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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:UBXN1-C11orf80 (FusionGDB2 ID:95843) |
Fusion Gene Summary for UBXN1-C11orf80 |
Fusion gene summary |
Fusion gene information | Fusion gene name: UBXN1-C11orf80 | Fusion gene ID: 95843 | Hgene | Tgene | Gene symbol | UBXN1 | C11orf80 | Gene ID | 51035 | 79703 |
Gene name | UBX domain protein 1 | chromosome 11 open reading frame 80 | |
Synonyms | 2B28|SAKS1|UBXD10 | HYDM4|TOP6BL|TOPOVIBL | |
Cytomap | 11q12.3 | 11q13.2 | |
Type of gene | protein-coding | protein-coding | |
Description | UBX domain-containing protein 1SAPK substrate protein 1UBA/UBX 33.3 kDa protein | type 2 DNA topoisomerase 6 subunit B-liketype 2 DNA topoisomerase VI subunit B-like | |
Modification date | 20200320 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000294119, ENST00000301935, ENST00000533000, ENST00000529640, ENST00000524762, | ENST00000346672, ENST00000360962, ENST00000527634, ENST00000540737, ENST00000532565, ENST00000525449, ENST00000527368, | |
Fusion gene scores | * DoF score | 4 X 4 X 3=48 | 19 X 19 X 10=3610 |
# samples | 5 | 24 | |
** MAII score | log2(5/48*10)=0.0588936890535686 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(24/3610*10)=-3.91089252616601 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: UBXN1 [Title/Abstract] AND C11orf80 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | UBXN1(62444285)-C11orf80(66583524), # samples:1 UBXN1(62444990)-C11orf80(66583524), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | UBXN1-C11orf80 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | UBXN1 | GO:0031397 | negative regulation of protein ubiquitination | 20351172 |
Hgene | UBXN1 | GO:0032435 | negative regulation of proteasomal ubiquitin-dependent protein catabolic process | 20351172 |
Hgene | UBXN1 | GO:1903094 | negative regulation of protein K48-linked deubiquitination | 21135095 |
Hgene | UBXN1 | GO:2000157 | negative regulation of ubiquitin-specific protease activity | 21135095 |
Fusion gene breakpoints across UBXN1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across C11orf80 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-GI-A2C8-01A | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
ChimerDB4 | BRCA | TCGA-GI-A2C8-01A | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
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Fusion Gene ORF analysis for UBXN1-C11orf80 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000294119 | ENST00000346672 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000294119 | ENST00000360962 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000294119 | ENST00000527634 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000294119 | ENST00000540737 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000294119 | ENST00000532565 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000294119 | ENST00000525449 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-intron | ENST00000294119 | ENST00000527368 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
In-frame | ENST00000301935 | ENST00000346672 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
In-frame | ENST00000301935 | ENST00000360962 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
In-frame | ENST00000301935 | ENST00000527634 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
In-frame | ENST00000301935 | ENST00000540737 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
In-frame | ENST00000301935 | ENST00000532565 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
In-frame | ENST00000301935 | ENST00000525449 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
5CDS-intron | ENST00000301935 | ENST00000527368 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000533000 | ENST00000346672 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000533000 | ENST00000360962 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000533000 | ENST00000527634 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000533000 | ENST00000540737 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000533000 | ENST00000532565 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000533000 | ENST00000525449 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-intron | ENST00000533000 | ENST00000527368 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
In-frame | ENST00000529640 | ENST00000346672 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
In-frame | ENST00000529640 | ENST00000360962 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
In-frame | ENST00000529640 | ENST00000527634 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
In-frame | ENST00000529640 | ENST00000540737 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
In-frame | ENST00000529640 | ENST00000532565 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
In-frame | ENST00000529640 | ENST00000525449 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
5CDS-intron | ENST00000529640 | ENST00000527368 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000524762 | ENST00000346672 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000524762 | ENST00000360962 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000524762 | ENST00000527634 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000524762 | ENST00000540737 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000524762 | ENST00000532565 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-3CDS | ENST00000524762 | ENST00000525449 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
intron-intron | ENST00000524762 | ENST00000527368 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000294119 | ENST00000346672 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000294119 | ENST00000360962 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000294119 | ENST00000527634 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000294119 | ENST00000540737 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000294119 | ENST00000532565 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000294119 | ENST00000525449 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
5CDS-intron | ENST00000294119 | ENST00000527368 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000301935 | ENST00000346672 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000301935 | ENST00000360962 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000301935 | ENST00000527634 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000301935 | ENST00000540737 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000301935 | ENST00000532565 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000301935 | ENST00000525449 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
5CDS-intron | ENST00000301935 | ENST00000527368 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000533000 | ENST00000346672 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000533000 | ENST00000360962 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000533000 | ENST00000527634 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000533000 | ENST00000540737 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000533000 | ENST00000532565 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000533000 | ENST00000525449 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
5CDS-intron | ENST00000533000 | ENST00000527368 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000529640 | ENST00000346672 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000529640 | ENST00000360962 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000529640 | ENST00000527634 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000529640 | ENST00000540737 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000529640 | ENST00000532565 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
Frame-shift | ENST00000529640 | ENST00000525449 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
5CDS-intron | ENST00000529640 | ENST00000527368 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
5UTR-3CDS | ENST00000524762 | ENST00000346672 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
5UTR-3CDS | ENST00000524762 | ENST00000360962 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
5UTR-3CDS | ENST00000524762 | ENST00000527634 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
5UTR-3CDS | ENST00000524762 | ENST00000540737 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
5UTR-3CDS | ENST00000524762 | ENST00000532565 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
5UTR-3CDS | ENST00000524762 | ENST00000525449 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
5UTR-intron | ENST00000524762 | ENST00000527368 | UBXN1 | chr11 | 62444990 | - | C11orf80 | chr11 | 66583524 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000301935 | UBXN1 | chr11 | 62444285 | - | ENST00000346672 | C11orf80 | chr11 | 66583524 | + | 1839 | 1011 | 92 | 1744 | 550 |
ENST00000301935 | UBXN1 | chr11 | 62444285 | - | ENST00000360962 | C11orf80 | chr11 | 66583524 | + | 2138 | 1011 | 92 | 1855 | 587 |
ENST00000301935 | UBXN1 | chr11 | 62444285 | - | ENST00000527634 | C11orf80 | chr11 | 66583524 | + | 1912 | 1011 | 92 | 1855 | 587 |
ENST00000301935 | UBXN1 | chr11 | 62444285 | - | ENST00000540737 | C11orf80 | chr11 | 66583524 | + | 1941 | 1011 | 92 | 1852 | 586 |
ENST00000301935 | UBXN1 | chr11 | 62444285 | - | ENST00000532565 | C11orf80 | chr11 | 66583524 | + | 1912 | 1011 | 92 | 1855 | 587 |
ENST00000301935 | UBXN1 | chr11 | 62444285 | - | ENST00000525449 | C11orf80 | chr11 | 66583524 | + | 1835 | 1011 | 92 | 1744 | 550 |
ENST00000529640 | UBXN1 | chr11 | 62444285 | - | ENST00000346672 | C11orf80 | chr11 | 66583524 | + | 1802 | 974 | 67 | 1707 | 546 |
ENST00000529640 | UBXN1 | chr11 | 62444285 | - | ENST00000360962 | C11orf80 | chr11 | 66583524 | + | 2101 | 974 | 67 | 1818 | 583 |
ENST00000529640 | UBXN1 | chr11 | 62444285 | - | ENST00000527634 | C11orf80 | chr11 | 66583524 | + | 1875 | 974 | 67 | 1818 | 583 |
ENST00000529640 | UBXN1 | chr11 | 62444285 | - | ENST00000540737 | C11orf80 | chr11 | 66583524 | + | 1904 | 974 | 67 | 1815 | 582 |
ENST00000529640 | UBXN1 | chr11 | 62444285 | - | ENST00000532565 | C11orf80 | chr11 | 66583524 | + | 1875 | 974 | 67 | 1818 | 583 |
ENST00000529640 | UBXN1 | chr11 | 62444285 | - | ENST00000525449 | C11orf80 | chr11 | 66583524 | + | 1798 | 974 | 67 | 1707 | 546 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000301935 | ENST00000346672 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + | 0.028445797 | 0.9715542 |
ENST00000301935 | ENST00000360962 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + | 0.029295243 | 0.97070473 |
ENST00000301935 | ENST00000527634 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + | 0.04095563 | 0.9590444 |
ENST00000301935 | ENST00000540737 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + | 0.03646804 | 0.96353203 |
ENST00000301935 | ENST00000532565 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + | 0.04095563 | 0.9590444 |
ENST00000301935 | ENST00000525449 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + | 0.028713435 | 0.9712866 |
ENST00000529640 | ENST00000346672 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + | 0.030307977 | 0.96969205 |
ENST00000529640 | ENST00000360962 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + | 0.031001288 | 0.9689987 |
ENST00000529640 | ENST00000527634 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + | 0.04120856 | 0.95879143 |
ENST00000529640 | ENST00000540737 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + | 0.038302626 | 0.96169734 |
ENST00000529640 | ENST00000532565 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + | 0.04120856 | 0.95879143 |
ENST00000529640 | ENST00000525449 | UBXN1 | chr11 | 62444285 | - | C11orf80 | chr11 | 66583524 | + | 0.030553054 | 0.96944696 |
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Fusion Genomic Features for UBXN1-C11orf80 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
UBXN1 | chr11 | 62444989 | - | C11orf80 | chr11 | 66583523 | + | 0.000314385 | 0.99968565 |
UBXN1 | chr11 | 62444284 | - | C11orf80 | chr11 | 66583523 | + | 3.22E-05 | 0.9999678 |
UBXN1 | chr11 | 62444989 | - | C11orf80 | chr11 | 66583523 | + | 0.000314385 | 0.99968565 |
UBXN1 | chr11 | 62444284 | - | C11orf80 | chr11 | 66583523 | + | 3.22E-05 | 0.9999678 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for UBXN1-C11orf80 |
Go to FGviewer for the breakpoints of chr11:62444285-chr11:66583524 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | UBXN1 | chr11:62444285 | chr11:66583524 | ENST00000301935 | - | 8 | 9 | 87_172 | 281.3333333333333 | 298.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | UBXN1 | chr11:62444285 | chr11:66583524 | ENST00000301935 | - | 8 | 9 | 2_42 | 281.3333333333333 | 298.0 | Domain | UBA |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | UBXN1 | chr11:62444285 | chr11:66583524 | ENST00000294119 | - | 1 | 8 | 87_172 | 0 | 313.0 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | UBXN1 | chr11:62444285 | chr11:66583524 | ENST00000294119 | - | 1 | 8 | 211_293 | 0 | 313.0 | Domain | UBX |
Hgene | UBXN1 | chr11:62444285 | chr11:66583524 | ENST00000294119 | - | 1 | 8 | 2_42 | 0 | 313.0 | Domain | UBA |
Hgene | UBXN1 | chr11:62444285 | chr11:66583524 | ENST00000301935 | - | 8 | 9 | 211_293 | 281.3333333333333 | 298.0 | Domain | UBX |
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Fusion Gene Sequence for UBXN1-C11orf80 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000301935_ENST00000346672_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(transcript)=1839nt_BP=1011nt CGCTTCCCCTCGGCTTTCTTCTCGTCGGTGTTCCCGGCTGCTATAGAGCCGGGTGAGAGAGCGAGCGCCCGTCGGCGGGTGTCGAGGGCG GGTTGCCTCGCGCTGACCCTTCCCGCCCTCCTTCTCGTCACACACCAGGTCCCCGCGGAAGCCGCGGTGTCGGCGCCATGGCGGAGCTGA CGGCTCTTGAGAGTCTCATCGAGATGGGCTTCCCCAGGGGACGCGCGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTG CGATGGACTGGCTGATGGAGCACGAAGACGACCCCGATGTGGACGAGCCTTTAGAGACTCCCCTTGGACATATCCTGGGACGGGAGCCCA CTTCCTCAGAGCAAGGCGGCCTTGAAGGATCTGGTTCTGCTGCCGGAGAAGGCAAACCCGCTTTGAGTGAAGAGGAAAGACAGGAACAAA CTAAGAGGATGTTGGAGCTGGTGGCCCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATTGGAACGGGAACGGCAGCGCA GGAGACAAGGGCAAGAGTTGTCAGCAGCACGACAGCGGCTACAGGAAGATGAGATGCGCCGGGCTGCTGAGGAGAGGCGGAGGGAAAAGG CCGAGGAGTTAGCAGCCAGACAAAGAGTTAGAGAAAAGATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGCAGTGTGGGCT CTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTC GCATACAGGTCAGGCTGCCAGATGGGACCTCACTGACCCAGACGTTCCGGGCCCGGGAACAGCTGGCAGCTGTGAGGCTCTATGTGGAGC TCCACCGTGGGGAGGAACTAGGTGGGGGCCAGGACCCTGTGCAATTGCTCAGTGGCTTCCCCAGACGGGCCTTCTCAGAAGCTGACATGG AGCGGCCTCTGCAGGAGCTGGATTTGGTGCTTCCAGATGTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATC CTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGATTTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTT TGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAGCCACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGC AACATCACCAGGCTGCCAAGGCAGCTGACACACAAGAGTTCAGGACCAAACTGCACAAAGTATTTCGTGAGATCACCCAACACCAATTTC TTCACCACTGCTCATGTGAGGTGAAGCAGCAGCTAACCCTAGAAAAAAAGGACTCAGCCCAGGGCACTGAGGACGCACCTGATAACAGCA GCCTGGAGCTCCTAGCAGATACCAGCGGGCAAGCAGAAAACAAGAGGCTCAAGAGGGGCAGCCCCCGCATAGAGGAGATGCGAGCTCTGC GCTCTGCCAGGGCCCCGAGCCCGTCAGAGGCCGCCCCGCGCCGCCCGGAAGCCACCGCGGCCCCCCTCACTCCTAGAGGAAGGGAGCACC GCGAGGCTCACGGCAGGGCCCTGGCGCCGGGCAGGGCGAGCCTCGGAAGCCGCCTGGAGGACGTGCTGTGGCTGCAGGAGGTCTCCAACC TGTCAGAGTGGCTGAGTCCCAGCCCTGGGCCCTGAGCCGGGTCCCCTTCCGCAAGCGCCCACCGATCCGGAGGCTGCGGGCAGCCGTTAT >In-frame_ENST00000301935_ENST00000346672_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(amino acids)=550AA_start in transcript=92_stop in transcript=1744 MPRADPSRPPSRHTPGPRGSRGVGAMAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLGHILGREPT SSEQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELVAQKQREREEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKA EELAARQRVREKIERDKAERAKKYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVEL HRGEELGGGQDPVQLLSGFPRRAFSEADMERPLQELDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTL LTTHLNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAADTQEFRTKLHKVFREITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSS LELLADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLTPRGREHREAHGRALAPGRASLGSRLEDVLWLQEVSNL -------------------------------------------------------------- >In-frame_ENST00000301935_ENST00000360962_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(transcript)=2138nt_BP=1011nt CGCTTCCCCTCGGCTTTCTTCTCGTCGGTGTTCCCGGCTGCTATAGAGCCGGGTGAGAGAGCGAGCGCCCGTCGGCGGGTGTCGAGGGCG GGTTGCCTCGCGCTGACCCTTCCCGCCCTCCTTCTCGTCACACACCAGGTCCCCGCGGAAGCCGCGGTGTCGGCGCCATGGCGGAGCTGA CGGCTCTTGAGAGTCTCATCGAGATGGGCTTCCCCAGGGGACGCGCGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTG CGATGGACTGGCTGATGGAGCACGAAGACGACCCCGATGTGGACGAGCCTTTAGAGACTCCCCTTGGACATATCCTGGGACGGGAGCCCA CTTCCTCAGAGCAAGGCGGCCTTGAAGGATCTGGTTCTGCTGCCGGAGAAGGCAAACCCGCTTTGAGTGAAGAGGAAAGACAGGAACAAA CTAAGAGGATGTTGGAGCTGGTGGCCCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATTGGAACGGGAACGGCAGCGCA GGAGACAAGGGCAAGAGTTGTCAGCAGCACGACAGCGGCTACAGGAAGATGAGATGCGCCGGGCTGCTGAGGAGAGGCGGAGGGAAAAGG CCGAGGAGTTAGCAGCCAGACAAAGAGTTAGAGAAAAGATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGCAGTGTGGGCT CTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTC GCATACAGGTCAGGCTGCCAGATGGGACCTCACTGACCCAGACGTTCCGGGCCCGGGAACAGCTGGCAGCTGTGAGGCTCTATGTGGAGC TCCACCGTGGGGAGGAACTAGGTGGGGGCCAGGACCCTGTGCAATTGCTCAGTGGCTTCCCCAGACGGGCCTTCTCAGAAGCTGACATGG AGCGGCCTCTGCAGGAGCTGGATTTGGTGCTTCCAGATGTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATC CTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGATTTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTT TGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAGCCACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGC AACATCACCAGGCTGCCAAGGCTCAGCAGAAACTACAGGCCTCACTCTCAGTGGCTGTGAACTCCATCATGAGTATTCTGACTGGAAGCA CTAGGAGCAGCTTCCGAAAGATGTGTCTCCAGACCCTTCAAGCAGCTGACACACAAGAGTTCAGGACCAAACTGCACAAAGTATTTCGTG AGATCACCCAACACCAATTTCTTCACCACTGCTCATGTGAGGTGAAGCAGCAGCTAACCCTAGAAAAAAAGGACTCAGCCCAGGGCACTG AGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGCAGATACCAGCGGGCAAGCAGAAAACAAGAGGCTCAAGAGGGGCAGCCCCCGCA TAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCCGAGCCCGTCAGAGGCCGCCCCGCGCCGCCCGGAAGCCACCGCGGCCCCCCTCA CTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAGGGCCCTGGCGCCGGGCAGGGCGAGCCTCGGAAGCCGCCTGGAGGACGTGCTGT GGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAGTCCCAGCCCTGGGCCCTGAGCCGGGTCCCCTTCCGCAAGCGCCCACCGATCCG GAGGCTGCGGGCAGCCGTTATCCCGTGGTTTAATAAAGCTGCCGCGCGCTCACCAAGTCCTCTTCCGCGTCTGCTTCCGCGTCGGGCCCG GGCGGGGCGGGGCGGGGCGTGGAGCCGCGCCGCGGCCTGACGTCACCCACACCTCCCTGGGACTGCGTCACTGGTGCGCGCCGCGGGTCA >In-frame_ENST00000301935_ENST00000360962_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(amino acids)=587AA_start in transcript=92_stop in transcript=1855 MPRADPSRPPSRHTPGPRGSRGVGAMAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLGHILGREPT SSEQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELVAQKQREREEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKA EELAARQRVREKIERDKAERAKKYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVEL HRGEELGGGQDPVQLLSGFPRRAFSEADMERPLQELDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTL LTTHLNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAQQKLQASLSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVFRE ITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLT -------------------------------------------------------------- >In-frame_ENST00000301935_ENST00000527634_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(transcript)=1912nt_BP=1011nt CGCTTCCCCTCGGCTTTCTTCTCGTCGGTGTTCCCGGCTGCTATAGAGCCGGGTGAGAGAGCGAGCGCCCGTCGGCGGGTGTCGAGGGCG GGTTGCCTCGCGCTGACCCTTCCCGCCCTCCTTCTCGTCACACACCAGGTCCCCGCGGAAGCCGCGGTGTCGGCGCCATGGCGGAGCTGA CGGCTCTTGAGAGTCTCATCGAGATGGGCTTCCCCAGGGGACGCGCGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTG CGATGGACTGGCTGATGGAGCACGAAGACGACCCCGATGTGGACGAGCCTTTAGAGACTCCCCTTGGACATATCCTGGGACGGGAGCCCA CTTCCTCAGAGCAAGGCGGCCTTGAAGGATCTGGTTCTGCTGCCGGAGAAGGCAAACCCGCTTTGAGTGAAGAGGAAAGACAGGAACAAA CTAAGAGGATGTTGGAGCTGGTGGCCCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATTGGAACGGGAACGGCAGCGCA GGAGACAAGGGCAAGAGTTGTCAGCAGCACGACAGCGGCTACAGGAAGATGAGATGCGCCGGGCTGCTGAGGAGAGGCGGAGGGAAAAGG CCGAGGAGTTAGCAGCCAGACAAAGAGTTAGAGAAAAGATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGCAGTGTGGGCT CTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTC GCATACAGGTCAGGCTGCCAGATGGGACCTCACTGACCCAGACGTTCCGGGCCCGGGAACAGCTGGCAGCTGTGAGGCTCTATGTGGAGC TCCACCGTGGGGAGGAACTAGGTGGGGGCCAGGACCCTGTGCAATTGCTCAGTGGCTTCCCCAGACGGGCCTTCTCAGAAGCTGACATGG AGCGGCCTCTGCAGGAGCTGGATTTGGTGCTTCCAGATGTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATC CTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGATTTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTT TGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAGCCACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGC AACATCACCAGGCTGCCAAGGCTCAGCAGAAACTACAGGCCTCACTCTCAGTGGCTGTGAACTCCATCATGAGTATTCTGACTGGAAGCA CTAGGAGCAGCTTCCGAAAGATGTGTCTCCAGACCCTTCAAGCAGCTGACACACAAGAGTTCAGGACCAAACTGCACAAAGTATTTCGTG AGATCACCCAACACCAATTTCTTCACCACTGCTCATGTGAGGTGAAGCAGCAGCTAACCCTAGAAAAAAAGGACTCAGCCCAGGGCACTG AGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGCAGATACCAGCGGGCAAGCAGAAAACAAGAGGCTCAAGAGGGGCAGCCCCCGCA TAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCCGAGCCCGTCAGAGGCCGCCCCGCGCCGCCCGGAAGCCACCGCGGCCCCCCTCA CTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAGGGCCCTGGCGCCGGGCAGGGCGAGCCTCGGAAGCCGCCTGGAGGACGTGCTGT GGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAGTCCCAGCCCTGGGCCCTGAGCCGGGTCCCCTTCCGCAAGCGCCCACCGATCCG >In-frame_ENST00000301935_ENST00000527634_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(amino acids)=587AA_start in transcript=92_stop in transcript=1855 MPRADPSRPPSRHTPGPRGSRGVGAMAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLGHILGREPT SSEQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELVAQKQREREEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKA EELAARQRVREKIERDKAERAKKYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVEL HRGEELGGGQDPVQLLSGFPRRAFSEADMERPLQELDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTL LTTHLNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAQQKLQASLSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVFRE ITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLT -------------------------------------------------------------- >In-frame_ENST00000301935_ENST00000540737_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(transcript)=1941nt_BP=1011nt CGCTTCCCCTCGGCTTTCTTCTCGTCGGTGTTCCCGGCTGCTATAGAGCCGGGTGAGAGAGCGAGCGCCCGTCGGCGGGTGTCGAGGGCG GGTTGCCTCGCGCTGACCCTTCCCGCCCTCCTTCTCGTCACACACCAGGTCCCCGCGGAAGCCGCGGTGTCGGCGCCATGGCGGAGCTGA CGGCTCTTGAGAGTCTCATCGAGATGGGCTTCCCCAGGGGACGCGCGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTG CGATGGACTGGCTGATGGAGCACGAAGACGACCCCGATGTGGACGAGCCTTTAGAGACTCCCCTTGGACATATCCTGGGACGGGAGCCCA CTTCCTCAGAGCAAGGCGGCCTTGAAGGATCTGGTTCTGCTGCCGGAGAAGGCAAACCCGCTTTGAGTGAAGAGGAAAGACAGGAACAAA CTAAGAGGATGTTGGAGCTGGTGGCCCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATTGGAACGGGAACGGCAGCGCA GGAGACAAGGGCAAGAGTTGTCAGCAGCACGACAGCGGCTACAGGAAGATGAGATGCGCCGGGCTGCTGAGGAGAGGCGGAGGGAAAAGG CCGAGGAGTTAGCAGCCAGACAAAGAGTTAGAGAAAAGATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGCAGTGTGGGCT CTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTC GCATACAGGTCAGGCTGCCAGATGGGACCTCACTGACCCAGACGTTCCGGGCCCGGGAACAGCTGGCAGCTGTGAGGCTCTATGTGGAGC TCCACCGTGGGGAGGAACTAGGTGGGGGCCAGGACCCTGTGCAATTGCTCAGTGGCTTCCCCAGACGGGCCTTCTCAGAAGCTGACATGG AGCGGCCTCTGCAGGAGCTGGATTTGGTGCTTCCAGATGTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATC CTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGATTTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTT TGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAGCCACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGC AACATCACCAGGCTGCCAAGGCTCAGCAGAAACTACAGGCCTCACTCTCAGTGGCTGTGAACTCCATCATGAGTATTCTGACTGGAAGCA CTAGGAGCAGCTTCCGAAAGATGTGTCTCCAGACCCTTCAAGCAGCTGACACACAAGAGTTCAGGACCAAACTGCACAAAGTATTTCGTG AGATCACCCAACACCAATTTCTTCACCACTGCTCATGTGAGGTGAAGCAGCTAACCCTAGAAAAAAAGGACTCAGCCCAGGGCACTGAGG ACGCACCTGATAACAGCAGCCTGGAGCTCCTAGCAGATACCAGCGGGCAAGCAGAAAACAAGAGGCTCAAGAGGGGCAGCCCCCGCATAG AGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCCGAGCCCGTCAGAGGCCGCCCCGCGCCGCCCGGAAGCCACCGCGGCCCCCCTCACTC CTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAGGGCCCTGGCGCCGGGCAGGGCGAGCCTCGGAAGCCGCCTGGAGGACGTGCTGTGGC TGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAGTCCCAGCCCTGGGCCCTGAGCCGGGTCCCCTTCCGCAAGCGCCCACCGATCCGGAG >In-frame_ENST00000301935_ENST00000540737_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(amino acids)=586AA_start in transcript=92_stop in transcript=1852 MPRADPSRPPSRHTPGPRGSRGVGAMAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLGHILGREPT SSEQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELVAQKQREREEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKA EELAARQRVREKIERDKAERAKKYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVEL HRGEELGGGQDPVQLLSGFPRRAFSEADMERPLQELDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTL LTTHLNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAQQKLQASLSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVFRE ITQHQFLHHCSCEVKQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLTP -------------------------------------------------------------- >In-frame_ENST00000301935_ENST00000532565_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(transcript)=1912nt_BP=1011nt CGCTTCCCCTCGGCTTTCTTCTCGTCGGTGTTCCCGGCTGCTATAGAGCCGGGTGAGAGAGCGAGCGCCCGTCGGCGGGTGTCGAGGGCG GGTTGCCTCGCGCTGACCCTTCCCGCCCTCCTTCTCGTCACACACCAGGTCCCCGCGGAAGCCGCGGTGTCGGCGCCATGGCGGAGCTGA CGGCTCTTGAGAGTCTCATCGAGATGGGCTTCCCCAGGGGACGCGCGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTG CGATGGACTGGCTGATGGAGCACGAAGACGACCCCGATGTGGACGAGCCTTTAGAGACTCCCCTTGGACATATCCTGGGACGGGAGCCCA CTTCCTCAGAGCAAGGCGGCCTTGAAGGATCTGGTTCTGCTGCCGGAGAAGGCAAACCCGCTTTGAGTGAAGAGGAAAGACAGGAACAAA CTAAGAGGATGTTGGAGCTGGTGGCCCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATTGGAACGGGAACGGCAGCGCA GGAGACAAGGGCAAGAGTTGTCAGCAGCACGACAGCGGCTACAGGAAGATGAGATGCGCCGGGCTGCTGAGGAGAGGCGGAGGGAAAAGG CCGAGGAGTTAGCAGCCAGACAAAGAGTTAGAGAAAAGATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGCAGTGTGGGCT CTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTC GCATACAGGTCAGGCTGCCAGATGGGACCTCACTGACCCAGACGTTCCGGGCCCGGGAACAGCTGGCAGCTGTGAGGCTCTATGTGGAGC TCCACCGTGGGGAGGAACTAGGTGGGGGCCAGGACCCTGTGCAATTGCTCAGTGGCTTCCCCAGACGGGCCTTCTCAGAAGCTGACATGG AGCGGCCTCTGCAGGAGCTGGATTTGGTGCTTCCAGATGTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATC CTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGATTTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTT TGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAGCCACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGC AACATCACCAGGCTGCCAAGGCTCAGCAGAAACTACAGGCCTCACTCTCAGTGGCTGTGAACTCCATCATGAGTATTCTGACTGGAAGCA CTAGGAGCAGCTTCCGAAAGATGTGTCTCCAGACCCTTCAAGCAGCTGACACACAAGAGTTCAGGACCAAACTGCACAAAGTATTTCGTG AGATCACCCAACACCAATTTCTTCACCACTGCTCATGTGAGGTGAAGCAGCAGCTAACCCTAGAAAAAAAGGACTCAGCCCAGGGCACTG AGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGCAGATACCAGCGGGCAAGCAGAAAACAAGAGGCTCAAGAGGGGCAGCCCCCGCA TAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCCGAGCCCGTCAGAGGCCGCCCCGCGCCGCCCGGAAGCCACCGCGGCCCCCCTCA CTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAGGGCCCTGGCGCCGGGCAGGGCGAGCCTCGGAAGCCGCCTGGAGGACGTGCTGT GGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAGTCCCAGCCCTGGGCCCTGAGCCGGGTCCCCTTCCGCAAGCGCCCACCGATCCG >In-frame_ENST00000301935_ENST00000532565_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(amino acids)=587AA_start in transcript=92_stop in transcript=1855 MPRADPSRPPSRHTPGPRGSRGVGAMAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLGHILGREPT SSEQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELVAQKQREREEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKA EELAARQRVREKIERDKAERAKKYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVEL HRGEELGGGQDPVQLLSGFPRRAFSEADMERPLQELDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTL LTTHLNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAQQKLQASLSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVFRE ITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLT -------------------------------------------------------------- >In-frame_ENST00000301935_ENST00000525449_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(transcript)=1835nt_BP=1011nt CGCTTCCCCTCGGCTTTCTTCTCGTCGGTGTTCCCGGCTGCTATAGAGCCGGGTGAGAGAGCGAGCGCCCGTCGGCGGGTGTCGAGGGCG GGTTGCCTCGCGCTGACCCTTCCCGCCCTCCTTCTCGTCACACACCAGGTCCCCGCGGAAGCCGCGGTGTCGGCGCCATGGCGGAGCTGA CGGCTCTTGAGAGTCTCATCGAGATGGGCTTCCCCAGGGGACGCGCGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTG CGATGGACTGGCTGATGGAGCACGAAGACGACCCCGATGTGGACGAGCCTTTAGAGACTCCCCTTGGACATATCCTGGGACGGGAGCCCA CTTCCTCAGAGCAAGGCGGCCTTGAAGGATCTGGTTCTGCTGCCGGAGAAGGCAAACCCGCTTTGAGTGAAGAGGAAAGACAGGAACAAA CTAAGAGGATGTTGGAGCTGGTGGCCCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATTGGAACGGGAACGGCAGCGCA GGAGACAAGGGCAAGAGTTGTCAGCAGCACGACAGCGGCTACAGGAAGATGAGATGCGCCGGGCTGCTGAGGAGAGGCGGAGGGAAAAGG CCGAGGAGTTAGCAGCCAGACAAAGAGTTAGAGAAAAGATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGCAGTGTGGGCT CTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGTTCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTC GCATACAGGTCAGGCTGCCAGATGGGACCTCACTGACCCAGACGTTCCGGGCCCGGGAACAGCTGGCAGCTGTGAGGCTCTATGTGGAGC TCCACCGTGGGGAGGAACTAGGTGGGGGCCAGGACCCTGTGCAATTGCTCAGTGGCTTCCCCAGACGGGCCTTCTCAGAAGCTGACATGG AGCGGCCTCTGCAGGAGCTGGATTTGGTGCTTCCAGATGTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATC CTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGATTTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTT TGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAGCCACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGC AACATCACCAGGCTGCCAAGGCAGCTGACACACAAGAGTTCAGGACCAAACTGCACAAAGTATTTCGTGAGATCACCCAACACCAATTTC TTCACCACTGCTCATGTGAGGTGAAGCAGCAGCTAACCCTAGAAAAAAAGGACTCAGCCCAGGGCACTGAGGACGCACCTGATAACAGCA GCCTGGAGCTCCTAGCAGATACCAGCGGGCAAGCAGAAAACAAGAGGCTCAAGAGGGGCAGCCCCCGCATAGAGGAGATGCGAGCTCTGC GCTCTGCCAGGGCCCCGAGCCCGTCAGAGGCCGCCCCGCGCCGCCCGGAAGCCACCGCGGCCCCCCTCACTCCTAGAGGAAGGGAGCACC GCGAGGCTCACGGCAGGGCCCTGGCGCCGGGCAGGGCGAGCCTCGGAAGCCGCCTGGAGGACGTGCTGTGGCTGCAGGAGGTCTCCAACC TGTCAGAGTGGCTGAGTCCCAGCCCTGGGCCCTGAGCCGGGTCCCCTTCCGCAAGCGCCCACCGATCCGGAGGCTGCGGGCAGCCGTTAT >In-frame_ENST00000301935_ENST00000525449_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(amino acids)=550AA_start in transcript=92_stop in transcript=1744 MPRADPSRPPSRHTPGPRGSRGVGAMAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLGHILGREPT SSEQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELVAQKQREREEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKA EELAARQRVREKIERDKAERAKKYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVEL HRGEELGGGQDPVQLLSGFPRRAFSEADMERPLQELDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTL LTTHLNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAADTQEFRTKLHKVFREITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSS LELLADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLTPRGREHREAHGRALAPGRASLGSRLEDVLWLQEVSNL -------------------------------------------------------------- >In-frame_ENST00000529640_ENST00000346672_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(transcript)=1802nt_BP=974nt CGGTGTTCCCGGCTGCTATAGAGCCGGGTGAGAGAGCGAGCGCCCGTCGGCGGGTGTCGAGGGCGGGTTGCCTCGCGCTGACCCTTCCCG CCCTCCTTCTCGTCACACACCAGGTCCCCGCGGAAGCCGCGGTGTCGGCGCCATGGCGGAGCTGACGGCTCTTGAGAGTCTCATCGAGAT GGGCTTCCCCAGGGGACGCGCGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTGCGATGGACTGGCTGATGGAGCACGA AGACGACCCCGATGTGGACGAGCCTTTAGAGACTCCCCTTGGACATATCCTGGGACGGGAGCCCACTTCCTCAGAGCAAGGCGGCCTTGA AGGATCTGGTTCTGCTGCCGGAGAAGGCAAACCCGCTTTGAGTGAAGAGGAAAGACAGGAACAAACTAAGAGGATGTTGGAGCTGGTGGC CCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATTGGAACGGGAACGGCAGCGCAGGAGACAAGGGCAAGAGTTGTCAGC AGCACGACAGCGGCTACAGGAAGATGAGATGCGCCGGGCTGCTGAGGAGAGGCGGAGGGAAAAGGCCGAGGAACAAAGAGTTAGAGAAAA GATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGT TCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTCGCATACAGGTCAGGCTGCCAGATGGGACCTCACTGAC CCAGACGTTCCGGGCCCGGGAACAGCTGGCAGCTGTGAGGCTCTATGTGGAGCTCCACCGTGGGGAGGAACTAGGTGGGGGCCAGGACCC TGTGCAATTGCTCAGTGGCTTCCCCAGACGGGCCTTCTCAGAAGCTGACATGGAGCGGCCTCTGCAGGAGCTGGATTTGGTGCTTCCAGA TGTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATCCTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGA TTTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTTTGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAG CCACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGCAACATCACCAGGCTGCCAAGGCAGCTGACACACAAGA GTTCAGGACCAAACTGCACAAAGTATTTCGTGAGATCACCCAACACCAATTTCTTCACCACTGCTCATGTGAGGTGAAGCAGCAGCTAAC CCTAGAAAAAAAGGACTCAGCCCAGGGCACTGAGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGCAGATACCAGCGGGCAAGCAGA AAACAAGAGGCTCAAGAGGGGCAGCCCCCGCATAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCCGAGCCCGTCAGAGGCCGCCCC GCGCCGCCCGGAAGCCACCGCGGCCCCCCTCACTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAGGGCCCTGGCGCCGGGCAGGGC GAGCCTCGGAAGCCGCCTGGAGGACGTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAGTCCCAGCCCTGGGCCCTGAGC CGGGTCCCCTTCCGCAAGCGCCCACCGATCCGGAGGCTGCGGGCAGCCGTTATCCCGTGGTTTAATAAAGCTGCCGCGCGCTCACCAAGT >In-frame_ENST00000529640_ENST00000346672_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(amino acids)=546AA_start in transcript=67_stop in transcript=1707 MPRADPSRPPSRHTPGPRGSRGVGAMAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLGHILGREPT SSEQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELVAQKQREREEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKA EEQRVREKIERDKAERAKKYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVELHRGE ELGGGQDPVQLLSGFPRRAFSEADMERPLQELDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTH LNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAADTQEFRTKLHKVFREITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELL ADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLTPRGREHREAHGRALAPGRASLGSRLEDVLWLQEVSNLSEWL -------------------------------------------------------------- >In-frame_ENST00000529640_ENST00000360962_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(transcript)=2101nt_BP=974nt CGGTGTTCCCGGCTGCTATAGAGCCGGGTGAGAGAGCGAGCGCCCGTCGGCGGGTGTCGAGGGCGGGTTGCCTCGCGCTGACCCTTCCCG CCCTCCTTCTCGTCACACACCAGGTCCCCGCGGAAGCCGCGGTGTCGGCGCCATGGCGGAGCTGACGGCTCTTGAGAGTCTCATCGAGAT GGGCTTCCCCAGGGGACGCGCGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTGCGATGGACTGGCTGATGGAGCACGA AGACGACCCCGATGTGGACGAGCCTTTAGAGACTCCCCTTGGACATATCCTGGGACGGGAGCCCACTTCCTCAGAGCAAGGCGGCCTTGA AGGATCTGGTTCTGCTGCCGGAGAAGGCAAACCCGCTTTGAGTGAAGAGGAAAGACAGGAACAAACTAAGAGGATGTTGGAGCTGGTGGC CCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATTGGAACGGGAACGGCAGCGCAGGAGACAAGGGCAAGAGTTGTCAGC AGCACGACAGCGGCTACAGGAAGATGAGATGCGCCGGGCTGCTGAGGAGAGGCGGAGGGAAAAGGCCGAGGAACAAAGAGTTAGAGAAAA GATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGT TCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTCGCATACAGGTCAGGCTGCCAGATGGGACCTCACTGAC CCAGACGTTCCGGGCCCGGGAACAGCTGGCAGCTGTGAGGCTCTATGTGGAGCTCCACCGTGGGGAGGAACTAGGTGGGGGCCAGGACCC TGTGCAATTGCTCAGTGGCTTCCCCAGACGGGCCTTCTCAGAAGCTGACATGGAGCGGCCTCTGCAGGAGCTGGATTTGGTGCTTCCAGA TGTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATCCTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGA TTTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTTTGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAG CCACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGCAACATCACCAGGCTGCCAAGGCTCAGCAGAAACTACA GGCCTCACTCTCAGTGGCTGTGAACTCCATCATGAGTATTCTGACTGGAAGCACTAGGAGCAGCTTCCGAAAGATGTGTCTCCAGACCCT TCAAGCAGCTGACACACAAGAGTTCAGGACCAAACTGCACAAAGTATTTCGTGAGATCACCCAACACCAATTTCTTCACCACTGCTCATG TGAGGTGAAGCAGCAGCTAACCCTAGAAAAAAAGGACTCAGCCCAGGGCACTGAGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGC AGATACCAGCGGGCAAGCAGAAAACAAGAGGCTCAAGAGGGGCAGCCCCCGCATAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCC GAGCCCGTCAGAGGCCGCCCCGCGCCGCCCGGAAGCCACCGCGGCCCCCCTCACTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAG GGCCCTGGCGCCGGGCAGGGCGAGCCTCGGAAGCCGCCTGGAGGACGTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAG TCCCAGCCCTGGGCCCTGAGCCGGGTCCCCTTCCGCAAGCGCCCACCGATCCGGAGGCTGCGGGCAGCCGTTATCCCGTGGTTTAATAAA GCTGCCGCGCGCTCACCAAGTCCTCTTCCGCGTCTGCTTCCGCGTCGGGCCCGGGCGGGGCGGGGCGGGGCGTGGAGCCGCGCCGCGGCC TGACGTCACCCACACCTCCCTGGGACTGCGTCACTGGTGCGCGCCGCGGGTCAGGGCGCAATGGCGGCGCTGGGCGGGGATGGGCTGCGA >In-frame_ENST00000529640_ENST00000360962_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(amino acids)=583AA_start in transcript=67_stop in transcript=1818 MPRADPSRPPSRHTPGPRGSRGVGAMAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLGHILGREPT SSEQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELVAQKQREREEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKA EEQRVREKIERDKAERAKKYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVELHRGE ELGGGQDPVQLLSGFPRRAFSEADMERPLQELDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTH LNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAQQKLQASLSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVFREITQH QFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLTPRGR -------------------------------------------------------------- >In-frame_ENST00000529640_ENST00000527634_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(transcript)=1875nt_BP=974nt CGGTGTTCCCGGCTGCTATAGAGCCGGGTGAGAGAGCGAGCGCCCGTCGGCGGGTGTCGAGGGCGGGTTGCCTCGCGCTGACCCTTCCCG CCCTCCTTCTCGTCACACACCAGGTCCCCGCGGAAGCCGCGGTGTCGGCGCCATGGCGGAGCTGACGGCTCTTGAGAGTCTCATCGAGAT GGGCTTCCCCAGGGGACGCGCGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTGCGATGGACTGGCTGATGGAGCACGA AGACGACCCCGATGTGGACGAGCCTTTAGAGACTCCCCTTGGACATATCCTGGGACGGGAGCCCACTTCCTCAGAGCAAGGCGGCCTTGA AGGATCTGGTTCTGCTGCCGGAGAAGGCAAACCCGCTTTGAGTGAAGAGGAAAGACAGGAACAAACTAAGAGGATGTTGGAGCTGGTGGC CCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATTGGAACGGGAACGGCAGCGCAGGAGACAAGGGCAAGAGTTGTCAGC AGCACGACAGCGGCTACAGGAAGATGAGATGCGCCGGGCTGCTGAGGAGAGGCGGAGGGAAAAGGCCGAGGAACAAAGAGTTAGAGAAAA GATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGT TCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTCGCATACAGGTCAGGCTGCCAGATGGGACCTCACTGAC CCAGACGTTCCGGGCCCGGGAACAGCTGGCAGCTGTGAGGCTCTATGTGGAGCTCCACCGTGGGGAGGAACTAGGTGGGGGCCAGGACCC TGTGCAATTGCTCAGTGGCTTCCCCAGACGGGCCTTCTCAGAAGCTGACATGGAGCGGCCTCTGCAGGAGCTGGATTTGGTGCTTCCAGA TGTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATCCTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGA TTTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTTTGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAG CCACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGCAACATCACCAGGCTGCCAAGGCTCAGCAGAAACTACA GGCCTCACTCTCAGTGGCTGTGAACTCCATCATGAGTATTCTGACTGGAAGCACTAGGAGCAGCTTCCGAAAGATGTGTCTCCAGACCCT TCAAGCAGCTGACACACAAGAGTTCAGGACCAAACTGCACAAAGTATTTCGTGAGATCACCCAACACCAATTTCTTCACCACTGCTCATG TGAGGTGAAGCAGCAGCTAACCCTAGAAAAAAAGGACTCAGCCCAGGGCACTGAGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGC AGATACCAGCGGGCAAGCAGAAAACAAGAGGCTCAAGAGGGGCAGCCCCCGCATAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCC GAGCCCGTCAGAGGCCGCCCCGCGCCGCCCGGAAGCCACCGCGGCCCCCCTCACTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAG GGCCCTGGCGCCGGGCAGGGCGAGCCTCGGAAGCCGCCTGGAGGACGTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAG >In-frame_ENST00000529640_ENST00000527634_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(amino acids)=583AA_start in transcript=67_stop in transcript=1818 MPRADPSRPPSRHTPGPRGSRGVGAMAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLGHILGREPT SSEQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELVAQKQREREEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKA EEQRVREKIERDKAERAKKYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVELHRGE ELGGGQDPVQLLSGFPRRAFSEADMERPLQELDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTH LNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAQQKLQASLSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVFREITQH QFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLTPRGR -------------------------------------------------------------- >In-frame_ENST00000529640_ENST00000540737_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(transcript)=1904nt_BP=974nt CGGTGTTCCCGGCTGCTATAGAGCCGGGTGAGAGAGCGAGCGCCCGTCGGCGGGTGTCGAGGGCGGGTTGCCTCGCGCTGACCCTTCCCG CCCTCCTTCTCGTCACACACCAGGTCCCCGCGGAAGCCGCGGTGTCGGCGCCATGGCGGAGCTGACGGCTCTTGAGAGTCTCATCGAGAT GGGCTTCCCCAGGGGACGCGCGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTGCGATGGACTGGCTGATGGAGCACGA AGACGACCCCGATGTGGACGAGCCTTTAGAGACTCCCCTTGGACATATCCTGGGACGGGAGCCCACTTCCTCAGAGCAAGGCGGCCTTGA AGGATCTGGTTCTGCTGCCGGAGAAGGCAAACCCGCTTTGAGTGAAGAGGAAAGACAGGAACAAACTAAGAGGATGTTGGAGCTGGTGGC CCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATTGGAACGGGAACGGCAGCGCAGGAGACAAGGGCAAGAGTTGTCAGC AGCACGACAGCGGCTACAGGAAGATGAGATGCGCCGGGCTGCTGAGGAGAGGCGGAGGGAAAAGGCCGAGGAACAAAGAGTTAGAGAAAA GATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGT TCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTCGCATACAGGTCAGGCTGCCAGATGGGACCTCACTGAC CCAGACGTTCCGGGCCCGGGAACAGCTGGCAGCTGTGAGGCTCTATGTGGAGCTCCACCGTGGGGAGGAACTAGGTGGGGGCCAGGACCC TGTGCAATTGCTCAGTGGCTTCCCCAGACGGGCCTTCTCAGAAGCTGACATGGAGCGGCCTCTGCAGGAGCTGGATTTGGTGCTTCCAGA TGTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATCCTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGA TTTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTTTGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAG CCACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGCAACATCACCAGGCTGCCAAGGCTCAGCAGAAACTACA GGCCTCACTCTCAGTGGCTGTGAACTCCATCATGAGTATTCTGACTGGAAGCACTAGGAGCAGCTTCCGAAAGATGTGTCTCCAGACCCT TCAAGCAGCTGACACACAAGAGTTCAGGACCAAACTGCACAAAGTATTTCGTGAGATCACCCAACACCAATTTCTTCACCACTGCTCATG TGAGGTGAAGCAGCTAACCCTAGAAAAAAAGGACTCAGCCCAGGGCACTGAGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGCAGA TACCAGCGGGCAAGCAGAAAACAAGAGGCTCAAGAGGGGCAGCCCCCGCATAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCCGAG CCCGTCAGAGGCCGCCCCGCGCCGCCCGGAAGCCACCGCGGCCCCCCTCACTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAGGGC CCTGGCGCCGGGCAGGGCGAGCCTCGGAAGCCGCCTGGAGGACGTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAGTCC CAGCCCTGGGCCCTGAGCCGGGTCCCCTTCCGCAAGCGCCCACCGATCCGGAGGCTGCGGGCAGCCGTTATCCCGTGGTTTAATAAAGCT >In-frame_ENST00000529640_ENST00000540737_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(amino acids)=582AA_start in transcript=67_stop in transcript=1815 MPRADPSRPPSRHTPGPRGSRGVGAMAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLGHILGREPT SSEQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELVAQKQREREEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKA EEQRVREKIERDKAERAKKYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVELHRGE ELGGGQDPVQLLSGFPRRAFSEADMERPLQELDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTH LNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAQQKLQASLSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVFREITQH QFLHHCSCEVKQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLTPRGRE -------------------------------------------------------------- >In-frame_ENST00000529640_ENST00000532565_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(transcript)=1875nt_BP=974nt CGGTGTTCCCGGCTGCTATAGAGCCGGGTGAGAGAGCGAGCGCCCGTCGGCGGGTGTCGAGGGCGGGTTGCCTCGCGCTGACCCTTCCCG CCCTCCTTCTCGTCACACACCAGGTCCCCGCGGAAGCCGCGGTGTCGGCGCCATGGCGGAGCTGACGGCTCTTGAGAGTCTCATCGAGAT GGGCTTCCCCAGGGGACGCGCGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTGCGATGGACTGGCTGATGGAGCACGA AGACGACCCCGATGTGGACGAGCCTTTAGAGACTCCCCTTGGACATATCCTGGGACGGGAGCCCACTTCCTCAGAGCAAGGCGGCCTTGA AGGATCTGGTTCTGCTGCCGGAGAAGGCAAACCCGCTTTGAGTGAAGAGGAAAGACAGGAACAAACTAAGAGGATGTTGGAGCTGGTGGC CCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATTGGAACGGGAACGGCAGCGCAGGAGACAAGGGCAAGAGTTGTCAGC AGCACGACAGCGGCTACAGGAAGATGAGATGCGCCGGGCTGCTGAGGAGAGGCGGAGGGAAAAGGCCGAGGAACAAAGAGTTAGAGAAAA GATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGT TCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTCGCATACAGGTCAGGCTGCCAGATGGGACCTCACTGAC CCAGACGTTCCGGGCCCGGGAACAGCTGGCAGCTGTGAGGCTCTATGTGGAGCTCCACCGTGGGGAGGAACTAGGTGGGGGCCAGGACCC TGTGCAATTGCTCAGTGGCTTCCCCAGACGGGCCTTCTCAGAAGCTGACATGGAGCGGCCTCTGCAGGAGCTGGATTTGGTGCTTCCAGA TGTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATCCTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGA TTTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTTTGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAG CCACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGCAACATCACCAGGCTGCCAAGGCTCAGCAGAAACTACA GGCCTCACTCTCAGTGGCTGTGAACTCCATCATGAGTATTCTGACTGGAAGCACTAGGAGCAGCTTCCGAAAGATGTGTCTCCAGACCCT TCAAGCAGCTGACACACAAGAGTTCAGGACCAAACTGCACAAAGTATTTCGTGAGATCACCCAACACCAATTTCTTCACCACTGCTCATG TGAGGTGAAGCAGCAGCTAACCCTAGAAAAAAAGGACTCAGCCCAGGGCACTGAGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGC AGATACCAGCGGGCAAGCAGAAAACAAGAGGCTCAAGAGGGGCAGCCCCCGCATAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCC GAGCCCGTCAGAGGCCGCCCCGCGCCGCCCGGAAGCCACCGCGGCCCCCCTCACTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAG GGCCCTGGCGCCGGGCAGGGCGAGCCTCGGAAGCCGCCTGGAGGACGTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAG >In-frame_ENST00000529640_ENST00000532565_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(amino acids)=583AA_start in transcript=67_stop in transcript=1818 MPRADPSRPPSRHTPGPRGSRGVGAMAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLGHILGREPT SSEQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELVAQKQREREEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKA EEQRVREKIERDKAERAKKYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVELHRGE ELGGGQDPVQLLSGFPRRAFSEADMERPLQELDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTH LNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAQQKLQASLSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVFREITQH QFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLTPRGR -------------------------------------------------------------- >In-frame_ENST00000529640_ENST00000525449_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(transcript)=1798nt_BP=974nt CGGTGTTCCCGGCTGCTATAGAGCCGGGTGAGAGAGCGAGCGCCCGTCGGCGGGTGTCGAGGGCGGGTTGCCTCGCGCTGACCCTTCCCG CCCTCCTTCTCGTCACACACCAGGTCCCCGCGGAAGCCGCGGTGTCGGCGCCATGGCGGAGCTGACGGCTCTTGAGAGTCTCATCGAGAT GGGCTTCCCCAGGGGACGCGCGGAGAAGGCTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTGCGATGGACTGGCTGATGGAGCACGA AGACGACCCCGATGTGGACGAGCCTTTAGAGACTCCCCTTGGACATATCCTGGGACGGGAGCCCACTTCCTCAGAGCAAGGCGGCCTTGA AGGATCTGGTTCTGCTGCCGGAGAAGGCAAACCCGCTTTGAGTGAAGAGGAAAGACAGGAACAAACTAAGAGGATGTTGGAGCTGGTGGC CCAGAAGCAGCGGGAGCGTGAAGAAAGAGAGGAACGGGAGGCATTGGAACGGGAACGGCAGCGCAGGAGACAAGGGCAAGAGTTGTCAGC AGCACGACAGCGGCTACAGGAAGATGAGATGCGCCGGGCTGCTGAGGAGAGGCGGAGGGAAAAGGCCGAGGAACAAAGAGTTAGAGAAAA GATCGAGAGGGACAAAGCAGAGAGAGCCAAGAAGTATGGTGGCAGTGTGGGCTCTCAGCCACCCCCAGTGGCACCAGAGCCAGGTCCTGT TCCCTCTTCTCCCAGCCAGGAGCCTCCCACCAAGCGGGAGTATGACCAGTGTCGCATACAGGTCAGGCTGCCAGATGGGACCTCACTGAC CCAGACGTTCCGGGCCCGGGAACAGCTGGCAGCTGTGAGGCTCTATGTGGAGCTCCACCGTGGGGAGGAACTAGGTGGGGGCCAGGACCC TGTGCAATTGCTCAGTGGCTTCCCCAGACGGGCCTTCTCAGAAGCTGACATGGAGCGGCCTCTGCAGGAGCTGGATTTGGTGCTTCCAGA TGTGAGTTATCAGGTGGAATCCAGTGAGGAGGATCAGTCTCAGACTATGGATCCTCAAGGACAAACTCTGCTGCTTTTTCTCTTTGTGGA TTTCCACAGTGCATTTCCAGTCCAGCAAATGGAAATCTGGGGAGTCTATACTTTGCTCACAACTCATCTCAATGCCATCCTTGTGGAGAG CCACAGTGTAGTGCAAGGTTCCATCCAATTCACTGTGGACAAGGTCTTGGAGCAACATCACCAGGCTGCCAAGGCAGCTGACACACAAGA GTTCAGGACCAAACTGCACAAAGTATTTCGTGAGATCACCCAACACCAATTTCTTCACCACTGCTCATGTGAGGTGAAGCAGCAGCTAAC CCTAGAAAAAAAGGACTCAGCCCAGGGCACTGAGGACGCACCTGATAACAGCAGCCTGGAGCTCCTAGCAGATACCAGCGGGCAAGCAGA AAACAAGAGGCTCAAGAGGGGCAGCCCCCGCATAGAGGAGATGCGAGCTCTGCGCTCTGCCAGGGCCCCGAGCCCGTCAGAGGCCGCCCC GCGCCGCCCGGAAGCCACCGCGGCCCCCCTCACTCCTAGAGGAAGGGAGCACCGCGAGGCTCACGGCAGGGCCCTGGCGCCGGGCAGGGC GAGCCTCGGAAGCCGCCTGGAGGACGTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCTGAGTCCCAGCCCTGGGCCCTGAGC >In-frame_ENST00000529640_ENST00000525449_TCGA-GI-A2C8-01A_UBXN1_chr11_62444285_-_C11orf80_chr11_66583524_length(amino acids)=546AA_start in transcript=67_stop in transcript=1707 MPRADPSRPPSRHTPGPRGSRGVGAMAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDPDVDEPLETPLGHILGREPT SSEQGGLEGSGSAAGEGKPALSEEERQEQTKRMLELVAQKQREREEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKA EEQRVREKIERDKAERAKKYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVELHRGE ELGGGQDPVQLLSGFPRRAFSEADMERPLQELDLVLPDVSYQVESSEEDQSQTMDPQGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTH LNAILVESHSVVQGSIQFTVDKVLEQHHQAAKAADTQEFRTKLHKVFREITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELL ADTSGQAENKRLKRGSPRIEEMRALRSARAPSPSEAAPRRPEATAAPLTPRGREHREAHGRALAPGRASLGSRLEDVLWLQEVSNLSEWL -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for UBXN1-C11orf80 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | UBXN1 | chr11:62444285 | chr11:66583524 | ENST00000294119 | - | 1 | 8 | 43_297 | 0 | 313.0 | BRCA1 |
Hgene | UBXN1 | chr11:62444285 | chr11:66583524 | ENST00000301935 | - | 8 | 9 | 43_297 | 281.3333333333333 | 298.0 | BRCA1 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for UBXN1-C11orf80 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for UBXN1-C11orf80 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | UBXN1 | C0024623 | Malignant neoplasm of stomach | 1 | CTD_human |
Hgene | UBXN1 | C0038356 | Stomach Neoplasms | 1 | CTD_human |
Hgene | UBXN1 | C0235874 | Disease Exacerbation | 1 | CTD_human |
Hgene | UBXN1 | C1708349 | Hereditary Diffuse Gastric Cancer | 1 | CTD_human |
Tgene | C11orf80 | C0678213 | Complete hydatidiform mole | 1 | ORPHANET |