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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
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Fusion gene:TRIM33-CSMD2 (FusionGDB2 ID:93423) |
Fusion Gene Summary for TRIM33-CSMD2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: TRIM33-CSMD2 | Fusion gene ID: 93423 | Hgene | Tgene | Gene symbol | TRIM33 | CSMD2 | Gene ID | 51592 | 114784 |
Gene name | tripartite motif containing 33 | CUB and Sushi multiple domains 2 | |
Synonyms | ECTO|PTC7|RFG7|TF1G|TIF1G|TIF1GAMMA|TIFGAMMA | dJ1007G16.1|dJ1007G16.2|dJ947L8.1 | |
Cytomap | 1p13.2 | 1p35.1 | |
Type of gene | protein-coding | protein-coding | |
Description | E3 ubiquitin-protein ligase TRIM33RET-fused gene 7 proteinRING-type E3 ubiquitin transferase TRIM33TIF1-gammaectodermin homologprotein Rfg7transcriptional intermediary factor 1 gamma | CUB and sushi domain-containing protein 2CUB and Sushi (SCR repeat) domainCUB and sushi multiple domains protein 2 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | Q7Z408 | |
Ensembl transtripts involved in fusion gene | ENST00000358465, ENST00000369543, ENST00000450349, ENST00000476908, | ENST00000373381, ENST00000373380, ENST00000373377, ENST00000373388, ENST00000489419, ENST00000338325, | |
Fusion gene scores | * DoF score | 17 X 18 X 10=3060 | 13 X 12 X 7=1092 |
# samples | 21 | 14 | |
** MAII score | log2(21/3060*10)=-3.86507041991389 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(14/1092*10)=-2.96347412397489 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: TRIM33 [Title/Abstract] AND CSMD2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | TRIM33(114948032)-CSMD2(34128692), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. | TRIM33-CSMD2 seems lost the major protein functional domain in Hgene partner, which is a kinase due to the frame-shifted ORF. TRIM33-CSMD2 seems lost the major protein functional domain in Hgene partner, which is a CGC due to the frame-shifted ORF. TRIM33-CSMD2 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. TRIM33-CSMD2 seems lost the major protein functional domain in Hgene partner, which is a IUPHAR drug target due to the frame-shifted ORF. TRIM33-CSMD2 seems lost the major protein functional domain in Hgene partner, which is a epigenetic factor due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | TRIM33 | GO:0016567 | protein ubiquitination | 19135894 |
Hgene | TRIM33 | GO:0017015 | regulation of transforming growth factor beta receptor signaling pathway | 19135894 |
Hgene | TRIM33 | GO:0030514 | negative regulation of BMP signaling pathway | 19135894 |
Fusion gene breakpoints across TRIM33 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across CSMD2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUSC | TCGA-52-7809-01A | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
ChimerDB4 | LUSC | TCGA-52-7809 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
ChimerDB4 | LUSC | TCGA-52-7809-01A | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
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Fusion Gene ORF analysis for TRIM33-CSMD2 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000358465 | ENST00000373381 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
In-frame | ENST00000358465 | ENST00000373380 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
5CDS-intron | ENST00000358465 | ENST00000373377 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
5CDS-5UTR | ENST00000358465 | ENST00000373388 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
5CDS-intron | ENST00000358465 | ENST00000489419 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
5CDS-intron | ENST00000358465 | ENST00000338325 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
In-frame | ENST00000369543 | ENST00000373381 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
In-frame | ENST00000369543 | ENST00000373380 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
5CDS-intron | ENST00000369543 | ENST00000373377 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
5CDS-5UTR | ENST00000369543 | ENST00000373388 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
5CDS-intron | ENST00000369543 | ENST00000489419 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
5CDS-intron | ENST00000369543 | ENST00000338325 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
Frame-shift | ENST00000450349 | ENST00000373381 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
Frame-shift | ENST00000450349 | ENST00000373380 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
5CDS-intron | ENST00000450349 | ENST00000373377 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
5CDS-5UTR | ENST00000450349 | ENST00000373388 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
5CDS-intron | ENST00000450349 | ENST00000489419 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
5CDS-intron | ENST00000450349 | ENST00000338325 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
intron-3CDS | ENST00000476908 | ENST00000373381 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
intron-3CDS | ENST00000476908 | ENST00000373380 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
intron-intron | ENST00000476908 | ENST00000373377 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
intron-5UTR | ENST00000476908 | ENST00000373388 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
intron-intron | ENST00000476908 | ENST00000489419 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
intron-intron | ENST00000476908 | ENST00000338325 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000358465 | TRIM33 | chr1 | 114948032 | - | ENST00000373381 | CSMD2 | chr1 | 34128692 | - | 12307 | 2852 | 0 | 9695 | 3231 |
ENST00000358465 | TRIM33 | chr1 | 114948032 | - | ENST00000373380 | CSMD2 | chr1 | 34128692 | - | 6339 | 2852 | 0 | 5684 | 1894 |
ENST00000369543 | TRIM33 | chr1 | 114948032 | - | ENST00000373381 | CSMD2 | chr1 | 34128692 | - | 12307 | 2852 | 0 | 9695 | 3231 |
ENST00000369543 | TRIM33 | chr1 | 114948032 | - | ENST00000373380 | CSMD2 | chr1 | 34128692 | - | 6339 | 2852 | 0 | 5684 | 1894 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000358465 | ENST00000373381 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - | 0.001278916 | 0.99872106 |
ENST00000358465 | ENST00000373380 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - | 0.001764776 | 0.9982352 |
ENST00000369543 | ENST00000373381 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - | 0.001278916 | 0.99872106 |
ENST00000369543 | ENST00000373380 | TRIM33 | chr1 | 114948032 | - | CSMD2 | chr1 | 34128692 | - | 0.001764776 | 0.9982352 |
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Fusion Genomic Features for TRIM33-CSMD2 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for TRIM33-CSMD2 |
Go to FGviewer for the breakpoints of chr1:114948032-chr1:34128692 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | CSMD2 |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000358465 | - | 15 | 20 | 299_401 | 922.6666666666666 | 1128.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000369543 | - | 15 | 19 | 299_401 | 922.6666666666666 | 1111.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000358465 | - | 15 | 20 | 13_18 | 922.6666666666666 | 1128.0 | Compositional bias | Note=Poly-Gly |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000358465 | - | 15 | 20 | 44_49 | 922.6666666666666 | 1128.0 | Compositional bias | Note=Poly-Glu |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000358465 | - | 15 | 20 | 545_550 | 922.6666666666666 | 1128.0 | Compositional bias | Note=Poly-Thr |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000369543 | - | 15 | 19 | 13_18 | 922.6666666666666 | 1111.0 | Compositional bias | Note=Poly-Gly |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000369543 | - | 15 | 19 | 44_49 | 922.6666666666666 | 1111.0 | Compositional bias | Note=Poly-Glu |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000369543 | - | 15 | 19 | 545_550 | 922.6666666666666 | 1111.0 | Compositional bias | Note=Poly-Thr |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000358465 | - | 15 | 20 | 1_147 | 922.6666666666666 | 1128.0 | Region | Note=Necessary for E3 ubiquitin-protein ligase activity and repression of SMAD4 signaling and transcriptional repression |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000369543 | - | 15 | 19 | 1_147 | 922.6666666666666 | 1111.0 | Region | Note=Necessary for E3 ubiquitin-protein ligase activity and repression of SMAD4 signaling and transcriptional repression |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000358465 | - | 15 | 20 | 125_154 | 922.6666666666666 | 1128.0 | Zinc finger | RING-type |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000358465 | - | 15 | 20 | 212_259 | 922.6666666666666 | 1128.0 | Zinc finger | B box-type 1 |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000358465 | - | 15 | 20 | 271_312 | 922.6666666666666 | 1128.0 | Zinc finger | B box-type 2 |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000369543 | - | 15 | 19 | 125_154 | 922.6666666666666 | 1111.0 | Zinc finger | RING-type |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000369543 | - | 15 | 19 | 212_259 | 922.6666666666666 | 1111.0 | Zinc finger | B box-type 1 |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000369543 | - | 15 | 19 | 271_312 | 922.6666666666666 | 1111.0 | Zinc finger | B box-type 2 |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 1037_1096 | 223.66666666666666 | 1168.0 | Domain | Sushi 6 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 1098_1206 | 223.66666666666666 | 1168.0 | Domain | CUB 7 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 1209_1269 | 223.66666666666666 | 1168.0 | Domain | Sushi 7 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 1271_1380 | 223.66666666666666 | 1168.0 | Domain | CUB 8 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 1383_1443 | 223.66666666666666 | 1168.0 | Domain | Sushi 8 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 1445_1553 | 223.66666666666666 | 1168.0 | Domain | CUB 9 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 1556_1617 | 223.66666666666666 | 1168.0 | Domain | Sushi 9 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 1619_1727 | 223.66666666666666 | 1168.0 | Domain | CUB 10 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 1733_1794 | 223.66666666666666 | 1168.0 | Domain | Sushi 10 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 1796_1904 | 223.66666666666666 | 1168.0 | Domain | CUB 11 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 1907_1966 | 223.66666666666666 | 1168.0 | Domain | Sushi 11 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 1968_2076 | 223.66666666666666 | 1168.0 | Domain | CUB 12 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 2121_2180 | 223.66666666666666 | 1168.0 | Domain | Sushi 12 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 2182_2293 | 223.66666666666666 | 1168.0 | Domain | CUB 13 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 2292_2353 | 223.66666666666666 | 1168.0 | Domain | Sushi 13 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 2355_2466 | 223.66666666666666 | 1168.0 | Domain | CUB 14 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 2466_2528 | 223.66666666666666 | 1168.0 | Domain | Sushi 14 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 2529_2590 | 223.66666666666666 | 1168.0 | Domain | Sushi 15 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 2591_2655 | 223.66666666666666 | 1168.0 | Domain | Sushi 16 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 2656_2713 | 223.66666666666666 | 1168.0 | Domain | Sushi 17 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 2714_2771 | 223.66666666666666 | 1168.0 | Domain | Sushi 18 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 2772_2829 | 223.66666666666666 | 1168.0 | Domain | Sushi 19 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 2833_2890 | 223.66666666666666 | 1168.0 | Domain | Sushi 20 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 2891_2949 | 223.66666666666666 | 1168.0 | Domain | Sushi 21 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 2950_3009 | 223.66666666666666 | 1168.0 | Domain | Sushi 22 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 3010_3067 | 223.66666666666666 | 1168.0 | Domain | Sushi 23 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 3068_3125 | 223.66666666666666 | 1168.0 | Domain | Sushi 24 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 3129_3187 | 223.66666666666666 | 1168.0 | Domain | Sushi 25 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 3188_3247 | 223.66666666666666 | 1168.0 | Domain | Sushi 26 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 341_402 | 223.66666666666666 | 1168.0 | Domain | Sushi 2 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 405_516 | 223.66666666666666 | 1168.0 | Domain | CUB 3 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 519_576 | 223.66666666666666 | 1168.0 | Domain | Sushi 3 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 578_686 | 223.66666666666666 | 1168.0 | Domain | CUB 4 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 689_750 | 223.66666666666666 | 1168.0 | Domain | Sushi 4 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 752_860 | 223.66666666666666 | 1168.0 | Domain | CUB 5 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 865_922 | 223.66666666666666 | 1168.0 | Domain | Sushi 5 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 924_1034 | 223.66666666666666 | 1168.0 | Domain | CUB 6 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 3430_3487 | 223.66666666666666 | 1168.0 | Topological domain | Cytoplasmic | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 3409_3429 | 223.66666666666666 | 1168.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000358465 | - | 15 | 20 | 974_1046 | 922.6666666666666 | 1128.0 | Domain | Bromo |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000369543 | - | 15 | 19 | 974_1046 | 922.6666666666666 | 1111.0 | Domain | Bromo |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000358465 | - | 15 | 20 | 887_934 | 922.6666666666666 | 1128.0 | Zinc finger | PHD-type |
Hgene | TRIM33 | chr1:114948032 | chr1:34128692 | ENST00000369543 | - | 15 | 19 | 887_934 | 922.6666666666666 | 1111.0 | Zinc finger | PHD-type |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 137_198 | 223.66666666666666 | 1168.0 | Domain | Sushi 1 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 202_306 | 223.66666666666666 | 1168.0 | Domain | CUB 2 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 26_134 | 223.66666666666666 | 1168.0 | Domain | CUB 1 | |
Tgene | CSMD2 | chr1:114948032 | chr1:34128692 | ENST00000373380 | 3 | 24 | 1_3408 | 223.66666666666666 | 1168.0 | Topological domain | Extracellular |
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Fusion Gene Sequence for TRIM33-CSMD2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000358465_ENST00000373381_TCGA-52-7809-01A_TRIM33_chr1_114948032_-_CSMD2_chr1_34128692_length(transcript)=12307nt_BP=2852nt CTGCGGCTGGGGCTGGGGGCGGCGGCGGCGGCGACGCGGGCGGCGGGCGGCGCGGGGCGGTCCGGCGGGTTCAAAGAGGAAAACATGGCG GAAAACAAAGGCGGCGGCGAGGCTGAGAGCGGCGGCGGGGGCAGCGGCAGCGCGCCGGTAACTGCCGGGGCCGCCGGGCCCGCCGCGCAG GAGGCGGAGCCGCCTCTCACCGCGGTGCTGGTGGAGGAGGAGGAGGAGGAAGGCGGCAGGGCCGGCGCTGAGGGCGGCGCGGCCGGGCCC GACGACGGGGGGGTGGCCGCGGCCTCCTCGGGCTCGGCCCAGGCTGCTTCATCTCCTGCGGCCTCAGTGGGCACTGGAGTTGCCGGGGGC GCAGTATCGACGCCGGCTCCAGCTCCAGCCTCGGCTCCCGCTCCGGGTCCCTCGGCAGGGCCGCCTCCTGGACCGCCAGCCTCGCTCCTG GACACCTGCGCCGTGTGTCAGCAGAGCTTGCAGAGCCGGCGTGAGGCGGAGCCCAAGCTGCTGCCCTGTCTTCACTCCTTCTGCCTGCGC TGCCTGCCCGAGCCGGAGCGCCAGCTCAGCGTGCCCATCCCGGGGGGCAGCAACGGCGACATCCAGCAAGTTGGTGTAATACGGTGCCCA GTATGCCGCCAAGAATGCAGACAGATAGACCTTGTGGATAATTATTTTGTGAAAGACACATCTGAAGCTCCTAGCAGTTCTGATGAAAAA TCAGAACAGGTATGTACTAGTTGTGAAGACAATGCAAGTGCAGTTGGCTTTTGTGTAGAATGTGGAGAGTGGCTATGTAAGACATGTATC GAAGCACATCAAAGAGTAAAATTTACTAAAGATCACTTGATCAGGAAGAAAGAAGATGTCTCAGAGTCTGTTGGAGCATCTGGTCAACGC CCTGTTTTCTGCCCTGTACACAAACAAGAACAGTTGAAACTTTTCTGTGAAACATGTGATAGATTGACATGTAGAGACTGTCAGCTATTG GAACACAAAGAACATAGGTATCAGTTTTTGGAAGAAGCTTTTCAAAATCAGAAGGGTGCAATTGAGAATCTACTGGCGAAACTTCTTGAG AAGAAGAATTATGTTCATTTTGCAGCTACTCAGGTGCAGAATAGGATAAAAGAAGTAAATGAGACTAACAAACGAGTAGAACAGGAAATT AAAGTGGCCATTTTCACCCTTATCAATGAAATTAATAAGAAAGGAAAATCTCTCTTACAACAGCTAGAGAATGTTACAAAGGAAAGACAG ATGAAGTTACTACAGCAGCAGAATGACATCACAGGCCTTTCCCGGCAGGTGAAGCATGTTATGAACTTCACAAATTGGGCAATTGCAAGT GGCAGCAGCACAGCACTACTATACAGCAAGCGACTGATTACTTTCCAGTTGCGTCATATTTTGAAAGCACGGTGTGATCCTGTCCCTGCT GCTAATGGAGCAATACGTTTCCATTGTGATCCCACCTTCTGGGCAAAGAATGTAGTCAATTTAGGTAATCTAGTAATAGAGAGTAAACCA GCTCCTGGTTATACTCCTAATGTTGTAGTTGGGCAAGTTCCTCCAGGGACAAACCACATTAGTAAAACCCCTGGACAGATTAACTTAGCA CAGCTTCGACTCCAGCACATGCAACAACAAGTATATGCACAGAAACATCAGCAGTTGCAACAGATGAGGATGCAGCAACCACCAGCACCT GTACCAACTACAACAACAACAACACAACAGCATCCTAGACAAGCAGCCCCTCAGATGTTACAACAACAGCCTCCTCGATTGATCAGTGTG CAAACAATGCAAAGAGGCAACATGAACTGTGGAGCTTTTCAAGCCCATCAGATGAGACTGGCTCAGAATGCTGCCAGAATACCAGGGATA CCCAGGCACAGCGGCCCTCAATATTCCATGATGCAGCCACACCTCCAAAGACAACACTCAAACCCAGGGCATGCTGGACCCTTTCCCGTA GTATCGGTACACAACACCACAATCAACCCAACGAGCCCTACTACAGCAACTATGGCAAATGCAAACCGAGGTCCCACCAGCCCATCTGTT ACAGCAATAGAGCTAATCCCCTCAGTTACCAATCCAGAAAACCTTCCATCGCTGCCAGATATTCCACCCATACAGTTGGAAGATGCTGGC TCAAGTAGTTTAGATAATCTACTAAGTAGATACATCTCAGGCAGTCACCTACCCCCACAGCCTACAAGCACCATGAATCCTTCTCCAGGT CCCTCTGCCCTTTCTCCGGGATCATCAGGTTTATCCAATTCTCACACACCTGTGAGACCCCCAAGTACTTCTAGTACTGGCAGTCGAGGC AGCTGTGGGTCATCAGGAAGAACTGCTGAGAAGACAAGTCTTAGTTTCAAATCTGATCAGGTGAAGGTCAAGCAAGAACCTGGGACTGAA GATGAAATATGTAGCTTTTCAGGAGGTGTAAAACAAGAAAAAACAGAGGATGGCAGGAGGAGTGCTTGCATGTTGAGCAGTCCTGAGAGT AGCTTGACACCACCTCTCTCAACCAACCTGCATCTAGAAAGTGAATTGGATGCATTGGCAAGCCTGGAAAACCATGTGAAAATTGAACCT GCAGATATGAATGAAAGCTGCAAACAGTCAGGGCTCAGCAGCCTTGTTAATGGAAAGTCCCCAATTCGAAGCCTCATGCACAGGTCGGCA AGGATTGGAGGAGATGGCAACAATAAAGATGATGACCCAAATGAAGACTGGTGTGCTGTCTGCCAAAACGGAGGAGATCTCTTGTGCTGC GAAAAATGTCCAAAGGTCTTTCATCTAACTTGTCATGTTCCAACACTACTTAGCTTTCCAAGGCTACACTTCCTGGTGTTTGACACAGAG GAGGTTCACGACGTGCTGCGCATCTGGGATGGGCCTGTGGAGAGCGGGGTTCTGCTGAAGGAGCTGAGTGGCCCGGCCCTGCCCAAGGAC CTGCATAGCACCTTCAACTCGGTCGTCCTGCAGTTCAGCACTGACTTCTTCACCAGCAAGCAGGGCTTTGCCATTCAATTTTCAGTGTCC ACAGCAACGTCCTGCAATGACCCTGGGATCCCGCAGAATGGGAGTCGGAGTGGTGACAGTTGGGAAGCCGGCGACTCCACAGTGTTCCAG TGTGACCCTGGCTACGCGCTGCAGGGAAGTGCAGAGATCAGCTGTGTGAAGATCGAGAACAGGTTCTTCTGGCAGCCCAGCCCGCCAACA TGCATCGCTCCCTGCGGGGGAGACCTGACAGGACCATCTGGAGTCATCCTCTCACCAAATTACCCAGAACCCTACCCGCCAGGCAAGGAG TGTGACTGGAAAGTGACCGTCTCACCAGACTACGTCATCGCCCTGGTATTTAACATCTTTAACCTGGAGCCTGGCTATGACTTCCTCCAT ATCTACGACGGACGGGACTCTCTCAGCCCTCTCATAGGAAGCTTCTATGGCTCCCAGCTCCCAGGCCGCATTGAAAGCAGCAGCAACAGC CTCTTCCTCGCCTTCCGCAGCGATGCATCTGTGAGCAATGCTGGCTTCGTCATTGACTATACAGAAAACCCGCGGGAGTCATGTTTTGAT CCTGGTTCCATCAAGAACGGCACACGGGTGGGGTCCGACCTGAAGCTGGGCTCCTCCGTCACCTACTACTGCCACGGGGGCTACGAAGTT GAGGGCACCTCGACCCTGAGCTGCATCCTGGGGCCTGATGGGAAGCCCGTGTGGAACAATCCCCGGCCAGTCTGCACAGCCCCCTGTGGG GGACAGTATGTGGGTTCGGACGGAGTGGTCTTGTCCCCCAACTACCCCCAGAACTACACCAGTGGACAGATCTGCTTGTATTTTGTTACT GTGCCCAAGGACTATGTGGTGTTTGGCCAGTTCGCCTTCTTTCACACGGCCCTCAACGACGTGGTGGAGGTTCACGACGGCCACAGCCAG CACTCGCGGCTCCTCAGCTCCCTCTCGGGCTCCCATACAGGAGAATCACTGCCCTTGGCCACCTCCAATCAAGTTCTCATTAAGTTCAGC GCCAAAGGCCTCGCACCAGCCAGAGGCTTCCACTTTGTCTACCAAGCGGTTCCTCGAACCAGCGCCACGCAGTGCAGCTCTGTGCCGGAA CCCCGCTATGGCAAGAGGCTGGGCAGTGACTTCTCGGTGGGGGCCATCGTCCGCTTCGAATGCAACTCCGGCTATGCCCTGCAGGGGTCG CCAGAGATCGAGTGCCTCCCTGTGCCTGGGGCCTTGGCCCAATGGAATGTCTCAGCGCCCACGTGTGTGGTGCCGTGTGGAGGCAACCTC ACAGAGCGCAGGGGCACCATCCTGTCCCCTGGCTTCCCAGAGCCGTACCTCAACAGCCTCAACTGTGTGTGGAAGATCGTGGTCCCCGAA GGCGCTGGCATCCAGATCCAAGTTGTCAGTTTTGTGACAGAGCAGAACTGGGACTCGCTGGAAGTATTTGATGGTGCAGATAACACTGTA ACCATGCTGGGGAGTTTCTCAGGAACAACCGTGCCTGCCCTTCTGAACAGCACCTCCAACCAGCTCTACCTTCATTTCTACTCAGATATC AGCGTATCTGCAGCTGGCTTCCACTTGGAGTACAAAACGGTGGGCCTGAGCAGTTGTCCGGAACCTGCTGTGCCCAGTAACGGGGTGAAG ACTGGCGAGCGCTACTTGGTGAATGATGTGGTGTCTTTCCAGTGTGAGCCGGGATATGCCCTCCAGGGCCACGCCCACATCTCCTGCATG CCCGGAACAGTGCGGCGATGGAACTACCCTCCTCCACTCTGTATTGCACAGTGTGGGGGAACAGTGGAGGAGATGGAGGGGGTGATCCTG AGCCCCGGCTTCCCAGGCAACTACCCCAGTAACATGGACTGCTCCTGGAAAATAGCACTGCCCGTGGGCTTTGGAGCTCACATCCAGTTC CTGAACTTCTCCACCGAGCCCAACCACGACTACATAGAAATCCGGAATGGCCCCTATGAGACCAGCCGCATGATGGGAAGATTCAGTGGA AGCGAGCTTCCAAGCTCCCTCCTCTCCACGTCCCACGAGACCACCGTGTATTTCCACAGCGACCACTCCCAGAATCGGCCAGGATTCAAG CTGGAGTATCAGGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTGGCTACAACGTGGGA CAATCAGTGACCTTCGAGTGCCTCCCGGGGTATCAATTGACTGGCCACCCTGTCCTCACGTGTCAACATGGCACCAACCGGAACTGGGAC CACCCCCTGCCCAAGTGTGAAGTCCCTTGTGGCGGGAACATCACTTCTTCCAACGGCACTGTGTACTCCCCGGGGTTCCCTAGCCCGTAC TCCAGCTCCCAGGACTGTGTCTGGCTGATCACCGTGCCCATTGGCCATGGCGTCCGCCTCAACCTCAGCCTGCTGCAGACAGAGCCCTCT GGAGATTTCATCACCATCTGGGATGGGCCACAGCAAACAGCACCACGGCTCGGCGTCTTCACCCGGAGCATGGCCAAGAAAACAGTGCAG AGTTCATCCAACCAGGTCCTGCTCAAGTTCCACCGTGATGCAGCCACAGGGGGGATCTTCGCCATAGCTTTCTCCGCTTATCCACTCACC AAATGCCCTCCTCCCACCATCCTCCCCAACGCCGAAGTCGTCACAGAGAATGAAGAATTCAATATAGGTGACATCGTACGCTACAGATGC CTCCCTGGCTTTACCTTAGTGGGGAATGAAATTCTGACCTGCAAACTTGGAACCTACCTGCAGTTTGAAGGACCACCCCCGATATGTGAA GTGCACTGTCCAACAAATGAGCTTCTGACAGACTCCACAGGCGTGATCCTGAGCCAGAGCTACCCTGGAAGCTATCCCCAGTTCCAGACC TGCTCTTGGCTGGTGAGAGTGGAGCCCGACTATAACATCTCCCTCACAGTGGAGTACTTCCTCAGCGAGAAGCAATATGATGAGTTTGAG ATTTTTGATGGTCCATCAGGACAGAGTCCTCTGCTGAAAGCCCTCAGTGGGAATTACTCAGCTCCCCTGATTGTCACCAGCTCAAGCAAC TCTGTGTACCTGCGTTGGTCATCTGATCACGCCTACAATCGGAAGGGCTTCAAGATCCGCTATTCAGCCCCTTACTGCAGCCTGCCCAGG GCTCCACTCCATGGCTTCATCCTAGGCCAGACCAGCACCCAGCCCGGGGGCTCCATCCACTTTGGCTGCAACGCCGGCTACCGCCTGGTG GGACACAGCATGGCCATCTGTACCCGGCACCCCCAGGGCTACCACCTGTGGAGCGAAGCCATCCCTCTCTGTCAAGCTCTTTCCTGTGGG CTTCCTGAGGCCCCCAAGAATGGAATGGTGTTTGGCAAGGAGTACACAGTGGGAACCAAGGCCATGTACAGCTGCAGTGAAGGCTACCAC CTCCAGGCAGGCGCTGAGGCCACTGCAGAGTGTCTGGACACAGGCCTATGGAGCAACCGCAATGTCCCACCACAGTGTGTCCCTGTGACT TGTCCTGATGTCAGTAGCATCAGCGTGGAGCATGGCCGATGGAGGCTTATCTTTGAGACACAGTATCAGTTCCAGGCCCAGCTGATGCTC ATCTGTGACCCTGGCTACTACTATACTGGCCAAAGGGTCATCCGCTGTCAGGCCAATGGCAAATGGAGCCTCGGGGACTCTACGCCCACC TGCCGAATCATCTCCTGTGGAGAGCTCCCGATTCCCCCCAATGGCCACCGCATCGGAACACTGTCTGTCTACGGGGCAACAGCCATCTTC TCCTGCAATTCCGGATACACACTGGTGGGCTCCAGGGTGCGTGAGTGCATGGCCAATGGGCTCTGGAGTGGCTCTGAAGTCCGCTGCCTT GCCACTCAGACCAAGCTCCACTCCATTTTCTATAAGCTCCTCTTCGATGTACTCTCTTCCCCATCCCTCACCAAAGCTGGACACTGTGGG ACTCCTGAGCCCATTGTCAACGGACACATCAATGGGGAGAACTACAGCTACCGGGGCAGTGTGGTGTACCAATGCAATGCTGGCTTCCGC CTGATCGGCATGTCTGTGCGCATCTGCCAGCAGGATCATCACTGGTCGGGCAAGACCCCTTTCTGTGTGCCAATTACCTGTGGACACCCA GGCAACCCTGTCAACGGCCTCACTCAGGGTAACCAGTTTAACCTCAACGATGTGGTCAAGTTTGTTTGCAACCCTGGGTATATGGCTGAG GGGGCTGCTAGGTCCCAATGCCTGGCCAGCGGGCAATGGAGTGACATGCTGCCCACCTGCAGAATCATCAACTGTACAGATCCTGGACAC CAAGAAAATAGTGTTCGTCAGGTCCACGCCAGCGGCCCGCACAGGTTCAGCTTCGGCACCACTGTGTCTTACCGGTGCAACCACGGCTTC TACCTCCTGGGCACCCCAGTGCTCAGCTGCCAGGGAGATGGCACATGGGACCGTCCCCGCCCCCAGTGTCTCTTGGTGTCCTGTGGCCAT CCGGGCTCCCCGCCTCACTCCCAGATGTCTGGAGACAGTTATACTGTGGGAGCAGTGGTGCGGTACAGCTGCATCGGCAAGCGTACTCTG GTGGGAAACAGCACCCGCATGTGTGGGCTGGATGGACACTGGACTGGCTCCCTCCCTCACTGCTCAGGAACCAGCGTGGGAGTTTGCGGT GACCCTGGGATCCCGGCTCATGGCATCCGTTTGGGGGACAGCTTTGATCCAGGCACTGTGATGCGCTTCAGCTGTGAAGCTGGCCACGTG CTCCGGGGATCGTCAGAGCGCACCTGTCAAGCCAATGGCTCGTGGAGCGGCTCGCAGCCTGAGTGTGGAGTGATCTCTTGTGGGAACCCT GGGACTCCAAGTAATGCCCGAGTTGTGTTCAGTGATGGCCTGGTTTTCTCCAGCTCTATCGTCTATGAGTGCCGGGAAGGATACTACGCC ACAGGCCTGCTCAGCCGTCACTGCTCGGTCAATGGTACCTGGACAGGCAGTGACCCTGAGTGCCTCGTCATAAACTGTGGTGACCCTGGG ATTCCAGCCAATGGCCTTCGGCTGGGCAATGACTTCAGGTACAACAAAACTGTGACATATCAGTGTGTCCCTGGCTATATGATGGAGTCA CATAGAGTATCTGTGCTGAGCTGCACCAAGGACCGGACATGGAATGGAACCAAGCCCGTCTGCAAAGCTCTCATGTGCAAGCCACCTCCG CTCATCCCCAATGGGAAGGTGGTGGGGTCTGACTTCATGTGGGGCTCAAGTGTGACTTATGCCTGCCTGGAGGGGTACCAGCTCTCCCTG CCCGCGGTGTTCACCTGTGAGGGAAATGGGTCCTGGACCGGAGAGCTGCCTCAGTGTTTCCCTGTGTTCTGCGGGGATCCTGGTGTCCCG TCCCGTGGGAGGAGAGAGGACCGAGGCTTCTCCTACAGGTCATCTGTCTCCTTCTCCTGCCATCCCCCTCTGGTGCTGGTGGGCTCTCCA CGCAGGTTTTGCCAGTCAGATGGGACATGGAGTGGCACCCAGCCCAGCTGCATAGATCCGACCCTGACCACGTGTGCGGACCCTGGTGTG CCACAGTTTGGGATACAGAACAATTCTCAGGGCTACCAGGTTGGAAGCACAGTCCTCTTCCGTTGTCAAAAAGGCTACCTGCTTCAGGGC TCCACCACCAGGACCTGCCTCCCAAACCTGACCTGGAGTGGAACCCCACCTGACTGTGTCCCCCACCACTGCAGGCAGCCAGAGACGCCA ACGCATGCCAACGTCGGGGCCCTGGATTTGCCCTCCATGGGCTACACGCTCATCTACTCCTGCCAGGAGGGCTTCTCCCTCAAGGGTGGC TCCGAGCACCGCACCTGCAAGGCGGATGGCAGCTGGACAGGCAAGCCGCCCATCTGCCTGGAGGTCCGGCCCAGTGGGAGACCCATCAAC ACTGCCCGGGAGCCACCGCTCACCCAAGCCTTGATTCCTGGGGATGTTTTTGCCAAGAATTCCCTGTGGAAAGGGGCCTATGAATACCAG GGGAAGAAGCAGCCAGCCATGCTCAGAGTGACTGGCTTCCAAGTTGCCAACAGCAAGGTCAATGCCACCATGATCGACCACAGTGGCGTG GAGCTGCACTTGGCTGGAACTTACAAGAAAGAAGATTTTCATCTCCTACTCCAGGTGTACCAGATTACAGGGCCTGTGGAGATCTTTATG AATAAGTTCAAAGATGATCACTGGGCTTTAGATGGCCATGTCTCGTCAGAGTCCTCCGGAGCCACCTTCATCTACCAAGGCTCTGTCAAG GGCCAAGGCTTTGGGCAGTTCGGCTTTCAAAGACTGGACCTCAGGCTGCTGGAGTCAGACCCCGAGTCCATTGGCCGCCACTTTGCTTCC AACAGCAGCTCAGTGGCAGCCGCGATCCTGGTGCCTTTCATCGCCCTCATTATTGCGGGCTTCGTGCTCTATCTCTACAAGCACAGGAGA AGACCCAAAGTTCCTTTCAATGGCTATGCTGGCCACGAGAACACCAATGTTCGGGCCACATTTGAGAACCCAATGTACGACCGCAACATC CAGCCCACAGACATCATGGCCAGCGAGGCGGAGTTCACAGTCAGCACAGTGTGCACAGCAGTATAGCCACCCGGCCTGGCCGCCACCACC GCCACCGAGAGCCCCGCCTCCAGCAGCCGTTCCCCAGGGGGCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCG TCTCCTTGCCTGTGTCTGCTACTGCTGGGACTCAGGCCCTCGCCCTGCCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGT CCTGAAAAGGCAGAAAAGGAAGAGGGGCTGCAGACAGAGGAAGAAAGTTTATGGATTTAAAATAGCAAAGCAACTTGTGGATCTGTGTGT GTGTGTGTGTGTATGGGCCTGATCACACACAAACACACACACCTCTCCTTCATTCACGTCCTATGGAAGAGACCATAAAGGCTTCAAAAC TAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGGGGGAGGTACGGTCAGCTTTCAAAACAATA TGCCCCCCGCCCATCCCATGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATGCGGTCAGAGTGCAGAAAC CCGGTCAGCGTGCAGAAACCAGCTGTCTGCTGATGAACGGCCCATCTGCACAGCGGCAGCAAGGATTACCCCAAGGGCAGGAAAAAAGTC TTTGGAAATAGATTGAAAATCAGTTTCTTTATTTTTTTCAAACACTGTTTTATTGAGTTCTAAACCCAGTGGATTAAAAAGTCATTTGGG TCCTGGGAAGCACTGGGAAAGAAGGGAGAGCCGGGGAGGATAGGGCAGGAGTCTGGCCAGGAGCCCAAGGTCAAGTCTGGCTGTCAACTG ACAAAGAGAAGAGAAGACAAGTCTGTGGCCCAGACAGGATGCCAAGTCTGGGGGCAGCAGCAGGGTCCTTGAGAGAACAGGGGAGCAAGC CTGCCCCAGTACCCAAAAAACAATGGCTATCATGTACTGGGGTTATTCTCTGTGCCTGACACTTTACCTGTAGTATTTCTAGTCTGCACA ATAACACCAAAATGTAGGATTTGTTATTCCCCTTTGACAGATGAGAAAACAGAAGCCTGCAAAGGTAAAGACAGAGTTAGGAAGTGTGGA GTCAGAATGCAAACCCAGATCAGTCTGCCCCAAAGTCCACTACACCAGCTGCCAGAAACCCTGTTCTAGAAGGGGCAGCTAAGAAGGGAG GAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTGGAAAGCCAGGCAAGACACCTGTGTGTCCTATCTGGGTTCTGCTGTCTCCG CGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCTCCCAGCAGCCGCTGACCATAGCC AGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAAAGTCACACCTCTCCAGCTCCTTGCGAGTGGGTTTGATTGATTT TGACAGCTATATCATGCTTGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG GCCACTTTCTCTGTCCTCGGGAAGGCCCCCACAAGCTTAAGCCCCTGTATACGTGTGACATGCTGGCCTCAGAGATTCATGTCACATATT GAAATAGCAAATAGAAATGTGCAGGAGCGGAGGGACAGCGACACCTGGTTCTTAAGCAAATTCTAGATTGGAACAATTAGAAGATCTGAC TGATGTTAAGAGTGGCCAGAGGAAAGTGAGAGGCGTCCATTTCCAGCAGACACAATGGAGGCTGACAGAGGCAGGAGCCTACCCCTGGCC ACACCACCTCTGGGACACGGCACCCCCCTGGGCCTGGAGGGAGAGGGCCAATCCAGACACACTCACACTCTCATCTCTTTCCTTGGCTGG AAACAAGTGCAGGAAGCTCCCCTCCCAATTTCTTATGCTCCCTTCCCCCTTACACTCCTCTCCTTCGACTGCTCCCTTCCCCCTTCTTAT GCCCCTCTCAGACCACCCAGCGGATGCCTATTCCCGCCCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAG CACCTGCTGGTGGGGCACCCAGCACTCTGCTGGGCATCACCCTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAAC AGGGCAGATGAGGCCCTTCACCCACCATCTACGCCATATACCCATCACCATCCCATGAGGAAAAAAAAAAAAGTAAAACAAAGACAAAAA AAATCTTTTGTACAGAGATATATTTTTATTATACAAAGTTTGTACAGTACCAAAAAAGAAAAAAAAAAAGGTGTAAATTTTTTTTTCATT ATTGTAGGTAAACGGTAGTGGAAGCCTTTTTTGTAAATGTAATAAAATGTATAAATATGGTTTTCAGAAAACATCAAGTGCTGTAAATAT GTAATCTACACACCTTCTTGGCTTGTCTGCAGTATATACATTTAATTTATCTGTCTCTGTATATGAGGCTTCCCCCTGGGGTCCTGCATT >In-frame_ENST00000358465_ENST00000373381_TCGA-52-7809-01A_TRIM33_chr1_114948032_-_CSMD2_chr1_34128692_length(amino acids)=3231AA_start in transcript=0_stop in transcript=9695 LRLGLGAAAAATRAAGGAGRSGGFKEENMAENKGGGEAESGGGGSGSAPVTAGAAGPAAQEAEPPLTAVLVEEEEEEGGRAGAEGGAAGP DDGGVAAASSGSAQAASSPAASVGTGVAGGAVSTPAPAPASAPAPGPSAGPPPGPPASLLDTCAVCQQSLQSRREAEPKLLPCLHSFCLR CLPEPERQLSVPIPGGSNGDIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSEAPSSSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCI EAHQRVKFTKDHLIRKKEDVSESVGASGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKLLE KKNYVHFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSLLQQLENVTKERQMKLLQQQNDITGLSRQVKHVMNFTNWAIAS GSSTALLYSKRLITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPGYTPNVVVGQVPPGTNHISKTPGQINLA QLRLQHMQQQVYAQKHQQLQQMRMQQPPAPVPTTTTTTQQHPRQAAPQMLQQQPPRLISVQTMQRGNMNCGAFQAHQMRLAQNAARIPGI PRHSGPQYSMMQPHLQRQHSNPGHAGPFPVVSVHNTTINPTSPTTATMANANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLEDAG SSSLDNLLSRYISGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQVKVKQEPGTE DEICSFSGGVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDALASLENHVKIEPADMNESCKQSGLSSLVNGKSPIRSLMHRSA RIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPRLHFLVFDTEEVHDVLRIWDGPVESGVLLKELSGPALPKD LHSTFNSVVLQFSTDFFTSKQGFAIQFSVSTATSCNDPGIPQNGSRSGDSWEAGDSTVFQCDPGYALQGSAEISCVKIENRFFWQPSPPT CIAPCGGDLTGPSGVILSPNYPEPYPPGKECDWKVTVSPDYVIALVFNIFNLEPGYDFLHIYDGRDSLSPLIGSFYGSQLPGRIESSSNS LFLAFRSDASVSNAGFVIDYTENPRESCFDPGSIKNGTRVGSDLKLGSSVTYYCHGGYEVEGTSTLSCILGPDGKPVWNNPRPVCTAPCG GQYVGSDGVVLSPNYPQNYTSGQICLYFVTVPKDYVVFGQFAFFHTALNDVVEVHDGHSQHSRLLSSLSGSHTGESLPLATSNQVLIKFS AKGLAPARGFHFVYQAVPRTSATQCSSVPEPRYGKRLGSDFSVGAIVRFECNSGYALQGSPEIECLPVPGALAQWNVSAPTCVVPCGGNL TERRGTILSPGFPEPYLNSLNCVWKIVVPEGAGIQIQVVSFVTEQNWDSLEVFDGADNTVTMLGSFSGTTVPALLNSTSNQLYLHFYSDI SVSAAGFHLEYKTVGLSSCPEPAVPSNGVKTGERYLVNDVVSFQCEPGYALQGHAHISCMPGTVRRWNYPPPLCIAQCGGTVEEMEGVIL SPGFPGNYPSNMDCSWKIALPVGFGAHIQFLNFSTEPNHDYIEIRNGPYETSRMMGRFSGSELPSSLLSTSHETTVYFHSDHSQNRPGFK LEYQAYELQECPDPEPFANGIVRGAGYNVGQSVTFECLPGYQLTGHPVLTCQHGTNRNWDHPLPKCEVPCGGNITSSNGTVYSPGFPSPY SSSQDCVWLITVPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFHRDAATGGIFAIAFSAYPLT KCPPPTILPNAEVVTENEEFNIGDIVRYRCLPGFTLVGNEILTCKLGTYLQFEGPPPICEVHCPTNELLTDSTGVILSQSYPGSYPQFQT CSWLVRVEPDYNISLTVEYFLSEKQYDEFEIFDGPSGQSPLLKALSGNYSAPLIVTSSSNSVYLRWSSDHAYNRKGFKIRYSAPYCSLPR APLHGFILGQTSTQPGGSIHFGCNAGYRLVGHSMAICTRHPQGYHLWSEAIPLCQALSCGLPEAPKNGMVFGKEYTVGTKAMYSCSEGYH LQAGAEATAECLDTGLWSNRNVPPQCVPVTCPDVSSISVEHGRWRLIFETQYQFQAQLMLICDPGYYYTGQRVIRCQANGKWSLGDSTPT CRIISCGELPIPPNGHRIGTLSVYGATAIFSCNSGYTLVGSRVRECMANGLWSGSEVRCLATQTKLHSIFYKLLFDVLSSPSLTKAGHCG TPEPIVNGHINGENYSYRGSVVYQCNAGFRLIGMSVRICQQDHHWSGKTPFCVPITCGHPGNPVNGLTQGNQFNLNDVVKFVCNPGYMAE GAARSQCLASGQWSDMLPTCRIINCTDPGHQENSVRQVHASGPHRFSFGTTVSYRCNHGFYLLGTPVLSCQGDGTWDRPRPQCLLVSCGH PGSPPHSQMSGDSYTVGAVVRYSCIGKRTLVGNSTRMCGLDGHWTGSLPHCSGTSVGVCGDPGIPAHGIRLGDSFDPGTVMRFSCEAGHV LRGSSERTCQANGSWSGSQPECGVISCGNPGTPSNARVVFSDGLVFSSSIVYECREGYYATGLLSRHCSVNGTWTGSDPECLVINCGDPG IPANGLRLGNDFRYNKTVTYQCVPGYMMESHRVSVLSCTKDRTWNGTKPVCKALMCKPPPLIPNGKVVGSDFMWGSSVTYACLEGYQLSL PAVFTCEGNGSWTGELPQCFPVFCGDPGVPSRGRREDRGFSYRSSVSFSCHPPLVLVGSPRRFCQSDGTWSGTQPSCIDPTLTTCADPGV PQFGIQNNSQGYQVGSTVLFRCQKGYLLQGSTTRTCLPNLTWSGTPPDCVPHHCRQPETPTHANVGALDLPSMGYTLIYSCQEGFSLKGG SEHRTCKADGSWTGKPPICLEVRPSGRPINTAREPPLTQALIPGDVFAKNSLWKGAYEYQGKKQPAMLRVTGFQVANSKVNATMIDHSGV ELHLAGTYKKEDFHLLLQVYQITGPVEIFMNKFKDDHWALDGHVSSESSGATFIYQGSVKGQGFGQFGFQRLDLRLLESDPESIGRHFAS -------------------------------------------------------------- >In-frame_ENST00000358465_ENST00000373380_TCGA-52-7809-01A_TRIM33_chr1_114948032_-_CSMD2_chr1_34128692_length(transcript)=6339nt_BP=2852nt CTGCGGCTGGGGCTGGGGGCGGCGGCGGCGGCGACGCGGGCGGCGGGCGGCGCGGGGCGGTCCGGCGGGTTCAAAGAGGAAAACATGGCG GAAAACAAAGGCGGCGGCGAGGCTGAGAGCGGCGGCGGGGGCAGCGGCAGCGCGCCGGTAACTGCCGGGGCCGCCGGGCCCGCCGCGCAG GAGGCGGAGCCGCCTCTCACCGCGGTGCTGGTGGAGGAGGAGGAGGAGGAAGGCGGCAGGGCCGGCGCTGAGGGCGGCGCGGCCGGGCCC GACGACGGGGGGGTGGCCGCGGCCTCCTCGGGCTCGGCCCAGGCTGCTTCATCTCCTGCGGCCTCAGTGGGCACTGGAGTTGCCGGGGGC GCAGTATCGACGCCGGCTCCAGCTCCAGCCTCGGCTCCCGCTCCGGGTCCCTCGGCAGGGCCGCCTCCTGGACCGCCAGCCTCGCTCCTG GACACCTGCGCCGTGTGTCAGCAGAGCTTGCAGAGCCGGCGTGAGGCGGAGCCCAAGCTGCTGCCCTGTCTTCACTCCTTCTGCCTGCGC TGCCTGCCCGAGCCGGAGCGCCAGCTCAGCGTGCCCATCCCGGGGGGCAGCAACGGCGACATCCAGCAAGTTGGTGTAATACGGTGCCCA GTATGCCGCCAAGAATGCAGACAGATAGACCTTGTGGATAATTATTTTGTGAAAGACACATCTGAAGCTCCTAGCAGTTCTGATGAAAAA TCAGAACAGGTATGTACTAGTTGTGAAGACAATGCAAGTGCAGTTGGCTTTTGTGTAGAATGTGGAGAGTGGCTATGTAAGACATGTATC GAAGCACATCAAAGAGTAAAATTTACTAAAGATCACTTGATCAGGAAGAAAGAAGATGTCTCAGAGTCTGTTGGAGCATCTGGTCAACGC CCTGTTTTCTGCCCTGTACACAAACAAGAACAGTTGAAACTTTTCTGTGAAACATGTGATAGATTGACATGTAGAGACTGTCAGCTATTG GAACACAAAGAACATAGGTATCAGTTTTTGGAAGAAGCTTTTCAAAATCAGAAGGGTGCAATTGAGAATCTACTGGCGAAACTTCTTGAG AAGAAGAATTATGTTCATTTTGCAGCTACTCAGGTGCAGAATAGGATAAAAGAAGTAAATGAGACTAACAAACGAGTAGAACAGGAAATT AAAGTGGCCATTTTCACCCTTATCAATGAAATTAATAAGAAAGGAAAATCTCTCTTACAACAGCTAGAGAATGTTACAAAGGAAAGACAG ATGAAGTTACTACAGCAGCAGAATGACATCACAGGCCTTTCCCGGCAGGTGAAGCATGTTATGAACTTCACAAATTGGGCAATTGCAAGT GGCAGCAGCACAGCACTACTATACAGCAAGCGACTGATTACTTTCCAGTTGCGTCATATTTTGAAAGCACGGTGTGATCCTGTCCCTGCT GCTAATGGAGCAATACGTTTCCATTGTGATCCCACCTTCTGGGCAAAGAATGTAGTCAATTTAGGTAATCTAGTAATAGAGAGTAAACCA GCTCCTGGTTATACTCCTAATGTTGTAGTTGGGCAAGTTCCTCCAGGGACAAACCACATTAGTAAAACCCCTGGACAGATTAACTTAGCA CAGCTTCGACTCCAGCACATGCAACAACAAGTATATGCACAGAAACATCAGCAGTTGCAACAGATGAGGATGCAGCAACCACCAGCACCT GTACCAACTACAACAACAACAACACAACAGCATCCTAGACAAGCAGCCCCTCAGATGTTACAACAACAGCCTCCTCGATTGATCAGTGTG CAAACAATGCAAAGAGGCAACATGAACTGTGGAGCTTTTCAAGCCCATCAGATGAGACTGGCTCAGAATGCTGCCAGAATACCAGGGATA CCCAGGCACAGCGGCCCTCAATATTCCATGATGCAGCCACACCTCCAAAGACAACACTCAAACCCAGGGCATGCTGGACCCTTTCCCGTA GTATCGGTACACAACACCACAATCAACCCAACGAGCCCTACTACAGCAACTATGGCAAATGCAAACCGAGGTCCCACCAGCCCATCTGTT ACAGCAATAGAGCTAATCCCCTCAGTTACCAATCCAGAAAACCTTCCATCGCTGCCAGATATTCCACCCATACAGTTGGAAGATGCTGGC TCAAGTAGTTTAGATAATCTACTAAGTAGATACATCTCAGGCAGTCACCTACCCCCACAGCCTACAAGCACCATGAATCCTTCTCCAGGT CCCTCTGCCCTTTCTCCGGGATCATCAGGTTTATCCAATTCTCACACACCTGTGAGACCCCCAAGTACTTCTAGTACTGGCAGTCGAGGC AGCTGTGGGTCATCAGGAAGAACTGCTGAGAAGACAAGTCTTAGTTTCAAATCTGATCAGGTGAAGGTCAAGCAAGAACCTGGGACTGAA GATGAAATATGTAGCTTTTCAGGAGGTGTAAAACAAGAAAAAACAGAGGATGGCAGGAGGAGTGCTTGCATGTTGAGCAGTCCTGAGAGT AGCTTGACACCACCTCTCTCAACCAACCTGCATCTAGAAAGTGAATTGGATGCATTGGCAAGCCTGGAAAACCATGTGAAAATTGAACCT GCAGATATGAATGAAAGCTGCAAACAGTCAGGGCTCAGCAGCCTTGTTAATGGAAAGTCCCCAATTCGAAGCCTCATGCACAGGTCGGCA AGGATTGGAGGAGATGGCAACAATAAAGATGATGACCCAAATGAAGACTGGTGTGCTGTCTGCCAAAACGGAGGAGATCTCTTGTGCTGC GAAAAATGTCCAAAGGTCTTTCATCTAACTTGTCATGTTCCAACACTACTTAGCTTTCCAAGGCTACACTTCCTGGTGTTTGACACAGAG GAGGTTCACGACGTGCTGCGCATCTGGGATGGGCCTGTGGAGAGCGGGGTTCTGCTGAAGGAGCTGAGTGGCCCGGCCCTGCCCAAGGAC CTGCATAGCACCTTCAACTCGGTCGTCCTGCAGTTCAGCACTGACTTCTTCACCAGCAAGCAGGGCTTTGCCATTCAATTTTCAGTGTCC ACAGCAACGTCCTGCAATGACCCTGGGATCCCGCAGAATGGGAGTCGGAGTGGTGACAGTTGGGAAGCCGGCGACTCCACAGTGTTCCAG TGTGACCCTGGCTACGCGCTGCAGGGAAGTGCAGAGATCAGCTGTGTGAAGATCGAGAACAGGTTCTTCTGGCAGCCCAGCCCGCCAACA TGCATCGCTCCCTGCGGGGGAGACCTGACAGGACCATCTGGAGTCATCCTCTCACCAAATTACCCAGAACCCTACCCGCCAGGCAAGGAG TGTGACTGGAAAGTGACCGTCTCACCAGACTACGTCATCGCCCTGGTATTTAACATCTTTAACCTGGAGCCTGGCTATGACTTCCTCCAT ATCTACGACGGACGGGACTCTCTCAGCCCTCTCATAGGAAGCTTCTATGGCTCCCAGCTCCCAGGCCGCATTGAAAGCAGCAGCAACAGC CTCTTCCTCGCCTTCCGCAGCGATGCATCTGTGAGCAATGCTGGCTTCGTCATTGACTATACAGAAAACCCGCGGGAGTCATGTTTTGAT CCTGGTTCCATCAAGAACGGCACACGGGTGGGGTCCGACCTGAAGCTGGGCTCCTCCGTCACCTACTACTGCCACGGGGGCTACGAAGTT GAGGGCACCTCGACCCTGAGCTGCATCCTGGGGCCTGATGGGAAGCCCGTGTGGAACAATCCCCGGCCAGTCTGCACAGCCCCCTGTGGG GGACAGTATGTGGGTTCGGACGGAGTGGTCTTGTCCCCCAACTACCCCCAGAACTACACCAGTGGACAGATCTGCTTGTATTTTGTTACT GTGCCCAAGGACTATGTGGTGTTTGGCCAGTTCGCCTTCTTTCACACGGCCCTCAACGACGTGGTGGAGGTTCACGACGGCCACAGCCAG CACTCGCGGCTCCTCAGCTCCCTCTCGGGCTCCCATACAGGAGAATCACTGCCCTTGGCCACCTCCAATCAAGTTCTCATTAAGTTCAGC GCCAAAGGCCTCGCACCAGCCAGAGGCTTCCACTTTGTCTACCAAGCGGTTCCTCGAACCAGCGCCACGCAGTGCAGCTCTGTGCCGGAA CCCCGCTATGGCAAGAGGCTGGGCAGTGACTTCTCGGTGGGGGCCATCGTCCGCTTCGAATGCAACTCCGGCTATGCCCTGCAGGGGTCG CCAGAGATCGAGTGCCTCCCTGTGCCTGGGGCCTTGGCCCAATGGAATGTCTCAGCGCCCACGTGTGTGGTGCCGTGTGGAGGCAACCTC ACAGAGCGCAGGGGCACCATCCTGTCCCCTGGCTTCCCAGAGCCGTACCTCAACAGCCTCAACTGTGTGTGGAAGATCGTGGTCCCCGAA GGCGCTGGCATCCAGATCCAAGTTGTCAGTTTTGTGACAGAGCAGAACTGGGACTCGCTGGAAGTATTTGATGGTGCAGATAACACTGTA ACCATGCTGGGGAGTTTCTCAGGAACAACCGTGCCTGCCCTTCTGAACAGCACCTCCAACCAGCTCTACCTTCATTTCTACTCAGATATC AGCGTATCTGCAGCTGGCTTCCACTTGGAGTACAAAACGGTGGGCCTGAGCAGTTGTCCGGAACCTGCTGTGCCCAGTAACGGGGTGAAG ACTGGCGAGCGCTACTTGGTGAATGATGTGGTGTCTTTCCAGTGTGAGCCGGGATATGCCCTCCAGGGCCACGCCCACATCTCCTGCATG CCCGGAACAGTGCGGCGATGGAACTACCCTCCTCCACTCTGTATTGCACAGTGTGGGGGAACAGTGGAGGAGATGGAGGGGGTGATCCTG AGCCCCGGCTTCCCAGGCAACTACCCCAGTAACATGGACTGCTCCTGGAAAATAGCACTGCCCGTGGGCTTTGGAGCTCACATCCAGTTC CTGAACTTCTCCACCGAGCCCAACCACGACTACATAGAAATCCGGAATGGCCCCTATGAGACCAGCCGCATGATGGGAAGATTCAGTGGA AGCGAGCTTCCAAGCTCCCTCCTCTCCACGTCCCACGAGACCACCGTGTATTTCCACAGCGACCACTCCCAGAATCGGCCAGGATTCAAG CTGGAGTATCAGGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTGGCTACAACGTGGGA CAATCAGTGACCTTCGAGTGCCTCCCGGGGTATCAATTGACTGGCCACCCTGTCCTCACGTGTCAACATGGCACCAACCGGAACTGGGAC CACCCCCTGCCCAAGTGTGAAGTCCCTTGTGGCGGGAACATCACTTCTTCCAACGGCACTGTGTACTCCCCGGGGTTCCCTAGCCCGTAC TCCAGCTCCCAGGACTGTGTCTGGCTGATCACCGTGCCCATTGGCCATGGCGTCCGCCTCAACCTCAGCCTGCTGCAGACAGAGCCCTCT GGAGATTTCATCACCATCTGGGATGGGCCACAGCAAACAGCACCACGGCTCGGCGTCTTCACCCGGAGCATGGCCAAGAAAACAGTGCAG AGTTCATCCAACCAGGTCCTGCTCAAGTTCCACCGTGATGCAGCCACAGGGGGGATCTTCGCCATAGCTTTCTCCGGGCACTTGGCAGCT GTTTGTACATTGTGACACCCCTCCACGCACACATCTGCCCCCCAGCCACAGAAGCTTGGACCAGAGGTGGACACCTGAGCTGACTGCAGC AGGGGCAATCAGATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGATAAAAA TCCAAGTGCAATGGATTGCTGCTCTTCTACTTTCCATGTGGACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGT GGAAAAATTTCCTTGGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGCAAACCCACCCTTGGGTTCTCTC TTCTCTGAGAGGCTTTTTTGCTTATTCTAGCCTGAATTGATTTATTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGC AATCCTACTTCTGGGAATTATGCAAAGATATGTGCATGAAGATATTGCTTGATATGTTATAACAGGGAAATTAGAAATAATCTAAATGTA AAAATAGTAAGAGATTAGGTATTATAAATTTAAAGTGTATACTCAGAGAGAGAGAGATAGGGAAAGATACAGTCATTACAAATCATTCAT >In-frame_ENST00000358465_ENST00000373380_TCGA-52-7809-01A_TRIM33_chr1_114948032_-_CSMD2_chr1_34128692_length(amino acids)=1894AA_start in transcript=0_stop in transcript=5684 LRLGLGAAAAATRAAGGAGRSGGFKEENMAENKGGGEAESGGGGSGSAPVTAGAAGPAAQEAEPPLTAVLVEEEEEEGGRAGAEGGAAGP DDGGVAAASSGSAQAASSPAASVGTGVAGGAVSTPAPAPASAPAPGPSAGPPPGPPASLLDTCAVCQQSLQSRREAEPKLLPCLHSFCLR CLPEPERQLSVPIPGGSNGDIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSEAPSSSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCI EAHQRVKFTKDHLIRKKEDVSESVGASGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKLLE KKNYVHFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSLLQQLENVTKERQMKLLQQQNDITGLSRQVKHVMNFTNWAIAS GSSTALLYSKRLITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPGYTPNVVVGQVPPGTNHISKTPGQINLA QLRLQHMQQQVYAQKHQQLQQMRMQQPPAPVPTTTTTTQQHPRQAAPQMLQQQPPRLISVQTMQRGNMNCGAFQAHQMRLAQNAARIPGI PRHSGPQYSMMQPHLQRQHSNPGHAGPFPVVSVHNTTINPTSPTTATMANANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLEDAG SSSLDNLLSRYISGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQVKVKQEPGTE DEICSFSGGVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDALASLENHVKIEPADMNESCKQSGLSSLVNGKSPIRSLMHRSA RIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPRLHFLVFDTEEVHDVLRIWDGPVESGVLLKELSGPALPKD LHSTFNSVVLQFSTDFFTSKQGFAIQFSVSTATSCNDPGIPQNGSRSGDSWEAGDSTVFQCDPGYALQGSAEISCVKIENRFFWQPSPPT CIAPCGGDLTGPSGVILSPNYPEPYPPGKECDWKVTVSPDYVIALVFNIFNLEPGYDFLHIYDGRDSLSPLIGSFYGSQLPGRIESSSNS LFLAFRSDASVSNAGFVIDYTENPRESCFDPGSIKNGTRVGSDLKLGSSVTYYCHGGYEVEGTSTLSCILGPDGKPVWNNPRPVCTAPCG GQYVGSDGVVLSPNYPQNYTSGQICLYFVTVPKDYVVFGQFAFFHTALNDVVEVHDGHSQHSRLLSSLSGSHTGESLPLATSNQVLIKFS AKGLAPARGFHFVYQAVPRTSATQCSSVPEPRYGKRLGSDFSVGAIVRFECNSGYALQGSPEIECLPVPGALAQWNVSAPTCVVPCGGNL TERRGTILSPGFPEPYLNSLNCVWKIVVPEGAGIQIQVVSFVTEQNWDSLEVFDGADNTVTMLGSFSGTTVPALLNSTSNQLYLHFYSDI SVSAAGFHLEYKTVGLSSCPEPAVPSNGVKTGERYLVNDVVSFQCEPGYALQGHAHISCMPGTVRRWNYPPPLCIAQCGGTVEEMEGVIL SPGFPGNYPSNMDCSWKIALPVGFGAHIQFLNFSTEPNHDYIEIRNGPYETSRMMGRFSGSELPSSLLSTSHETTVYFHSDHSQNRPGFK LEYQAYELQECPDPEPFANGIVRGAGYNVGQSVTFECLPGYQLTGHPVLTCQHGTNRNWDHPLPKCEVPCGGNITSSNGTVYSPGFPSPY SSSQDCVWLITVPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFHRDAATGGIFAIAFSGHLAA -------------------------------------------------------------- >In-frame_ENST00000369543_ENST00000373381_TCGA-52-7809-01A_TRIM33_chr1_114948032_-_CSMD2_chr1_34128692_length(transcript)=12307nt_BP=2852nt CTGCGGCTGGGGCTGGGGGCGGCGGCGGCGGCGACGCGGGCGGCGGGCGGCGCGGGGCGGTCCGGCGGGTTCAAAGAGGAAAACATGGCG GAAAACAAAGGCGGCGGCGAGGCTGAGAGCGGCGGCGGGGGCAGCGGCAGCGCGCCGGTAACTGCCGGGGCCGCCGGGCCCGCCGCGCAG GAGGCGGAGCCGCCTCTCACCGCGGTGCTGGTGGAGGAGGAGGAGGAGGAAGGCGGCAGGGCCGGCGCTGAGGGCGGCGCGGCCGGGCCC GACGACGGGGGGGTGGCCGCGGCCTCCTCGGGCTCGGCCCAGGCTGCTTCATCTCCTGCGGCCTCAGTGGGCACTGGAGTTGCCGGGGGC GCAGTATCGACGCCGGCTCCAGCTCCAGCCTCGGCTCCCGCTCCGGGTCCCTCGGCAGGGCCGCCTCCTGGACCGCCAGCCTCGCTCCTG GACACCTGCGCCGTGTGTCAGCAGAGCTTGCAGAGCCGGCGTGAGGCGGAGCCCAAGCTGCTGCCCTGTCTTCACTCCTTCTGCCTGCGC TGCCTGCCCGAGCCGGAGCGCCAGCTCAGCGTGCCCATCCCGGGGGGCAGCAACGGCGACATCCAGCAAGTTGGTGTAATACGGTGCCCA GTATGCCGCCAAGAATGCAGACAGATAGACCTTGTGGATAATTATTTTGTGAAAGACACATCTGAAGCTCCTAGCAGTTCTGATGAAAAA TCAGAACAGGTATGTACTAGTTGTGAAGACAATGCAAGTGCAGTTGGCTTTTGTGTAGAATGTGGAGAGTGGCTATGTAAGACATGTATC GAAGCACATCAAAGAGTAAAATTTACTAAAGATCACTTGATCAGGAAGAAAGAAGATGTCTCAGAGTCTGTTGGAGCATCTGGTCAACGC CCTGTTTTCTGCCCTGTACACAAACAAGAACAGTTGAAACTTTTCTGTGAAACATGTGATAGATTGACATGTAGAGACTGTCAGCTATTG GAACACAAAGAACATAGGTATCAGTTTTTGGAAGAAGCTTTTCAAAATCAGAAGGGTGCAATTGAGAATCTACTGGCGAAACTTCTTGAG AAGAAGAATTATGTTCATTTTGCAGCTACTCAGGTGCAGAATAGGATAAAAGAAGTAAATGAGACTAACAAACGAGTAGAACAGGAAATT AAAGTGGCCATTTTCACCCTTATCAATGAAATTAATAAGAAAGGAAAATCTCTCTTACAACAGCTAGAGAATGTTACAAAGGAAAGACAG ATGAAGTTACTACAGCAGCAGAATGACATCACAGGCCTTTCCCGGCAGGTGAAGCATGTTATGAACTTCACAAATTGGGCAATTGCAAGT GGCAGCAGCACAGCACTACTATACAGCAAGCGACTGATTACTTTCCAGTTGCGTCATATTTTGAAAGCACGGTGTGATCCTGTCCCTGCT GCTAATGGAGCAATACGTTTCCATTGTGATCCCACCTTCTGGGCAAAGAATGTAGTCAATTTAGGTAATCTAGTAATAGAGAGTAAACCA GCTCCTGGTTATACTCCTAATGTTGTAGTTGGGCAAGTTCCTCCAGGGACAAACCACATTAGTAAAACCCCTGGACAGATTAACTTAGCA CAGCTTCGACTCCAGCACATGCAACAACAAGTATATGCACAGAAACATCAGCAGTTGCAACAGATGAGGATGCAGCAACCACCAGCACCT GTACCAACTACAACAACAACAACACAACAGCATCCTAGACAAGCAGCCCCTCAGATGTTACAACAACAGCCTCCTCGATTGATCAGTGTG CAAACAATGCAAAGAGGCAACATGAACTGTGGAGCTTTTCAAGCCCATCAGATGAGACTGGCTCAGAATGCTGCCAGAATACCAGGGATA CCCAGGCACAGCGGCCCTCAATATTCCATGATGCAGCCACACCTCCAAAGACAACACTCAAACCCAGGGCATGCTGGACCCTTTCCCGTA GTATCGGTACACAACACCACAATCAACCCAACGAGCCCTACTACAGCAACTATGGCAAATGCAAACCGAGGTCCCACCAGCCCATCTGTT ACAGCAATAGAGCTAATCCCCTCAGTTACCAATCCAGAAAACCTTCCATCGCTGCCAGATATTCCACCCATACAGTTGGAAGATGCTGGC TCAAGTAGTTTAGATAATCTACTAAGTAGATACATCTCAGGCAGTCACCTACCCCCACAGCCTACAAGCACCATGAATCCTTCTCCAGGT CCCTCTGCCCTTTCTCCGGGATCATCAGGTTTATCCAATTCTCACACACCTGTGAGACCCCCAAGTACTTCTAGTACTGGCAGTCGAGGC AGCTGTGGGTCATCAGGAAGAACTGCTGAGAAGACAAGTCTTAGTTTCAAATCTGATCAGGTGAAGGTCAAGCAAGAACCTGGGACTGAA GATGAAATATGTAGCTTTTCAGGAGGTGTAAAACAAGAAAAAACAGAGGATGGCAGGAGGAGTGCTTGCATGTTGAGCAGTCCTGAGAGT AGCTTGACACCACCTCTCTCAACCAACCTGCATCTAGAAAGTGAATTGGATGCATTGGCAAGCCTGGAAAACCATGTGAAAATTGAACCT GCAGATATGAATGAAAGCTGCAAACAGTCAGGGCTCAGCAGCCTTGTTAATGGAAAGTCCCCAATTCGAAGCCTCATGCACAGGTCGGCA AGGATTGGAGGAGATGGCAACAATAAAGATGATGACCCAAATGAAGACTGGTGTGCTGTCTGCCAAAACGGAGGAGATCTCTTGTGCTGC GAAAAATGTCCAAAGGTCTTTCATCTAACTTGTCATGTTCCAACACTACTTAGCTTTCCAAGGCTACACTTCCTGGTGTTTGACACAGAG GAGGTTCACGACGTGCTGCGCATCTGGGATGGGCCTGTGGAGAGCGGGGTTCTGCTGAAGGAGCTGAGTGGCCCGGCCCTGCCCAAGGAC CTGCATAGCACCTTCAACTCGGTCGTCCTGCAGTTCAGCACTGACTTCTTCACCAGCAAGCAGGGCTTTGCCATTCAATTTTCAGTGTCC ACAGCAACGTCCTGCAATGACCCTGGGATCCCGCAGAATGGGAGTCGGAGTGGTGACAGTTGGGAAGCCGGCGACTCCACAGTGTTCCAG TGTGACCCTGGCTACGCGCTGCAGGGAAGTGCAGAGATCAGCTGTGTGAAGATCGAGAACAGGTTCTTCTGGCAGCCCAGCCCGCCAACA TGCATCGCTCCCTGCGGGGGAGACCTGACAGGACCATCTGGAGTCATCCTCTCACCAAATTACCCAGAACCCTACCCGCCAGGCAAGGAG TGTGACTGGAAAGTGACCGTCTCACCAGACTACGTCATCGCCCTGGTATTTAACATCTTTAACCTGGAGCCTGGCTATGACTTCCTCCAT ATCTACGACGGACGGGACTCTCTCAGCCCTCTCATAGGAAGCTTCTATGGCTCCCAGCTCCCAGGCCGCATTGAAAGCAGCAGCAACAGC CTCTTCCTCGCCTTCCGCAGCGATGCATCTGTGAGCAATGCTGGCTTCGTCATTGACTATACAGAAAACCCGCGGGAGTCATGTTTTGAT CCTGGTTCCATCAAGAACGGCACACGGGTGGGGTCCGACCTGAAGCTGGGCTCCTCCGTCACCTACTACTGCCACGGGGGCTACGAAGTT GAGGGCACCTCGACCCTGAGCTGCATCCTGGGGCCTGATGGGAAGCCCGTGTGGAACAATCCCCGGCCAGTCTGCACAGCCCCCTGTGGG GGACAGTATGTGGGTTCGGACGGAGTGGTCTTGTCCCCCAACTACCCCCAGAACTACACCAGTGGACAGATCTGCTTGTATTTTGTTACT GTGCCCAAGGACTATGTGGTGTTTGGCCAGTTCGCCTTCTTTCACACGGCCCTCAACGACGTGGTGGAGGTTCACGACGGCCACAGCCAG CACTCGCGGCTCCTCAGCTCCCTCTCGGGCTCCCATACAGGAGAATCACTGCCCTTGGCCACCTCCAATCAAGTTCTCATTAAGTTCAGC GCCAAAGGCCTCGCACCAGCCAGAGGCTTCCACTTTGTCTACCAAGCGGTTCCTCGAACCAGCGCCACGCAGTGCAGCTCTGTGCCGGAA CCCCGCTATGGCAAGAGGCTGGGCAGTGACTTCTCGGTGGGGGCCATCGTCCGCTTCGAATGCAACTCCGGCTATGCCCTGCAGGGGTCG CCAGAGATCGAGTGCCTCCCTGTGCCTGGGGCCTTGGCCCAATGGAATGTCTCAGCGCCCACGTGTGTGGTGCCGTGTGGAGGCAACCTC ACAGAGCGCAGGGGCACCATCCTGTCCCCTGGCTTCCCAGAGCCGTACCTCAACAGCCTCAACTGTGTGTGGAAGATCGTGGTCCCCGAA GGCGCTGGCATCCAGATCCAAGTTGTCAGTTTTGTGACAGAGCAGAACTGGGACTCGCTGGAAGTATTTGATGGTGCAGATAACACTGTA ACCATGCTGGGGAGTTTCTCAGGAACAACCGTGCCTGCCCTTCTGAACAGCACCTCCAACCAGCTCTACCTTCATTTCTACTCAGATATC AGCGTATCTGCAGCTGGCTTCCACTTGGAGTACAAAACGGTGGGCCTGAGCAGTTGTCCGGAACCTGCTGTGCCCAGTAACGGGGTGAAG ACTGGCGAGCGCTACTTGGTGAATGATGTGGTGTCTTTCCAGTGTGAGCCGGGATATGCCCTCCAGGGCCACGCCCACATCTCCTGCATG CCCGGAACAGTGCGGCGATGGAACTACCCTCCTCCACTCTGTATTGCACAGTGTGGGGGAACAGTGGAGGAGATGGAGGGGGTGATCCTG AGCCCCGGCTTCCCAGGCAACTACCCCAGTAACATGGACTGCTCCTGGAAAATAGCACTGCCCGTGGGCTTTGGAGCTCACATCCAGTTC CTGAACTTCTCCACCGAGCCCAACCACGACTACATAGAAATCCGGAATGGCCCCTATGAGACCAGCCGCATGATGGGAAGATTCAGTGGA AGCGAGCTTCCAAGCTCCCTCCTCTCCACGTCCCACGAGACCACCGTGTATTTCCACAGCGACCACTCCCAGAATCGGCCAGGATTCAAG CTGGAGTATCAGGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTGGCTACAACGTGGGA CAATCAGTGACCTTCGAGTGCCTCCCGGGGTATCAATTGACTGGCCACCCTGTCCTCACGTGTCAACATGGCACCAACCGGAACTGGGAC CACCCCCTGCCCAAGTGTGAAGTCCCTTGTGGCGGGAACATCACTTCTTCCAACGGCACTGTGTACTCCCCGGGGTTCCCTAGCCCGTAC TCCAGCTCCCAGGACTGTGTCTGGCTGATCACCGTGCCCATTGGCCATGGCGTCCGCCTCAACCTCAGCCTGCTGCAGACAGAGCCCTCT GGAGATTTCATCACCATCTGGGATGGGCCACAGCAAACAGCACCACGGCTCGGCGTCTTCACCCGGAGCATGGCCAAGAAAACAGTGCAG AGTTCATCCAACCAGGTCCTGCTCAAGTTCCACCGTGATGCAGCCACAGGGGGGATCTTCGCCATAGCTTTCTCCGCTTATCCACTCACC AAATGCCCTCCTCCCACCATCCTCCCCAACGCCGAAGTCGTCACAGAGAATGAAGAATTCAATATAGGTGACATCGTACGCTACAGATGC CTCCCTGGCTTTACCTTAGTGGGGAATGAAATTCTGACCTGCAAACTTGGAACCTACCTGCAGTTTGAAGGACCACCCCCGATATGTGAA GTGCACTGTCCAACAAATGAGCTTCTGACAGACTCCACAGGCGTGATCCTGAGCCAGAGCTACCCTGGAAGCTATCCCCAGTTCCAGACC TGCTCTTGGCTGGTGAGAGTGGAGCCCGACTATAACATCTCCCTCACAGTGGAGTACTTCCTCAGCGAGAAGCAATATGATGAGTTTGAG ATTTTTGATGGTCCATCAGGACAGAGTCCTCTGCTGAAAGCCCTCAGTGGGAATTACTCAGCTCCCCTGATTGTCACCAGCTCAAGCAAC TCTGTGTACCTGCGTTGGTCATCTGATCACGCCTACAATCGGAAGGGCTTCAAGATCCGCTATTCAGCCCCTTACTGCAGCCTGCCCAGG GCTCCACTCCATGGCTTCATCCTAGGCCAGACCAGCACCCAGCCCGGGGGCTCCATCCACTTTGGCTGCAACGCCGGCTACCGCCTGGTG GGACACAGCATGGCCATCTGTACCCGGCACCCCCAGGGCTACCACCTGTGGAGCGAAGCCATCCCTCTCTGTCAAGCTCTTTCCTGTGGG CTTCCTGAGGCCCCCAAGAATGGAATGGTGTTTGGCAAGGAGTACACAGTGGGAACCAAGGCCATGTACAGCTGCAGTGAAGGCTACCAC CTCCAGGCAGGCGCTGAGGCCACTGCAGAGTGTCTGGACACAGGCCTATGGAGCAACCGCAATGTCCCACCACAGTGTGTCCCTGTGACT TGTCCTGATGTCAGTAGCATCAGCGTGGAGCATGGCCGATGGAGGCTTATCTTTGAGACACAGTATCAGTTCCAGGCCCAGCTGATGCTC ATCTGTGACCCTGGCTACTACTATACTGGCCAAAGGGTCATCCGCTGTCAGGCCAATGGCAAATGGAGCCTCGGGGACTCTACGCCCACC TGCCGAATCATCTCCTGTGGAGAGCTCCCGATTCCCCCCAATGGCCACCGCATCGGAACACTGTCTGTCTACGGGGCAACAGCCATCTTC TCCTGCAATTCCGGATACACACTGGTGGGCTCCAGGGTGCGTGAGTGCATGGCCAATGGGCTCTGGAGTGGCTCTGAAGTCCGCTGCCTT GCCACTCAGACCAAGCTCCACTCCATTTTCTATAAGCTCCTCTTCGATGTACTCTCTTCCCCATCCCTCACCAAAGCTGGACACTGTGGG ACTCCTGAGCCCATTGTCAACGGACACATCAATGGGGAGAACTACAGCTACCGGGGCAGTGTGGTGTACCAATGCAATGCTGGCTTCCGC CTGATCGGCATGTCTGTGCGCATCTGCCAGCAGGATCATCACTGGTCGGGCAAGACCCCTTTCTGTGTGCCAATTACCTGTGGACACCCA GGCAACCCTGTCAACGGCCTCACTCAGGGTAACCAGTTTAACCTCAACGATGTGGTCAAGTTTGTTTGCAACCCTGGGTATATGGCTGAG GGGGCTGCTAGGTCCCAATGCCTGGCCAGCGGGCAATGGAGTGACATGCTGCCCACCTGCAGAATCATCAACTGTACAGATCCTGGACAC CAAGAAAATAGTGTTCGTCAGGTCCACGCCAGCGGCCCGCACAGGTTCAGCTTCGGCACCACTGTGTCTTACCGGTGCAACCACGGCTTC TACCTCCTGGGCACCCCAGTGCTCAGCTGCCAGGGAGATGGCACATGGGACCGTCCCCGCCCCCAGTGTCTCTTGGTGTCCTGTGGCCAT CCGGGCTCCCCGCCTCACTCCCAGATGTCTGGAGACAGTTATACTGTGGGAGCAGTGGTGCGGTACAGCTGCATCGGCAAGCGTACTCTG GTGGGAAACAGCACCCGCATGTGTGGGCTGGATGGACACTGGACTGGCTCCCTCCCTCACTGCTCAGGAACCAGCGTGGGAGTTTGCGGT GACCCTGGGATCCCGGCTCATGGCATCCGTTTGGGGGACAGCTTTGATCCAGGCACTGTGATGCGCTTCAGCTGTGAAGCTGGCCACGTG CTCCGGGGATCGTCAGAGCGCACCTGTCAAGCCAATGGCTCGTGGAGCGGCTCGCAGCCTGAGTGTGGAGTGATCTCTTGTGGGAACCCT GGGACTCCAAGTAATGCCCGAGTTGTGTTCAGTGATGGCCTGGTTTTCTCCAGCTCTATCGTCTATGAGTGCCGGGAAGGATACTACGCC ACAGGCCTGCTCAGCCGTCACTGCTCGGTCAATGGTACCTGGACAGGCAGTGACCCTGAGTGCCTCGTCATAAACTGTGGTGACCCTGGG ATTCCAGCCAATGGCCTTCGGCTGGGCAATGACTTCAGGTACAACAAAACTGTGACATATCAGTGTGTCCCTGGCTATATGATGGAGTCA CATAGAGTATCTGTGCTGAGCTGCACCAAGGACCGGACATGGAATGGAACCAAGCCCGTCTGCAAAGCTCTCATGTGCAAGCCACCTCCG CTCATCCCCAATGGGAAGGTGGTGGGGTCTGACTTCATGTGGGGCTCAAGTGTGACTTATGCCTGCCTGGAGGGGTACCAGCTCTCCCTG CCCGCGGTGTTCACCTGTGAGGGAAATGGGTCCTGGACCGGAGAGCTGCCTCAGTGTTTCCCTGTGTTCTGCGGGGATCCTGGTGTCCCG TCCCGTGGGAGGAGAGAGGACCGAGGCTTCTCCTACAGGTCATCTGTCTCCTTCTCCTGCCATCCCCCTCTGGTGCTGGTGGGCTCTCCA CGCAGGTTTTGCCAGTCAGATGGGACATGGAGTGGCACCCAGCCCAGCTGCATAGATCCGACCCTGACCACGTGTGCGGACCCTGGTGTG CCACAGTTTGGGATACAGAACAATTCTCAGGGCTACCAGGTTGGAAGCACAGTCCTCTTCCGTTGTCAAAAAGGCTACCTGCTTCAGGGC TCCACCACCAGGACCTGCCTCCCAAACCTGACCTGGAGTGGAACCCCACCTGACTGTGTCCCCCACCACTGCAGGCAGCCAGAGACGCCA ACGCATGCCAACGTCGGGGCCCTGGATTTGCCCTCCATGGGCTACACGCTCATCTACTCCTGCCAGGAGGGCTTCTCCCTCAAGGGTGGC TCCGAGCACCGCACCTGCAAGGCGGATGGCAGCTGGACAGGCAAGCCGCCCATCTGCCTGGAGGTCCGGCCCAGTGGGAGACCCATCAAC ACTGCCCGGGAGCCACCGCTCACCCAAGCCTTGATTCCTGGGGATGTTTTTGCCAAGAATTCCCTGTGGAAAGGGGCCTATGAATACCAG GGGAAGAAGCAGCCAGCCATGCTCAGAGTGACTGGCTTCCAAGTTGCCAACAGCAAGGTCAATGCCACCATGATCGACCACAGTGGCGTG GAGCTGCACTTGGCTGGAACTTACAAGAAAGAAGATTTTCATCTCCTACTCCAGGTGTACCAGATTACAGGGCCTGTGGAGATCTTTATG AATAAGTTCAAAGATGATCACTGGGCTTTAGATGGCCATGTCTCGTCAGAGTCCTCCGGAGCCACCTTCATCTACCAAGGCTCTGTCAAG GGCCAAGGCTTTGGGCAGTTCGGCTTTCAAAGACTGGACCTCAGGCTGCTGGAGTCAGACCCCGAGTCCATTGGCCGCCACTTTGCTTCC AACAGCAGCTCAGTGGCAGCCGCGATCCTGGTGCCTTTCATCGCCCTCATTATTGCGGGCTTCGTGCTCTATCTCTACAAGCACAGGAGA AGACCCAAAGTTCCTTTCAATGGCTATGCTGGCCACGAGAACACCAATGTTCGGGCCACATTTGAGAACCCAATGTACGACCGCAACATC CAGCCCACAGACATCATGGCCAGCGAGGCGGAGTTCACAGTCAGCACAGTGTGCACAGCAGTATAGCCACCCGGCCTGGCCGCCACCACC GCCACCGAGAGCCCCGCCTCCAGCAGCCGTTCCCCAGGGGGCAGGAAGTAGGCTCCCCTGAGCACAGTGCCCAGTGCCCATCTTCGTTCG TCTCCTTGCCTGTGTCTGCTACTGCTGGGACTCAGGCCCTCGCCCTGCCGCCATCTATGCCAGTTACCCTGGAGAGGACTCCTGCCGTGT CCTGAAAAGGCAGAAAAGGAAGAGGGGCTGCAGACAGAGGAAGAAAGTTTATGGATTTAAAATAGCAAAGCAACTTGTGGATCTGTGTGT GTGTGTGTGTGTATGGGCCTGATCACACACAAACACACACACCTCTCCTTCATTCACGTCCTATGGAAGAGACCATAAAGGCTTCAAAAC TAGAAGTGCGCATGAAGGATGCTTCATGCCCTGTTCCCCACACAGAGAAGAGATGAAGAGGGGGAGGTACGGTCAGCTTTCAAAACAATA TGCCCCCCGCCCATCCCATGTGTGAGGACATGGTGACTCGGTGACTGTAACAGTAGGACACATCCCATCATGCGGTCAGAGTGCAGAAAC CCGGTCAGCGTGCAGAAACCAGCTGTCTGCTGATGAACGGCCCATCTGCACAGCGGCAGCAAGGATTACCCCAAGGGCAGGAAAAAAGTC TTTGGAAATAGATTGAAAATCAGTTTCTTTATTTTTTTCAAACACTGTTTTATTGAGTTCTAAACCCAGTGGATTAAAAAGTCATTTGGG TCCTGGGAAGCACTGGGAAAGAAGGGAGAGCCGGGGAGGATAGGGCAGGAGTCTGGCCAGGAGCCCAAGGTCAAGTCTGGCTGTCAACTG ACAAAGAGAAGAGAAGACAAGTCTGTGGCCCAGACAGGATGCCAAGTCTGGGGGCAGCAGCAGGGTCCTTGAGAGAACAGGGGAGCAAGC CTGCCCCAGTACCCAAAAAACAATGGCTATCATGTACTGGGGTTATTCTCTGTGCCTGACACTTTACCTGTAGTATTTCTAGTCTGCACA ATAACACCAAAATGTAGGATTTGTTATTCCCCTTTGACAGATGAGAAAACAGAAGCCTGCAAAGGTAAAGACAGAGTTAGGAAGTGTGGA GTCAGAATGCAAACCCAGATCAGTCTGCCCCAAAGTCCACTACACCAGCTGCCAGAAACCCTGTTCTAGAAGGGGCAGCTAAGAAGGGAG GAGCCGATGAATCTCTACAGTAGCACTGTGGCCAGGTCTGGAAAGCCAGGCAAGACACCTGTGTGTCCTATCTGGGTTCTGCTGTCTCCG CGTAGGCAGCTTCGGGGCAAGGATTCAACTCCCCAGGCCTCCCACGGTTGGTGCTGGCTCCTTGGCTCCCAGCAGCCGCTGACCATAGCC AGCAAAAGACCTGGCAGGTCCTGAATCAAAACAACAGAGTGGCTGAAAGTCACACCTCTCCAGCTCCTTGCGAGTGGGTTTGATTGATTT TGACAGCTATATCATGCTTGGGTCGTTCATGAATTCCATGAGAATTGTTGGGAAGTTCATGAGTTTAGGAATCAAAGTATAGCATTTAGG GCCACTTTCTCTGTCCTCGGGAAGGCCCCCACAAGCTTAAGCCCCTGTATACGTGTGACATGCTGGCCTCAGAGATTCATGTCACATATT GAAATAGCAAATAGAAATGTGCAGGAGCGGAGGGACAGCGACACCTGGTTCTTAAGCAAATTCTAGATTGGAACAATTAGAAGATCTGAC TGATGTTAAGAGTGGCCAGAGGAAAGTGAGAGGCGTCCATTTCCAGCAGACACAATGGAGGCTGACAGAGGCAGGAGCCTACCCCTGGCC ACACCACCTCTGGGACACGGCACCCCCCTGGGCCTGGAGGGAGAGGGCCAATCCAGACACACTCACACTCTCATCTCTTTCCTTGGCTGG AAACAAGTGCAGGAAGCTCCCCTCCCAATTTCTTATGCTCCCTTCCCCCTTACACTCCTCTCCTTCGACTGCTCCCTTCCCCCTTCTTAT GCCCCTCTCAGACCACCCAGCGGATGCCTATTCCCGCCCCCCACCCCTCCCCTGCGTCTCCTTGTAAAGTTCCATGAGATGCTCGAGGAG CACCTGCTGGTGGGGCACCCAGCACTCTGCTGGGCATCACCCTCCGCACCCCTGACATTTCTCTCCACCTCCAGAGGCTTGGAAGGGAAC AGGGCAGATGAGGCCCTTCACCCACCATCTACGCCATATACCCATCACCATCCCATGAGGAAAAAAAAAAAAGTAAAACAAAGACAAAAA AAATCTTTTGTACAGAGATATATTTTTATTATACAAAGTTTGTACAGTACCAAAAAAGAAAAAAAAAAAGGTGTAAATTTTTTTTTCATT ATTGTAGGTAAACGGTAGTGGAAGCCTTTTTTGTAAATGTAATAAAATGTATAAATATGGTTTTCAGAAAACATCAAGTGCTGTAAATAT GTAATCTACACACCTTCTTGGCTTGTCTGCAGTATATACATTTAATTTATCTGTCTCTGTATATGAGGCTTCCCCCTGGGGTCCTGCATT >In-frame_ENST00000369543_ENST00000373381_TCGA-52-7809-01A_TRIM33_chr1_114948032_-_CSMD2_chr1_34128692_length(amino acids)=3231AA_start in transcript=0_stop in transcript=9695 LRLGLGAAAAATRAAGGAGRSGGFKEENMAENKGGGEAESGGGGSGSAPVTAGAAGPAAQEAEPPLTAVLVEEEEEEGGRAGAEGGAAGP DDGGVAAASSGSAQAASSPAASVGTGVAGGAVSTPAPAPASAPAPGPSAGPPPGPPASLLDTCAVCQQSLQSRREAEPKLLPCLHSFCLR CLPEPERQLSVPIPGGSNGDIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSEAPSSSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCI EAHQRVKFTKDHLIRKKEDVSESVGASGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKLLE KKNYVHFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSLLQQLENVTKERQMKLLQQQNDITGLSRQVKHVMNFTNWAIAS GSSTALLYSKRLITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPGYTPNVVVGQVPPGTNHISKTPGQINLA QLRLQHMQQQVYAQKHQQLQQMRMQQPPAPVPTTTTTTQQHPRQAAPQMLQQQPPRLISVQTMQRGNMNCGAFQAHQMRLAQNAARIPGI PRHSGPQYSMMQPHLQRQHSNPGHAGPFPVVSVHNTTINPTSPTTATMANANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLEDAG SSSLDNLLSRYISGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQVKVKQEPGTE DEICSFSGGVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDALASLENHVKIEPADMNESCKQSGLSSLVNGKSPIRSLMHRSA RIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPRLHFLVFDTEEVHDVLRIWDGPVESGVLLKELSGPALPKD LHSTFNSVVLQFSTDFFTSKQGFAIQFSVSTATSCNDPGIPQNGSRSGDSWEAGDSTVFQCDPGYALQGSAEISCVKIENRFFWQPSPPT CIAPCGGDLTGPSGVILSPNYPEPYPPGKECDWKVTVSPDYVIALVFNIFNLEPGYDFLHIYDGRDSLSPLIGSFYGSQLPGRIESSSNS LFLAFRSDASVSNAGFVIDYTENPRESCFDPGSIKNGTRVGSDLKLGSSVTYYCHGGYEVEGTSTLSCILGPDGKPVWNNPRPVCTAPCG GQYVGSDGVVLSPNYPQNYTSGQICLYFVTVPKDYVVFGQFAFFHTALNDVVEVHDGHSQHSRLLSSLSGSHTGESLPLATSNQVLIKFS AKGLAPARGFHFVYQAVPRTSATQCSSVPEPRYGKRLGSDFSVGAIVRFECNSGYALQGSPEIECLPVPGALAQWNVSAPTCVVPCGGNL TERRGTILSPGFPEPYLNSLNCVWKIVVPEGAGIQIQVVSFVTEQNWDSLEVFDGADNTVTMLGSFSGTTVPALLNSTSNQLYLHFYSDI SVSAAGFHLEYKTVGLSSCPEPAVPSNGVKTGERYLVNDVVSFQCEPGYALQGHAHISCMPGTVRRWNYPPPLCIAQCGGTVEEMEGVIL SPGFPGNYPSNMDCSWKIALPVGFGAHIQFLNFSTEPNHDYIEIRNGPYETSRMMGRFSGSELPSSLLSTSHETTVYFHSDHSQNRPGFK LEYQAYELQECPDPEPFANGIVRGAGYNVGQSVTFECLPGYQLTGHPVLTCQHGTNRNWDHPLPKCEVPCGGNITSSNGTVYSPGFPSPY SSSQDCVWLITVPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFHRDAATGGIFAIAFSAYPLT KCPPPTILPNAEVVTENEEFNIGDIVRYRCLPGFTLVGNEILTCKLGTYLQFEGPPPICEVHCPTNELLTDSTGVILSQSYPGSYPQFQT CSWLVRVEPDYNISLTVEYFLSEKQYDEFEIFDGPSGQSPLLKALSGNYSAPLIVTSSSNSVYLRWSSDHAYNRKGFKIRYSAPYCSLPR APLHGFILGQTSTQPGGSIHFGCNAGYRLVGHSMAICTRHPQGYHLWSEAIPLCQALSCGLPEAPKNGMVFGKEYTVGTKAMYSCSEGYH LQAGAEATAECLDTGLWSNRNVPPQCVPVTCPDVSSISVEHGRWRLIFETQYQFQAQLMLICDPGYYYTGQRVIRCQANGKWSLGDSTPT CRIISCGELPIPPNGHRIGTLSVYGATAIFSCNSGYTLVGSRVRECMANGLWSGSEVRCLATQTKLHSIFYKLLFDVLSSPSLTKAGHCG TPEPIVNGHINGENYSYRGSVVYQCNAGFRLIGMSVRICQQDHHWSGKTPFCVPITCGHPGNPVNGLTQGNQFNLNDVVKFVCNPGYMAE GAARSQCLASGQWSDMLPTCRIINCTDPGHQENSVRQVHASGPHRFSFGTTVSYRCNHGFYLLGTPVLSCQGDGTWDRPRPQCLLVSCGH PGSPPHSQMSGDSYTVGAVVRYSCIGKRTLVGNSTRMCGLDGHWTGSLPHCSGTSVGVCGDPGIPAHGIRLGDSFDPGTVMRFSCEAGHV LRGSSERTCQANGSWSGSQPECGVISCGNPGTPSNARVVFSDGLVFSSSIVYECREGYYATGLLSRHCSVNGTWTGSDPECLVINCGDPG IPANGLRLGNDFRYNKTVTYQCVPGYMMESHRVSVLSCTKDRTWNGTKPVCKALMCKPPPLIPNGKVVGSDFMWGSSVTYACLEGYQLSL PAVFTCEGNGSWTGELPQCFPVFCGDPGVPSRGRREDRGFSYRSSVSFSCHPPLVLVGSPRRFCQSDGTWSGTQPSCIDPTLTTCADPGV PQFGIQNNSQGYQVGSTVLFRCQKGYLLQGSTTRTCLPNLTWSGTPPDCVPHHCRQPETPTHANVGALDLPSMGYTLIYSCQEGFSLKGG SEHRTCKADGSWTGKPPICLEVRPSGRPINTAREPPLTQALIPGDVFAKNSLWKGAYEYQGKKQPAMLRVTGFQVANSKVNATMIDHSGV ELHLAGTYKKEDFHLLLQVYQITGPVEIFMNKFKDDHWALDGHVSSESSGATFIYQGSVKGQGFGQFGFQRLDLRLLESDPESIGRHFAS -------------------------------------------------------------- >In-frame_ENST00000369543_ENST00000373380_TCGA-52-7809-01A_TRIM33_chr1_114948032_-_CSMD2_chr1_34128692_length(transcript)=6339nt_BP=2852nt CTGCGGCTGGGGCTGGGGGCGGCGGCGGCGGCGACGCGGGCGGCGGGCGGCGCGGGGCGGTCCGGCGGGTTCAAAGAGGAAAACATGGCG GAAAACAAAGGCGGCGGCGAGGCTGAGAGCGGCGGCGGGGGCAGCGGCAGCGCGCCGGTAACTGCCGGGGCCGCCGGGCCCGCCGCGCAG GAGGCGGAGCCGCCTCTCACCGCGGTGCTGGTGGAGGAGGAGGAGGAGGAAGGCGGCAGGGCCGGCGCTGAGGGCGGCGCGGCCGGGCCC GACGACGGGGGGGTGGCCGCGGCCTCCTCGGGCTCGGCCCAGGCTGCTTCATCTCCTGCGGCCTCAGTGGGCACTGGAGTTGCCGGGGGC GCAGTATCGACGCCGGCTCCAGCTCCAGCCTCGGCTCCCGCTCCGGGTCCCTCGGCAGGGCCGCCTCCTGGACCGCCAGCCTCGCTCCTG GACACCTGCGCCGTGTGTCAGCAGAGCTTGCAGAGCCGGCGTGAGGCGGAGCCCAAGCTGCTGCCCTGTCTTCACTCCTTCTGCCTGCGC TGCCTGCCCGAGCCGGAGCGCCAGCTCAGCGTGCCCATCCCGGGGGGCAGCAACGGCGACATCCAGCAAGTTGGTGTAATACGGTGCCCA GTATGCCGCCAAGAATGCAGACAGATAGACCTTGTGGATAATTATTTTGTGAAAGACACATCTGAAGCTCCTAGCAGTTCTGATGAAAAA TCAGAACAGGTATGTACTAGTTGTGAAGACAATGCAAGTGCAGTTGGCTTTTGTGTAGAATGTGGAGAGTGGCTATGTAAGACATGTATC GAAGCACATCAAAGAGTAAAATTTACTAAAGATCACTTGATCAGGAAGAAAGAAGATGTCTCAGAGTCTGTTGGAGCATCTGGTCAACGC CCTGTTTTCTGCCCTGTACACAAACAAGAACAGTTGAAACTTTTCTGTGAAACATGTGATAGATTGACATGTAGAGACTGTCAGCTATTG GAACACAAAGAACATAGGTATCAGTTTTTGGAAGAAGCTTTTCAAAATCAGAAGGGTGCAATTGAGAATCTACTGGCGAAACTTCTTGAG AAGAAGAATTATGTTCATTTTGCAGCTACTCAGGTGCAGAATAGGATAAAAGAAGTAAATGAGACTAACAAACGAGTAGAACAGGAAATT AAAGTGGCCATTTTCACCCTTATCAATGAAATTAATAAGAAAGGAAAATCTCTCTTACAACAGCTAGAGAATGTTACAAAGGAAAGACAG ATGAAGTTACTACAGCAGCAGAATGACATCACAGGCCTTTCCCGGCAGGTGAAGCATGTTATGAACTTCACAAATTGGGCAATTGCAAGT GGCAGCAGCACAGCACTACTATACAGCAAGCGACTGATTACTTTCCAGTTGCGTCATATTTTGAAAGCACGGTGTGATCCTGTCCCTGCT GCTAATGGAGCAATACGTTTCCATTGTGATCCCACCTTCTGGGCAAAGAATGTAGTCAATTTAGGTAATCTAGTAATAGAGAGTAAACCA GCTCCTGGTTATACTCCTAATGTTGTAGTTGGGCAAGTTCCTCCAGGGACAAACCACATTAGTAAAACCCCTGGACAGATTAACTTAGCA CAGCTTCGACTCCAGCACATGCAACAACAAGTATATGCACAGAAACATCAGCAGTTGCAACAGATGAGGATGCAGCAACCACCAGCACCT GTACCAACTACAACAACAACAACACAACAGCATCCTAGACAAGCAGCCCCTCAGATGTTACAACAACAGCCTCCTCGATTGATCAGTGTG CAAACAATGCAAAGAGGCAACATGAACTGTGGAGCTTTTCAAGCCCATCAGATGAGACTGGCTCAGAATGCTGCCAGAATACCAGGGATA CCCAGGCACAGCGGCCCTCAATATTCCATGATGCAGCCACACCTCCAAAGACAACACTCAAACCCAGGGCATGCTGGACCCTTTCCCGTA GTATCGGTACACAACACCACAATCAACCCAACGAGCCCTACTACAGCAACTATGGCAAATGCAAACCGAGGTCCCACCAGCCCATCTGTT ACAGCAATAGAGCTAATCCCCTCAGTTACCAATCCAGAAAACCTTCCATCGCTGCCAGATATTCCACCCATACAGTTGGAAGATGCTGGC TCAAGTAGTTTAGATAATCTACTAAGTAGATACATCTCAGGCAGTCACCTACCCCCACAGCCTACAAGCACCATGAATCCTTCTCCAGGT CCCTCTGCCCTTTCTCCGGGATCATCAGGTTTATCCAATTCTCACACACCTGTGAGACCCCCAAGTACTTCTAGTACTGGCAGTCGAGGC AGCTGTGGGTCATCAGGAAGAACTGCTGAGAAGACAAGTCTTAGTTTCAAATCTGATCAGGTGAAGGTCAAGCAAGAACCTGGGACTGAA GATGAAATATGTAGCTTTTCAGGAGGTGTAAAACAAGAAAAAACAGAGGATGGCAGGAGGAGTGCTTGCATGTTGAGCAGTCCTGAGAGT AGCTTGACACCACCTCTCTCAACCAACCTGCATCTAGAAAGTGAATTGGATGCATTGGCAAGCCTGGAAAACCATGTGAAAATTGAACCT GCAGATATGAATGAAAGCTGCAAACAGTCAGGGCTCAGCAGCCTTGTTAATGGAAAGTCCCCAATTCGAAGCCTCATGCACAGGTCGGCA AGGATTGGAGGAGATGGCAACAATAAAGATGATGACCCAAATGAAGACTGGTGTGCTGTCTGCCAAAACGGAGGAGATCTCTTGTGCTGC GAAAAATGTCCAAAGGTCTTTCATCTAACTTGTCATGTTCCAACACTACTTAGCTTTCCAAGGCTACACTTCCTGGTGTTTGACACAGAG GAGGTTCACGACGTGCTGCGCATCTGGGATGGGCCTGTGGAGAGCGGGGTTCTGCTGAAGGAGCTGAGTGGCCCGGCCCTGCCCAAGGAC CTGCATAGCACCTTCAACTCGGTCGTCCTGCAGTTCAGCACTGACTTCTTCACCAGCAAGCAGGGCTTTGCCATTCAATTTTCAGTGTCC ACAGCAACGTCCTGCAATGACCCTGGGATCCCGCAGAATGGGAGTCGGAGTGGTGACAGTTGGGAAGCCGGCGACTCCACAGTGTTCCAG TGTGACCCTGGCTACGCGCTGCAGGGAAGTGCAGAGATCAGCTGTGTGAAGATCGAGAACAGGTTCTTCTGGCAGCCCAGCCCGCCAACA TGCATCGCTCCCTGCGGGGGAGACCTGACAGGACCATCTGGAGTCATCCTCTCACCAAATTACCCAGAACCCTACCCGCCAGGCAAGGAG TGTGACTGGAAAGTGACCGTCTCACCAGACTACGTCATCGCCCTGGTATTTAACATCTTTAACCTGGAGCCTGGCTATGACTTCCTCCAT ATCTACGACGGACGGGACTCTCTCAGCCCTCTCATAGGAAGCTTCTATGGCTCCCAGCTCCCAGGCCGCATTGAAAGCAGCAGCAACAGC CTCTTCCTCGCCTTCCGCAGCGATGCATCTGTGAGCAATGCTGGCTTCGTCATTGACTATACAGAAAACCCGCGGGAGTCATGTTTTGAT CCTGGTTCCATCAAGAACGGCACACGGGTGGGGTCCGACCTGAAGCTGGGCTCCTCCGTCACCTACTACTGCCACGGGGGCTACGAAGTT GAGGGCACCTCGACCCTGAGCTGCATCCTGGGGCCTGATGGGAAGCCCGTGTGGAACAATCCCCGGCCAGTCTGCACAGCCCCCTGTGGG GGACAGTATGTGGGTTCGGACGGAGTGGTCTTGTCCCCCAACTACCCCCAGAACTACACCAGTGGACAGATCTGCTTGTATTTTGTTACT GTGCCCAAGGACTATGTGGTGTTTGGCCAGTTCGCCTTCTTTCACACGGCCCTCAACGACGTGGTGGAGGTTCACGACGGCCACAGCCAG CACTCGCGGCTCCTCAGCTCCCTCTCGGGCTCCCATACAGGAGAATCACTGCCCTTGGCCACCTCCAATCAAGTTCTCATTAAGTTCAGC GCCAAAGGCCTCGCACCAGCCAGAGGCTTCCACTTTGTCTACCAAGCGGTTCCTCGAACCAGCGCCACGCAGTGCAGCTCTGTGCCGGAA CCCCGCTATGGCAAGAGGCTGGGCAGTGACTTCTCGGTGGGGGCCATCGTCCGCTTCGAATGCAACTCCGGCTATGCCCTGCAGGGGTCG CCAGAGATCGAGTGCCTCCCTGTGCCTGGGGCCTTGGCCCAATGGAATGTCTCAGCGCCCACGTGTGTGGTGCCGTGTGGAGGCAACCTC ACAGAGCGCAGGGGCACCATCCTGTCCCCTGGCTTCCCAGAGCCGTACCTCAACAGCCTCAACTGTGTGTGGAAGATCGTGGTCCCCGAA GGCGCTGGCATCCAGATCCAAGTTGTCAGTTTTGTGACAGAGCAGAACTGGGACTCGCTGGAAGTATTTGATGGTGCAGATAACACTGTA ACCATGCTGGGGAGTTTCTCAGGAACAACCGTGCCTGCCCTTCTGAACAGCACCTCCAACCAGCTCTACCTTCATTTCTACTCAGATATC AGCGTATCTGCAGCTGGCTTCCACTTGGAGTACAAAACGGTGGGCCTGAGCAGTTGTCCGGAACCTGCTGTGCCCAGTAACGGGGTGAAG ACTGGCGAGCGCTACTTGGTGAATGATGTGGTGTCTTTCCAGTGTGAGCCGGGATATGCCCTCCAGGGCCACGCCCACATCTCCTGCATG CCCGGAACAGTGCGGCGATGGAACTACCCTCCTCCACTCTGTATTGCACAGTGTGGGGGAACAGTGGAGGAGATGGAGGGGGTGATCCTG AGCCCCGGCTTCCCAGGCAACTACCCCAGTAACATGGACTGCTCCTGGAAAATAGCACTGCCCGTGGGCTTTGGAGCTCACATCCAGTTC CTGAACTTCTCCACCGAGCCCAACCACGACTACATAGAAATCCGGAATGGCCCCTATGAGACCAGCCGCATGATGGGAAGATTCAGTGGA AGCGAGCTTCCAAGCTCCCTCCTCTCCACGTCCCACGAGACCACCGTGTATTTCCACAGCGACCACTCCCAGAATCGGCCAGGATTCAAG CTGGAGTATCAGGCCTATGAACTTCAAGAGTGCCCAGACCCAGAGCCCTTTGCCAATGGCATTGTGAGGGGAGCTGGCTACAACGTGGGA CAATCAGTGACCTTCGAGTGCCTCCCGGGGTATCAATTGACTGGCCACCCTGTCCTCACGTGTCAACATGGCACCAACCGGAACTGGGAC CACCCCCTGCCCAAGTGTGAAGTCCCTTGTGGCGGGAACATCACTTCTTCCAACGGCACTGTGTACTCCCCGGGGTTCCCTAGCCCGTAC TCCAGCTCCCAGGACTGTGTCTGGCTGATCACCGTGCCCATTGGCCATGGCGTCCGCCTCAACCTCAGCCTGCTGCAGACAGAGCCCTCT GGAGATTTCATCACCATCTGGGATGGGCCACAGCAAACAGCACCACGGCTCGGCGTCTTCACCCGGAGCATGGCCAAGAAAACAGTGCAG AGTTCATCCAACCAGGTCCTGCTCAAGTTCCACCGTGATGCAGCCACAGGGGGGATCTTCGCCATAGCTTTCTCCGGGCACTTGGCAGCT GTTTGTACATTGTGACACCCCTCCACGCACACATCTGCCCCCCAGCCACAGAAGCTTGGACCAGAGGTGGACACCTGAGCTGACTGCAGC AGGGGCAATCAGATGTTCTCTCTTGGGAAGTTGAAATAGGACCCAAGAGATTCTACTTTTGCCTGGACCCATCTCCTGAAAAGATAAAAA TCCAAGTGCAATGGATTGCTGCTCTTCTACTTTCCATGTGGACCAAAAAGTAGAACAATCCTATGTGCAGAAAGAGAATGATTGAGAAGT GGAAAAATTTCCTTGGTTTCTGATGGCCCTTCAGTTCCTCGTCCTCTACCTTTGTGAAGTCTGGCTGCAAACCCACCCTTGGGTTCTCTC TTCTCTGAGAGGCTTTTTTGCTTATTCTAGCCTGAATTGATTTATTTACATCCAAAGGTTCCCAAGGAATACAACAACCTAGGACCCAGC AATCCTACTTCTGGGAATTATGCAAAGATATGTGCATGAAGATATTGCTTGATATGTTATAACAGGGAAATTAGAAATAATCTAAATGTA AAAATAGTAAGAGATTAGGTATTATAAATTTAAAGTGTATACTCAGAGAGAGAGAGATAGGGAAAGATACAGTCATTACAAATCATTCAT >In-frame_ENST00000369543_ENST00000373380_TCGA-52-7809-01A_TRIM33_chr1_114948032_-_CSMD2_chr1_34128692_length(amino acids)=1894AA_start in transcript=0_stop in transcript=5684 LRLGLGAAAAATRAAGGAGRSGGFKEENMAENKGGGEAESGGGGSGSAPVTAGAAGPAAQEAEPPLTAVLVEEEEEEGGRAGAEGGAAGP DDGGVAAASSGSAQAASSPAASVGTGVAGGAVSTPAPAPASAPAPGPSAGPPPGPPASLLDTCAVCQQSLQSRREAEPKLLPCLHSFCLR CLPEPERQLSVPIPGGSNGDIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSEAPSSSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCI EAHQRVKFTKDHLIRKKEDVSESVGASGQRPVFCPVHKQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKLLE KKNYVHFAATQVQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSLLQQLENVTKERQMKLLQQQNDITGLSRQVKHVMNFTNWAIAS GSSTALLYSKRLITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNVVNLGNLVIESKPAPGYTPNVVVGQVPPGTNHISKTPGQINLA QLRLQHMQQQVYAQKHQQLQQMRMQQPPAPVPTTTTTTQQHPRQAAPQMLQQQPPRLISVQTMQRGNMNCGAFQAHQMRLAQNAARIPGI PRHSGPQYSMMQPHLQRQHSNPGHAGPFPVVSVHNTTINPTSPTTATMANANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLEDAG SSSLDNLLSRYISGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEKTSLSFKSDQVKVKQEPGTE DEICSFSGGVKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDALASLENHVKIEPADMNESCKQSGLSSLVNGKSPIRSLMHRSA RIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPRLHFLVFDTEEVHDVLRIWDGPVESGVLLKELSGPALPKD LHSTFNSVVLQFSTDFFTSKQGFAIQFSVSTATSCNDPGIPQNGSRSGDSWEAGDSTVFQCDPGYALQGSAEISCVKIENRFFWQPSPPT CIAPCGGDLTGPSGVILSPNYPEPYPPGKECDWKVTVSPDYVIALVFNIFNLEPGYDFLHIYDGRDSLSPLIGSFYGSQLPGRIESSSNS LFLAFRSDASVSNAGFVIDYTENPRESCFDPGSIKNGTRVGSDLKLGSSVTYYCHGGYEVEGTSTLSCILGPDGKPVWNNPRPVCTAPCG GQYVGSDGVVLSPNYPQNYTSGQICLYFVTVPKDYVVFGQFAFFHTALNDVVEVHDGHSQHSRLLSSLSGSHTGESLPLATSNQVLIKFS AKGLAPARGFHFVYQAVPRTSATQCSSVPEPRYGKRLGSDFSVGAIVRFECNSGYALQGSPEIECLPVPGALAQWNVSAPTCVVPCGGNL TERRGTILSPGFPEPYLNSLNCVWKIVVPEGAGIQIQVVSFVTEQNWDSLEVFDGADNTVTMLGSFSGTTVPALLNSTSNQLYLHFYSDI SVSAAGFHLEYKTVGLSSCPEPAVPSNGVKTGERYLVNDVVSFQCEPGYALQGHAHISCMPGTVRRWNYPPPLCIAQCGGTVEEMEGVIL SPGFPGNYPSNMDCSWKIALPVGFGAHIQFLNFSTEPNHDYIEIRNGPYETSRMMGRFSGSELPSSLLSTSHETTVYFHSDHSQNRPGFK LEYQAYELQECPDPEPFANGIVRGAGYNVGQSVTFECLPGYQLTGHPVLTCQHGTNRNWDHPLPKCEVPCGGNITSSNGTVYSPGFPSPY SSSQDCVWLITVPIGHGVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFHRDAATGGIFAIAFSGHLAA -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for TRIM33-CSMD2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for TRIM33-CSMD2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for TRIM33-CSMD2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | TRIM33 | C0238463 | Papillary thyroid carcinoma | 2 | ORPHANET |
Tgene | CSMD2 | C0011570 | Mental Depression | 1 | PSYGENET |
Tgene | CSMD2 | C0011581 | Depressive disorder | 1 | PSYGENET |
Tgene | CSMD2 | C0036341 | Schizophrenia | 1 | PSYGENET |