
Gene name | tripartite motif containing 24 | endosome-lysosome associated apoptosis and autophagy regulator family member 2 | |
Synonyms | PTC6|RNF82|TF1A|TIF1|TIF1A|TIF1ALPHA|hTIF1 | EIG121L|KIAA1324L | |
Cytomap | 7q33-q34 | 7q21.12 | |
Type of gene | protein-coding | protein-coding | |
Description | transcription intermediary factor 1-alphaE3 ubiquitin-protein ligase TRIM24RING finger protein 82RING-type E3 ubiquitin transferase TIF1-alphaTIF1-alphatranscriptional intermediary factor 1 | UPF0577 protein KIAA1324-likeEIG121-likeKIAA1324 likeestrogen-induced gene 121-like protein | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000343526, ENST00000415680, ENST00000497516, | ENST00000450689, ENST00000297222, ENST00000444627, ENST00000416314, ENST00000490995, | |
Fusion gene scores | * DoF score | 10 X 9 X 7=630 | 5 X 5 X 3=75 |
# samples | 10 | 5 | |
** MAII score | log2(10/630*10)=-2.65535182861255 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/75*10)=-0.584962500721156 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: TRIM24 [Title/Abstract] AND KIAA1324L [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | TRIM24(138145657)-KIAA1324L(86577238), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | TRIM24 | GO:0016567 | protein ubiquitination | 19556538 |
Hgene | TRIM24 | GO:0071391 | cellular response to estrogen stimulus | 21164480 |
Fusion gene breakpoints across TRIM24 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across KIAA1324L (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUAD | TCGA-44-A479-01A | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
ChimerDB4 | LUAD | TCGA-44-A479-01A | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
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Fusion Gene ORF analysis for TRIM24-KIAA1324L |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000343526 | ENST00000450689 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
5CDS-intron | ENST00000343526 | ENST00000297222 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
5CDS-intron | ENST00000343526 | ENST00000444627 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
5CDS-intron | ENST00000343526 | ENST00000416314 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
5CDS-intron | ENST00000343526 | ENST00000490995 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
In-frame | ENST00000415680 | ENST00000450689 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
5CDS-intron | ENST00000415680 | ENST00000297222 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
5CDS-intron | ENST00000415680 | ENST00000444627 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
5CDS-intron | ENST00000415680 | ENST00000416314 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
5CDS-intron | ENST00000415680 | ENST00000490995 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
intron-3CDS | ENST00000497516 | ENST00000450689 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
intron-intron | ENST00000497516 | ENST00000297222 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
intron-intron | ENST00000497516 | ENST00000444627 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
intron-intron | ENST00000497516 | ENST00000416314 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
intron-intron | ENST00000497516 | ENST00000490995 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000343526 | TRIM24 | chr7 | 138145657 | + | ENST00000450689 | KIAA1324L | chr7 | 86577238 | - | 6924 | 579 | 92 | 3358 | 1088 |
ENST00000415680 | TRIM24 | chr7 | 138145657 | + | ENST00000450689 | KIAA1324L | chr7 | 86577238 | - | 6823 | 478 | 114 | 3257 | 1047 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000343526 | ENST00000450689 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - | 7.65E-05 | 0.99992347 |
ENST00000415680 | ENST00000450689 | TRIM24 | chr7 | 138145657 | + | KIAA1324L | chr7 | 86577238 | - | 6.75E-05 | 0.9999325 |
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Fusion Genomic Features for TRIM24-KIAA1324L |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for TRIM24-KIAA1324L |
Go to FGviewer for the breakpoints of chr7:138145657-chr7:86577238 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000343526 | + | 1 | 19 | 9_15 | 121.33333333333333 | 1051.0 | Compositional bias | Note=Poly-Ala |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000415680 | + | 1 | 19 | 9_15 | 121.33333333333333 | 1017.0 | Compositional bias | Note=Poly-Ala |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000343526 | + | 1 | 19 | 56_82 | 121.33333333333333 | 1051.0 | Zinc finger | RING-type |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000415680 | + | 1 | 19 | 56_82 | 121.33333333333333 | 1017.0 | Zinc finger | RING-type |
Tgene | KIAA1324L | chr7:138145657 | chr7:86577238 | ENST00000297222 | 0 | 18 | 672_877 | 0.0 | 790.0 | Domain | MRH | |
Tgene | KIAA1324L | chr7:138145657 | chr7:86577238 | ENST00000416314 | 0 | 21 | 672_877 | 0 | 863.0 | Domain | MRH | |
Tgene | KIAA1324L | chr7:138145657 | chr7:86577238 | ENST00000450689 | 1 | 22 | 672_877 | 103.33333333333333 | 1030.0 | Domain | MRH | |
Tgene | KIAA1324L | chr7:138145657 | chr7:86577238 | ENST00000297222 | 0 | 18 | 48_929 | 0.0 | 790.0 | Topological domain | Extracellular | |
Tgene | KIAA1324L | chr7:138145657 | chr7:86577238 | ENST00000297222 | 0 | 18 | 951_1029 | 0.0 | 790.0 | Topological domain | Cytoplasmic | |
Tgene | KIAA1324L | chr7:138145657 | chr7:86577238 | ENST00000416314 | 0 | 21 | 48_929 | 0 | 863.0 | Topological domain | Extracellular | |
Tgene | KIAA1324L | chr7:138145657 | chr7:86577238 | ENST00000416314 | 0 | 21 | 951_1029 | 0 | 863.0 | Topological domain | Cytoplasmic | |
Tgene | KIAA1324L | chr7:138145657 | chr7:86577238 | ENST00000450689 | 1 | 22 | 951_1029 | 103.33333333333333 | 1030.0 | Topological domain | Cytoplasmic | |
Tgene | KIAA1324L | chr7:138145657 | chr7:86577238 | ENST00000297222 | 0 | 18 | 930_950 | 0.0 | 790.0 | Transmembrane | Helical | |
Tgene | KIAA1324L | chr7:138145657 | chr7:86577238 | ENST00000416314 | 0 | 21 | 930_950 | 0 | 863.0 | Transmembrane | Helical | |
Tgene | KIAA1324L | chr7:138145657 | chr7:86577238 | ENST00000450689 | 1 | 22 | 930_950 | 103.33333333333333 | 1030.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000343526 | + | 1 | 19 | 289_359 | 121.33333333333333 | 1051.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000415680 | + | 1 | 19 | 289_359 | 121.33333333333333 | 1017.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000343526 | + | 1 | 19 | 344_347 | 121.33333333333333 | 1051.0 | Compositional bias | Note=Poly-Gln |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000415680 | + | 1 | 19 | 344_347 | 121.33333333333333 | 1017.0 | Compositional bias | Note=Poly-Gln |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000343526 | + | 1 | 19 | 932_987 | 121.33333333333333 | 1051.0 | Domain | Bromo |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000415680 | + | 1 | 19 | 932_987 | 121.33333333333333 | 1017.0 | Domain | Bromo |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000343526 | + | 1 | 19 | 891_907 | 121.33333333333333 | 1051.0 | Motif | Nuclear localization signal |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000415680 | + | 1 | 19 | 891_907 | 121.33333333333333 | 1017.0 | Motif | Nuclear localization signal |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000343526 | + | 1 | 19 | 754_779 | 121.33333333333333 | 1051.0 | Region | Note=Nuclear receptor binding site (NRBS) |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000415680 | + | 1 | 19 | 754_779 | 121.33333333333333 | 1017.0 | Region | Note=Nuclear receptor binding site (NRBS) |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000343526 | + | 1 | 19 | 158_211 | 121.33333333333333 | 1051.0 | Zinc finger | B box-type 1 |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000343526 | + | 1 | 19 | 218_259 | 121.33333333333333 | 1051.0 | Zinc finger | B box-type 2 |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000343526 | + | 1 | 19 | 826_873 | 121.33333333333333 | 1051.0 | Zinc finger | PHD-type |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000415680 | + | 1 | 19 | 158_211 | 121.33333333333333 | 1017.0 | Zinc finger | B box-type 1 |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000415680 | + | 1 | 19 | 218_259 | 121.33333333333333 | 1017.0 | Zinc finger | B box-type 2 |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000415680 | + | 1 | 19 | 826_873 | 121.33333333333333 | 1017.0 | Zinc finger | PHD-type |
Tgene | KIAA1324L | chr7:138145657 | chr7:86577238 | ENST00000450689 | 1 | 22 | 48_929 | 103.33333333333333 | 1030.0 | Topological domain | Extracellular |
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Fusion Gene Sequence for TRIM24-KIAA1324L |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000343526_ENST00000450689_TCGA-44-A479-01A_TRIM24_chr7_138145657_+_KIAA1324L_chr7_86577238_length(transcript)=6924nt_BP=579nt GACAGATACCCTCCTTCCGGCCGCGCCACTCGGGAGGCGGATCCCGTGGGCCTGAGGAGGCTTCCCCCGCCCGGTTTGCTTTCCCTCCCT CGCTGGCGCTGCCGCGAGTCCACCGAGCGGCCTCTGAGGAGCAGCCGCAGGAGGAGGAGGAGGTCGTCGGGGGCGGCGGGCGGAGACCGC GCTCTCGCTTCCCCGGCGGCGGCAAGGGCAGGACAATGGAGGTGGCGGTGGAGAAGGCGGTGGCGGCGGCGGCAGCGGCCTCGGCTGCGG CCTCCGGGGGGCCCTCGGCGGCGCCGAGCGGGGAGAACGAGGCCGAGAGTCGGCAGGGCCCGGACTCGGAGCGCGGCGGCGAGGCGGCCC GGCTCAACCTGTTGGACACTTGCGCCGTGTGCCACCAGAACATCCAGAGCCGGGCGCCCAAGCTGCTGCCCTGCCTGCACTCTTTCTGCC AGCGCTGCCTGCCCGCGCCCCAGCGCTACCTCATGCTGCCCGCGCCCATGCTGGGCTCGGCCGAGACCCCGCCACCCGTCCCTGCCCCCG GCTCGCCGGTCAGCGGCTCGTCGCCGTTCGCCACCCAAGCTTTCTCCTGTGCTTCTGGAGAGTATCTAGAAATGAAGAACCAGGTATGCA GTAAGTGTGGTGAAGGCACCTATTCCTTGGGCAGTGGCATCAAATTTGATGAATGGGATGAATTGCCGGCAGGATTTTCTAACATCGCAA CATTCATGGACACTGTGGTGGGCCCTTCTGACAGCAGGCCAGACGGCTGTAACAACTCTTCTTGGATCCCTCGTGGAAACTACATAGAAT CTAATCGTGATGACTGCACGGTGTCTTTGATCTATGCTGTGCACCTTAAGAAGTCAGGCTATGTCTTCTTTGAGTACCAGTATGTCGACA ACAACATCTTCTTTGAGTTCTTTATTCAAAATGATCAGTGCCAGGAGATGGACACCACCACTGACAAGTGGGTAAAACTTACAGACAATG GAGAATGGGGCTCTCATTCTGTAATGCTGAAATCAGGCACAAACATACTCTACTGGAGAACTACAGGCATCCTTATGGGTTCTAAGGCGG TCAAGCCTGTGCTGGTAAAAAATATCACAATTGAAGGGGTGGCGTACACATCAGAATGTTTTCCTTGCAAGCCAGGCACATTCAGCAACA AACCAGGTTCATTCAACTGCCAGGTGTGTCCCAGAAACACCTATTCTGAGAAAGGAGCCAAAGAATGTATAAGGTGTAAAGACGACTCTC AATTTTCAGAGGAAGGATCCAGTGAGTGTACAGAGCGCCCTCCCTGTACCACAAAAGACTATTTCCAGATCCATACTCCATGTGATGAAG AAGGAAAGACACAGATAATGTACAAGTGGATAGAGCCCAAAATCTGCCGGGAGGATCTCACAGATGCTATTAGATTGCCCCCTTCTGGAG AGAAGAAGGATTGTCCGCCTTGCAACCCTGGATTTTATAACAATGGATCATCTTCTTGCCATCCCTGTCCTCCTGGAACATTTTCAGATG GAACCAAAGAATGTAGACCATGTCCAGCAGGAACGGAGCCTGCACTTGGCTTTGAATATAAATGGTGGAATGTCCTTCCTGGCAACATGA AAACTTCCTGCTTCAATGTTGGGAATTCAAAGTGCGATGGAATGAATGGTTGGGAGGTGGCTGGAGATCATATCCAGAGTGGGGCTGGAG GTTCTGACAATGATTACCTGATCTTAAACTTGCATATCCCAGGATTTAAACCACCAACATCTATGACTGGAGCCACGGGTTCTGAACTAG GAAGAATAACATTTGTCTTTGAGACCCTCTGTTCAGCTGACTGTGTTTTGTACTTCATGGTGGATATTAATAGAAAAAGTACAAATGTGG TAGAATCGTGGGGTGGAACCAAAGAAAAACAAGCTTACACCCATATCATCTTCAAGAATGCAACTTTTACATTTACATGGGCATTCCAGA GAACTAATCAGGGTCAAGATAATAGACGGTTCATCAATGACATGGTGAAGATTTATTCTATCACAGCCACTAATGCAGTTGATGGGGTGG CGTCCTCATGCCGTGCCTGTGCCCTCGGTTCTGAACAGTCGGGTTCATCGTGTGTCCCCTGCCCTCCAGGCCACTACATTGAGAAAGAAA CCAACCAGTGCAAGGAATGTCCACCTGACACCTACCTGTCCATACATCAGGTCTATGGCAAAGAGGCTTGTATTCCATGCGGGCCTGGGA GTAAAAACAATCAGGACCATTCGGTTTGCTATAGTGACTGCTTTTTCTACCATGAAAAAGAAAATCAGAGTTTGCACTATGACTTTAGCA ACCTCAGCAGTGTGGGCTCATTAATGAATGGCCCCAGCTTCACCTCCAAAGGAACAAAATACTTCCATTTCTTCAATATCAGTTTATGTG GGCATGAGGGGAAGAAGATGGCTCTCTGTACCAACAATATAACAGACTTTACAGTAAAAGAAATAGTGGCAGGGTCAGATGATTACACAA ATTTGGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTTCCGAGCAGCCTTATCATCACAATCCATCATTC TGGCAGATACATTCATAGGAGTCACAGTTGAAACCACATTGAAAAATATTAATATAAAAGAAGATATGTTCCCAGTTCCAACAAGCCAAA TACCAGATGTGCATTTCTTTTATAAGTCTTCTACAGCAACAACATCTTGTATTAATGGCCGATCAACTGCTGTGAAAATGAGGTGTAATC CTACTAAATCTGGAGCAGGAGTGATTTCAGTCCCCAGCAAGTGCCCAGCAGGTACCTGTGATGGGTGTACGTTCTATTTCCTGTGGGAGA GTGCTGAAGCTTGCCCTCTGTGTACGGAGCATGACTTCCATGAGATTGAGGGAGCCTGCAAGAGAGGATTTCAGGAAACCTTGTATGTGT GGAATGAACCTAAATGGTGCATTAAAGGAATTTCTTTGCCTGAGAAAAAGTTGGCAACCTGTGAAACGGTTGACTTTTGGCTGAAGGTGG GAGCCGGTGTGGGAGCTTTTACTGCCGTTTTGCTGGTGGCTCTGACCTGCTACTTCTGGAAAAAGAATCAAAAACTGGAATACAAATATT CCAAGTTAGTAATGACGACTAACTCAAAAGAGTGTGAACTCCCGGCTGCAGACAGTTGTGCTATCATGGAAGGAGAAGATAATGAAGAGG AAGTTGTATATTCCAATAAACAGTCACTACTAGGAAAACTCAAATCTTTGGCAACCAAGGAAAAAGAAGACCATTTTGAATCTGTTCAAC TGAAAACCTCAAGATCCCCAAATATATGAAGAGACAGTGCTGTAGCCTTGAGACTAATGAACAAAGAAACCTGCTCTAGTTTTACAGGAC CATATTTTAGGGTCTGTCCTCATACCTGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGATTGAAACATT TGATTGCCTTATCACATGGTCAAGTACCTTGCCAAATAAAGGAAAGCAAATGATTTGGGTCTCAACTGAAGATGAAGCTCAACTCAGGAA GAGATTTATCTGTATATACACATAACTGAAAACCAAGTTTAAGCCCACCAATGCACTGCTGATGCATGCCATATAATTAATGGGTAACTT TTATTCTTTATGATGTCTACATAACAAGTGTGATTTGGAAGGCACATGTGAGCATATGCATTATGATCCAATTTATGTTTTTTCTTTGTT TATATTTTGGGGAAAATTAAAATTTTTTTAAGGTATATTTTTCCCATTATTTATTTTCCTGACCTTAAAACAGCTTTTCTACTAAAAAAT GGTGAGCAATGAAGACAATAAATTTTTCATTTTTCCATAGGTTATCTTCTCTTGATTTAAATTTCAGGAAGAGTTAGCATGTGCTTGGGT TATCTAGATTTATAATTGCCTTTGAAATTCCATCCTCGTTGGAGCTGGTAAGAAGGGCTTGACTGAAAGTTTGAAGGAATCTAAAAAACA AAAAAGTAAGAAAGGTAACGAGAAGCCCTAATTCTCCATTAATGCAAACTAGCTGCTAGTATCATAGAAGTCAAATGACTTAAAACAGTT TATGTAGTGCTAGAAGTATAATTAAAGTAAATAGGAAAGCTTGTCAATCAAATCACTGGCAAAATCATGAAGAAGAGAGTGAGAAGGTTT GTCTATAAGTACAGATGACTGTATGAAATACTGGGGTAATTTCATGGTCTCCAGAAAATGTCAGTGGGACTTTTGTTCTTTGTCAAGCAC CAGAGGTTATATGGTTATTTTTCTGCTGCAAGACTTTGAGGATGTTGACTTTCTCAGAAACTTTTTAAAAAAATAATCCAATAAGGCAGG AATTCAGTTTTGAAAAATTACATATAATTGTATTCATAATAAGAATGTGGTTATTTCATAAGCAGTTATGAAAGAATTATTGTTCTTATT CAAAAGTGATCCAGATAATTGTGATATTTTCTATGGTGGGCTACTGGTATTAGCACGACTTGGATATTATTTGTTGAAGGAAGTATGAAT GAAGTTGGATTTGACCAATTTCGTGTAAACCTTAATTGATTTAAAACTGGGAAAGAGGGGGGTTTCCTGGCCATTGCTGATCTAAGGTGC TCTTATTTGTTTCCAATAAACAGTAATCTTTATAGACCTTAATGCAGATTTAAAAAAATAGTTGTGATTGGCTGAGAGAGGCAGGGCATA TATGTAGGGAAATGATTTGCCCCAAGCATTCCAATGAAGTATGACTTGTAACTTTTGTGTCTGAAGGTGGTGTCTTTATTTTTGTGGAAA ATGGGAGAAAAATGAATAATTGTGTTTATTTGGCTGATTGGTAATACACTAGACCATTCTGTTATTATTGAATGAATGTTTTGTGTATAT CTCTGCTGTTGCACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTCTGGGATTCAGGGAGGGAGTCACTTTGCATAAACCTTTTTTTG CATTTAATTTCTTGAATGTTCTTATAAAGAAGACATTATGTTGGCATTCTTCATTTTTATCCTGCCAACAGAGTGCTTATGAGCATGTCT GCATTTTGATCAAAATTTAAACAGAAGAGTGAAAATACATTTGAAATGAACCCTTTCAGAGGAACCCTGGCAAAGCTGTATAGACTGGAC AGAGTGAGAAAACTTCCACAGCCACCTGTCACCTTTCTCCTCATCTTCCACTGTGTTCAATATGTATGTTCCAAGCCATAGAGATAATTG GGATTTTCTCCCAGGTAGCTTCTTTCTTCTCCTGTCACTGGACTAAAATCTCTGACATGTCAAAAATGCCTTAAATTTTAATGAACTCTC CGAAAATGTAGTTGATATTGGAGAATTTATTTTATTTCTAATTTTAGATATTAAATATATTTTGTCAGCACAGTCCCATCTTTGGGAAGG AGGTGATTTTTTCCCTTGGATTCCAGTGGTTTGTCATTTTATTTCAAGCACTGAAGAAGTATGACAGAAAGAATATTATGGGGAAAATAT TTAGACCAATCCTGGCTATAAAATTTCCTTTAGTTTTATGCCTGGCCTTTGCAAAGCTCAGTGAAATGTTGAAAGGAATAAATTAATCAT GTTTCTGTGACTTTTGATTGACACTTGTTCCTTTTCCCCCCTAAGTGGTAGAAGAAGTTATTTGTTATTTTTCTAAAAGGCACAATTTTG AAGCCTTAACTACTTCATTAAGTCAACTGTTGCCTATAACATCTCTTAGCACTCGTCAAAACGTATTTAAATCAATTTTCCAATGGATGA GAACATGTCTTCTGTGGATAAATTATATTATGTCATTTAACAACATTGAGCATTTTGATATGTGTTCACTGAATTAAAAAACCTGAATTT CATTATTGTTGACTTTTCCCCTCTTTAGTTACTAGTAATCACATCCTTTCTAGGATTAAAAATATTTCATAGTATTTTTGTGTAGATGTC TGTCCTTATTTTCTTCCCAAAGAAAAAAGGTTGTTTAAATTGATTATGTGGAAGAATTACTTGGGTCCAGTCTTTAGCATCTGGGGTCTC CAGGTCCCCAGGTGGGTCATGATTGACTGCTTCTTCAAGACCCATCTTGCCAACTCTCACTTGATGTCTGTCAATAGAACTACTTCCTGT GGCACATGGTTATTTCTAATGGGAGGCTAATGTGTACATAATTTCTCTCTTCCTCATAGAAATAAATTTCTCTGGGGGTTGCTGTGAGAG GATGACTTCATTAGCCATGTTTAAAGTGAGTGTACTGCTCACGTTTATCTTTGTACACTAAGAGTATGTAGAGTTGATCTTCAGAGAAAC TAAACCTCCCTCATATCTATTTATAGTAATCATGAATATGATTGCAGTTGACAGGCCCAACTCCTAAACTGAGTTTGCCCAAAGAAAATG TCCTTAGAGGAGTAAACTTTTAGAAATCTCAACACCCGACTCATTCGTTGGAAGCTAAAATGGAATTCATCTTCATACTAACTGGCTACA GATTATTCTCTTGCTGGATTTTACTTTTATTTTAACATTTTTACATGAGTTCCTTTTAGAATCATAAATGAAAGAAGTAAAACTTTAAGA TGGGAATGAATAATTGAAAAGAGAATTATATTTACTATTATAATTGATATTATTCGCTATTATGATTACACTTGTCTAGATCAGAGCCCA GCAAACATTTTTTTTGTAAAGGGTCAGATAGTACATAGTTTTGGCTTTGCAGGGCATGTGGGCTCTATTGCATTTACTCAACTCTGCCAT >In-frame_ENST00000343526_ENST00000450689_TCGA-44-A479-01A_TRIM24_chr7_138145657_+_KIAA1324L_chr7_86577238_length(amino acids)=1088AA_start in transcript=92_stop in transcript=3358 MALPRVHRAASEEQPQEEEEVVGGGGRRPRSRFPGGGKGRTMEVAVEKAVAAAAAASAAASGGPSAAPSGENEAESRQGPDSERGGEAAR LNLLDTCAVCHQNIQSRAPKLLPCLHSFCQRCLPAPQRYLMLPAPMLGSAETPPPVPAPGSPVSGSSPFATQAFSCASGEYLEMKNQVCS KCGEGTYSLGSGIKFDEWDELPAGFSNIATFMDTVVGPSDSRPDGCNNSSWIPRGNYIESNRDDCTVSLIYAVHLKKSGYVFFEYQYVDN NIFFEFFIQNDQCQEMDTTTDKWVKLTDNGEWGSHSVMLKSGTNILYWRTTGILMGSKAVKPVLVKNITIEGVAYTSECFPCKPGTFSNK PGSFNCQVCPRNTYSEKGAKECIRCKDDSQFSEEGSSECTERPPCTTKDYFQIHTPCDEEGKTQIMYKWIEPKICREDLTDAIRLPPSGE KKDCPPCNPGFYNNGSSSCHPCPPGTFSDGTKECRPCPAGTEPALGFEYKWWNVLPGNMKTSCFNVGNSKCDGMNGWEVAGDHIQSGAGG SDNDYLILNLHIPGFKPPTSMTGATGSELGRITFVFETLCSADCVLYFMVDINRKSTNVVESWGGTKEKQAYTHIIFKNATFTFTWAFQR TNQGQDNRRFINDMVKIYSITATNAVDGVASSCRACALGSEQSGSSCVPCPPGHYIEKETNQCKECPPDTYLSIHQVYGKEACIPCGPGS KNNQDHSVCYSDCFFYHEKENQSLHYDFSNLSSVGSLMNGPSFTSKGTKYFHFFNISLCGHEGKKMALCTNNITDFTVKEIVAGSDDYTN LVGAFVCQSTIIPSESKGFRAALSSQSIILADTFIGVTVETTLKNINIKEDMFPVPTSQIPDVHFFYKSSTATTSCINGRSTAVKMRCNP TKSGAGVISVPSKCPAGTCDGCTFYFLWESAEACPLCTEHDFHEIEGACKRGFQETLYVWNEPKWCIKGISLPEKKLATCETVDFWLKVG AGVGAFTAVLLVALTCYFWKKNQKLEYKYSKLVMTTNSKECELPAADSCAIMEGEDNEEEVVYSNKQSLLGKLKSLATKEKEDHFESVQL -------------------------------------------------------------- >In-frame_ENST00000415680_ENST00000450689_TCGA-44-A479-01A_TRIM24_chr7_138145657_+_KIAA1324L_chr7_86577238_length(transcript)=6823nt_BP=478nt CCGCGAGTCCACCGAGCGGCCTCTGAGGAGCAGCCGCAGGAGGAGGAGGAGGTCGTCGGGGGCGGCGGGCGGAGACCGCGCTCTCGCTTC CCCGGCGGCGGCAAGGGCAGGACAATGGAGGTGGCGGTGGAGAAGGCGGTGGCGGCGGCGGCAGCGGCCTCGGCTGCGGCCTCCGGGGGG CCCTCGGCGGCGCCGAGCGGGGAGAACGAGGCCGAGAGTCGGCAGGGCCCGGACTCGGAGCGCGGCGGCGAGGCGGCCCGGCTCAACCTG TTGGACACTTGCGCCGTGTGCCACCAGAACATCCAGAGCCGGGCGCCCAAGCTGCTGCCCTGCCTGCACTCTTTCTGCCAGCGCTGCCTG CCCGCGCCCCAGCGCTACCTCATGCTGCCCGCGCCCATGCTGGGCTCGGCCGAGACCCCGCCACCCGTCCCTGCCCCCGGCTCGCCGGTC AGCGGCTCGTCGCCGTTCGCCACCCAAGCTTTCTCCTGTGCTTCTGGAGAGTATCTAGAAATGAAGAACCAGGTATGCAGTAAGTGTGGT GAAGGCACCTATTCCTTGGGCAGTGGCATCAAATTTGATGAATGGGATGAATTGCCGGCAGGATTTTCTAACATCGCAACATTCATGGAC ACTGTGGTGGGCCCTTCTGACAGCAGGCCAGACGGCTGTAACAACTCTTCTTGGATCCCTCGTGGAAACTACATAGAATCTAATCGTGAT GACTGCACGGTGTCTTTGATCTATGCTGTGCACCTTAAGAAGTCAGGCTATGTCTTCTTTGAGTACCAGTATGTCGACAACAACATCTTC TTTGAGTTCTTTATTCAAAATGATCAGTGCCAGGAGATGGACACCACCACTGACAAGTGGGTAAAACTTACAGACAATGGAGAATGGGGC TCTCATTCTGTAATGCTGAAATCAGGCACAAACATACTCTACTGGAGAACTACAGGCATCCTTATGGGTTCTAAGGCGGTCAAGCCTGTG CTGGTAAAAAATATCACAATTGAAGGGGTGGCGTACACATCAGAATGTTTTCCTTGCAAGCCAGGCACATTCAGCAACAAACCAGGTTCA TTCAACTGCCAGGTGTGTCCCAGAAACACCTATTCTGAGAAAGGAGCCAAAGAATGTATAAGGTGTAAAGACGACTCTCAATTTTCAGAG GAAGGATCCAGTGAGTGTACAGAGCGCCCTCCCTGTACCACAAAAGACTATTTCCAGATCCATACTCCATGTGATGAAGAAGGAAAGACA CAGATAATGTACAAGTGGATAGAGCCCAAAATCTGCCGGGAGGATCTCACAGATGCTATTAGATTGCCCCCTTCTGGAGAGAAGAAGGAT TGTCCGCCTTGCAACCCTGGATTTTATAACAATGGATCATCTTCTTGCCATCCCTGTCCTCCTGGAACATTTTCAGATGGAACCAAAGAA TGTAGACCATGTCCAGCAGGAACGGAGCCTGCACTTGGCTTTGAATATAAATGGTGGAATGTCCTTCCTGGCAACATGAAAACTTCCTGC TTCAATGTTGGGAATTCAAAGTGCGATGGAATGAATGGTTGGGAGGTGGCTGGAGATCATATCCAGAGTGGGGCTGGAGGTTCTGACAAT GATTACCTGATCTTAAACTTGCATATCCCAGGATTTAAACCACCAACATCTATGACTGGAGCCACGGGTTCTGAACTAGGAAGAATAACA TTTGTCTTTGAGACCCTCTGTTCAGCTGACTGTGTTTTGTACTTCATGGTGGATATTAATAGAAAAAGTACAAATGTGGTAGAATCGTGG GGTGGAACCAAAGAAAAACAAGCTTACACCCATATCATCTTCAAGAATGCAACTTTTACATTTACATGGGCATTCCAGAGAACTAATCAG GGTCAAGATAATAGACGGTTCATCAATGACATGGTGAAGATTTATTCTATCACAGCCACTAATGCAGTTGATGGGGTGGCGTCCTCATGC CGTGCCTGTGCCCTCGGTTCTGAACAGTCGGGTTCATCGTGTGTCCCCTGCCCTCCAGGCCACTACATTGAGAAAGAAACCAACCAGTGC AAGGAATGTCCACCTGACACCTACCTGTCCATACATCAGGTCTATGGCAAAGAGGCTTGTATTCCATGCGGGCCTGGGAGTAAAAACAAT CAGGACCATTCGGTTTGCTATAGTGACTGCTTTTTCTACCATGAAAAAGAAAATCAGAGTTTGCACTATGACTTTAGCAACCTCAGCAGT GTGGGCTCATTAATGAATGGCCCCAGCTTCACCTCCAAAGGAACAAAATACTTCCATTTCTTCAATATCAGTTTATGTGGGCATGAGGGG AAGAAGATGGCTCTCTGTACCAACAATATAACAGACTTTACAGTAAAAGAAATAGTGGCAGGGTCAGATGATTACACAAATTTGGTAGGG GCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTTCCGAGCAGCCTTATCATCACAATCCATCATTCTGGCAGATACA TTCATAGGAGTCACAGTTGAAACCACATTGAAAAATATTAATATAAAAGAAGATATGTTCCCAGTTCCAACAAGCCAAATACCAGATGTG CATTTCTTTTATAAGTCTTCTACAGCAACAACATCTTGTATTAATGGCCGATCAACTGCTGTGAAAATGAGGTGTAATCCTACTAAATCT GGAGCAGGAGTGATTTCAGTCCCCAGCAAGTGCCCAGCAGGTACCTGTGATGGGTGTACGTTCTATTTCCTGTGGGAGAGTGCTGAAGCT TGCCCTCTGTGTACGGAGCATGACTTCCATGAGATTGAGGGAGCCTGCAAGAGAGGATTTCAGGAAACCTTGTATGTGTGGAATGAACCT AAATGGTGCATTAAAGGAATTTCTTTGCCTGAGAAAAAGTTGGCAACCTGTGAAACGGTTGACTTTTGGCTGAAGGTGGGAGCCGGTGTG GGAGCTTTTACTGCCGTTTTGCTGGTGGCTCTGACCTGCTACTTCTGGAAAAAGAATCAAAAACTGGAATACAAATATTCCAAGTTAGTA ATGACGACTAACTCAAAAGAGTGTGAACTCCCGGCTGCAGACAGTTGTGCTATCATGGAAGGAGAAGATAATGAAGAGGAAGTTGTATAT TCCAATAAACAGTCACTACTAGGAAAACTCAAATCTTTGGCAACCAAGGAAAAAGAAGACCATTTTGAATCTGTTCAACTGAAAACCTCA AGATCCCCAAATATATGAAGAGACAGTGCTGTAGCCTTGAGACTAATGAACAAAGAAACCTGCTCTAGTTTTACAGGACCATATTTTAGG GTCTGTCCTCATACCTGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGCTGAAAAGGGAAGGAGATTGAAACATTTGATTGCCTTA TCACATGGTCAAGTACCTTGCCAAATAAAGGAAAGCAAATGATTTGGGTCTCAACTGAAGATGAAGCTCAACTCAGGAAGAGATTTATCT GTATATACACATAACTGAAAACCAAGTTTAAGCCCACCAATGCACTGCTGATGCATGCCATATAATTAATGGGTAACTTTTATTCTTTAT GATGTCTACATAACAAGTGTGATTTGGAAGGCACATGTGAGCATATGCATTATGATCCAATTTATGTTTTTTCTTTGTTTATATTTTGGG GAAAATTAAAATTTTTTTAAGGTATATTTTTCCCATTATTTATTTTCCTGACCTTAAAACAGCTTTTCTACTAAAAAATGGTGAGCAATG AAGACAATAAATTTTTCATTTTTCCATAGGTTATCTTCTCTTGATTTAAATTTCAGGAAGAGTTAGCATGTGCTTGGGTTATCTAGATTT ATAATTGCCTTTGAAATTCCATCCTCGTTGGAGCTGGTAAGAAGGGCTTGACTGAAAGTTTGAAGGAATCTAAAAAACAAAAAAGTAAGA AAGGTAACGAGAAGCCCTAATTCTCCATTAATGCAAACTAGCTGCTAGTATCATAGAAGTCAAATGACTTAAAACAGTTTATGTAGTGCT AGAAGTATAATTAAAGTAAATAGGAAAGCTTGTCAATCAAATCACTGGCAAAATCATGAAGAAGAGAGTGAGAAGGTTTGTCTATAAGTA CAGATGACTGTATGAAATACTGGGGTAATTTCATGGTCTCCAGAAAATGTCAGTGGGACTTTTGTTCTTTGTCAAGCACCAGAGGTTATA TGGTTATTTTTCTGCTGCAAGACTTTGAGGATGTTGACTTTCTCAGAAACTTTTTAAAAAAATAATCCAATAAGGCAGGAATTCAGTTTT GAAAAATTACATATAATTGTATTCATAATAAGAATGTGGTTATTTCATAAGCAGTTATGAAAGAATTATTGTTCTTATTCAAAAGTGATC CAGATAATTGTGATATTTTCTATGGTGGGCTACTGGTATTAGCACGACTTGGATATTATTTGTTGAAGGAAGTATGAATGAAGTTGGATT TGACCAATTTCGTGTAAACCTTAATTGATTTAAAACTGGGAAAGAGGGGGGTTTCCTGGCCATTGCTGATCTAAGGTGCTCTTATTTGTT TCCAATAAACAGTAATCTTTATAGACCTTAATGCAGATTTAAAAAAATAGTTGTGATTGGCTGAGAGAGGCAGGGCATATATGTAGGGAA ATGATTTGCCCCAAGCATTCCAATGAAGTATGACTTGTAACTTTTGTGTCTGAAGGTGGTGTCTTTATTTTTGTGGAAAATGGGAGAAAA ATGAATAATTGTGTTTATTTGGCTGATTGGTAATACACTAGACCATTCTGTTATTATTGAATGAATGTTTTGTGTATATCTCTGCTGTTG CACATATGAGTATAGGTGAGGTTGTCATTGTTTGCTCTGGGATTCAGGGAGGGAGTCACTTTGCATAAACCTTTTTTTGCATTTAATTTC TTGAATGTTCTTATAAAGAAGACATTATGTTGGCATTCTTCATTTTTATCCTGCCAACAGAGTGCTTATGAGCATGTCTGCATTTTGATC AAAATTTAAACAGAAGAGTGAAAATACATTTGAAATGAACCCTTTCAGAGGAACCCTGGCAAAGCTGTATAGACTGGACAGAGTGAGAAA ACTTCCACAGCCACCTGTCACCTTTCTCCTCATCTTCCACTGTGTTCAATATGTATGTTCCAAGCCATAGAGATAATTGGGATTTTCTCC CAGGTAGCTTCTTTCTTCTCCTGTCACTGGACTAAAATCTCTGACATGTCAAAAATGCCTTAAATTTTAATGAACTCTCCGAAAATGTAG TTGATATTGGAGAATTTATTTTATTTCTAATTTTAGATATTAAATATATTTTGTCAGCACAGTCCCATCTTTGGGAAGGAGGTGATTTTT TCCCTTGGATTCCAGTGGTTTGTCATTTTATTTCAAGCACTGAAGAAGTATGACAGAAAGAATATTATGGGGAAAATATTTAGACCAATC CTGGCTATAAAATTTCCTTTAGTTTTATGCCTGGCCTTTGCAAAGCTCAGTGAAATGTTGAAAGGAATAAATTAATCATGTTTCTGTGAC TTTTGATTGACACTTGTTCCTTTTCCCCCCTAAGTGGTAGAAGAAGTTATTTGTTATTTTTCTAAAAGGCACAATTTTGAAGCCTTAACT ACTTCATTAAGTCAACTGTTGCCTATAACATCTCTTAGCACTCGTCAAAACGTATTTAAATCAATTTTCCAATGGATGAGAACATGTCTT CTGTGGATAAATTATATTATGTCATTTAACAACATTGAGCATTTTGATATGTGTTCACTGAATTAAAAAACCTGAATTTCATTATTGTTG ACTTTTCCCCTCTTTAGTTACTAGTAATCACATCCTTTCTAGGATTAAAAATATTTCATAGTATTTTTGTGTAGATGTCTGTCCTTATTT TCTTCCCAAAGAAAAAAGGTTGTTTAAATTGATTATGTGGAAGAATTACTTGGGTCCAGTCTTTAGCATCTGGGGTCTCCAGGTCCCCAG GTGGGTCATGATTGACTGCTTCTTCAAGACCCATCTTGCCAACTCTCACTTGATGTCTGTCAATAGAACTACTTCCTGTGGCACATGGTT ATTTCTAATGGGAGGCTAATGTGTACATAATTTCTCTCTTCCTCATAGAAATAAATTTCTCTGGGGGTTGCTGTGAGAGGATGACTTCAT TAGCCATGTTTAAAGTGAGTGTACTGCTCACGTTTATCTTTGTACACTAAGAGTATGTAGAGTTGATCTTCAGAGAAACTAAACCTCCCT CATATCTATTTATAGTAATCATGAATATGATTGCAGTTGACAGGCCCAACTCCTAAACTGAGTTTGCCCAAAGAAAATGTCCTTAGAGGA GTAAACTTTTAGAAATCTCAACACCCGACTCATTCGTTGGAAGCTAAAATGGAATTCATCTTCATACTAACTGGCTACAGATTATTCTCT TGCTGGATTTTACTTTTATTTTAACATTTTTACATGAGTTCCTTTTAGAATCATAAATGAAAGAAGTAAAACTTTAAGATGGGAATGAAT AATTGAAAAGAGAATTATATTTACTATTATAATTGATATTATTCGCTATTATGATTACACTTGTCTAGATCAGAGCCCAGCAAACATTTT TTTTGTAAAGGGTCAGATAGTACATAGTTTTGGCTTTGCAGGGCATGTGGGCTCTATTGCATTTACTCAACTCTGCCATTGTAGTATGAA >In-frame_ENST00000415680_ENST00000450689_TCGA-44-A479-01A_TRIM24_chr7_138145657_+_KIAA1324L_chr7_86577238_length(amino acids)=1047AA_start in transcript=114_stop in transcript=3257 MEVAVEKAVAAAAAASAAASGGPSAAPSGENEAESRQGPDSERGGEAARLNLLDTCAVCHQNIQSRAPKLLPCLHSFCQRCLPAPQRYLM LPAPMLGSAETPPPVPAPGSPVSGSSPFATQAFSCASGEYLEMKNQVCSKCGEGTYSLGSGIKFDEWDELPAGFSNIATFMDTVVGPSDS RPDGCNNSSWIPRGNYIESNRDDCTVSLIYAVHLKKSGYVFFEYQYVDNNIFFEFFIQNDQCQEMDTTTDKWVKLTDNGEWGSHSVMLKS GTNILYWRTTGILMGSKAVKPVLVKNITIEGVAYTSECFPCKPGTFSNKPGSFNCQVCPRNTYSEKGAKECIRCKDDSQFSEEGSSECTE RPPCTTKDYFQIHTPCDEEGKTQIMYKWIEPKICREDLTDAIRLPPSGEKKDCPPCNPGFYNNGSSSCHPCPPGTFSDGTKECRPCPAGT EPALGFEYKWWNVLPGNMKTSCFNVGNSKCDGMNGWEVAGDHIQSGAGGSDNDYLILNLHIPGFKPPTSMTGATGSELGRITFVFETLCS ADCVLYFMVDINRKSTNVVESWGGTKEKQAYTHIIFKNATFTFTWAFQRTNQGQDNRRFINDMVKIYSITATNAVDGVASSCRACALGSE QSGSSCVPCPPGHYIEKETNQCKECPPDTYLSIHQVYGKEACIPCGPGSKNNQDHSVCYSDCFFYHEKENQSLHYDFSNLSSVGSLMNGP SFTSKGTKYFHFFNISLCGHEGKKMALCTNNITDFTVKEIVAGSDDYTNLVGAFVCQSTIIPSESKGFRAALSSQSIILADTFIGVTVET TLKNINIKEDMFPVPTSQIPDVHFFYKSSTATTSCINGRSTAVKMRCNPTKSGAGVISVPSKCPAGTCDGCTFYFLWESAEACPLCTEHD FHEIEGACKRGFQETLYVWNEPKWCIKGISLPEKKLATCETVDFWLKVGAGVGAFTAVLLVALTCYFWKKNQKLEYKYSKLVMTTNSKEC -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for TRIM24-KIAA1324L |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000343526 | + | 1 | 19 | 834_840 | 121.33333333333333 | 1051.0 | histone H3 that is not methylated at 'Lys-4' (H3K4me0) |
Hgene | TRIM24 | chr7:138145657 | chr7:86577238 | ENST00000415680 | + | 1 | 19 | 834_840 | 121.33333333333333 | 1017.0 | histone H3 that is not methylated at 'Lys-4' (H3K4me0) |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for TRIM24-KIAA1324L |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for TRIM24-KIAA1324L |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | TRIM24 | C0238463 | Papillary thyroid carcinoma | 2 | ORPHANET |
Hgene | TRIM24 | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
Hgene | TRIM24 | C2239176 | Liver carcinoma | 1 | CTD_human |
Hgene | TRIM24 | C3658266 | Prostatic Cancer, Castration-Resistant | 1 | CTD_human |
Hgene | TRIM24 | C3658267 | Prostatic Neoplasms, Castration-Resistant | 1 | CTD_human |