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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:BCAT2-TMEM143 (FusionGDB2 ID:9361) |
Fusion Gene Summary for BCAT2-TMEM143 |
Fusion gene summary |
Fusion gene information | Fusion gene name: BCAT2-TMEM143 | Fusion gene ID: 9361 | Hgene | Tgene | Gene symbol | BCAT2 | TMEM143 | Gene ID | 587 | 55260 |
Gene name | branched chain amino acid transaminase 2 | transmembrane protein 143 | |
Synonyms | BCAM|BCATM|BCT2|PP18 | - | |
Cytomap | 19q13.33 | 19q13.33 | |
Type of gene | protein-coding | protein-coding | |
Description | branched-chain-amino-acid aminotransferase, mitochondrialbranched chain amino-acid transaminase 2, mitochondrialbranched chain aminotransferase 2, mitochondrialplacental protein 18 | transmembrane protein 143 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | O15382 | . | |
Ensembl transtripts involved in fusion gene | ENST00000545387, ENST00000402551, ENST00000316273, ENST00000597011, ENST00000599246, ENST00000598162, ENST00000601496, | ENST00000293261, ENST00000377431, ENST00000435956, ENST00000436660, ENST00000541566, ENST00000598012, | |
Fusion gene scores | * DoF score | 10 X 9 X 9=810 | 2 X 3 X 2=12 |
# samples | 11 | 3 | |
** MAII score | log2(11/810*10)=-2.88041838424733 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/12*10)=1.32192809488736 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: BCAT2 [Title/Abstract] AND TMEM143 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | BCAT2(49314240)-TMEM143(48848611), # samples:1 BCAT2(49302932)-TMEM143(48846066), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | BCAT2-TMEM143 seems lost the major protein functional domain in Hgene partner, which is a cell metabolism gene due to the frame-shifted ORF. BCAT2-TMEM143 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. BCAT2-TMEM143 seems lost the major protein functional domain in Hgene partner, which is a IUPHAR drug target due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene breakpoints across BCAT2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across TMEM143 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | MESO | TCGA-TS-A7P7 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
ChimerDB4 | CESC | TCGA-IR-A3LK-01A | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
Top |
Fusion Gene ORF analysis for BCAT2-TMEM143 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000545387 | ENST00000293261 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000545387 | ENST00000377431 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000545387 | ENST00000435956 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000545387 | ENST00000436660 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000545387 | ENST00000541566 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000545387 | ENST00000598012 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5UTR-3CDS | ENST00000402551 | ENST00000293261 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5UTR-intron | ENST00000402551 | ENST00000377431 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5UTR-intron | ENST00000402551 | ENST00000435956 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5UTR-intron | ENST00000402551 | ENST00000436660 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5UTR-intron | ENST00000402551 | ENST00000541566 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5UTR-intron | ENST00000402551 | ENST00000598012 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
In-frame | ENST00000316273 | ENST00000293261 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000316273 | ENST00000377431 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000316273 | ENST00000435956 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000316273 | ENST00000436660 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000316273 | ENST00000541566 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000316273 | ENST00000598012 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
intron-3CDS | ENST00000597011 | ENST00000293261 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
intron-intron | ENST00000597011 | ENST00000377431 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
intron-intron | ENST00000597011 | ENST00000435956 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
intron-intron | ENST00000597011 | ENST00000436660 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
intron-intron | ENST00000597011 | ENST00000541566 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
intron-intron | ENST00000597011 | ENST00000598012 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
In-frame | ENST00000599246 | ENST00000293261 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000599246 | ENST00000377431 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000599246 | ENST00000435956 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000599246 | ENST00000436660 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000599246 | ENST00000541566 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000599246 | ENST00000598012 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
In-frame | ENST00000598162 | ENST00000293261 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000598162 | ENST00000377431 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000598162 | ENST00000435956 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000598162 | ENST00000436660 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000598162 | ENST00000541566 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5CDS-intron | ENST00000598162 | ENST00000598012 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5UTR-3CDS | ENST00000601496 | ENST00000293261 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5UTR-intron | ENST00000601496 | ENST00000377431 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5UTR-intron | ENST00000601496 | ENST00000435956 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5UTR-intron | ENST00000601496 | ENST00000436660 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5UTR-intron | ENST00000601496 | ENST00000541566 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
5UTR-intron | ENST00000601496 | ENST00000598012 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - |
In-frame | ENST00000545387 | ENST00000293261 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000545387 | ENST00000377431 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000545387 | ENST00000435956 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000545387 | ENST00000436660 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000545387 | ENST00000541566 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
5CDS-intron | ENST00000545387 | ENST00000598012 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
Frame-shift | ENST00000402551 | ENST00000293261 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
Frame-shift | ENST00000402551 | ENST00000377431 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
Frame-shift | ENST00000402551 | ENST00000435956 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
Frame-shift | ENST00000402551 | ENST00000436660 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
Frame-shift | ENST00000402551 | ENST00000541566 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
5CDS-intron | ENST00000402551 | ENST00000598012 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000316273 | ENST00000293261 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000316273 | ENST00000377431 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000316273 | ENST00000435956 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000316273 | ENST00000436660 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000316273 | ENST00000541566 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
5CDS-intron | ENST00000316273 | ENST00000598012 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
Frame-shift | ENST00000597011 | ENST00000293261 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
Frame-shift | ENST00000597011 | ENST00000377431 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
Frame-shift | ENST00000597011 | ENST00000435956 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
Frame-shift | ENST00000597011 | ENST00000436660 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
Frame-shift | ENST00000597011 | ENST00000541566 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
5CDS-intron | ENST00000597011 | ENST00000598012 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000599246 | ENST00000293261 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000599246 | ENST00000377431 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000599246 | ENST00000435956 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000599246 | ENST00000436660 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000599246 | ENST00000541566 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
5CDS-intron | ENST00000599246 | ENST00000598012 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000598162 | ENST00000293261 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000598162 | ENST00000377431 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000598162 | ENST00000435956 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000598162 | ENST00000436660 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
In-frame | ENST00000598162 | ENST00000541566 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
5CDS-intron | ENST00000598162 | ENST00000598012 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
intron-3CDS | ENST00000601496 | ENST00000293261 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
intron-3CDS | ENST00000601496 | ENST00000377431 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
intron-3CDS | ENST00000601496 | ENST00000435956 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
intron-3CDS | ENST00000601496 | ENST00000436660 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
intron-3CDS | ENST00000601496 | ENST00000541566 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
intron-intron | ENST00000601496 | ENST00000598012 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000545387 | BCAT2 | chr19 | 49314240 | - | ENST00000293261 | TMEM143 | chr19 | 48848611 | - | 1903 | 29 | 5 | 1039 | 344 |
ENST00000316273 | BCAT2 | chr19 | 49314240 | - | ENST00000293261 | TMEM143 | chr19 | 48848611 | - | 1911 | 37 | 13 | 1047 | 344 |
ENST00000599246 | BCAT2 | chr19 | 49314240 | - | ENST00000293261 | TMEM143 | chr19 | 48848611 | - | 1920 | 46 | 22 | 1056 | 344 |
ENST00000598162 | BCAT2 | chr19 | 49314240 | - | ENST00000293261 | TMEM143 | chr19 | 48848611 | - | 1918 | 44 | 20 | 1054 | 344 |
ENST00000545387 | BCAT2 | chr19 | 49302932 | - | ENST00000293261 | TMEM143 | chr19 | 48846066 | - | 1972 | 424 | 5 | 1108 | 367 |
ENST00000545387 | BCAT2 | chr19 | 49302932 | - | ENST00000377431 | TMEM143 | chr19 | 48846066 | - | 1971 | 424 | 5 | 1108 | 367 |
ENST00000545387 | BCAT2 | chr19 | 49302932 | - | ENST00000435956 | TMEM143 | chr19 | 48846066 | - | 1967 | 424 | 5 | 1108 | 367 |
ENST00000545387 | BCAT2 | chr19 | 49302932 | - | ENST00000436660 | TMEM143 | chr19 | 48846066 | - | 1387 | 424 | 5 | 1108 | 367 |
ENST00000545387 | BCAT2 | chr19 | 49302932 | - | ENST00000541566 | TMEM143 | chr19 | 48846066 | - | 1222 | 424 | 5 | 1108 | 367 |
ENST00000316273 | BCAT2 | chr19 | 49302932 | - | ENST00000293261 | TMEM143 | chr19 | 48846066 | - | 2256 | 708 | 13 | 1392 | 459 |
ENST00000316273 | BCAT2 | chr19 | 49302932 | - | ENST00000377431 | TMEM143 | chr19 | 48846066 | - | 2255 | 708 | 13 | 1392 | 459 |
ENST00000316273 | BCAT2 | chr19 | 49302932 | - | ENST00000435956 | TMEM143 | chr19 | 48846066 | - | 2251 | 708 | 13 | 1392 | 459 |
ENST00000316273 | BCAT2 | chr19 | 49302932 | - | ENST00000436660 | TMEM143 | chr19 | 48846066 | - | 1671 | 708 | 13 | 1392 | 459 |
ENST00000316273 | BCAT2 | chr19 | 49302932 | - | ENST00000541566 | TMEM143 | chr19 | 48846066 | - | 1506 | 708 | 13 | 1392 | 459 |
ENST00000599246 | BCAT2 | chr19 | 49302932 | - | ENST00000293261 | TMEM143 | chr19 | 48846066 | - | 1989 | 441 | 22 | 1125 | 367 |
ENST00000599246 | BCAT2 | chr19 | 49302932 | - | ENST00000377431 | TMEM143 | chr19 | 48846066 | - | 1988 | 441 | 22 | 1125 | 367 |
ENST00000599246 | BCAT2 | chr19 | 49302932 | - | ENST00000435956 | TMEM143 | chr19 | 48846066 | - | 1984 | 441 | 22 | 1125 | 367 |
ENST00000599246 | BCAT2 | chr19 | 49302932 | - | ENST00000436660 | TMEM143 | chr19 | 48846066 | - | 1404 | 441 | 22 | 1125 | 367 |
ENST00000599246 | BCAT2 | chr19 | 49302932 | - | ENST00000541566 | TMEM143 | chr19 | 48846066 | - | 1239 | 441 | 22 | 1125 | 367 |
ENST00000598162 | BCAT2 | chr19 | 49302932 | - | ENST00000293261 | TMEM143 | chr19 | 48846066 | - | 2263 | 715 | 20 | 1399 | 459 |
ENST00000598162 | BCAT2 | chr19 | 49302932 | - | ENST00000377431 | TMEM143 | chr19 | 48846066 | - | 2262 | 715 | 20 | 1399 | 459 |
ENST00000598162 | BCAT2 | chr19 | 49302932 | - | ENST00000435956 | TMEM143 | chr19 | 48846066 | - | 2258 | 715 | 20 | 1399 | 459 |
ENST00000598162 | BCAT2 | chr19 | 49302932 | - | ENST00000436660 | TMEM143 | chr19 | 48846066 | - | 1678 | 715 | 20 | 1399 | 459 |
ENST00000598162 | BCAT2 | chr19 | 49302932 | - | ENST00000541566 | TMEM143 | chr19 | 48846066 | - | 1513 | 715 | 20 | 1399 | 459 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000545387 | ENST00000293261 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - | 0.025999602 | 0.97400045 |
ENST00000316273 | ENST00000293261 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - | 0.025938332 | 0.9740616 |
ENST00000599246 | ENST00000293261 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - | 0.025524965 | 0.9744751 |
ENST00000598162 | ENST00000293261 | BCAT2 | chr19 | 49314240 | - | TMEM143 | chr19 | 48848611 | - | 0.025576476 | 0.97442347 |
ENST00000545387 | ENST00000293261 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.037864614 | 0.9621354 |
ENST00000545387 | ENST00000377431 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.037870314 | 0.9621297 |
ENST00000545387 | ENST00000435956 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.03706696 | 0.96293306 |
ENST00000545387 | ENST00000436660 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.03639866 | 0.9636013 |
ENST00000545387 | ENST00000541566 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.031648032 | 0.9683519 |
ENST00000316273 | ENST00000293261 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.06524966 | 0.9347503 |
ENST00000316273 | ENST00000377431 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.06544755 | 0.93455243 |
ENST00000316273 | ENST00000435956 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.06534206 | 0.93465793 |
ENST00000316273 | ENST00000436660 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.07204257 | 0.9279574 |
ENST00000316273 | ENST00000541566 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.066848874 | 0.9331511 |
ENST00000599246 | ENST00000293261 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.0367013 | 0.9632987 |
ENST00000599246 | ENST00000377431 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.03669456 | 0.9633054 |
ENST00000599246 | ENST00000435956 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.036110986 | 0.96388894 |
ENST00000599246 | ENST00000436660 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.03482218 | 0.9651778 |
ENST00000599246 | ENST00000541566 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.030770099 | 0.9692299 |
ENST00000598162 | ENST00000293261 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.062760495 | 0.93723947 |
ENST00000598162 | ENST00000377431 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.063009314 | 0.93699074 |
ENST00000598162 | ENST00000435956 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.063043885 | 0.93695605 |
ENST00000598162 | ENST00000436660 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.06929436 | 0.9307056 |
ENST00000598162 | ENST00000541566 | BCAT2 | chr19 | 49302932 | - | TMEM143 | chr19 | 48846066 | - | 0.06531175 | 0.9346882 |
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Fusion Genomic Features for BCAT2-TMEM143 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for BCAT2-TMEM143 |
Go to FGviewer for the breakpoints of chr19:49314240-chr19:48848611 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
BCAT2 | . |
FUNCTION: Catalyzes the first reaction in the catabolism of the essential branched chain amino acids leucine, isoleucine, and valine. May also function as a transporter of branched chain alpha-keto acids. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | TMEM143 | chr19:49302932 | chr19:48846066 | ENST00000293261 | 4 | 8 | 280_300 | 231.66666666666666 | 460.0 | Transmembrane | Helical | |
Tgene | TMEM143 | chr19:49302932 | chr19:48846066 | ENST00000293261 | 4 | 8 | 301_321 | 231.66666666666666 | 460.0 | Transmembrane | Helical | |
Tgene | TMEM143 | chr19:49302932 | chr19:48846066 | ENST00000377431 | 2 | 6 | 280_300 | 131.66666666666666 | 360.0 | Transmembrane | Helical | |
Tgene | TMEM143 | chr19:49302932 | chr19:48846066 | ENST00000377431 | 2 | 6 | 301_321 | 131.66666666666666 | 360.0 | Transmembrane | Helical | |
Tgene | TMEM143 | chr19:49314240 | chr19:48848611 | ENST00000293261 | 2 | 8 | 280_300 | 123.0 | 460.0 | Transmembrane | Helical | |
Tgene | TMEM143 | chr19:49314240 | chr19:48848611 | ENST00000293261 | 2 | 8 | 301_321 | 123.0 | 460.0 | Transmembrane | Helical | |
Tgene | TMEM143 | chr19:49314240 | chr19:48848611 | ENST00000377431 | 0 | 6 | 280_300 | 0 | 360.0 | Transmembrane | Helical | |
Tgene | TMEM143 | chr19:49314240 | chr19:48848611 | ENST00000377431 | 0 | 6 | 301_321 | 0 | 360.0 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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Fusion Gene Sequence for BCAT2-TMEM143 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000545387_ENST00000293261_TCGA-TS-A7P7_BCAT2_chr19_49314240_-_TMEM143_chr19_48848611_length(transcript)=1903nt_BP=29nt GGATCATGGCCGCAGCCGCTCTGGGGCAGGCCTTATATGACCCCATCAACCCTGACAGGGAGACCCTCGATCAGCCATCACTAACGGATC CCCAGCGTCTGTCTAATGAGCAGGAGGTGCTTCGGGCTCTGGAGCCCCTGCTGGCCCAGGCCAACTTCTCCCCGCTGTCTGAGGACACCC TGGCCTACGCGCTGGTGGTCCACCACCCTCAGGATGAGGTCCAGGTGACAGTAAATTTGGATCAGTATGTCTACATTCACTTCTGGGCCC TGGGCCAGCGAGTCGGGCAGATGCCCCTGAAGTCCAGCGTGGGCTCCAGGCGTGGCTTCTTCACCAAGCTGCCCCCTGCGGAGAGGAGAT ACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGC AGCTGCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCG TCAACGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCT CCAAGATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGC TCAGCGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTC AAGGCTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACG GAACTCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTC CGATCACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACT AAGCCCCGCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCT GCACTGTGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGA TTTAGCTCTGCTTCTGTTCCATTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAA TCACAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCCCTCCCGAGACTATATATCATTGTCTTTTTCA GCCCGCTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATC AACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGGAAACCTGATCTTGCTATCAATTGCTGCTGCTTAA ATGGCAGGCCAACTGGTCAGCTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCC TCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTTTCTACAGAAACTACCT CGGTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATG >In-frame_ENST00000545387_ENST00000293261_TCGA-TS-A7P7_BCAT2_chr19_49314240_-_TMEM143_chr19_48848611_length(amino acids)=344AA_start in transcript=5_stop in transcript=1039 MAAAALGQALYDPINPDRETLDQPSLTDPQRLSNEQEVLRALEPLLAQANFSPLSEDTLAYALVVHHPQDEVQVTVNLDQYVYIHFWALG QRVGQMPLKSSVGSRRGFFTKLPPAERRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELKVRTPTLQRALLNLMLVVSGVAIFVN VGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALRAQDEHTKEALLAHSFLARRPGGTQG -------------------------------------------------------------- >In-frame_ENST00000316273_ENST00000293261_TCGA-TS-A7P7_BCAT2_chr19_49314240_-_TMEM143_chr19_48848611_length(transcript)=1911nt_BP=37nt CGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGGCCTTATATGACCCCATCAACCCTGACAGGGAGACCCTCGATCAGCCATCACT AACGGATCCCCAGCGTCTGTCTAATGAGCAGGAGGTGCTTCGGGCTCTGGAGCCCCTGCTGGCCCAGGCCAACTTCTCCCCGCTGTCTGA GGACACCCTGGCCTACGCGCTGGTGGTCCACCACCCTCAGGATGAGGTCCAGGTGACAGTAAATTTGGATCAGTATGTCTACATTCACTT CTGGGCCCTGGGCCAGCGAGTCGGGCAGATGCCCCTGAAGTCCAGCGTGGGCTCCAGGCGTGGCTTCTTCACCAAGCTGCCCCCTGCGGA GAGGAGATACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGG CCTGGAGCAGCTGCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGC GATCTTCGTCAACGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCT GCGGGCCTCCAAGATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTC GGAGCTGCTCAGCGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGG GGGCACTCAAGGCTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGAC CTTCAACGGAACTCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCC AGTGGCTCCGATCACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGC TAGGAACTAAGCCCCGCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTA TTTTTGCTGCACTGTGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAAT CAAAGCGATTTAGCTCTGCTTCTGTTCCATTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTG TCTGCCAATCACAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCCCTCCCGAGACTATATATCATTGT CTTTTTCAGCCCGCTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGG GTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGGAAACCTGATCTTGCTATCAATTGCTG CTGCTTAAATGGCAGGCCAACTGGTCAGCTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGA AACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTTTCTACAGA AACTACCTCGGTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAAT >In-frame_ENST00000316273_ENST00000293261_TCGA-TS-A7P7_BCAT2_chr19_49314240_-_TMEM143_chr19_48848611_length(amino acids)=344AA_start in transcript=13_stop in transcript=1047 MAAAALGQALYDPINPDRETLDQPSLTDPQRLSNEQEVLRALEPLLAQANFSPLSEDTLAYALVVHHPQDEVQVTVNLDQYVYIHFWALG QRVGQMPLKSSVGSRRGFFTKLPPAERRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELKVRTPTLQRALLNLMLVVSGVAIFVN VGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALRAQDEHTKEALLAHSFLARRPGGTQG -------------------------------------------------------------- >In-frame_ENST00000599246_ENST00000293261_TCGA-TS-A7P7_BCAT2_chr19_49314240_-_TMEM143_chr19_48848611_length(transcript)=1920nt_BP=46nt ACAGTTACGCGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGGCCTTATATGACCCCATCAACCCTGACAGGGAGACCCTCGATCA GCCATCACTAACGGATCCCCAGCGTCTGTCTAATGAGCAGGAGGTGCTTCGGGCTCTGGAGCCCCTGCTGGCCCAGGCCAACTTCTCCCC GCTGTCTGAGGACACCCTGGCCTACGCGCTGGTGGTCCACCACCCTCAGGATGAGGTCCAGGTGACAGTAAATTTGGATCAGTATGTCTA CATTCACTTCTGGGCCCTGGGCCAGCGAGTCGGGCAGATGCCCCTGAAGTCCAGCGTGGGCTCCAGGCGTGGCTTCTTCACCAAGCTGCC CCCTGCGGAGAGGAGATACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCC GCTGGAAGGCCTGGAGCAGCTGCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTC CGGCGTGGCGATCTTCGTCAACGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTT CATGGGCCTGCGGGCCTCCAAGATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTC CAACAACTCGGAGCTGCTCAGCGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCG GCGGCCAGGGGGCACTCAAGGCTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTG TGAGGTGACCTTCAACGGAACTCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAA ACTAGACCCAGTGGCTCCGATCACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAG TCAGCAGGCTAGGAACTAAGCCCCGCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGAC AGGTGATTATTTTTGCTGCACTGTGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGA ACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCATTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAG CTGAGGGTGTCTGCCAATCACAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCCCTCCCGAGACTATA TATCATTGTCTTTTTCAGCCCGCTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGAC AGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGGAAACCTGATCTTGCTAT CAATTGCTGCTGCTTAAATGGCAGGCCAACTGGTCAGCTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGG TGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCT TTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCC >In-frame_ENST00000599246_ENST00000293261_TCGA-TS-A7P7_BCAT2_chr19_49314240_-_TMEM143_chr19_48848611_length(amino acids)=344AA_start in transcript=22_stop in transcript=1056 MAAAALGQALYDPINPDRETLDQPSLTDPQRLSNEQEVLRALEPLLAQANFSPLSEDTLAYALVVHHPQDEVQVTVNLDQYVYIHFWALG QRVGQMPLKSSVGSRRGFFTKLPPAERRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELKVRTPTLQRALLNLMLVVSGVAIFVN VGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALRAQDEHTKEALLAHSFLARRPGGTQG -------------------------------------------------------------- >In-frame_ENST00000598162_ENST00000293261_TCGA-TS-A7P7_BCAT2_chr19_49314240_-_TMEM143_chr19_48848611_length(transcript)=1918nt_BP=44nt AGTTACGCGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGGCCTTATATGACCCCATCAACCCTGACAGGGAGACCCTCGATCAGC CATCACTAACGGATCCCCAGCGTCTGTCTAATGAGCAGGAGGTGCTTCGGGCTCTGGAGCCCCTGCTGGCCCAGGCCAACTTCTCCCCGC TGTCTGAGGACACCCTGGCCTACGCGCTGGTGGTCCACCACCCTCAGGATGAGGTCCAGGTGACAGTAAATTTGGATCAGTATGTCTACA TTCACTTCTGGGCCCTGGGCCAGCGAGTCGGGCAGATGCCCCTGAAGTCCAGCGTGGGCTCCAGGCGTGGCTTCTTCACCAAGCTGCCCC CTGCGGAGAGGAGATACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGC TGGAAGGCCTGGAGCAGCTGCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCG GCGTGGCGATCTTCGTCAACGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCA TGGGCCTGCGGGCCTCCAAGATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCA ACAACTCGGAGCTGCTCAGCGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGC GGCCAGGGGGCACTCAAGGCTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTG AGGTGACCTTCAACGGAACTCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAAC TAGACCCAGTGGCTCCGATCACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTC AGCAGGCTAGGAACTAAGCCCCGCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAG GTGATTATTTTTGCTGCACTGTGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAAC AGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCATTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCT GAGGGTGTCTGCCAATCACAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCCCTCCCGAGACTATATA TCATTGTCTTTTTCAGCCCGCTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAG CTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGGAAACCTGATCTTGCTATCA ATTGCTGCTGCTTAAATGGCAGGCCAACTGGTCAGCTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTG AACCAGAAACCACCCTCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTTT CTACAGAAACTACCTCGGTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCA >In-frame_ENST00000598162_ENST00000293261_TCGA-TS-A7P7_BCAT2_chr19_49314240_-_TMEM143_chr19_48848611_length(amino acids)=344AA_start in transcript=20_stop in transcript=1054 MAAAALGQALYDPINPDRETLDQPSLTDPQRLSNEQEVLRALEPLLAQANFSPLSEDTLAYALVVHHPQDEVQVTVNLDQYVYIHFWALG QRVGQMPLKSSVGSRRGFFTKLPPAERRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELKVRTPTLQRALLNLMLVVSGVAIFVN VGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALRAQDEHTKEALLAHSFLARRPGGTQG -------------------------------------------------------------- >In-frame_ENST00000545387_ENST00000293261_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=1972nt_BP=424nt GGATCATGGCCGCAGCCGCTCTGGGGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTTCCGCCCCT GGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGAGTGCATCCGCCGGC TCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCATTGGGAACGAGCCCTCGCTGG GTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTCCGTGACCCCGGTCTCCC TCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGATACTTTAAGCGGGTGGTCCTGG CAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCTGCTGCCGGAGCTGAAGG TGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAACGTGGGCATGGTGGTGC TAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCTCCAAGATGTTCGGGCAGCGGC GCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAGCGCCCTGGCCCTGCGCG CGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGGCTCGCCCGAAGAGACCT CCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAACTCGGGCCCTGGCGCATC TGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTCCGATCACTTCCGAGCCCCCGC AAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACTAAGCCCCGCCTCCTTCACGAC AGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAAGCAAAG CAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCA TTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGCTGCTCAGCTCTGGC TTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCCCTCCCGAGACTATATATCATTGTCTTTTTCAGCCCGCTCCGGGCAAACTGCC CATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTC GCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGGAAACCTGATCTTGCTATCAATTGCTGCTGCTTAAATGGCAGGCCAACTGGTCAGC TGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCC AACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCAC >In-frame_ENST00000545387_ENST00000293261_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=367AA_start in transcript=5_stop in transcript=1108 MAAAALGQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGV SQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELKVR TPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALRAQ DEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPPQA -------------------------------------------------------------- >In-frame_ENST00000545387_ENST00000377431_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=1971nt_BP=424nt GGATCATGGCCGCAGCCGCTCTGGGGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTTCCGCCCCT GGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGAGTGCATCCGCCGGC TCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCATTGGGAACGAGCCCTCGCTGG GTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTCCGTGACCCCGGTCTCCC TCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGATACTTTAAGCGGGTGGTCCTGG CAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCTGCTGCCGGAGCTGAAGG TGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAACGTGGGCATGGTGGTGC TAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCTCCAAGATGTTCGGGCAGCGGC GCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAGCGCCCTGGCCCTGCGCG CGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGGCTCGCCCGAAGAGACCT CCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAACTCGGGCCCTGGCGCATC TGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTCCGATCACTTCCGAGCCCCCGC AAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACTAAGCCCCGCCTCCTTCACGAC AGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAAGCAAAG CAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCA TTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGCTGCTCAGCTCTGGC TTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCCCTCCCGAGACTATATATCATTGTCTTTTTCAGCCCGCTCCGGGCAAACTGCC CATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTC GCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGGAAACCTGATCTTGCTATCAATTGCTGCTGCTTAAATGGCAGGCCAACTGGTCAGC TGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCC AACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCAC >In-frame_ENST00000545387_ENST00000377431_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=367AA_start in transcript=5_stop in transcript=1108 MAAAALGQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGV SQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELKVR TPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALRAQ DEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPPQA -------------------------------------------------------------- >In-frame_ENST00000545387_ENST00000435956_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=1967nt_BP=424nt GGATCATGGCCGCAGCCGCTCTGGGGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTTCCGCCCCT GGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGAGTGCATCCGCCGGC TCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCATTGGGAACGAGCCCTCGCTGG GTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTCCGTGACCCCGGTCTCCC TCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGATACTTTAAGCGGGTGGTCCTGG CAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCTGCTGCCGGAGCTGAAGG TGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAACGTGGGCATGGTGGTGC TAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCTCCAAGATGTTCGGGCAGCGGC GCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAGCGCCCTGGCCCTGCGCG CGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGGCTCGCCCGAAGAGACCT CCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAACTCGGGCCCTGGCGCATC TGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTCCGATCACTTCCGAGCCCCCGC AAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACTAAGCCCCGCCTCCTTCACGAC AGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAAGCAAAG CAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCA TTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGCTGCTCAGCTCTGGC TTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCCCTCCCGAGACTATATATCATTGTCTTTTTCAGCCCGCTCCGGGCAAACTGCC CATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTGGGCAGCCGGTTGTC GCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGGAAACCTGATCTTGCTATCAATTGCTGCTGCTTAAATGGCAGGCCAACTGGTCAGC TGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCCC AACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTGGATCTCCCCACCAC >In-frame_ENST00000545387_ENST00000435956_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=367AA_start in transcript=5_stop in transcript=1108 MAAAALGQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGV SQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELKVR TPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALRAQ DEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPPQA -------------------------------------------------------------- >In-frame_ENST00000545387_ENST00000436660_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=1387nt_BP=424nt GGATCATGGCCGCAGCCGCTCTGGGGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTTCCGCCCCT GGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGAGTGCATCCGCCGGC TCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCATTGGGAACGAGCCCTCGCTGG GTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTCCGTGACCCCGGTCTCCC TCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGATACTTTAAGCGGGTGGTCCTGG CAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCTGCTGCCGGAGCTGAAGG TGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAACGTGGGCATGGTGGTGC TAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCTCCAAGATGTTCGGGCAGCGGC GCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAGCGCCCTGGCCCTGCGCG CGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGGCTCGCCCGAAGAGACCT CCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAACTCGGGCCCTGGCGCATC TGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTCCGATCACTTCCGAGCCCCCGC AAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACTAAGCCCCGCCTCCTTCACGAC AGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGTGTGCTTAAGCAAAG CAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCTCTGCTTCTGTTCCA >In-frame_ENST00000545387_ENST00000436660_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=367AA_start in transcript=5_stop in transcript=1108 MAAAALGQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGV SQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELKVR TPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALRAQ DEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPPQA -------------------------------------------------------------- >In-frame_ENST00000545387_ENST00000541566_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=1222nt_BP=424nt GGATCATGGCCGCAGCCGCTCTGGGGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTTCCGCCCCT GGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGAGTGCATCCGCCGGC TCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCATTGGGAACGAGCCCTCGCTGG GTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTCCGTGACCCCGGTCTCCC TCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGATACTTTAAGCGGGTGGTCCTGG CAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCTGCTGCCGGAGCTGAAGG TGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAACGTGGGCATGGTGGTGC TAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCTCCAAGATGTTCGGGCAGCGGC GCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAGCGCCCTGGCCCTGCGCG CGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGGCTCGCCCGAAGAGACCT CCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAACTCGGGCCCTGGCGCATC TGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTCCGATCACTTCCGAGCCCCCGC AAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACTAAGCCCCGCCTCCTTCACGAC >In-frame_ENST00000545387_ENST00000541566_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=367AA_start in transcript=5_stop in transcript=1108 MAAAALGQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGV SQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELKVR TPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALRAQ DEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPPQA -------------------------------------------------------------- >In-frame_ENST00000316273_ENST00000293261_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=2256nt_BP=708nt CGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGATCTGGGCACGAAAGCTTCTCTCTGTCCCTTGGCTTCTGTGTGGTCCCAGAAG ATATGCCTCCTCCAGTTTCAAGGCTGCAGACCTGCAGCTGGAAATGACACAGAAGCCTCATAAGAAGCCTGGCCCCGGCGAGCCCCTGGT GTTTGGGAAGACATTTACCGACCACATGCTGATGGTGGAATGGAATGACAAGGGCTGGGGCCAGCCCCGAATCCAGCCCTTCCAGAACCT CACGCTGCACCCAGCCTCCTCCAGCCTCCACTACTCCCTGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCG CCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGA GTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCATTGGGAA CGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTCCGT GACCCCGGTCTCCCTCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGATACTTTAA GCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCTGCT GCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAACGT GGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCTCCAAGAT GTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAGCGC CCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGGCTC GCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAACTCG GGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTCCGATCAC TTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACTAAGCCCC GCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGT GTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCT CTGCTTCTGTTCCATTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGC TGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCCCTCCCGAGACTATATATCATTGTCTTTTTCAGCCCGCT CCGGGCAAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTG GGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGGAAACCTGATCTTGCTATCAATTGCTGCTGCTTAAATGGCAG GCCAACTGGTCAGCTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCCAC CAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTG GATCTCCCCACCACCAGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATA >In-frame_ENST00000316273_ENST00000293261_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=459AA_start in transcript=13_stop in transcript=1392 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHP ASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSL GVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELK VRTPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALR AQDEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPP -------------------------------------------------------------- >In-frame_ENST00000316273_ENST00000377431_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=2255nt_BP=708nt CGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGATCTGGGCACGAAAGCTTCTCTCTGTCCCTTGGCTTCTGTGTGGTCCCAGAAG ATATGCCTCCTCCAGTTTCAAGGCTGCAGACCTGCAGCTGGAAATGACACAGAAGCCTCATAAGAAGCCTGGCCCCGGCGAGCCCCTGGT GTTTGGGAAGACATTTACCGACCACATGCTGATGGTGGAATGGAATGACAAGGGCTGGGGCCAGCCCCGAATCCAGCCCTTCCAGAACCT CACGCTGCACCCAGCCTCCTCCAGCCTCCACTACTCCCTGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCG CCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGA GTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCATTGGGAA CGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTCCGT GACCCCGGTCTCCCTCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGATACTTTAA GCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCTGCT GCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAACGT GGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCTCCAAGAT GTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAGCGC CCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGGCTC GCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAACTCG GGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTCCGATCAC TTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACTAAGCCCC GCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGT GTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCT CTGCTTCTGTTCCATTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGC TGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCCCTCCCGAGACTATATATCATTGTCTTTTTCAGCCCGCT CCGGGCAAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTG GGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGGAAACCTGATCTTGCTATCAATTGCTGCTGCTTAAATGGCAG GCCAACTGGTCAGCTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCCAC CAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTG GATCTCCCCACCACCAGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATA >In-frame_ENST00000316273_ENST00000377431_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=459AA_start in transcript=13_stop in transcript=1392 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHP ASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSL GVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELK VRTPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALR AQDEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPP -------------------------------------------------------------- >In-frame_ENST00000316273_ENST00000435956_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=2251nt_BP=708nt CGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGATCTGGGCACGAAAGCTTCTCTCTGTCCCTTGGCTTCTGTGTGGTCCCAGAAG ATATGCCTCCTCCAGTTTCAAGGCTGCAGACCTGCAGCTGGAAATGACACAGAAGCCTCATAAGAAGCCTGGCCCCGGCGAGCCCCTGGT GTTTGGGAAGACATTTACCGACCACATGCTGATGGTGGAATGGAATGACAAGGGCTGGGGCCAGCCCCGAATCCAGCCCTTCCAGAACCT CACGCTGCACCCAGCCTCCTCCAGCCTCCACTACTCCCTGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCG CCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGA GTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCATTGGGAA CGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTCCGT GACCCCGGTCTCCCTCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGATACTTTAA GCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCTGCT GCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAACGT GGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCTCCAAGAT GTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAGCGC CCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGGCTC GCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAACTCG GGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTCCGATCAC TTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACTAAGCCCC GCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGT GTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCT CTGCTTCTGTTCCATTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCACAGC TGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCCCTCCCGAGACTATATATCATTGTCTTTTTCAGCCCGCT CCGGGCAAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACTTTG GGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGGAAACCTGATCTTGCTATCAATTGCTGCTGCTTAAATGGCAG GCCAACTGGTCAGCTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCCAC CAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGTCTG GATCTCCCCACCACCAGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTAATA >In-frame_ENST00000316273_ENST00000435956_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=459AA_start in transcript=13_stop in transcript=1392 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHP ASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSL GVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELK VRTPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALR AQDEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPP -------------------------------------------------------------- >In-frame_ENST00000316273_ENST00000436660_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=1671nt_BP=708nt CGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGATCTGGGCACGAAAGCTTCTCTCTGTCCCTTGGCTTCTGTGTGGTCCCAGAAG ATATGCCTCCTCCAGTTTCAAGGCTGCAGACCTGCAGCTGGAAATGACACAGAAGCCTCATAAGAAGCCTGGCCCCGGCGAGCCCCTGGT GTTTGGGAAGACATTTACCGACCACATGCTGATGGTGGAATGGAATGACAAGGGCTGGGGCCAGCCCCGAATCCAGCCCTTCCAGAACCT CACGCTGCACCCAGCCTCCTCCAGCCTCCACTACTCCCTGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCG CCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGA GTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCATTGGGAA CGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTCCGT GACCCCGGTCTCCCTCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGATACTTTAA GCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCTGCT GCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAACGT GGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCTCCAAGAT GTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAGCGC CCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGGCTC GCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAACTCG GGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTCCGATCAC TTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACTAAGCCCC GCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCACTGT GTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGATTTAGCT >In-frame_ENST00000316273_ENST00000436660_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=459AA_start in transcript=13_stop in transcript=1392 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHP ASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSL GVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELK VRTPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALR AQDEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPP -------------------------------------------------------------- >In-frame_ENST00000316273_ENST00000541566_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=1506nt_BP=708nt CGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGATCTGGGCACGAAAGCTTCTCTCTGTCCCTTGGCTTCTGTGTGGTCCCAGAAG ATATGCCTCCTCCAGTTTCAAGGCTGCAGACCTGCAGCTGGAAATGACACAGAAGCCTCATAAGAAGCCTGGCCCCGGCGAGCCCCTGGT GTTTGGGAAGACATTTACCGACCACATGCTGATGGTGGAATGGAATGACAAGGGCTGGGGCCAGCCCCGAATCCAGCCCTTCCAGAACCT CACGCTGCACCCAGCCTCCTCCAGCCTCCACTACTCCCTGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCG CCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGA GTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCATTGGGAA CGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTCCGT GACCCCGGTCTCCCTCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGATACTTTAA GCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCTGCT GCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAACGT GGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCTCCAAGAT GTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAGCGC CCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGGCTC GCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAACTCG GGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTCCGATCAC TTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACTAAGCCCC >In-frame_ENST00000316273_ENST00000541566_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=459AA_start in transcript=13_stop in transcript=1392 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHP ASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSL GVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELK VRTPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALR AQDEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPP -------------------------------------------------------------- >In-frame_ENST00000599246_ENST00000293261_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=1989nt_BP=441nt ACAGTTACGCGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGT GCGCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCT GGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCATTGG GAACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTC CGTGACCCCGGTCTCCCTCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGATACTT TAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCT GCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAA CGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCTCCAA GATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAG CGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGG CTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAAC TCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTCCGAT CACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACTAAGC CCCGCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCAC TGTGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGATTTA GCTCTGCTTCTGTTCCATTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCAC AGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCCCTCCCGAGACTATATATCATTGTCTTTTTCAGCCC GCTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACT TTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGGAAACCTGATCTTGCTATCAATTGCTGCTGCTTAAATGG CAGGCCAACTGGTCAGCTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGC CACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGT CTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTA >In-frame_ENST00000599246_ENST00000293261_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=367AA_start in transcript=22_stop in transcript=1125 MAAAALGQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGV SQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELKVR TPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALRAQ DEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPPQA -------------------------------------------------------------- >In-frame_ENST00000599246_ENST00000377431_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=1988nt_BP=441nt ACAGTTACGCGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGT GCGCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCT GGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCATTGG GAACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTC CGTGACCCCGGTCTCCCTCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGATACTT TAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCT GCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAA CGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCTCCAA GATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAG CGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGG CTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAAC TCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTCCGAT CACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACTAAGC CCCGCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCAC TGTGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGATTTA GCTCTGCTTCTGTTCCATTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCAC AGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCCCTCCCGAGACTATATATCATTGTCTTTTTCAGCCC GCTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACT TTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGGAAACCTGATCTTGCTATCAATTGCTGCTGCTTAAATGG CAGGCCAACTGGTCAGCTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGC CACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGT CTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTA >In-frame_ENST00000599246_ENST00000377431_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=367AA_start in transcript=22_stop in transcript=1125 MAAAALGQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGV SQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELKVR TPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALRAQ DEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPPQA -------------------------------------------------------------- >In-frame_ENST00000599246_ENST00000435956_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=1984nt_BP=441nt ACAGTTACGCGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGT GCGCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCT GGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCATTGG GAACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTC CGTGACCCCGGTCTCCCTCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGATACTT TAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCT GCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAA CGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCTCCAA GATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAG CGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGG CTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAAC TCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTCCGAT CACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACTAAGC CCCGCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCAC TGTGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGATTTA GCTCTGCTTCTGTTCCATTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAATCAC AGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCCCTCCCGAGACTATATATCATTGTCTTTTTCAGCCC GCTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATCAACT TTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGGAAACCTGATCTTGCTATCAATTGCTGCTGCTTAAATGG CAGGCCAACTGGTCAGCTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCCTCGC CACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTTTCTACAGAAACTACCTCGGT CTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATGTTTA >In-frame_ENST00000599246_ENST00000435956_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=367AA_start in transcript=22_stop in transcript=1125 MAAAALGQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGV SQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELKVR TPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALRAQ DEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPPQA -------------------------------------------------------------- >In-frame_ENST00000599246_ENST00000436660_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=1404nt_BP=441nt ACAGTTACGCGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGT GCGCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCT GGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCATTGG GAACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTC CGTGACCCCGGTCTCCCTCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGATACTT TAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCT GCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAA CGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCTCCAA GATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAG CGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGG CTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAAC TCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTCCGAT CACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACTAAGC CCCGCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCTGCAC TGTGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGATTTA >In-frame_ENST00000599246_ENST00000436660_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=367AA_start in transcript=22_stop in transcript=1125 MAAAALGQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGV SQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELKVR TPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALRAQ DEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPPQA -------------------------------------------------------------- >In-frame_ENST00000599246_ENST00000541566_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=1239nt_BP=441nt ACAGTTACGCGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGT GCGCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCT GGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCATTGG GAACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTC CGTGACCCCGGTCTCCCTCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGATACTT TAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGCAGCT GCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCGTCAA CGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCTCCAA GATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGCTCAG CGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTCAAGG CTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACGGAAC TCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTCCGAT CACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACTAAGC >In-frame_ENST00000599246_ENST00000541566_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=367AA_start in transcript=22_stop in transcript=1125 MAAAALGQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGV SQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELKVR TPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALRAQ DEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPPQA -------------------------------------------------------------- >In-frame_ENST00000598162_ENST00000293261_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=2263nt_BP=715nt AGTTACGCGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGATCTGGGCACGAAAGCTTCTCTCTGTCCCTTGGCTTCTGTGTGGTC CCAGAAGATATGCCTCCTCCAGTTTCAAGGCTGCAGACCTGCAGCTGGAAATGACACAGAAGCCTCATAAGAAGCCTGGCCCCGGCGAGC CCCTGGTGTTTGGGAAGACATTTACCGACCACATGCTGATGGTGGAATGGAATGACAAGGGCTGGGGCCAGCCCCGAATCCAGCCCTTCC AGAACCTCACGCTGCACCCAGCCTCCTCCAGCCTCCACTACTCCCTGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGC AGGTGCGCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGT TGCTGGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCA TTGGGAACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAG GCTCCGTGACCCCGGTCTCCCTCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGAT ACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGC AGCTGCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCG TCAACGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCT CCAAGATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGC TCAGCGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTC AAGGCTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACG GAACTCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTC CGATCACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACT AAGCCCCGCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCT GCACTGTGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGA TTTAGCTCTGCTTCTGTTCCATTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAA TCACAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCCCTCCCGAGACTATATATCATTGTCTTTTTCA GCCCGCTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATC AACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGGAAACCTGATCTTGCTATCAATTGCTGCTGCTTAA ATGGCAGGCCAACTGGTCAGCTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCC TCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTTTCTACAGAAACTACCT CGGTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATG >In-frame_ENST00000598162_ENST00000293261_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=459AA_start in transcript=20_stop in transcript=1399 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHP ASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSL GVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELK VRTPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALR AQDEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPP -------------------------------------------------------------- >In-frame_ENST00000598162_ENST00000377431_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=2262nt_BP=715nt AGTTACGCGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGATCTGGGCACGAAAGCTTCTCTCTGTCCCTTGGCTTCTGTGTGGTC CCAGAAGATATGCCTCCTCCAGTTTCAAGGCTGCAGACCTGCAGCTGGAAATGACACAGAAGCCTCATAAGAAGCCTGGCCCCGGCGAGC CCCTGGTGTTTGGGAAGACATTTACCGACCACATGCTGATGGTGGAATGGAATGACAAGGGCTGGGGCCAGCCCCGAATCCAGCCCTTCC AGAACCTCACGCTGCACCCAGCCTCCTCCAGCCTCCACTACTCCCTGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGC AGGTGCGCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGT TGCTGGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCA TTGGGAACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAG GCTCCGTGACCCCGGTCTCCCTCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGAT ACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGC AGCTGCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCG TCAACGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCT CCAAGATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGC TCAGCGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTC AAGGCTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACG GAACTCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTC CGATCACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACT AAGCCCCGCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCT GCACTGTGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGA TTTAGCTCTGCTTCTGTTCCATTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAA TCACAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCCCTCCCGAGACTATATATCATTGTCTTTTTCA GCCCGCTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATC AACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGGAAACCTGATCTTGCTATCAATTGCTGCTGCTTAA ATGGCAGGCCAACTGGTCAGCTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCC TCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTTTCTACAGAAACTACCT CGGTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATG >In-frame_ENST00000598162_ENST00000377431_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=459AA_start in transcript=20_stop in transcript=1399 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHP ASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSL GVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELK VRTPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALR AQDEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPP -------------------------------------------------------------- >In-frame_ENST00000598162_ENST00000435956_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=2258nt_BP=715nt AGTTACGCGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGATCTGGGCACGAAAGCTTCTCTCTGTCCCTTGGCTTCTGTGTGGTC CCAGAAGATATGCCTCCTCCAGTTTCAAGGCTGCAGACCTGCAGCTGGAAATGACACAGAAGCCTCATAAGAAGCCTGGCCCCGGCGAGC CCCTGGTGTTTGGGAAGACATTTACCGACCACATGCTGATGGTGGAATGGAATGACAAGGGCTGGGGCCAGCCCCGAATCCAGCCCTTCC AGAACCTCACGCTGCACCCAGCCTCCTCCAGCCTCCACTACTCCCTGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGC AGGTGCGCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGT TGCTGGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCA TTGGGAACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAG GCTCCGTGACCCCGGTCTCCCTCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGAT ACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGC AGCTGCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCG TCAACGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCT CCAAGATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGC TCAGCGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTC AAGGCTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACG GAACTCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTC CGATCACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACT AAGCCCCGCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCT GCACTGTGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGA TTTAGCTCTGCTTCTGTTCCATTTCTTAGTCCCACCCTCACCATAAACATCCAAGTGTGGTTTGGCTGAGGAGCTGAGGGTGTCTGCCAA TCACAGCTGCTCAGCTCTGGCTTCTGTAAACCGCCAGGTAGAAGAGTTAAAGCTGCGCCCTCCCGAGACTATATATCATTGTCTTTTTCA GCCCGCTCCGGGCAAACTGCCCATCATGTGCACCAAGGCCGTTAGCCCTGCCTCCTGGCAAACGTCCAGTGACAGCTGCTGGGTTCCATC AACTTTGGGCAGCCGGTTGTCGCTGCAGGGAAGGAACCAATAAGAATTTCTAAAGGAAACCTGATCTTGCTATCAATTGCTGCTGCTTAA ATGGCAGGCCAACTGGTCAGCTGCTGATCAGGGTGTCTAGGCTGAAGGAGTTGGAGACCTTGTGCTAGGTAGGTGAACCAGAAACCACCC TCGCCACCAAGACTCGCTCCCAACCTGGCTCCCGGCAACCTCAGGTGCCTTCCTCGCCCAGGTCTTTCACCCTTTCTACAGAAACTACCT CGGTCTGGATCTCCCCACCACCAGCAGCCTGTGCAATATTTATTGGTCTATCAATTTCTCCCGTCTCCTGTCCCAAAGTAATAAATCATG >In-frame_ENST00000598162_ENST00000435956_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=459AA_start in transcript=20_stop in transcript=1399 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHP ASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSL GVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELK VRTPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALR AQDEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPP -------------------------------------------------------------- >In-frame_ENST00000598162_ENST00000436660_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=1678nt_BP=715nt AGTTACGCGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGATCTGGGCACGAAAGCTTCTCTCTGTCCCTTGGCTTCTGTGTGGTC CCAGAAGATATGCCTCCTCCAGTTTCAAGGCTGCAGACCTGCAGCTGGAAATGACACAGAAGCCTCATAAGAAGCCTGGCCCCGGCGAGC CCCTGGTGTTTGGGAAGACATTTACCGACCACATGCTGATGGTGGAATGGAATGACAAGGGCTGGGGCCAGCCCCGAATCCAGCCCTTCC AGAACCTCACGCTGCACCCAGCCTCCTCCAGCCTCCACTACTCCCTGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGC AGGTGCGCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGT TGCTGGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCA TTGGGAACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAG GCTCCGTGACCCCGGTCTCCCTCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGAT ACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGC AGCTGCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCG TCAACGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCT CCAAGATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGC TCAGCGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTC AAGGCTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACG GAACTCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTC CGATCACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACT AAGCCCCGCCTCCTTCACGACAGGCTGTCAATTACGGTTATTATACTTTTCACTCCAACTTCCAATAACTGACAGGTGATTATTTTTGCT GCACTGTGTGCTTAAGCAAAGCAGCCAATCAAAGCAGCTAGCAGTTGTTAAGTCTTCCCCGCCCCTTCGATGAACAGCCAATCAAAGCGA >In-frame_ENST00000598162_ENST00000436660_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=459AA_start in transcript=20_stop in transcript=1399 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHP ASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSL GVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELK VRTPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALR AQDEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPP -------------------------------------------------------------- >In-frame_ENST00000598162_ENST00000541566_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(transcript)=1513nt_BP=715nt AGTTACGCGCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAGATCTGGGCACGAAAGCTTCTCTCTGTCCCTTGGCTTCTGTGTGGTC CCAGAAGATATGCCTCCTCCAGTTTCAAGGCTGCAGACCTGCAGCTGGAAATGACACAGAAGCCTCATAAGAAGCCTGGCCCCGGCGAGC CCCTGGTGTTTGGGAAGACATTTACCGACCACATGCTGATGGTGGAATGGAATGACAAGGGCTGGGGCCAGCCCCGAATCCAGCCCTTCC AGAACCTCACGCTGCACCCAGCCTCCTCCAGCCTCCACTACTCCCTGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGC AGGTGCGCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTGGAGT TGCTGGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGCCTGTGCTCA TTGGGAACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAG GCTCCGTGACCCCGGTCTCCCTCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTGGGAGAT ACTTTAAGCGGGTGGTCCTGGCAGCCCGGACCAAACGGGGACACCTGGTACTGAAGAGTTTCAAGGACACGCCGCTGGAAGGCCTGGAGC AGCTGCTGCCGGAGCTGAAGGTGCGCACGCCCACCCTGCAGCGCGCCCTGCTCAACCTCATGCTGGTAGTCTCCGGCGTGGCGATCTTCG TCAACGTGGGCATGGTGGTGCTAACCGACCTCAAGGTGGCCACCTCCCTGCTGCTGCTGCTCTTCGCCATCTTCATGGGCCTGCGGGCCT CCAAGATGTTCGGGCAGCGGCGCAGCGCGCAGGCGTTGGAGCTGGCGCACATGCTGTACTATCGCAGTACGTCCAACAACTCGGAGCTGC TCAGCGCCCTGGCCCTGCGCGCGCAGGACGAGCACACCAAGGAGGCGCTGCTGGCTCACAGCTTCCTGGCCCGGCGGCCAGGGGGCACTC AAGGCTCGCCCGAAGAGACCTCCAGGTGGCTCCGGTCGGAGGTGGAGAACTGGCTCCTAGCCAAGTCAGGCTGTGAGGTGACCTTCAACG GAACTCGGGCCCTGGCGCATCTGCAGGCCCTGACCCCCAGCATGGGATTGTACCCACCCCCGGGTTTCCCCAAACTAGACCCAGTGGCTC CGATCACTTCCGAGCCCCCGCAAGCCACGCCCAGCAGTAACATCTCCTGAGTAGAACCTACCTCCCTGCCCAGTCAGCAGGCTAGGAACT >In-frame_ENST00000598162_ENST00000541566_TCGA-IR-A3LK-01A_BCAT2_chr19_49302932_-_TMEM143_chr19_48846066_length(amino acids)=459AA_start in transcript=20_stop in transcript=1399 MAAAALGQIWARKLLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHP ASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSL GVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGRYFKRVVLAARTKRGHLVLKSFKDTPLEGLEQLLPELK VRTPTLQRALLNLMLVVSGVAIFVNVGMVVLTDLKVATSLLLLLFAIFMGLRASKMFGQRRSAQALELAHMLYYRSTSNNSELLSALALR AQDEHTKEALLAHSFLARRPGGTQGSPEETSRWLRSEVENWLLAKSGCEVTFNGTRALAHLQALTPSMGLYPPPGFPKLDPVAPITSEPP -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for BCAT2-TMEM143 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for BCAT2-TMEM143 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Hgene | BCAT2 | O15382 | DB00114 | Pyridoxal phosphate | Cofactor | Small molecule | Approved|Investigational|Nutraceutical |
Hgene | BCAT2 | O15382 | DB00114 | Pyridoxal phosphate | Cofactor | Small molecule | Approved|Investigational|Nutraceutical |
Hgene | BCAT2 | O15382 | DB00114 | Pyridoxal phosphate | Cofactor | Small molecule | Approved|Investigational|Nutraceutical |
Hgene | BCAT2 | O15382 | DB00114 | Pyridoxal phosphate | Cofactor | Small molecule | Approved|Investigational|Nutraceutical |
Hgene | BCAT2 | O15382 | DB00142 | Glutamic acid | Small molecule | Approved|Nutraceutical | |
Hgene | BCAT2 | O15382 | DB00142 | Glutamic acid | Small molecule | Approved|Nutraceutical | |
Hgene | BCAT2 | O15382 | DB00142 | Glutamic acid | Small molecule | Approved|Nutraceutical | |
Hgene | BCAT2 | O15382 | DB00142 | Glutamic acid | Small molecule | Approved|Nutraceutical |
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Related Diseases for BCAT2-TMEM143 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | BCAT2 | C0024776 | Maple Syrup Urine Disease | 1 | CTD_human |
Hgene | BCAT2 | C0032927 | Precancerous Conditions | 1 | CTD_human |
Hgene | BCAT2 | C0268568 | Classic Maple Syrup Urine Disease | 1 | CTD_human |
Hgene | BCAT2 | C0268569 | Intermittent Maple Syrup Urine Disease | 1 | CTD_human |
Hgene | BCAT2 | C0282313 | Condition, Preneoplastic | 1 | CTD_human |
Hgene | BCAT2 | C0751285 | Maple Syrup Urine Disease, Thiamine Responsive | 1 | CTD_human |
Hgene | BCAT2 | C1621920 | Intermediate Maple Syrup Urine Disease | 1 | CTD_human |