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Center for Computational Systems Medicine
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Fusion Gene Summary

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Fusion Gene ORF analysis

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Fusion Genomic Features

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Fusion Protein Features

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Fusion Gene Sequence

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Fusion Gene PPI analysis

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Related Drugs

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Related Diseases

Fusion gene:UTRN-MSRA (FusionGDB2 ID:97087)

Fusion Gene Summary for UTRN-MSRA

check button Fusion gene summary
Fusion gene informationFusion gene name: UTRN-MSRA
Fusion gene ID: 97087
HgeneTgene
Gene symbol

UTRN

MSRA

Gene ID

7402

4482

Gene nameutrophinmethionine sulfoxide reductase A
SynonymsDMDL|DRP|DRP1PMSR
Cytomap

6q24.2

8p23.1

Type of geneprotein-codingprotein-coding
DescriptionutrophinDRP-1dystrophin-related protein 1mitochondrial peptide methionine sulfoxide reductasecytosolic methionine-S-sulfoxide reductasepeptide Met(O) reductasepeptide met (O) reductasepeptide-methionine (S)-S-oxide reductase
Modification date2020031320200313
UniProtAcc.

Q9UJ68

Ensembl transtripts involved in fusion geneENST00000367545, ENST00000367526, 
ENST00000480333, 		ENST00000317173, 
ENST00000441698, ENST00000518255, 
ENST00000521209, ENST00000528246, 
ENST00000382490, ENST00000517594, 
Fusion gene scores* DoF score34 X 28 X 11=1047211 X 9 X 5=495
# samples 3712
** MAII scorelog2(37/10472*10)=-4.82286792142893
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(12/495*10)=-2.04439411935845
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: UTRN [Title/Abstract] AND MSRA [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointUTRN(144801118)-MSRA(10285658), # samples:1
Anticipated loss of major functional domain due to fusion event.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check buttonFusion gene breakpoints across UTRN (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check buttonFusion gene breakpoints across MSRA (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.

check button Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0)
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4PRADTCGA-CH-5746-01AUTRNchr6

144801118

+MSRAchr8

10285658

+


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Fusion Gene ORF analysis for UTRN-MSRA

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000367545ENST00000317173UTRNchr6

144801118

+MSRAchr8

10285658

+
Frame-shiftENST00000367545ENST00000441698UTRNchr6

144801118

+MSRAchr8

10285658

+
5CDS-intronENST00000367545ENST00000518255UTRNchr6

144801118

+MSRAchr8

10285658

+
5CDS-intronENST00000367545ENST00000521209UTRNchr6

144801118

+MSRAchr8

10285658

+
5CDS-intronENST00000367545ENST00000528246UTRNchr6

144801118

+MSRAchr8

10285658

+
5CDS-intronENST00000367545ENST00000382490UTRNchr6

144801118

+MSRAchr8

10285658

+
5CDS-intronENST00000367545ENST00000517594UTRNchr6

144801118

+MSRAchr8

10285658

+
intron-3CDSENST00000367526ENST00000317173UTRNchr6

144801118

+MSRAchr8

10285658

+
intron-3CDSENST00000367526ENST00000441698UTRNchr6

144801118

+MSRAchr8

10285658

+
intron-intronENST00000367526ENST00000518255UTRNchr6

144801118

+MSRAchr8

10285658

+
intron-intronENST00000367526ENST00000521209UTRNchr6

144801118

+MSRAchr8

10285658

+
intron-intronENST00000367526ENST00000528246UTRNchr6

144801118

+MSRAchr8

10285658

+
intron-intronENST00000367526ENST00000382490UTRNchr6

144801118

+MSRAchr8

10285658

+
intron-intronENST00000367526ENST00000517594UTRNchr6

144801118

+MSRAchr8

10285658

+
intron-3CDSENST00000480333ENST00000317173UTRNchr6

144801118

+MSRAchr8

10285658

+
intron-3CDSENST00000480333ENST00000441698UTRNchr6

144801118

+MSRAchr8

10285658

+
intron-intronENST00000480333ENST00000518255UTRNchr6

144801118

+MSRAchr8

10285658

+
intron-intronENST00000480333ENST00000521209UTRNchr6

144801118

+MSRAchr8

10285658

+
intron-intronENST00000480333ENST00000528246UTRNchr6

144801118

+MSRAchr8

10285658

+
intron-intronENST00000480333ENST00000382490UTRNchr6

144801118

+MSRAchr8

10285658

+
intron-intronENST00000480333ENST00000517594UTRNchr6

144801118

+MSRAchr8

10285658

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000367545UTRNchr6144801118+ENST00000317173MSRAchr810285658+42513507036711223

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000367545ENST00000317173UTRNchr6144801118+MSRAchr810285658+0.0010287390.9989712

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Fusion Genomic Features for UTRN-MSRA


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
UTRNchr6144801118+MSRAchr810285657+4.30E-060.9999957
UTRNchr6144801118+MSRAchr810285657+4.30E-060.9999957

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.

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Fusion Protein Features for UTRN-MSRA


check button Go to

FGviewer for the breakpoints of chr6:144801118-chr8:10285658

.
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
.MSRA

Q9UJ68

FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes.FUNCTION: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+2574150_2551169.03434.0DomainCalponin-homology (CH) 2
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+257431_1351169.03434.0DomainCalponin-homology (CH) 1
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25741_2461169.03434.0RegionNote=Actin-binding
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25741019_11211169.03434.0RepeatSpectrin 7
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+2574312_4161169.03434.0RepeatSpectrin 1
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+2574421_5251169.03434.0RepeatSpectrin 2
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+2574532_6361169.03434.0RepeatSpectrin 3
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+2574690_7951169.03434.0RepeatSpectrin 4
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+2574801_9011169.03434.0RepeatSpectrin 5
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+2574910_10121169.03434.0RepeatSpectrin 6

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25742812_28451169.03434.0DomainWW
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25741128_12291169.03434.0RepeatSpectrin 8
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25741236_13331169.03434.0RepeatSpectrin 9
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25741335_14361169.03434.0RepeatSpectrin 10
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25741438_15401169.03434.0RepeatSpectrin 11
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25741547_16481169.03434.0RepeatSpectrin 12
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25741653_17471169.03434.0RepeatSpectrin 13
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25741748_18481169.03434.0RepeatSpectrin 14
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25741849_19681169.03434.0RepeatSpectrin 15
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25741979_20801169.03434.0RepeatSpectrin 16
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25742087_21861169.03434.0RepeatSpectrin 17
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25742229_23321169.03434.0RepeatSpectrin 18
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25742349_24391169.03434.0RepeatSpectrin 19
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25742446_25551169.03434.0RepeatSpectrin 20
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25742562_26871169.03434.0RepeatSpectrin 21
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25742694_27961169.03434.0RepeatSpectrin 22
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25743064_31111169.03434.0Zinc fingerZZ-type


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Fusion Gene Sequence for UTRN-MSRA


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>In-frame_ENST00000367545_ENST00000317173_TCGA-CH-5746-01A_UTRN_chr6_144801118_+_MSRA_chr8_10285658_length(transcript)=4251nt_BP=3507nt
ATGGCCAAGTATGGAGAACATGAAGCCAGTCCTGACAATGGGCAGAACGAATTCAGTGATATCATTAAGTCCAGATCTGATGAACACAAT
GACGTACAGAAGAAAACCTTTACCAAATGGATAAATGCTCGATTTTCAAAGAGTGGGAAACCACCCATCAATGATATGTTCACAGACCTC
AAAGATGGAAGGAAGCTATTGGATCTTCTAGAAGGCCTCACAGGAACATCACTGCCAAAGGAACGTGGTTCCACAAGGGTACATGCCTTA
AATAACGTCAACAGAGTGCTGCAGGTTTTACATCAGAACAATGTGGAATTAGTGAATATAGGGGGAACTGACATTGTGGATGGAAATCAC
AAACTGACTTTGGGGTTACTTTGGAGCATCATTTTGCACTGGCAGGTGAAAGATGTCATGAAGGATGTCATGTCGGACCTGCAGCAGACG
AACAGTGAGAAGATCCTGCTCAGCTGGGTGCGTCAGACCACCAGGCCCTACAGCCAAGTCAACGTCCTCAACTTCACCACCAGCTGGACA
GATGGACTCGCCTTTAATGCTGTCCTCCACCGACATAAACCTGATCTCTTCAGCTGGGATAAAGTTGTCAAAATGTCACCAATTGAGAGA
CTTGAACATGCCTTCAGCAAGGCTCAAACTTATTTGGGAATTGAAAAGCTGTTAGATCCTGAAGATGTTGCCGTTCAGCTTCCTGACAAG
AAATCCATAATTATGTATTTAACATCTTTGTTTGAGGTGCTACCTCAGCAAGTCACCATAGACGCCATCCGTGAGGTAGAGACACTCCCA
AGGAAATATAAAAAAGAATGTGAAGAAGAGGCAATTAATATACAGAGTACAGCGCCTGAGGAGGAGCATGAGAGTCCCCGAGCTGAAACT
CCCAGCACTGTCACTGAGGTTGACATGGATCTGGACAGCTATCAGATTGCGTTGGAGGAAGTGCTGACCTGGTTGCTTTCTGCTGAGGAC
ACTTTCCAGGAGCAGGATGATATTTCTGATGATGTTGAAGAAGTCAAAGACCAGTTTGCAACCCATGAAGCTTTTATGATGGAACTGACT
GCACACCAGAGCAGTGTGGGCAGCGTCCTGCAGGCAGGCAACCAACTGATAACACAAGGAACTCTGTCAGACGAAGAAGAATTTGAGATT
CAGGAACAGATGACCCTGCTGAATGCTAGATGGGAGGCTCTTAGGGTGGAGAGTATGGACAGACAGTCCCGGCTGCACGATGTGCTGATG
GAACTGCAGAAGAAGCAACTGCAGCAGCTCTCCGCCTGGTTAACACTCACAGAGGAGCGCATTCAGAAGATGGAAACTTGCCCCCTGGAT
GATGATGTAAAATCTCTACAAAAGCTGCTAGAAGAACATAAAAGTTTGCAAAGTGATCTTGAGGCTGAACAGGTGAAAGTAAATTCACTA
ACTCACATGGTGGTCATTGTTGATGAAAACAGTGGTGAGAGTGCTACAGCTATCCTAGAAGACCAGTTACAGAAACTTGGTGAGCGCTGG
ACAGCAGTATGCCGTTGGACTGAAGAACGCTGGAATAGGTTACAAGAAATCAATATATTGTGGCAGGAATTATTGGAAGAACAGTGCTTG
TTGAAAGCTTGGTTAACCGAAAAAGAAGAGGCTTTAAATAAAGTCCAGACAAGCAACTTCAAAGACCAAAAGGAACTAAGTGTCAGTGTT
CGACGTCTGGCTATTTTGAAGGAAGACATGGAAATGAAGCGTCAAACATTGGATCAGCTGAGTGAGATTGGCCAGGATGTGGGACAATTA
CTTGATAATTCCAAGGCATCTAAGAAGATCAACAGTGACTCAGAGGAACTGACTCAAAGATGGGATTCTTTGGTTCAGAGACTAGAAGAT
TCCTCCAACCAGGTGACTCAGGCTGTAGCAAAGCTGGGGATGTCTCAGATTCCTCAGAAGGACCTTTTGGAGACTGTTCGTGTAAGAGAA
CAAGCAATTACAAAAAAATCTAAGCAGGAACTGCCTCCTCCTCCTCCCCCAAAGAAGAGACAGATCCATGTGGATATTGAAGCTAAGAAA
AAGTTTGATGCTATAAGTGCAGAGCTGTTGAACTGGATTTTGAAATGGAAAACTGCCATTCAGACCACAGAGATAAAAGAGTATATGAAG
ATGCAAGACACTTCCGAAATGAAAAAGAAGTTGAAGGCATTAGAAAAAGAACAGAGAGAAAGAATCCCCAGAGCAGATGAATTAAACCAA
ACTGGACAAATCCTTGTGGAGCAAATGGGAAAAGAAGGCCTTCCTACTGAAGAAATAAAAAATGTTCTGGAGAAGGTTTCATCAGAATGG
AAGAATGTATCTCAACATTTGGAAGATCTAGAAAGAAAGATTCAGCTACAGGAAGATATAAATGCTTATTTCAAGCAGCTTGATGAGCTT
GAAAAGGTCATCAAGACAAAGGAGGAGTGGGTAAAACACACTTCCATTTCTGAATCTTCCCGGCAGTCCTTGCCAAGCTTGAAGGATTCC
TGTCAGCGGGAATTGACAAATCTTCTTGGCCTTCACCCCAAAATTGAAATGGCTCGTGCAAGCTGCTCGGCCCTGATGTCTCAGCCTTCT
GCCCCAGATTTTGTCCAGCGGGGCTTCGATAGCTTTCTGGGCCGCTACCAAGCTGTACAAGAGGCTGTAGAGGATCGTCAACAACATCTA
GAGAATGAACTGAAGGGCCAACCTGGACATGCATATCTGGAAACATTGAAAACACTGAAAGATGTGCTAAATGATTCAGAAAATAAGGCC
CAGGTGTCTCTGAATGTCCTTAATGATCTTGCCAAGGTGGAGAAGGCCCTGCAAGAAAAAAAGACCCTTGATGAAATCCTTGAGAATCAG
AAACCTGCATTACATAAACTTGCAGAAGAAACAAAGGCTCTGGAGAAAAATGTTCATCCTGATGTAGAAAAATTATATAAGCAAGAATTT
GATGATGTGCAAGGAAAGTGGAACAAGCTAAAGGTCTTGGTTTCCAAAGATCTACATTTGCTTGAGGAAATTGCTCTCACACTCAGAGCT
TTTGAGGCCGATTCAACAGTCATTGAGAAGTGGATGGATGGCGTGAAAGACTTCTTAATGAAACAGCAGGCTGCCCAAGGAGACGACGCA
GGTCTACAGAGGCAGTTAGACCAGTGCTCTGCATTTGTTAATGAAATAGAAACAATTGAATCATCTCTGAAAAACATGAAGGAAATAGAG
ACTAATCTTCGAAGTGGTCCAGTTGCTGGAATAAAAACTTGGGTGCAGACAAGACTAGGTGACTACCAAACTCAACTGGAGAAACTTAGC
AAGGAGATCGCTACTCAAAAAAGTAGGTTGTCTGAAAGTCAAGAAAAAGCTGCGAACCTGAAGAAAGACTTGGCAGAGATGCAGGAATGG
ATGACCCAGGCCGAGGAAGAATATTTGGAGCGGGATTTTGAGTACAAGTCACCAGAAGAGCTTGAGAGTGCTGTGGAAGAGATGAAGGTT
CTTTCAGAGCACGGCTTCGGCCCCATCACTACCGACATCCGGGAGGGACAGACTTTCTACTATGCGGAAGACTACCACCAGCAGTACCTG
AGCAAGAACCCCAATGGCTACTGCGGCCTTGGGGGCACCGGCGTGTCCTGCCCAGTGGGTATTAAAAAATAATTTCTCCCCACATGGTGG
GCCTTTGAGGTTCCAGTAAAAATGCTTTCAACAAATTGGGCAATGCTTGTGTGATTCACAATCGTGGCATTTAAAGTGCACAAAGTACAA
AGGAATTTATACAGATTGGGTTTACCGAAGTATAATCTATAGGAGGCGCGATGGCAAGTTGATAAAATGTGACTTATCTCCTAATAAGTT
ATGGTGGGAGTGGAGCTGTGCAGTTTCCTGTGTCTTCTGGGGTCTGAGTGAAGATAGCAGGGATGCTGTGTTCACCCTTCTTGGTAGAAG
CTAAGGTGTGAGCTGGGAGGTTGCTGGACAGGATGGGGGACCCCAGAAGTCCTTTATCTGTGCTCTCTGCCCGCCAGTGCCTTACAATTT
GCAAACGTGTATAGCCTCAGTGACTCATTCGCTGAAATCCTTCGCTTTACCAAATCTAGACATACATAAGGGGCTTTCTCTCCCTTTTCA
GCCCTCTCTGTGCAGAGAAAAGATGTGAGTCCGCTTGATGAATTCTAATGCTTTGCTTAGAGCTATGAGAAATGTTTGTTTTAATAAAAA

>In-frame_ENST00000367545_ENST00000317173_TCGA-CH-5746-01A_UTRN_chr6_144801118_+_MSRA_chr8_10285658_length(amino acids)=1223AA_start in transcript=0_stop in transcript=3671
MAKYGEHEASPDNGQNEFSDIIKSRSDEHNDVQKKTFTKWINARFSKSGKPPINDMFTDLKDGRKLLDLLEGLTGTSLPKERGSTRVHAL
NNVNRVLQVLHQNNVELVNIGGTDIVDGNHKLTLGLLWSIILHWQVKDVMKDVMSDLQQTNSEKILLSWVRQTTRPYSQVNVLNFTTSWT
DGLAFNAVLHRHKPDLFSWDKVVKMSPIERLEHAFSKAQTYLGIEKLLDPEDVAVQLPDKKSIIMYLTSLFEVLPQQVTIDAIREVETLP
RKYKKECEEEAINIQSTAPEEEHESPRAETPSTVTEVDMDLDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEEVKDQFATHEAFMMELT
AHQSSVGSVLQAGNQLITQGTLSDEEEFEIQEQMTLLNARWEALRVESMDRQSRLHDVLMELQKKQLQQLSAWLTLTEERIQKMETCPLD
DDVKSLQKLLEEHKSLQSDLEAEQVKVNSLTHMVVIVDENSGESATAILEDQLQKLGERWTAVCRWTEERWNRLQEINILWQELLEEQCL
LKAWLTEKEEALNKVQTSNFKDQKELSVSVRRLAILKEDMEMKRQTLDQLSEIGQDVGQLLDNSKASKKINSDSEELTQRWDSLVQRLED
SSNQVTQAVAKLGMSQIPQKDLLETVRVREQAITKKSKQELPPPPPPKKRQIHVDIEAKKKFDAISAELLNWILKWKTAIQTTEIKEYMK
MQDTSEMKKKLKALEKEQRERIPRADELNQTGQILVEQMGKEGLPTEEIKNVLEKVSSEWKNVSQHLEDLERKIQLQEDINAYFKQLDEL
EKVIKTKEEWVKHTSISESSRQSLPSLKDSCQRELTNLLGLHPKIEMARASCSALMSQPSAPDFVQRGFDSFLGRYQAVQEAVEDRQQHL
ENELKGQPGHAYLETLKTLKDVLNDSENKAQVSLNVLNDLAKVEKALQEKKTLDEILENQKPALHKLAEETKALEKNVHPDVEKLYKQEF
DDVQGKWNKLKVLVSKDLHLLEEIALTLRAFEADSTVIEKWMDGVKDFLMKQQAAQGDDAGLQRQLDQCSAFVNEIETIESSLKNMKEIE
TNLRSGPVAGIKTWVQTRLGDYQTQLEKLSKEIATQKSRLSESQEKAANLKKDLAEMQEWMTQAEEEYLERDFEYKSPEELESAVEEMKV

--------------------------------------------------------------

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Fusion Gene PPI Analysis for UTRN-MSRA


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+2574268_9051169.03434.0SYNM


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25741336_17681169.03434.0SYNM
HgeneUTRNchr6:144801118chr8:10285658ENST00000367545+25742798_31651169.03434.0SYNM


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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Related Drugs for UTRN-MSRA


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for UTRN-MSRA


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgeneMSRAC0036341Schizophrenia2PSYGENET
TgeneMSRAC0013146Drug abuse1CTD_human
TgeneMSRAC0013170Drug habituation1CTD_human
TgeneMSRAC0013222Drug Use Disorders1CTD_human
TgeneMSRAC0029231Organic Mental Disorders, Substance-Induced1CTD_human
TgeneMSRAC0038580Substance Dependence1CTD_human
TgeneMSRAC0038586Substance Use Disorders1CTD_human
TgeneMSRAC0236969Substance-Related Disorders1CTD_human
TgeneMSRAC0740858Substance abuse problem1CTD_human
TgeneMSRAC1510472Drug Dependence1CTD_human
TgeneMSRAC4316881Prescription Drug Abuse1CTD_human