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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:UBAP2-APTX (FusionGDB2 ID:95256) |
Fusion Gene Summary for UBAP2-APTX |
Fusion gene summary |
Fusion gene information | Fusion gene name: UBAP2-APTX | Fusion gene ID: 95256 | Hgene | Tgene | Gene symbol | UBAP2 | APTX | Gene ID | 55833 | 54840 |
Gene name | ubiquitin associated protein 2 | aprataxin | |
Synonyms | UBAP-2 | AOA|AOA1|AXA1|EAOH|EOAHA|FHA-HIT | |
Cytomap | 9p13.3 | 9p21.1 | |
Type of gene | protein-coding | protein-coding | |
Description | ubiquitin-associated protein 2AD-012 protein | aprataxinforkhead-associated domain histidine triad-like protein | |
Modification date | 20200313 | 20200320 | |
UniProtAcc | . | Q7Z2E3 | |
Ensembl transtripts involved in fusion gene | ENST00000449054, ENST00000379238, ENST00000360802, ENST00000379239, ENST00000539807, ENST00000418786, ENST00000379225, ENST00000379235, ENST00000480885, | ENST00000379825, ENST00000309615, ENST00000397172, ENST00000379817, ENST00000436040, ENST00000379819, ENST00000468275, ENST00000463596, ENST00000476858, ENST00000379813, ENST00000473270, | |
Fusion gene scores | * DoF score | 17 X 13 X 10=2210 | 3 X 5 X 2=30 |
# samples | 19 | 3 | |
** MAII score | log2(19/2210*10)=-3.53997504594785 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/30*10)=0 | |
Context | PubMed: UBAP2 [Title/Abstract] AND APTX [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | UBAP2(34017048)-APTX(32988122), # samples:2 UBAP2(34017048)-APTX(32987844), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | UBAP2-APTX seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. UBAP2-APTX seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | APTX | GO:0000012 | single strand break repair | 17519253 |
Tgene | APTX | GO:0042542 | response to hydrogen peroxide | 15044383 |
Fusion gene breakpoints across UBAP2 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across APTX (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUAD | TCGA-78-7150-01A | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
ChimerDB4 | LUAD | TCGA-78-7150-01A | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
ChimerDB4 | LUAD | TCGA-78-7150-01A | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
ChimerDB4 | LUAD | TCGA-78-7150-01A | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
ChimerDB4 | LUAD | TCGA-78-7150-01A | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Top |
Fusion Gene ORF analysis for UBAP2-APTX |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000449054 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
Frame-shift | ENST00000449054 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
Frame-shift | ENST00000449054 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
Frame-shift | ENST00000449054 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
In-frame | ENST00000449054 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
Frame-shift | ENST00000449054 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
Frame-shift | ENST00000449054 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
Frame-shift | ENST00000449054 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5CDS-intron | ENST00000449054 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5CDS-intron | ENST00000449054 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5CDS-intron | ENST00000449054 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
Frame-shift | ENST00000379238 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
Frame-shift | ENST00000379238 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
Frame-shift | ENST00000379238 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
Frame-shift | ENST00000379238 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
In-frame | ENST00000379238 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
Frame-shift | ENST00000379238 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
Frame-shift | ENST00000379238 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
Frame-shift | ENST00000379238 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5CDS-intron | ENST00000379238 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5CDS-intron | ENST00000379238 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5CDS-intron | ENST00000379238 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
In-frame | ENST00000360802 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
In-frame | ENST00000360802 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
In-frame | ENST00000360802 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
In-frame | ENST00000360802 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
Frame-shift | ENST00000360802 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
In-frame | ENST00000360802 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
In-frame | ENST00000360802 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
In-frame | ENST00000360802 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5CDS-intron | ENST00000360802 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5CDS-intron | ENST00000360802 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5CDS-intron | ENST00000360802 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379239 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379239 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379239 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379239 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379239 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379239 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379239 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379239 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-intron | ENST00000379239 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-intron | ENST00000379239 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-intron | ENST00000379239 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-3CDS | ENST00000539807 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-3CDS | ENST00000539807 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-3CDS | ENST00000539807 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-3CDS | ENST00000539807 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-3CDS | ENST00000539807 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-3CDS | ENST00000539807 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-3CDS | ENST00000539807 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-3CDS | ENST00000539807 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-intron | ENST00000539807 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-intron | ENST00000539807 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-intron | ENST00000539807 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
In-frame | ENST00000418786 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
In-frame | ENST00000418786 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
In-frame | ENST00000418786 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
In-frame | ENST00000418786 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
Frame-shift | ENST00000418786 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
In-frame | ENST00000418786 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
In-frame | ENST00000418786 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
In-frame | ENST00000418786 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5CDS-intron | ENST00000418786 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5CDS-intron | ENST00000418786 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5CDS-intron | ENST00000418786 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379225 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379225 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379225 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379225 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379225 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379225 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379225 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379225 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-intron | ENST00000379225 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-intron | ENST00000379225 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-intron | ENST00000379225 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379235 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379235 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379235 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379235 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379235 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379235 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379235 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-3CDS | ENST00000379235 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-intron | ENST00000379235 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-intron | ENST00000379235 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
intron-intron | ENST00000379235 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-3CDS | ENST00000480885 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-3CDS | ENST00000480885 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-3CDS | ENST00000480885 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-3CDS | ENST00000480885 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-3CDS | ENST00000480885 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-3CDS | ENST00000480885 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-3CDS | ENST00000480885 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-3CDS | ENST00000480885 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-intron | ENST00000480885 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-intron | ENST00000480885 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
5UTR-intron | ENST00000480885 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - |
Frame-shift | ENST00000449054 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
In-frame | ENST00000449054 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Frame-shift | ENST00000449054 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Frame-shift | ENST00000449054 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
In-frame | ENST00000449054 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Frame-shift | ENST00000449054 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Frame-shift | ENST00000449054 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Frame-shift | ENST00000449054 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5CDS-intron | ENST00000449054 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5CDS-intron | ENST00000449054 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5CDS-intron | ENST00000449054 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Frame-shift | ENST00000379238 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
In-frame | ENST00000379238 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Frame-shift | ENST00000379238 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Frame-shift | ENST00000379238 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
In-frame | ENST00000379238 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Frame-shift | ENST00000379238 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Frame-shift | ENST00000379238 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Frame-shift | ENST00000379238 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5CDS-intron | ENST00000379238 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5CDS-intron | ENST00000379238 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5CDS-intron | ENST00000379238 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
In-frame | ENST00000360802 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Frame-shift | ENST00000360802 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
In-frame | ENST00000360802 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
In-frame | ENST00000360802 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Frame-shift | ENST00000360802 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
In-frame | ENST00000360802 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
In-frame | ENST00000360802 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
In-frame | ENST00000360802 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5CDS-intron | ENST00000360802 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5CDS-intron | ENST00000360802 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5CDS-intron | ENST00000360802 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379239 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379239 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379239 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379239 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379239 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379239 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379239 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379239 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-intron | ENST00000379239 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-intron | ENST00000379239 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-intron | ENST00000379239 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-3CDS | ENST00000539807 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-3CDS | ENST00000539807 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-3CDS | ENST00000539807 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-3CDS | ENST00000539807 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-3CDS | ENST00000539807 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-3CDS | ENST00000539807 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-3CDS | ENST00000539807 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-3CDS | ENST00000539807 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-intron | ENST00000539807 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-intron | ENST00000539807 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-intron | ENST00000539807 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
In-frame | ENST00000418786 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Frame-shift | ENST00000418786 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
In-frame | ENST00000418786 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
In-frame | ENST00000418786 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Frame-shift | ENST00000418786 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
In-frame | ENST00000418786 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
In-frame | ENST00000418786 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
In-frame | ENST00000418786 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5CDS-intron | ENST00000418786 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5CDS-intron | ENST00000418786 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5CDS-intron | ENST00000418786 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379225 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379225 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379225 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379225 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379225 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379225 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379225 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379225 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-intron | ENST00000379225 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-intron | ENST00000379225 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-intron | ENST00000379225 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379235 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379235 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379235 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379235 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379235 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379235 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379235 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-3CDS | ENST00000379235 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-intron | ENST00000379235 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-intron | ENST00000379235 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
intron-intron | ENST00000379235 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-3CDS | ENST00000480885 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-3CDS | ENST00000480885 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-3CDS | ENST00000480885 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-3CDS | ENST00000480885 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-3CDS | ENST00000480885 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-3CDS | ENST00000480885 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-3CDS | ENST00000480885 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-3CDS | ENST00000480885 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-intron | ENST00000480885 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-intron | ENST00000480885 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
5UTR-intron | ENST00000480885 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - |
Frame-shift | ENST00000449054 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
Frame-shift | ENST00000449054 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
Frame-shift | ENST00000449054 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
Frame-shift | ENST00000449054 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
In-frame | ENST00000449054 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
Frame-shift | ENST00000449054 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
Frame-shift | ENST00000449054 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
Frame-shift | ENST00000449054 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5CDS-intron | ENST00000449054 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5CDS-intron | ENST00000449054 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5CDS-intron | ENST00000449054 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
Frame-shift | ENST00000379238 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
Frame-shift | ENST00000379238 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
Frame-shift | ENST00000379238 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
Frame-shift | ENST00000379238 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
In-frame | ENST00000379238 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
Frame-shift | ENST00000379238 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
Frame-shift | ENST00000379238 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
Frame-shift | ENST00000379238 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5CDS-intron | ENST00000379238 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5CDS-intron | ENST00000379238 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5CDS-intron | ENST00000379238 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
In-frame | ENST00000360802 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
In-frame | ENST00000360802 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
In-frame | ENST00000360802 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
In-frame | ENST00000360802 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
Frame-shift | ENST00000360802 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
In-frame | ENST00000360802 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
In-frame | ENST00000360802 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
In-frame | ENST00000360802 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5CDS-intron | ENST00000360802 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5CDS-intron | ENST00000360802 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5CDS-intron | ENST00000360802 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379239 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379239 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379239 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379239 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379239 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379239 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379239 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379239 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-intron | ENST00000379239 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-intron | ENST00000379239 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-intron | ENST00000379239 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-3CDS | ENST00000539807 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-3CDS | ENST00000539807 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-3CDS | ENST00000539807 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-3CDS | ENST00000539807 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-3CDS | ENST00000539807 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-3CDS | ENST00000539807 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-3CDS | ENST00000539807 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-3CDS | ENST00000539807 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-intron | ENST00000539807 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-intron | ENST00000539807 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-intron | ENST00000539807 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
In-frame | ENST00000418786 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
In-frame | ENST00000418786 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
In-frame | ENST00000418786 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
In-frame | ENST00000418786 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
Frame-shift | ENST00000418786 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
In-frame | ENST00000418786 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
In-frame | ENST00000418786 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
In-frame | ENST00000418786 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5CDS-intron | ENST00000418786 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5CDS-intron | ENST00000418786 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5CDS-intron | ENST00000418786 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379225 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379225 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379225 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379225 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379225 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379225 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379225 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379225 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-intron | ENST00000379225 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-intron | ENST00000379225 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-intron | ENST00000379225 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379235 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379235 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379235 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379235 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379235 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379235 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379235 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-3CDS | ENST00000379235 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-intron | ENST00000379235 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-intron | ENST00000379235 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
intron-intron | ENST00000379235 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-3CDS | ENST00000480885 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-3CDS | ENST00000480885 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-3CDS | ENST00000480885 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-3CDS | ENST00000480885 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-3CDS | ENST00000480885 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-3CDS | ENST00000480885 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-3CDS | ENST00000480885 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-3CDS | ENST00000480885 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-intron | ENST00000480885 | ENST00000476858 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-intron | ENST00000480885 | ENST00000379813 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
5UTR-intron | ENST00000480885 | ENST00000473270 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000449054 | UBAP2 | chr9 | 34017048 | - | ENST00000436040 | APTX | chr9 | 32988122 | - | 1744 | 201 | 128 | 646 | 172 |
ENST00000379238 | UBAP2 | chr9 | 34017048 | - | ENST00000436040 | APTX | chr9 | 32988122 | - | 1760 | 217 | 144 | 662 | 172 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000379825 | APTX | chr9 | 32988122 | - | 2036 | 212 | 139 | 957 | 272 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000309615 | APTX | chr9 | 32988122 | - | 2031 | 212 | 139 | 957 | 272 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000397172 | APTX | chr9 | 32988122 | - | 1774 | 212 | 139 | 891 | 250 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000379817 | APTX | chr9 | 32988122 | - | 1988 | 212 | 139 | 1107 | 322 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000379819 | APTX | chr9 | 32988122 | - | 1857 | 212 | 139 | 1107 | 322 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000468275 | APTX | chr9 | 32988122 | - | 1441 | 212 | 139 | 1107 | 322 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000463596 | APTX | chr9 | 32988122 | - | 1230 | 212 | 139 | 1107 | 322 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000379825 | APTX | chr9 | 32988122 | - | 2016 | 192 | 119 | 937 | 272 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000309615 | APTX | chr9 | 32988122 | - | 2011 | 192 | 119 | 937 | 272 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000397172 | APTX | chr9 | 32988122 | - | 1754 | 192 | 119 | 871 | 250 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000379817 | APTX | chr9 | 32988122 | - | 1968 | 192 | 119 | 1087 | 322 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000379819 | APTX | chr9 | 32988122 | - | 1837 | 192 | 119 | 1087 | 322 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000468275 | APTX | chr9 | 32988122 | - | 1421 | 192 | 119 | 1087 | 322 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000463596 | APTX | chr9 | 32988122 | - | 1210 | 192 | 119 | 1087 | 322 |
ENST00000449054 | UBAP2 | chr9 | 34017048 | - | ENST00000309615 | APTX | chr9 | 32987844 | - | 1973 | 201 | 87 | 899 | 270 |
ENST00000449054 | UBAP2 | chr9 | 34017048 | - | ENST00000436040 | APTX | chr9 | 32987844 | - | 1697 | 201 | 87 | 599 | 170 |
ENST00000379238 | UBAP2 | chr9 | 34017048 | - | ENST00000309615 | APTX | chr9 | 32987844 | - | 1989 | 217 | 103 | 915 | 270 |
ENST00000379238 | UBAP2 | chr9 | 34017048 | - | ENST00000436040 | APTX | chr9 | 32987844 | - | 1713 | 217 | 103 | 615 | 170 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000379825 | APTX | chr9 | 32987844 | - | 1985 | 212 | 139 | 906 | 255 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000397172 | APTX | chr9 | 32987844 | - | 1723 | 212 | 139 | 840 | 233 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000379817 | APTX | chr9 | 32987844 | - | 1937 | 212 | 139 | 1056 | 305 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000379819 | APTX | chr9 | 32987844 | - | 1806 | 212 | 139 | 1056 | 305 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000468275 | APTX | chr9 | 32987844 | - | 1390 | 212 | 139 | 1056 | 305 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000463596 | APTX | chr9 | 32987844 | - | 1179 | 212 | 139 | 1056 | 305 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000379825 | APTX | chr9 | 32987844 | - | 1965 | 192 | 119 | 886 | 255 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000397172 | APTX | chr9 | 32987844 | - | 1703 | 192 | 119 | 820 | 233 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000379817 | APTX | chr9 | 32987844 | - | 1917 | 192 | 119 | 1036 | 305 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000379819 | APTX | chr9 | 32987844 | - | 1786 | 192 | 119 | 1036 | 305 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000468275 | APTX | chr9 | 32987844 | - | 1370 | 192 | 119 | 1036 | 305 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000463596 | APTX | chr9 | 32987844 | - | 1159 | 192 | 119 | 1036 | 305 |
ENST00000449054 | UBAP2 | chr9 | 34017048 | - | ENST00000436040 | APTX | chr9 | 32988127 | - | 1744 | 201 | 128 | 646 | 172 |
ENST00000379238 | UBAP2 | chr9 | 34017048 | - | ENST00000436040 | APTX | chr9 | 32988127 | - | 1760 | 217 | 144 | 662 | 172 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000379825 | APTX | chr9 | 32988127 | - | 2036 | 212 | 139 | 957 | 272 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000309615 | APTX | chr9 | 32988127 | - | 2031 | 212 | 139 | 957 | 272 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000397172 | APTX | chr9 | 32988127 | - | 1774 | 212 | 139 | 891 | 250 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000379817 | APTX | chr9 | 32988127 | - | 1988 | 212 | 139 | 1107 | 322 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000379819 | APTX | chr9 | 32988127 | - | 1857 | 212 | 139 | 1107 | 322 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000468275 | APTX | chr9 | 32988127 | - | 1441 | 212 | 139 | 1107 | 322 |
ENST00000360802 | UBAP2 | chr9 | 34017048 | - | ENST00000463596 | APTX | chr9 | 32988127 | - | 1230 | 212 | 139 | 1107 | 322 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000379825 | APTX | chr9 | 32988127 | - | 2016 | 192 | 119 | 937 | 272 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000309615 | APTX | chr9 | 32988127 | - | 2011 | 192 | 119 | 937 | 272 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000397172 | APTX | chr9 | 32988127 | - | 1754 | 192 | 119 | 871 | 250 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000379817 | APTX | chr9 | 32988127 | - | 1968 | 192 | 119 | 1087 | 322 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000379819 | APTX | chr9 | 32988127 | - | 1837 | 192 | 119 | 1087 | 322 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000468275 | APTX | chr9 | 32988127 | - | 1421 | 192 | 119 | 1087 | 322 |
ENST00000418786 | UBAP2 | chr9 | 34017048 | - | ENST00000463596 | APTX | chr9 | 32988127 | - | 1210 | 192 | 119 | 1087 | 322 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000449054 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - | 0.059840653 | 0.9401594 |
ENST00000379238 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - | 0.020572873 | 0.9794271 |
ENST00000360802 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - | 0.003508298 | 0.99649173 |
ENST00000360802 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - | 0.003500169 | 0.9964998 |
ENST00000360802 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - | 0.02171037 | 0.97828966 |
ENST00000360802 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - | 0.003316134 | 0.9966839 |
ENST00000360802 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - | 0.003259701 | 0.9967403 |
ENST00000360802 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - | 0.006275579 | 0.9937244 |
ENST00000360802 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - | 0.006803522 | 0.9931965 |
ENST00000418786 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - | 0.004396137 | 0.9956039 |
ENST00000418786 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - | 0.004375977 | 0.995624 |
ENST00000418786 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - | 0.037743818 | 0.9622562 |
ENST00000418786 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - | 0.004029461 | 0.9959706 |
ENST00000418786 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - | 0.003839258 | 0.99616075 |
ENST00000418786 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - | 0.007088228 | 0.99291176 |
ENST00000418786 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988122 | - | 0.007889506 | 0.99211055 |
ENST00000449054 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - | 0.00390568 | 0.9960943 |
ENST00000449054 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - | 0.006318142 | 0.9936819 |
ENST00000379238 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - | 0.003089782 | 0.9969103 |
ENST00000379238 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - | 0.004417019 | 0.995583 |
ENST00000360802 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - | 0.00336085 | 0.99663913 |
ENST00000360802 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - | 0.02344335 | 0.97655666 |
ENST00000360802 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - | 0.003708856 | 0.99629116 |
ENST00000360802 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - | 0.003913658 | 0.99608636 |
ENST00000360802 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - | 0.006832612 | 0.99316746 |
ENST00000360802 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - | 0.007421144 | 0.9925788 |
ENST00000418786 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - | 0.005958648 | 0.9940414 |
ENST00000418786 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - | 0.025250677 | 0.9747493 |
ENST00000418786 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - | 0.003903455 | 0.99609655 |
ENST00000418786 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - | 0.004195581 | 0.9958045 |
ENST00000418786 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - | 0.007527954 | 0.99247205 |
ENST00000418786 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32987844 | - | 0.00832571 | 0.99167436 |
ENST00000449054 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - | 0.059840653 | 0.9401594 |
ENST00000379238 | ENST00000436040 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - | 0.020572873 | 0.9794271 |
ENST00000360802 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - | 0.003508298 | 0.99649173 |
ENST00000360802 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - | 0.003500169 | 0.9964998 |
ENST00000360802 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - | 0.02171037 | 0.97828966 |
ENST00000360802 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - | 0.003316134 | 0.9966839 |
ENST00000360802 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - | 0.003259701 | 0.9967403 |
ENST00000360802 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - | 0.006275579 | 0.9937244 |
ENST00000360802 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - | 0.006803522 | 0.9931965 |
ENST00000418786 | ENST00000379825 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - | 0.004396137 | 0.9956039 |
ENST00000418786 | ENST00000309615 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - | 0.004375977 | 0.995624 |
ENST00000418786 | ENST00000397172 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - | 0.037743818 | 0.9622562 |
ENST00000418786 | ENST00000379817 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - | 0.004029461 | 0.9959706 |
ENST00000418786 | ENST00000379819 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - | 0.003839258 | 0.99616075 |
ENST00000418786 | ENST00000468275 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - | 0.007088228 | 0.99291176 |
ENST00000418786 | ENST00000463596 | UBAP2 | chr9 | 34017048 | - | APTX | chr9 | 32988127 | - | 0.007889506 | 0.99211055 |
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Fusion Genomic Features for UBAP2-APTX |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for UBAP2-APTX |
Go to FGviewer for the breakpoints of chr9:34017048-chr9:32988122 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | APTX |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: DNA-binding protein involved in single-strand DNA break repair, double-strand DNA break repair and base excision repair (PubMed:15380105, PubMed:15044383, PubMed:16964241, PubMed:17276982, PubMed:24362567). Resolves abortive DNA ligation intermediates formed either at base excision sites, or when DNA ligases attempt to repair non-ligatable breaks induced by reactive oxygen species (PubMed:16964241, PubMed:24362567). Catalyzes the release of adenylate groups covalently linked to 5'-phosphate termini, resulting in the production of 5'-phosphate termini that can be efficiently rejoined (PubMed:16964241, PubMed:17276982, PubMed:24362567). Also able to hydrolyze adenosine 5'-monophosphoramidate (AMP-NH(2)) and diadenosine tetraphosphate (AppppA), but with lower catalytic activity (PubMed:16547001). Likewise, catalyzes the release of 3'-linked guanosine (DNAppG) and inosine (DNAppI) from DNA, but has higher specific activity with 5'-linked adenosine (AppDNA) (By similarity). {ECO:0000250|UniProtKB:O74859, ECO:0000269|PubMed:15044383, ECO:0000269|PubMed:15380105, ECO:0000269|PubMed:16547001, ECO:0000269|PubMed:16964241, ECO:0000269|PubMed:17276982, ECO:0000269|PubMed:24362567}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000309615 | 2 | 8 | 182_287 | 74.0 | 307.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379813 | 2 | 8 | 182_287 | 60.0 | 343.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379817 | 1 | 7 | 182_287 | 61.333333333333336 | 343.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379819 | 2 | 8 | 182_287 | 75.33333333333333 | 357.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379825 | 2 | 8 | 182_287 | 75.33333333333333 | 307.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000397172 | 2 | 8 | 182_287 | 75.33333333333333 | 285.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000436040 | 1 | 6 | 182_287 | 60.0 | 445.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000463596 | 2 | 8 | 182_287 | 61.333333333333336 | 343.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000468275 | 2 | 8 | 182_287 | 61.333333333333336 | 343.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000476858 | 0 | 7 | 182_287 | 0 | 303.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000476858 | 0 | 7 | 38_87 | 0 | 303.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000309615 | 1 | 8 | 182_287 | 58.333333333333336 | 307.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379813 | 1 | 8 | 182_287 | 44.333333333333336 | 343.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379817 | 0 | 7 | 182_287 | 44.333333333333336 | 343.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379819 | 1 | 8 | 182_287 | 58.333333333333336 | 357.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379825 | 1 | 8 | 182_287 | 58.333333333333336 | 307.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000397172 | 1 | 8 | 182_287 | 58.333333333333336 | 285.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000436040 | 0 | 6 | 182_287 | 44.333333333333336 | 445.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000463596 | 1 | 8 | 182_287 | 44.333333333333336 | 343.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000468275 | 1 | 8 | 182_287 | 44.333333333333336 | 343.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000476858 | 0 | 7 | 182_287 | 0 | 303.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000476858 | 0 | 7 | 38_87 | 0 | 303.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000309615 | 1 | 8 | 182_287 | 58.333333333333336 | 307.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379813 | 1 | 8 | 182_287 | 44.333333333333336 | 343.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379817 | 0 | 7 | 182_287 | 44.333333333333336 | 343.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379819 | 1 | 8 | 182_287 | 58.333333333333336 | 357.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379825 | 1 | 8 | 182_287 | 58.333333333333336 | 307.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000397172 | 1 | 8 | 182_287 | 58.333333333333336 | 285.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000436040 | 0 | 6 | 182_287 | 44.333333333333336 | 445.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000463596 | 1 | 8 | 182_287 | 44.333333333333336 | 343.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000468275 | 1 | 8 | 182_287 | 44.333333333333336 | 343.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000476858 | 0 | 7 | 182_287 | 0 | 303.0 | Domain | HIT | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000476858 | 0 | 7 | 38_87 | 0 | 303.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000309615 | 2 | 8 | 126_131 | 74.0 | 307.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000309615 | 2 | 8 | 272_276 | 74.0 | 307.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379813 | 2 | 8 | 126_131 | 60.0 | 343.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379813 | 2 | 8 | 272_276 | 60.0 | 343.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379817 | 1 | 7 | 126_131 | 61.333333333333336 | 343.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379817 | 1 | 7 | 272_276 | 61.333333333333336 | 343.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379819 | 2 | 8 | 126_131 | 75.33333333333333 | 357.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379819 | 2 | 8 | 272_276 | 75.33333333333333 | 357.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379825 | 2 | 8 | 126_131 | 75.33333333333333 | 307.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379825 | 2 | 8 | 272_276 | 75.33333333333333 | 307.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000397172 | 2 | 8 | 126_131 | 75.33333333333333 | 285.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000397172 | 2 | 8 | 272_276 | 75.33333333333333 | 285.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000436040 | 1 | 6 | 126_131 | 60.0 | 445.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000436040 | 1 | 6 | 272_276 | 60.0 | 445.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000463596 | 2 | 8 | 126_131 | 61.333333333333336 | 343.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000463596 | 2 | 8 | 272_276 | 61.333333333333336 | 343.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000468275 | 2 | 8 | 126_131 | 61.333333333333336 | 343.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000468275 | 2 | 8 | 272_276 | 61.333333333333336 | 343.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000476858 | 0 | 7 | 126_131 | 0 | 303.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000476858 | 0 | 7 | 272_276 | 0 | 303.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000309615 | 1 | 8 | 126_131 | 58.333333333333336 | 307.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000309615 | 1 | 8 | 272_276 | 58.333333333333336 | 307.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379813 | 1 | 8 | 126_131 | 44.333333333333336 | 343.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379813 | 1 | 8 | 272_276 | 44.333333333333336 | 343.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379817 | 0 | 7 | 126_131 | 44.333333333333336 | 343.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379817 | 0 | 7 | 272_276 | 44.333333333333336 | 343.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379819 | 1 | 8 | 126_131 | 58.333333333333336 | 357.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379819 | 1 | 8 | 272_276 | 58.333333333333336 | 357.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379825 | 1 | 8 | 126_131 | 58.333333333333336 | 307.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379825 | 1 | 8 | 272_276 | 58.333333333333336 | 307.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000397172 | 1 | 8 | 126_131 | 58.333333333333336 | 285.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000397172 | 1 | 8 | 272_276 | 58.333333333333336 | 285.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000436040 | 0 | 6 | 126_131 | 44.333333333333336 | 445.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000436040 | 0 | 6 | 272_276 | 44.333333333333336 | 445.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000463596 | 1 | 8 | 126_131 | 44.333333333333336 | 343.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000463596 | 1 | 8 | 272_276 | 44.333333333333336 | 343.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000468275 | 1 | 8 | 126_131 | 44.333333333333336 | 343.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000468275 | 1 | 8 | 272_276 | 44.333333333333336 | 343.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000476858 | 0 | 7 | 126_131 | 0 | 303.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000476858 | 0 | 7 | 272_276 | 0 | 303.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000309615 | 1 | 8 | 126_131 | 58.333333333333336 | 307.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000309615 | 1 | 8 | 272_276 | 58.333333333333336 | 307.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379813 | 1 | 8 | 126_131 | 44.333333333333336 | 343.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379813 | 1 | 8 | 272_276 | 44.333333333333336 | 343.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379817 | 0 | 7 | 126_131 | 44.333333333333336 | 343.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379817 | 0 | 7 | 272_276 | 44.333333333333336 | 343.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379819 | 1 | 8 | 126_131 | 58.333333333333336 | 357.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379819 | 1 | 8 | 272_276 | 58.333333333333336 | 357.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379825 | 1 | 8 | 126_131 | 58.333333333333336 | 307.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379825 | 1 | 8 | 272_276 | 58.333333333333336 | 307.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000397172 | 1 | 8 | 126_131 | 58.333333333333336 | 285.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000397172 | 1 | 8 | 272_276 | 58.333333333333336 | 285.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000436040 | 0 | 6 | 126_131 | 44.333333333333336 | 445.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000436040 | 0 | 6 | 272_276 | 44.333333333333336 | 445.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000463596 | 1 | 8 | 126_131 | 44.333333333333336 | 343.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000463596 | 1 | 8 | 272_276 | 44.333333333333336 | 343.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000468275 | 1 | 8 | 126_131 | 44.333333333333336 | 343.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000468275 | 1 | 8 | 272_276 | 44.333333333333336 | 343.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000476858 | 0 | 7 | 126_131 | 0 | 303.0 | Motif | Nuclear localization signal | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000476858 | 0 | 7 | 272_276 | 0 | 303.0 | Motif | Histidine triad motif | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000309615 | 2 | 8 | 331_353 | 74.0 | 307.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379813 | 2 | 8 | 331_353 | 60.0 | 343.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379817 | 1 | 7 | 331_353 | 61.333333333333336 | 343.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379819 | 2 | 8 | 331_353 | 75.33333333333333 | 357.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379825 | 2 | 8 | 331_353 | 75.33333333333333 | 307.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000397172 | 2 | 8 | 331_353 | 75.33333333333333 | 285.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000436040 | 1 | 6 | 331_353 | 60.0 | 445.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000463596 | 2 | 8 | 331_353 | 61.333333333333336 | 343.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000468275 | 2 | 8 | 331_353 | 61.333333333333336 | 343.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000476858 | 0 | 7 | 331_353 | 0 | 303.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000309615 | 1 | 8 | 331_353 | 58.333333333333336 | 307.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379813 | 1 | 8 | 331_353 | 44.333333333333336 | 343.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379817 | 0 | 7 | 331_353 | 44.333333333333336 | 343.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379819 | 1 | 8 | 331_353 | 58.333333333333336 | 357.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379825 | 1 | 8 | 331_353 | 58.333333333333336 | 307.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000397172 | 1 | 8 | 331_353 | 58.333333333333336 | 285.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000436040 | 0 | 6 | 331_353 | 44.333333333333336 | 445.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000463596 | 1 | 8 | 331_353 | 44.333333333333336 | 343.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000468275 | 1 | 8 | 331_353 | 44.333333333333336 | 343.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000476858 | 0 | 7 | 331_353 | 0 | 303.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000309615 | 1 | 8 | 331_353 | 58.333333333333336 | 307.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379813 | 1 | 8 | 331_353 | 44.333333333333336 | 343.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379817 | 0 | 7 | 331_353 | 44.333333333333336 | 343.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379819 | 1 | 8 | 331_353 | 58.333333333333336 | 357.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379825 | 1 | 8 | 331_353 | 58.333333333333336 | 307.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000397172 | 1 | 8 | 331_353 | 58.333333333333336 | 285.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000436040 | 0 | 6 | 331_353 | 44.333333333333336 | 445.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000463596 | 1 | 8 | 331_353 | 44.333333333333336 | 343.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000468275 | 1 | 8 | 331_353 | 44.333333333333336 | 343.0 | Zinc finger | C2H2-type | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000476858 | 0 | 7 | 331_353 | 0 | 303.0 | Zinc finger | C2H2-type |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | UBAP2 | chr9:34017048 | chr9:32987844 | ENST00000360802 | - | 2 | 29 | 105_130 | 33.0 | 1120.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | UBAP2 | chr9:34017048 | chr9:32987844 | ENST00000379238 | - | 2 | 29 | 105_130 | 33.0 | 1120.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | UBAP2 | chr9:34017048 | chr9:32987844 | ENST00000449054 | - | 2 | 30 | 105_130 | 33.0 | 1190.6666666666667 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | UBAP2 | chr9:34017048 | chr9:32988122 | ENST00000360802 | - | 2 | 29 | 105_130 | 33.0 | 1120.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | UBAP2 | chr9:34017048 | chr9:32988122 | ENST00000379238 | - | 2 | 29 | 105_130 | 33.0 | 1120.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | UBAP2 | chr9:34017048 | chr9:32988122 | ENST00000449054 | - | 2 | 30 | 105_130 | 33.0 | 1190.6666666666667 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | UBAP2 | chr9:34017048 | chr9:32988127 | ENST00000360802 | - | 2 | 29 | 105_130 | 33.0 | 1120.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | UBAP2 | chr9:34017048 | chr9:32988127 | ENST00000379238 | - | 2 | 29 | 105_130 | 33.0 | 1120.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | UBAP2 | chr9:34017048 | chr9:32988127 | ENST00000449054 | - | 2 | 30 | 105_130 | 33.0 | 1190.6666666666667 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | UBAP2 | chr9:34017048 | chr9:32987844 | ENST00000360802 | - | 2 | 29 | 48_92 | 33.0 | 1120.0 | Domain | UBA |
Hgene | UBAP2 | chr9:34017048 | chr9:32987844 | ENST00000379238 | - | 2 | 29 | 48_92 | 33.0 | 1120.0 | Domain | UBA |
Hgene | UBAP2 | chr9:34017048 | chr9:32987844 | ENST00000449054 | - | 2 | 30 | 48_92 | 33.0 | 1190.6666666666667 | Domain | UBA |
Hgene | UBAP2 | chr9:34017048 | chr9:32988122 | ENST00000360802 | - | 2 | 29 | 48_92 | 33.0 | 1120.0 | Domain | UBA |
Hgene | UBAP2 | chr9:34017048 | chr9:32988122 | ENST00000379238 | - | 2 | 29 | 48_92 | 33.0 | 1120.0 | Domain | UBA |
Hgene | UBAP2 | chr9:34017048 | chr9:32988122 | ENST00000449054 | - | 2 | 30 | 48_92 | 33.0 | 1190.6666666666667 | Domain | UBA |
Hgene | UBAP2 | chr9:34017048 | chr9:32988127 | ENST00000360802 | - | 2 | 29 | 48_92 | 33.0 | 1120.0 | Domain | UBA |
Hgene | UBAP2 | chr9:34017048 | chr9:32988127 | ENST00000379238 | - | 2 | 29 | 48_92 | 33.0 | 1120.0 | Domain | UBA |
Hgene | UBAP2 | chr9:34017048 | chr9:32988127 | ENST00000449054 | - | 2 | 30 | 48_92 | 33.0 | 1190.6666666666667 | Domain | UBA |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000309615 | 2 | 8 | 38_87 | 74.0 | 307.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379813 | 2 | 8 | 38_87 | 60.0 | 343.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379817 | 1 | 7 | 38_87 | 61.333333333333336 | 343.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379819 | 2 | 8 | 38_87 | 75.33333333333333 | 357.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379825 | 2 | 8 | 38_87 | 75.33333333333333 | 307.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000397172 | 2 | 8 | 38_87 | 75.33333333333333 | 285.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000436040 | 1 | 6 | 38_87 | 60.0 | 445.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000463596 | 2 | 8 | 38_87 | 61.333333333333336 | 343.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000468275 | 2 | 8 | 38_87 | 61.333333333333336 | 343.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000309615 | 1 | 8 | 38_87 | 58.333333333333336 | 307.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379813 | 1 | 8 | 38_87 | 44.333333333333336 | 343.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379817 | 0 | 7 | 38_87 | 44.333333333333336 | 343.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379819 | 1 | 8 | 38_87 | 58.333333333333336 | 357.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379825 | 1 | 8 | 38_87 | 58.333333333333336 | 307.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000397172 | 1 | 8 | 38_87 | 58.333333333333336 | 285.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000436040 | 0 | 6 | 38_87 | 44.333333333333336 | 445.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000463596 | 1 | 8 | 38_87 | 44.333333333333336 | 343.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000468275 | 1 | 8 | 38_87 | 44.333333333333336 | 343.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000309615 | 1 | 8 | 38_87 | 58.333333333333336 | 307.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379813 | 1 | 8 | 38_87 | 44.333333333333336 | 343.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379817 | 0 | 7 | 38_87 | 44.333333333333336 | 343.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379819 | 1 | 8 | 38_87 | 58.333333333333336 | 357.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379825 | 1 | 8 | 38_87 | 58.333333333333336 | 307.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000397172 | 1 | 8 | 38_87 | 58.333333333333336 | 285.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000436040 | 0 | 6 | 38_87 | 44.333333333333336 | 445.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000463596 | 1 | 8 | 38_87 | 44.333333333333336 | 343.0 | Domain | Note=FHA-like | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000468275 | 1 | 8 | 38_87 | 44.333333333333336 | 343.0 | Domain | Note=FHA-like |
Top |
Fusion Gene Sequence for UBAP2-APTX |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000449054_ENST00000436040_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(transcript)=1744nt_BP=201nt ATTGGCAGGTAACGAGCGGCGGCGGCGGCAGCGGGTCTTGGGTCCTCCGAGAGCAGCAGCGATTTTCTATTTTGTACATACATTATTTTG TATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAA CCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCA TTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTG TAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATG CTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCAC CTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGCCATGTACATCTTCATGTG ATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTG ATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAG CAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTG TGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACA AATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTG GTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGA CCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAA TCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTT CCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCAT CAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAAC AGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAG TAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGTAGAG >In-frame_ENST00000449054_ENST00000436040_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(amino acids)=172AA_start in transcript=128_stop in transcript=646 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE -------------------------------------------------------------- >In-frame_ENST00000379238_ENST00000436040_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(transcript)=1760nt_BP=217nt GCTTTGTAAGAGGCACATTGGCAGGTAACGAGCGGCGGCGGCGGCAGCGGGTCTTGGGTCCTCCGAGAGCAGCAGCGATTTTCTATTTTG TACATACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGC AGCACAATCAACGCAACCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGA GTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAA CTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGAT TCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAG AAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGCCA TGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCT AGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCG TTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTG AGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAAC ATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTC ATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAA GCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGG CATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGT AATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTC AGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTC CTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTG AGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATG >In-frame_ENST00000379238_ENST00000436040_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(amino acids)=172AA_start in transcript=144_stop in transcript=662 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000379825_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(transcript)=2036nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAA TCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTA TCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTAT AGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGG AAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAA AGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAA GGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACT CCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAA AAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGAGTAGCTGGGATTTGACTTTTCTTCCTTGCCTGCAGC TGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTG CCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGT GGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTT CACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTC TCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACA CTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCT TTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTC CCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTC TCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGG AAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCT TAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGT >In-frame_ENST00000360802_ENST00000379825_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(amino acids)=272AA_start in transcript=139_stop in transcript=957 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000309615_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(transcript)=2031nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAA TCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTA TCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTAT AGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGG AAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAA AGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAA GGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACT CCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAA AAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGAGTAGCTGGGATTTGACTTTTCTTCCTTGCCTGCAGC TGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTG CCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGT GGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTT CACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTC TCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACA CTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCT TTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTC CCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTC TCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGG AAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCT TAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGT >In-frame_ENST00000360802_ENST00000309615_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(amino acids)=272AA_start in transcript=139_stop in transcript=957 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000397172_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(transcript)=1774nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAA TCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGAATCCCTGGGCCA CTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCC AAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCA TATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTAT GAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATA CTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCC CCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAG AGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAAT TAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGG TTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGG AGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTC TGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTG TTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCC CTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGA GGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATT TGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGG >In-frame_ENST00000360802_ENST00000397172_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(amino acids)=250AA_start in transcript=139_stop in transcript=891 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMESLGHWSQGLKISMQDPKMQV YKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPC -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000379817_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(transcript)=1988nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAA TCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTA TCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTAT AGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGG AAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAA AGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAA GGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACT CCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAA AAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAAC TGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGA ACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATT CTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTA GAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCA TCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGT TATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCC TGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCT TCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATG ATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAG TCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAAT CACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGTAGAGCCACTACTTTCTTTTTCCCTGAGAATAAATTT >In-frame_ENST00000360802_ENST00000379817_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(amino acids)=322AA_start in transcript=139_stop in transcript=1107 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000379819_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(transcript)=1857nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAA TCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTA TCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTAT AGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGG AAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAA AGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAA GGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACT CCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAA AAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAAC TGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGA ACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATT CTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTA GAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCA TCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGT TATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCC TGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCT TCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATG ATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAG >In-frame_ENST00000360802_ENST00000379819_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(amino acids)=322AA_start in transcript=139_stop in transcript=1107 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000468275_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(transcript)=1441nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAA TCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTA TCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTAT AGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGG AAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAA AGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAA GGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACT CCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAA AAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAAC TGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGA ACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATT CTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTA GAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCA TCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGT >In-frame_ENST00000360802_ENST00000468275_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(amino acids)=322AA_start in transcript=139_stop in transcript=1107 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000463596_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(transcript)=1230nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAA TCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTA TCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTAT AGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGG AAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAA AGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAA GGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACT CCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAA AAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAAC TGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGA ACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATT >In-frame_ENST00000360802_ENST00000463596_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(amino acids)=322AA_start in transcript=139_stop in transcript=1107 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000379825_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(transcript)=2016nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCATTGACTCAG TCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTG AGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGG AAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAA AGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGA TAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACC TTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACC ACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATT CTTTCAATACAGAATACTTCCTAGAATCACAAGAGTAGCTGGGATTTGACTTTTCTTCCTTGCCTGCAGCTGTGATCGAGATGGTACAAG AGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCA TTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAA ACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATT GAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGA TATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATG GAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGT GGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCT TAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGA GAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCA TGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTG AAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGTAGAGCCACTACTTTCTTTTT >In-frame_ENST00000418786_ENST00000379825_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(amino acids)=272AA_start in transcript=119_stop in transcript=937 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000309615_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(transcript)=2011nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCATTGACTCAG TCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTG AGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGG AAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAA AGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGA TAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACC TTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACC ACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATT CTTTCAATACAGAATACTTCCTAGAATCACAAGAGTAGCTGGGATTTGACTTTTCTTCCTTGCCTGCAGCTGTGATCGAGATGGTACAAG AGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCA TTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAA ACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATT GAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGA TATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATG GAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGT GGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCT TAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGA GAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCA TGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTG AAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGTAGAGCCACTACTTTCTTTTT >In-frame_ENST00000418786_ENST00000309615_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(amino acids)=272AA_start in transcript=119_stop in transcript=937 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000397172_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(transcript)=1754nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCATTGACTCAG TCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGA TTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGC TGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAA AGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATG TGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTG TGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCC AGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGG TGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCA CAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTC TGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACT GACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTT AATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCC TTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTC ATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAA ACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTA AGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGTAG >In-frame_ENST00000418786_ENST00000397172_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(amino acids)=250AA_start in transcript=119_stop in transcript=871 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMESLGHWSQGLKISMQDPKMQV YKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPC -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000379817_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(transcript)=1968nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCATTGACTCAG TCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTG AGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGG AAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAA AGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGA TAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACC TTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACC ACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATT CTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTG AGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGA CACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTC TACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCA GGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTC AGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAG ATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTT GTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAG ATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGT TTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCT GAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGC >In-frame_ENST00000418786_ENST00000379817_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(amino acids)=322AA_start in transcript=119_stop in transcript=1087 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000379819_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(transcript)=1837nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCATTGACTCAG TCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTG AGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGG AAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAA AGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGA TAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACC TTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACC ACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATT CTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTG AGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGA CACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTC TACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCA GGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTC AGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAG ATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTT GTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAG ATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGT TTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCT >In-frame_ENST00000418786_ENST00000379819_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(amino acids)=322AA_start in transcript=119_stop in transcript=1087 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000468275_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(transcript)=1421nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCATTGACTCAG TCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTG AGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGG AAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAA AGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGA TAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACC TTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACC ACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATT CTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTG AGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGA CACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTC TACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCA GGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTC >In-frame_ENST00000418786_ENST00000468275_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(amino acids)=322AA_start in transcript=119_stop in transcript=1087 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000463596_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(transcript)=1210nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCATTGACTCAG TCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTG AGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGG AAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAA AGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGA TAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACC TTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACC ACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATT CTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTG AGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGA CACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTC >In-frame_ENST00000418786_ENST00000463596_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988122_length(amino acids)=322AA_start in transcript=119_stop in transcript=1087 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000449054_ENST00000309615_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(transcript)=1973nt_BP=201nt ATTGGCAGGTAACGAGCGGCGGCGGCGGCAGCGGGTCTTGGGTCCTCCGAGAGCAGCAGCGATTTTCTATTTTGTACATACATTATTTTG TATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAA CCACAGAAACAAGTGGTACAGGTAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCT GGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGG AAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAAC TCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATT TCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTG GTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAG GTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTG ATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGAGTAG CTGGGATTTGACTTTTCTTCCTTGCCTGCAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAG CTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACA CAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTA CTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGG ATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAG GTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGAT TTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGT TTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGAT TACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTT TCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGA AAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCAT >In-frame_ENST00000449054_ENST00000309615_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(amino acids)=270AA_start in transcript=87_stop in transcript=899 MYILYMMTSVSSDHCRGAREKPQISAAQSTQPQKQVVQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETH RKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHW LVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQE -------------------------------------------------------------- >In-frame_ENST00000449054_ENST00000436040_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(transcript)=1697nt_BP=201nt ATTGGCAGGTAACGAGCGGCGGCGGCGGCAGCGGGTCTTGGGTCCTCCGAGAGCAGCAGCGATTTTCTATTTTGTACATACATTATTTTG TATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAA CCACAGAAACAAGTGGTACAGGTAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCT GGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGG AAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAAC TCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATT TCTATGCAGGACCCCAAAATGCAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTG GAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGAT GCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCA CTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGA ACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTA CTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCC ATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTT CTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGG GTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTAT CCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTT GGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGT TGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCT >In-frame_ENST00000449054_ENST00000436040_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(amino acids)=170AA_start in transcript=87_stop in transcript=599 MYILYMMTSVSSDHCRGAREKPQISAAQSTQPQKQVVQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETH -------------------------------------------------------------- >In-frame_ENST00000379238_ENST00000309615_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(transcript)=1989nt_BP=217nt GCTTTGTAAGAGGCACATTGGCAGGTAACGAGCGGCGGCGGCGGCAGCGGGTCTTGGGTCCTCCGAGAGCAGCAGCGATTTTCTATTTTG TACATACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGC AGCACAATCAACGCAACCACAGAAACAAGTGGTACAGGTAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGA GGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGG CCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCT GGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAG TCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGC CCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCA CACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCA TGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCT AGAATCACAAGAGTAGCTGGGATTTGACTTTTCTTCCTTGCCTGCAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCG AGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCT CAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGT TGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGG CTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCA GAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACA TTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGA TACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATG CCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTG TGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCT TGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGC ATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGTAGAGCCACTACTTTCTTTTTCCCTGAGAATAAATTTGGATAA >In-frame_ENST00000379238_ENST00000309615_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(amino acids)=270AA_start in transcript=103_stop in transcript=915 MYILYMMTSVSSDHCRGAREKPQISAAQSTQPQKQVVQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETH RKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHW LVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQE -------------------------------------------------------------- >In-frame_ENST00000379238_ENST00000436040_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(transcript)=1713nt_BP=217nt GCTTTGTAAGAGGCACATTGGCAGGTAACGAGCGGCGGCGGCGGCAGCGGGTCTTGGGTCCTCCGAGAGCAGCAGCGATTTTCTATTTTG TACATACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGC AGCACAATCAACGCAACCACAGAAACAAGTGGTACAGGTAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGA GGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGG CCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCT GGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAG TCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTA AAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAA CTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAG AACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTAT TCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGT AGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACC ATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGG TTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATC CTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCC TTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGAT GATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAA GTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAA TCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGTAGAGCCACTACTTTCTTTTTCCCTGAGAATAAATT >In-frame_ENST00000379238_ENST00000436040_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(amino acids)=170AA_start in transcript=103_stop in transcript=615 MYILYMMTSVSSDHCRGAREKPQISAAQSTQPQKQVVQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETH -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000379825_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(transcript)=1985nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCT GCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAAC ACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGG GAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTT GAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCA TTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGG GGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCT TCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACA AGAGTAGCTGGGATTTGACTTTTCTTCCTTGCCTGCAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGAT GCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCA CTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGA ACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTA CTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCC ATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTT CTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGG GTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTAT CCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTT GGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGT TGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCT GATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGTAGAGCCACTACTTTCTTTTTCCCTGAGAATAAATTTGGATAAAACAGTTGT >In-frame_ENST00000360802_ENST00000379825_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(amino acids)=255AA_start in transcript=139_stop in transcript=906 MSRCSGKTTDFSSTINATTETSGTGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGNSDSIERD AAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVA -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000397172_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(transcript)=1723nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCT GCAGCCTGGCCAGGTTCTCCACATGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTA CAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCT GAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAA ACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCT TAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGT AACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAA AGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCT ATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAAT GTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCA CCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCT GGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTA TCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGT CCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAG ATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTG AAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAAC AATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGTAGAGCCACTACTTTCTTTTTCCCTGAGAATAAA >In-frame_ENST00000360802_ENST00000397172_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(amino acids)=233AA_start in transcript=139_stop in transcript=840 MSRCSGKTTDFSSTINATTETSGTGVNPTSIDSVVIGKDQEVKLQPGQVLHMESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKAR YHWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLE -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000379817_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(transcript)=1937nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCT GCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAAC ACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGG GAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTT GAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCA TTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGG GGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCT TCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACA AGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGA GTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGC TGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTT TTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTA TTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTC ACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAA CCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTT TTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCT GTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTG AGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTC TCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTG >In-frame_ENST00000360802_ENST00000379817_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(amino acids)=305AA_start in transcript=139_stop in transcript=1056 MSRCSGKTTDFSSTINATTETSGTGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGNSDSIERD AAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVA REHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRD -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000379819_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(transcript)=1806nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCT GCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAAC ACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGG GAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTT GAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCA TTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGG GGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCT TCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACA AGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGA GTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGC TGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTT TTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTA TTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTC ACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAA CCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTT TTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCT GTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTG AGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTC >In-frame_ENST00000360802_ENST00000379819_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(amino acids)=305AA_start in transcript=139_stop in transcript=1056 MSRCSGKTTDFSSTINATTETSGTGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGNSDSIERD AAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVA REHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRD -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000468275_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(transcript)=1390nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCT GCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAAC ACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGG GAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTT GAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCA TTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGG GGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCT TCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACA AGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGA GTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGC TGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTT TTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTA TTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTC >In-frame_ENST00000360802_ENST00000468275_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(amino acids)=305AA_start in transcript=139_stop in transcript=1056 MSRCSGKTTDFSSTINATTETSGTGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGNSDSIERD AAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVA REHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRD -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000463596_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(transcript)=1179nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCT GCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAAC ACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGG GAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTT GAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCA TTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGG GGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCT TCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACA AGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGA GTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGC TGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTT >In-frame_ENST00000360802_ENST00000463596_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(amino acids)=305AA_start in transcript=139_stop in transcript=1056 MSRCSGKTTDFSSTINATTETSGTGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGNSDSIERD AAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVA REHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRD -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000379825_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(transcript)=1965nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCC ACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGAT CAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCT CTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACC CCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGA CCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATT TTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATT TTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGAGTAGCTGGGATTTGACT TTTCTTCCTTGCCTGCAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGC CCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCA GAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAA TTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGG GTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGG GAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCT CTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCT GTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTC CCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCG AGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAAT TTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTG >In-frame_ENST00000418786_ENST00000379825_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(amino acids)=255AA_start in transcript=119_stop in transcript=886 MSRCSGKTTDFSSTINATTETSGTGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGNSDSIERD AAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVA -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000397172_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(transcript)=1703nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCC ACATGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGG TGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAAC ACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCT ACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGA ATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGC CTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACT GGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAAC TTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACT TCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCAT GTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCT TAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGT CTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCC CAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGG AGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTG TCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGA >In-frame_ENST00000418786_ENST00000397172_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(amino acids)=233AA_start in transcript=119_stop in transcript=820 MSRCSGKTTDFSSTINATTETSGTGVNPTSIDSVVIGKDQEVKLQPGQVLHMESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKAR YHWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLE -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000379817_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(transcript)=1917nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCC ACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGAT CAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCT CTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACC CCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGA CCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATT TTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATT TTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTAC AAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTT CCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAG CAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATT ATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTG GGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGT ATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAG AGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAG GCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAG TGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCG TCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTA TTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGTAGAGCCACTACTTTCTT >In-frame_ENST00000418786_ENST00000379817_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(amino acids)=305AA_start in transcript=119_stop in transcript=1036 MSRCSGKTTDFSSTINATTETSGTGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGNSDSIERD AAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVA REHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRD -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000379819_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(transcript)=1786nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCC ACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGAT CAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCT CTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACC CCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGA CCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATT TTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATT TTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTAC AAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTT CCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAG CAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATT ATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTG GGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGT ATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAG AGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAG GCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAG TGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCG >In-frame_ENST00000418786_ENST00000379819_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(amino acids)=305AA_start in transcript=119_stop in transcript=1036 MSRCSGKTTDFSSTINATTETSGTGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGNSDSIERD AAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVA REHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRD -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000468275_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(transcript)=1370nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCC ACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGAT CAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCT CTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACC CCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGA CCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATT TTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATT TTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTAC AAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTT CCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAG CAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATT ATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTG GGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGT >In-frame_ENST00000418786_ENST00000468275_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(amino acids)=305AA_start in transcript=119_stop in transcript=1036 MSRCSGKTTDFSSTINATTETSGTGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGNSDSIERD AAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVA REHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRD -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000463596_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(transcript)=1159nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCC ACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGAT CAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCT CTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACC CCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGA CCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATT TTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATT TTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTAC AAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTT CCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAG >In-frame_ENST00000418786_ENST00000463596_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32987844_length(amino acids)=305AA_start in transcript=119_stop in transcript=1036 MSRCSGKTTDFSSTINATTETSGTGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLETHRKRKRSGNSDSIERD AAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVA REHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRD -------------------------------------------------------------- >In-frame_ENST00000449054_ENST00000436040_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(transcript)=1744nt_BP=201nt ATTGGCAGGTAACGAGCGGCGGCGGCGGCAGCGGGTCTTGGGTCCTCCGAGAGCAGCAGCGATTTTCTATTTTGTACATACATTATTTTG TATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAA CCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCA TTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTG TAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATG CTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCAC CTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGCCATGTACATCTTCATGTG ATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTG ATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAG CAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTG TGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACA AATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTG GTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGA CCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAA TCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTT CCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCAT CAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAAC AGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAG TAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGTAGAG >In-frame_ENST00000449054_ENST00000436040_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(amino acids)=172AA_start in transcript=128_stop in transcript=646 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE -------------------------------------------------------------- >In-frame_ENST00000379238_ENST00000436040_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(transcript)=1760nt_BP=217nt GCTTTGTAAGAGGCACATTGGCAGGTAACGAGCGGCGGCGGCGGCAGCGGGTCTTGGGTCCTCCGAGAGCAGCAGCGATTTTCTATTTTG TACATACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGC AGCACAATCAACGCAACCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGA GTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAA CTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGAT TCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAG AAGGGAAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGCCA TGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCT AGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCG TTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTG AGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAAC ATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTC ATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAA GCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGG CATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGT AATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTC AGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTC CTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTG AGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATG >In-frame_ENST00000379238_ENST00000436040_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(amino acids)=172AA_start in transcript=144_stop in transcript=662 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000379825_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(transcript)=2036nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAA TCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTA TCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTAT AGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGG AAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAA AGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAA GGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACT CCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAA AAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGAGTAGCTGGGATTTGACTTTTCTTCCTTGCCTGCAGC TGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTG CCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGT GGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTT CACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTC TCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACA CTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCT TTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTC CCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTC TCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGG AAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCT TAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGT >In-frame_ENST00000360802_ENST00000379825_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(amino acids)=272AA_start in transcript=139_stop in transcript=957 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000309615_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(transcript)=2031nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAA TCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTA TCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTAT AGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGG AAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAA AGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAA GGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACT CCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAA AAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGAGTAGCTGGGATTTGACTTTTCTTCCTTGCCTGCAGC TGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTG CCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGT GGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTT CACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTC TCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACA CTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCT TTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTC CCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTC TCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGG AAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCT TAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGT >In-frame_ENST00000360802_ENST00000309615_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(amino acids)=272AA_start in transcript=139_stop in transcript=957 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000397172_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(transcript)=1774nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAA TCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGAATCCCTGGGCCA CTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCC AAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCA TATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTAT GAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATA CTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCC CCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAG AGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAAT TAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGG TTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGG AGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTC TGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTG TTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCC CTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGA GGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATT TGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGG >In-frame_ENST00000360802_ENST00000397172_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(amino acids)=250AA_start in transcript=139_stop in transcript=891 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMESLGHWSQGLKISMQDPKMQV YKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPC -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000379817_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(transcript)=1988nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAA TCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTA TCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTAT AGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGG AAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAA AGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAA GGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACT CCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAA AAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAAC TGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGA ACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATT CTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTA GAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCA TCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGT TATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCC TGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCT TCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATG ATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAG TCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAAT CACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGTAGAGCCACTACTTTCTTTTTCCCTGAGAATAAATTT >In-frame_ENST00000360802_ENST00000379817_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(amino acids)=322AA_start in transcript=139_stop in transcript=1107 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000379819_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(transcript)=1857nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAA TCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTA TCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTAT AGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGG AAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAA AGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAA GGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACT CCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAA AAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAAC TGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGA ACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATT CTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTA GAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCA TCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGT TATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCC TGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCT TCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATG ATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAG >In-frame_ENST00000360802_ENST00000379819_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(amino acids)=322AA_start in transcript=139_stop in transcript=1107 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000468275_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(transcript)=1441nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAA TCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTA TCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTAT AGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGG AAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAA AGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAA GGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACT CCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAA AAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAAC TGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGA ACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATT CTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTA GAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCA TCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGT >In-frame_ENST00000360802_ENST00000468275_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(amino acids)=322AA_start in transcript=139_stop in transcript=1107 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000360802_ENST00000463596_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(transcript)=1230nt_BP=212nt GTGACGCGAGGTCACGTGACGGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACAT ACATTATTTTGTATATACTGTATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCAC AATCAACGCAACCACAGAAACAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAA TCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTA TCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTAT AGAAAGGGATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGG AAAAGATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAA AGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAA GGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACT CCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAA AAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAAC TGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGA ACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATT >In-frame_ENST00000360802_ENST00000463596_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(amino acids)=322AA_start in transcript=139_stop in transcript=1107 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000379825_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(transcript)=2016nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCATTGACTCAG TCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTG AGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGG AAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAA AGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGA TAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACC TTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACC ACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATT CTTTCAATACAGAATACTTCCTAGAATCACAAGAGTAGCTGGGATTTGACTTTTCTTCCTTGCCTGCAGCTGTGATCGAGATGGTACAAG AGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCA TTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAA ACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATT GAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGA TATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATG GAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGT GGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCT TAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGA GAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCA TGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTG AAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGTAGAGCCACTACTTTCTTTTT >In-frame_ENST00000418786_ENST00000379825_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(amino acids)=272AA_start in transcript=119_stop in transcript=937 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000309615_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(transcript)=2011nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCATTGACTCAG TCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTG AGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGG AAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAA AGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGA TAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACC TTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACC ACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATT CTTTCAATACAGAATACTTCCTAGAATCACAAGAGTAGCTGGGATTTGACTTTTCTTCCTTGCCTGCAGCTGTGATCGAGATGGTACAAG AGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCA TTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAA ACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATT GAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGA TATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATG GAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGT GGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCT TAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGA GAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCA TGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTG AAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGTAGAGCCACTACTTTCTTTTT >In-frame_ENST00000418786_ENST00000309615_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(amino acids)=272AA_start in transcript=119_stop in transcript=937 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000397172_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(transcript)=1754nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCATTGACTCAG TCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGA TTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGC TGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAA AGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATG TGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTG TGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCC AGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGG TGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTCTACTCATTTCCTAAATTAAAACATGCAGCTTTTTCA CAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCAGGATTAGGAATTTGGGTTTGTCATAGATGTATTCTC TGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTCAGGTCTGACCATTGGGAGCAAAGCCATGTTCACACT GACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAGATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTT AATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTTGTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCC TTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAGATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTC ATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGTTTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAA ACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCTGAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTA AGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGCATGGAAAGGTGGTTGGTGAATGAAAAAGTTGCGTAG >In-frame_ENST00000418786_ENST00000397172_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(amino acids)=250AA_start in transcript=119_stop in transcript=871 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMESLGHWSQGLKISMQDPKMQV YKDEQVVVIKDKYPKARYHWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPC -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000379817_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(transcript)=1968nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCATTGACTCAG TCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTG AGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGG AAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAA AGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGA TAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACC TTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACC ACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATT CTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTG AGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGA CACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTC TACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCA GGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTC AGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAG ATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTT GTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAG ATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGT TTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCT GAAAATAAAGTTAATTTGTTTGAGGCATCTCTCTTAAGTAGGTGGAAACTATTGAAGTTCAGCTAACAATCACAGCATAGGTTCTGATGC >In-frame_ENST00000418786_ENST00000379817_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(amino acids)=322AA_start in transcript=119_stop in transcript=1087 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000379819_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(transcript)=1837nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCATTGACTCAG TCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTG AGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGG AAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAA AGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGA TAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACC TTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACC ACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATT CTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTG AGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGA CACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTC TACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCA GGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTC AGGTCTGACCATTGGGAGCAAAGCCATGTTCACACTGACCTAATGCAGAGTATGGAAGCATTGGGCTGGTTATACATTTCTGTTTCTTAG ATTTATCCTCCGCCTCTGTAGGCATGGACAACCTTTAATCAGAGCATCTAGAGTGGCCTCTTGTTTATCCTGAAGATACTGATGGGTCTT GTTTTCTGTTAGTCTGTTTTGTAATATTCTTTTCCCTTCCTTCATGGGGAGGCTTAGTTTGTCCAGTCCTTCCATGCCCTTCTATCCCAG ATTACCTAAATGTTCCCTTCTCAGGAATTCTGTCTCATCAGTTCTTCACAGTGAGAAAAGAGGCTAGATGATGGTGTGGGGGGTTGGAGT TTTCTTCTAATACCGAGGGTTCCTGGCTGTGAGGAAACAGCCACATGTTCGTCATGATTGAGCTGTGAAGTCTTCTTGGACCTGTTGTCT >In-frame_ENST00000418786_ENST00000379819_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(amino acids)=322AA_start in transcript=119_stop in transcript=1087 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000468275_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(transcript)=1421nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCATTGACTCAG TCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTG AGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGG AAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAA AGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGA TAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACC TTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACC ACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATT CTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTG AGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGA CACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTC TACTCATTTCCTAAATTAAAACATGCAGCTTTTTCACAAATTTATTCTATTATTGAGTGGCCACAATGTAGAGTGGCTCAAAGTACTTCA GGATTAGGAATTTGGGTTTGTCATAGATGTATTCTCTGGTGAGGGTGGCTGGGATATACCTGACCCACCATCTTCAGAAGGACCCATGTC >In-frame_ENST00000418786_ENST00000468275_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(amino acids)=322AA_start in transcript=119_stop in transcript=1087 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- >In-frame_ENST00000418786_ENST00000463596_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(transcript)=1210nt_BP=192nt GGGTTGGGCAGCCTGTGCCGCCGCCGCCGCTTTGTAAGAGGCACATTGGCAGATTTTCTATTTTGTACATACATTATTTTGTATATACTG TATATGATGACTTCAGTGAGCAGTGACCATTGTCGAGGTGCTCGGGAAAAACCACAGATTTCAGCAGCACAATCAACGCAACCACAGAAA CAAGTGGTACAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGAGTCAATCCCACCAGCATTGACTCAG TCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTG AGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGG AAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTATCAAAA AGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGA TAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACC TTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACC ACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAATT CTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATGGTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGATGCCTG AGCTCTTGAAGCTGCCCCTTCGTTGTCATGAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGA CACAGTGATTCTGCAGAGCCTGAGCTGCTGCTGTGGTGTGGCCCACTGGAGCAAACTGCTGGCACCTATTCTGGGTTGCTTGTGAACTTC >In-frame_ENST00000418786_ENST00000463596_TCGA-78-7150-01A_UBAP2_chr9_34017048_-_APTX_chr9_32988127_length(amino acids)=322AA_start in transcript=119_stop in transcript=1087 MSRCSGKTTDFSSTINATTETSGTVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFEEEAKNPGLE THRKRKRSGNSDSIERDAAQEAEAGTGLEPGSNSGQCSVPLKKGKDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARY HWLVLPWTSISSLKAVAREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLES -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for UBAP2-APTX |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000309615 | 2 | 8 | 207_211 | 74.0 | 307.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000309615 | 2 | 8 | 269_270 | 74.0 | 307.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379813 | 2 | 8 | 207_211 | 60.0 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379813 | 2 | 8 | 269_270 | 60.0 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379817 | 1 | 7 | 207_211 | 61.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379817 | 1 | 7 | 269_270 | 61.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379819 | 2 | 8 | 207_211 | 75.33333333333333 | 357.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379819 | 2 | 8 | 269_270 | 75.33333333333333 | 357.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379825 | 2 | 8 | 207_211 | 75.33333333333333 | 307.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000379825 | 2 | 8 | 269_270 | 75.33333333333333 | 307.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000397172 | 2 | 8 | 207_211 | 75.33333333333333 | 285.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000397172 | 2 | 8 | 269_270 | 75.33333333333333 | 285.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000436040 | 1 | 6 | 207_211 | 60.0 | 445.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000436040 | 1 | 6 | 269_270 | 60.0 | 445.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000463596 | 2 | 8 | 207_211 | 61.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000463596 | 2 | 8 | 269_270 | 61.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000468275 | 2 | 8 | 207_211 | 61.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000468275 | 2 | 8 | 269_270 | 61.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000476858 | 0 | 7 | 207_211 | 0 | 303.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32987844 | ENST00000476858 | 0 | 7 | 269_270 | 0 | 303.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000309615 | 1 | 8 | 207_211 | 58.333333333333336 | 307.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000309615 | 1 | 8 | 269_270 | 58.333333333333336 | 307.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379813 | 1 | 8 | 207_211 | 44.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379813 | 1 | 8 | 269_270 | 44.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379817 | 0 | 7 | 207_211 | 44.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379817 | 0 | 7 | 269_270 | 44.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379819 | 1 | 8 | 207_211 | 58.333333333333336 | 357.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379819 | 1 | 8 | 269_270 | 58.333333333333336 | 357.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379825 | 1 | 8 | 207_211 | 58.333333333333336 | 307.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000379825 | 1 | 8 | 269_270 | 58.333333333333336 | 307.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000397172 | 1 | 8 | 207_211 | 58.333333333333336 | 285.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000397172 | 1 | 8 | 269_270 | 58.333333333333336 | 285.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000436040 | 0 | 6 | 207_211 | 44.333333333333336 | 445.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000436040 | 0 | 6 | 269_270 | 44.333333333333336 | 445.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000463596 | 1 | 8 | 207_211 | 44.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000463596 | 1 | 8 | 269_270 | 44.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000468275 | 1 | 8 | 207_211 | 44.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000468275 | 1 | 8 | 269_270 | 44.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000476858 | 0 | 7 | 207_211 | 0 | 303.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988122 | ENST00000476858 | 0 | 7 | 269_270 | 0 | 303.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000309615 | 1 | 8 | 207_211 | 58.333333333333336 | 307.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000309615 | 1 | 8 | 269_270 | 58.333333333333336 | 307.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379813 | 1 | 8 | 207_211 | 44.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379813 | 1 | 8 | 269_270 | 44.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379817 | 0 | 7 | 207_211 | 44.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379817 | 0 | 7 | 269_270 | 44.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379819 | 1 | 8 | 207_211 | 58.333333333333336 | 357.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379819 | 1 | 8 | 269_270 | 58.333333333333336 | 357.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379825 | 1 | 8 | 207_211 | 58.333333333333336 | 307.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000379825 | 1 | 8 | 269_270 | 58.333333333333336 | 307.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000397172 | 1 | 8 | 207_211 | 58.333333333333336 | 285.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000397172 | 1 | 8 | 269_270 | 58.333333333333336 | 285.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000436040 | 0 | 6 | 207_211 | 44.333333333333336 | 445.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000436040 | 0 | 6 | 269_270 | 44.333333333333336 | 445.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000463596 | 1 | 8 | 207_211 | 44.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000463596 | 1 | 8 | 269_270 | 44.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000468275 | 1 | 8 | 207_211 | 44.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000468275 | 1 | 8 | 269_270 | 44.333333333333336 | 343.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000476858 | 0 | 7 | 207_211 | 0 | 303.0 | DNA substrate | |
Tgene | APTX | chr9:34017048 | chr9:32988127 | ENST00000476858 | 0 | 7 | 269_270 | 0 | 303.0 | DNA substrate |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
Related Drugs for UBAP2-APTX |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for UBAP2-APTX |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | UBAP2 | C0001973 | Alcoholic Intoxication, Chronic | 1 | PSYGENET |
Tgene | APTX | C1859598 | ATAXIA, EARLY-ONSET, WITH OCULOMOTOR APRAXIA AND HYPOALBUMINEMIA | 11 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Tgene | APTX | C0013421 | Dystonia | 1 | GENOMICS_ENGLAND |
Tgene | APTX | C0598589 | Inherited neuropathies | 1 | GENOMICS_ENGLAND |
Tgene | APTX | C1853761 | SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 1 | 1 | GENOMICS_ENGLAND |