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Fusion Gene Summary | |
Fusion Gene ORF analysis | |
Fusion Genomic Features | |
Fusion Protein Features | |
Fusion Gene Sequence | |
Fusion Gene PPI analysis | |
Related Drugs | |
Related Diseases |
Fusion gene:WWOX-C15orf41 (FusionGDB2 ID:98802) |
Fusion Gene Summary for WWOX-C15orf41 |
Fusion gene summary |
Fusion gene information | Fusion gene name: WWOX-C15orf41 | Fusion gene ID: 98802 | Hgene | Tgene | Gene symbol | WWOX | C15orf41 | Gene ID | 51741 | 84529 |
Gene name | WW domain containing oxidoreductase | chromosome 15 open reading frame 41 | |
Synonyms | D16S432E|EIEE28|FOR|FRA16D|HHCMA56|PRO0128|SCAR12|SDR41C1|WOX1 | HH114 | |
Cytomap | 16q23.1-q23.2 | 15q14 | |
Type of gene | protein-coding | protein-coding | |
Description | WW domain-containing oxidoreductaseWW domain-containing protein WWOXfragile site FRA16D oxidoreductaseshort chain dehydrogenase/reductase family 41C member 1 | protein C15orf41uncharacterized protein C15orf41 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000566780, ENST00000406884, ENST00000539474, ENST00000402655, ENST00000408984, ENST00000355860, ENST00000565791, ENST00000569818, | ENST00000566621, ENST00000437989, ENST00000569302, ENST00000567389, ENST00000562877, ENST00000338183, ENST00000565792, ENST00000562489, ENST00000563167, | |
Fusion gene scores | * DoF score | 26 X 26 X 8=5408 | 8 X 5 X 7=280 |
# samples | 31 | 10 | |
** MAII score | log2(31/5408*10)=-4.12475503100795 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(10/280*10)=-1.48542682717024 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: WWOX [Title/Abstract] AND C15orf41 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | WWOX(78198186)-C15orf41(37100525), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | WWOX-C15orf41 seems lost the major protein functional domain in Hgene partner, which is a tumor suppressor due to the frame-shifted ORF. WWOX-C15orf41 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. WWOX-C15orf41 seems lost the major protein functional domain in Tgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | WWOX | GO:0030178 | negative regulation of Wnt signaling pathway | 19465938 |
Hgene | WWOX | GO:0071560 | cellular response to transforming growth factor beta stimulus | 19366691 |
Fusion gene breakpoints across WWOX (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene breakpoints across C15orf41 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion gene information from two resources (ChiTars 5.0 and ChimerDB 4.0) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | GBM | TCGA-06-5415-01A | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
ChimerDB4 | GBM | TCGA-06-5415-01A | WWOX | chr16 | 78198186 | - | C15orf41 | chr15 | 37100525 | + |
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Fusion Gene ORF analysis for WWOX-C15orf41 |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000566780 | ENST00000566621 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
In-frame | ENST00000566780 | ENST00000437989 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
Frame-shift | ENST00000566780 | ENST00000569302 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
Frame-shift | ENST00000566780 | ENST00000567389 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
In-frame | ENST00000566780 | ENST00000562877 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
Frame-shift | ENST00000566780 | ENST00000338183 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
5CDS-3UTR | ENST00000566780 | ENST00000565792 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
5CDS-3UTR | ENST00000566780 | ENST00000562489 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
5CDS-3UTR | ENST00000566780 | ENST00000563167 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
In-frame | ENST00000406884 | ENST00000566621 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
In-frame | ENST00000406884 | ENST00000437989 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
Frame-shift | ENST00000406884 | ENST00000569302 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
Frame-shift | ENST00000406884 | ENST00000567389 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
In-frame | ENST00000406884 | ENST00000562877 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
Frame-shift | ENST00000406884 | ENST00000338183 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
5CDS-3UTR | ENST00000406884 | ENST00000565792 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
5CDS-3UTR | ENST00000406884 | ENST00000562489 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
5CDS-3UTR | ENST00000406884 | ENST00000563167 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000539474 | ENST00000566621 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000539474 | ENST00000437989 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000539474 | ENST00000569302 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000539474 | ENST00000567389 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000539474 | ENST00000562877 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000539474 | ENST00000338183 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3UTR | ENST00000539474 | ENST00000565792 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3UTR | ENST00000539474 | ENST00000562489 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3UTR | ENST00000539474 | ENST00000563167 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000402655 | ENST00000566621 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000402655 | ENST00000437989 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000402655 | ENST00000569302 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000402655 | ENST00000567389 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000402655 | ENST00000562877 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000402655 | ENST00000338183 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3UTR | ENST00000402655 | ENST00000565792 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3UTR | ENST00000402655 | ENST00000562489 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3UTR | ENST00000402655 | ENST00000563167 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
In-frame | ENST00000408984 | ENST00000566621 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
In-frame | ENST00000408984 | ENST00000437989 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
Frame-shift | ENST00000408984 | ENST00000569302 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
Frame-shift | ENST00000408984 | ENST00000567389 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
In-frame | ENST00000408984 | ENST00000562877 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
Frame-shift | ENST00000408984 | ENST00000338183 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
5CDS-3UTR | ENST00000408984 | ENST00000565792 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
5CDS-3UTR | ENST00000408984 | ENST00000562489 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
5CDS-3UTR | ENST00000408984 | ENST00000563167 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
In-frame | ENST00000355860 | ENST00000566621 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
In-frame | ENST00000355860 | ENST00000437989 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
Frame-shift | ENST00000355860 | ENST00000569302 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
Frame-shift | ENST00000355860 | ENST00000567389 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
In-frame | ENST00000355860 | ENST00000562877 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
Frame-shift | ENST00000355860 | ENST00000338183 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
5CDS-3UTR | ENST00000355860 | ENST00000565792 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
5CDS-3UTR | ENST00000355860 | ENST00000562489 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
5CDS-3UTR | ENST00000355860 | ENST00000563167 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
3UTR-3CDS | ENST00000565791 | ENST00000566621 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
3UTR-3CDS | ENST00000565791 | ENST00000437989 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
3UTR-3CDS | ENST00000565791 | ENST00000569302 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
3UTR-3CDS | ENST00000565791 | ENST00000567389 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
3UTR-3CDS | ENST00000565791 | ENST00000562877 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
3UTR-3CDS | ENST00000565791 | ENST00000338183 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
3UTR-3UTR | ENST00000565791 | ENST00000565792 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
3UTR-3UTR | ENST00000565791 | ENST00000562489 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
3UTR-3UTR | ENST00000565791 | ENST00000563167 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000569818 | ENST00000566621 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000569818 | ENST00000437989 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000569818 | ENST00000569302 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000569818 | ENST00000567389 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000569818 | ENST00000562877 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3CDS | ENST00000569818 | ENST00000338183 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3UTR | ENST00000569818 | ENST00000565792 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3UTR | ENST00000569818 | ENST00000562489 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
intron-3UTR | ENST00000569818 | ENST00000563167 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + |
ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000566780 | WWOX | chr16 | 78198186 | + | ENST00000566621 | C15orf41 | chr15 | 37100525 | + | 2782 | 882 | 366 | 1118 | 250 |
ENST00000566780 | WWOX | chr16 | 78198186 | + | ENST00000437989 | C15orf41 | chr15 | 37100525 | + | 2389 | 882 | 366 | 1079 | 237 |
ENST00000566780 | WWOX | chr16 | 78198186 | + | ENST00000562877 | C15orf41 | chr15 | 37100525 | + | 1012 | 882 | 366 | 1010 | 215 |
ENST00000406884 | WWOX | chr16 | 78198186 | + | ENST00000566621 | C15orf41 | chr15 | 37100525 | + | 2541 | 641 | 125 | 877 | 250 |
ENST00000406884 | WWOX | chr16 | 78198186 | + | ENST00000437989 | C15orf41 | chr15 | 37100525 | + | 2148 | 641 | 125 | 838 | 237 |
ENST00000406884 | WWOX | chr16 | 78198186 | + | ENST00000562877 | C15orf41 | chr15 | 37100525 | + | 771 | 641 | 125 | 769 | 215 |
ENST00000408984 | WWOX | chr16 | 78198186 | + | ENST00000566621 | C15orf41 | chr15 | 37100525 | + | 2501 | 601 | 85 | 837 | 250 |
ENST00000408984 | WWOX | chr16 | 78198186 | + | ENST00000437989 | C15orf41 | chr15 | 37100525 | + | 2108 | 601 | 85 | 798 | 237 |
ENST00000408984 | WWOX | chr16 | 78198186 | + | ENST00000562877 | C15orf41 | chr15 | 37100525 | + | 731 | 601 | 85 | 729 | 215 |
ENST00000355860 | WWOX | chr16 | 78198186 | + | ENST00000566621 | C15orf41 | chr15 | 37100525 | + | 2516 | 616 | 100 | 852 | 250 |
ENST00000355860 | WWOX | chr16 | 78198186 | + | ENST00000437989 | C15orf41 | chr15 | 37100525 | + | 2123 | 616 | 100 | 813 | 237 |
ENST00000355860 | WWOX | chr16 | 78198186 | + | ENST00000562877 | C15orf41 | chr15 | 37100525 | + | 746 | 616 | 100 | 744 | 215 |
DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000566780 | ENST00000566621 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + | 0.004114192 | 0.9958858 |
ENST00000566780 | ENST00000437989 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + | 0.002894606 | 0.9971054 |
ENST00000566780 | ENST00000562877 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + | 0.7979124 | 0.20208761 |
ENST00000406884 | ENST00000566621 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + | 0.00290554 | 0.9970945 |
ENST00000406884 | ENST00000437989 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + | 0.002347837 | 0.99765223 |
ENST00000406884 | ENST00000562877 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + | 0.8534378 | 0.1465622 |
ENST00000408984 | ENST00000566621 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + | 0.002493418 | 0.99750656 |
ENST00000408984 | ENST00000437989 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + | 0.001856953 | 0.9981431 |
ENST00000408984 | ENST00000562877 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + | 0.7318975 | 0.26810247 |
ENST00000355860 | ENST00000566621 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + | 0.002705026 | 0.99729496 |
ENST00000355860 | ENST00000437989 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + | 0.001838661 | 0.9981614 |
ENST00000355860 | ENST00000562877 | WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100525 | + | 0.788592 | 0.211408 |
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Fusion Genomic Features for WWOX-C15orf41 |
FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100524 | + | 0.007513984 | 0.992486 |
WWOX | chr16 | 78198186 | + | C15orf41 | chr15 | 37100524 | + | 0.007513984 | 0.992486 |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page. |
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Fusion Protein Features for WWOX-C15orf41 |
Go to FGviewer for the breakpoints of chr16:78198186-chr15:37100525 - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
. | . |
FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. | FUNCTION: Might normally function as a transcriptional repressor. EWS-fusion-proteins (EFPS) may play a role in the tumorigenic process. They may disturb gene expression by mimicking, or interfering with the normal function of CTD-POLII within the transcription initiation complex. They may also contribute to an aberrant activation of the fusion protein target genes. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000355860 | + | 5 | 6 | 16_49 | 172.0 | 190.0 | Domain | WW 1 |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000355860 | + | 5 | 6 | 57_90 | 172.0 | 190.0 | Domain | WW 2 |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000406884 | + | 5 | 6 | 16_49 | 172.0 | 235.0 | Domain | WW 1 |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000406884 | + | 5 | 6 | 57_90 | 172.0 | 235.0 | Domain | WW 2 |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000408984 | + | 5 | 10 | 16_49 | 172.0 | 311.6666666666667 | Domain | WW 1 |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000408984 | + | 5 | 10 | 57_90 | 172.0 | 311.6666666666667 | Domain | WW 2 |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000566780 | + | 5 | 9 | 16_49 | 172.0 | 415.0 | Domain | WW 1 |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000566780 | + | 5 | 9 | 57_90 | 172.0 | 415.0 | Domain | WW 2 |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000355860 | + | 5 | 6 | 50_55 | 172.0 | 190.0 | Motif | Nuclear localization signal |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000406884 | + | 5 | 6 | 50_55 | 172.0 | 235.0 | Motif | Nuclear localization signal |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000408984 | + | 5 | 10 | 50_55 | 172.0 | 311.6666666666667 | Motif | Nuclear localization signal |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000566780 | + | 5 | 9 | 50_55 | 172.0 | 415.0 | Motif | Nuclear localization signal |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000355860 | + | 5 | 6 | 131_137 | 172.0 | 190.0 | Nucleotide binding | NADP |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000406884 | + | 5 | 6 | 131_137 | 172.0 | 235.0 | Nucleotide binding | NADP |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000408984 | + | 5 | 10 | 131_137 | 172.0 | 311.6666666666667 | Nucleotide binding | NADP |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000566780 | + | 5 | 9 | 131_137 | 172.0 | 415.0 | Nucleotide binding | NADP |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000402655 | + | 1 | 5 | 16_49 | 0 | 312.0 | Domain | WW 1 |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000402655 | + | 1 | 5 | 57_90 | 0 | 312.0 | Domain | WW 2 |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000569818 | + | 1 | 1 | 16_49 | 0 | 37.0 | Domain | WW 1 |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000569818 | + | 1 | 1 | 57_90 | 0 | 37.0 | Domain | WW 2 |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000402655 | + | 1 | 5 | 50_55 | 0 | 312.0 | Motif | Nuclear localization signal |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000569818 | + | 1 | 1 | 50_55 | 0 | 37.0 | Motif | Nuclear localization signal |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000402655 | + | 1 | 5 | 131_137 | 0 | 312.0 | Nucleotide binding | NADP |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000569818 | + | 1 | 1 | 131_137 | 0 | 37.0 | Nucleotide binding | NADP |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000355860 | + | 5 | 6 | 209_273 | 172.0 | 190.0 | Region | Mediates targeting to the mitochondria |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000402655 | + | 1 | 5 | 209_273 | 0 | 312.0 | Region | Mediates targeting to the mitochondria |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000406884 | + | 5 | 6 | 209_273 | 172.0 | 235.0 | Region | Mediates targeting to the mitochondria |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000408984 | + | 5 | 10 | 209_273 | 172.0 | 311.6666666666667 | Region | Mediates targeting to the mitochondria |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000566780 | + | 5 | 9 | 209_273 | 172.0 | 415.0 | Region | Mediates targeting to the mitochondria |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000569818 | + | 1 | 1 | 209_273 | 0 | 37.0 | Region | Mediates targeting to the mitochondria |
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Fusion Gene Sequence for WWOX-C15orf41 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
>In-frame_ENST00000566780_ENST00000566621_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(transcript)=2782nt_BP=882nt GTCCTGGCCCGAAACTGGATGCGCACGCCCCTTCCCTGCGGCGGGGAGGCTGACAAGGCTCCGCTCTATCTCTAGCGCCTCGGAGCGCTC TCCGGCTTTGCTGTCTAGCCCGGCGGCAGCGCGATCTCTTAGGCACTTTCACCGCCTTCCTCTCCAGGCCCTGCCCCTTTGACGCCGGCC GTCGCGATATTGCGGAGACTGGATTTCAGCTTCGTGGTCGGCGGAGCGGCCCCTGGAGGGCGCAGTGCGCAGGCGTGAGCGGTCGGGCCC CGACGCGCGCGGGTCTCGTTTGGAGCGGGAGTGAGTTCCTGAGCGAGTGGACCCGGCAGCGGGCGATAGGGGGGCCAGGTGCCTCCACAG TCAGCCATGGCAGCGCTGCGCTACGCGGGGCTGGACGACACGGACAGTGAGGACGAGCTGCCTCCGGGCTGGGAGGAGAGAACCACCAAG GACGGCTGGGTTTACTACGCCAATCACACCGAGGAGAAGACTCAGTGGGAACATCCAAAAACTGGAAAAAGAAAACGAGTGGCAGGAGAT TTGCCATACGGATGGGAACAAGAAACTGATGAGAACGGACAAGTGTTTTTTGTTGACCATATAAATAAAAGAACCACCTACTTGGACCCA AGACTGGCGTTTACTGTGGATGATAATCCGACCAAGCCAACCACCCGGCAAAGATACGACGGCAGCACCACTGCCATGGAAATTCTCCAG GGCCGGGATTTCACTGGCAAAGTGGTTGTGGTCACTGGAGCTAATTCAGGAATAGGGTTCGAAACCGCCAAGTCTTTTGCCCTCCATGGT GCACATGTGATCTTGGCCTGCAGGAACATGGCAAGGGCGAGTGAAGCAGTGTCACGCATTTTAGAAGAATGGATTTGGGCCAGGCTTAGT CATCTATTGGTATGGATTTATCCAGGAGCTGGACTGCAACCGGGAAAGGGGCATCCTGCTCAAAGCCTGTTTCCCCACGAACATTGTCAC CTTATGCCACAGCATAGCTTGACCCTGAAGATCCTGGAAGAGAAGCTGGGAGGAAAAGGTGAATCCGGAAGCAATTTTACTTTCCTGCAC TGTAAGATCCTGGCAACATCTGCCCTGAACTTCAGCTGAACTCTTGCTGCCCGTAGTCACACCACTACCTCTTTAGACAAACATATCAAG AGTTTCTGTTTTCCTTCATCCCTTGCTGATGTGAACAGCCAAGAACTACAGACACAACCCACTCATTATCAGCATTTCTGTCTCTGTCAA ACAATTAGTTTATAGATAGTCATAATCTTTCTTTCTTCCGGATGGTTTATCCTTGTATGCTGAACAAAAGAAAAAATGTGAAGACTGAAA GGTGTGATTTTTCAATTCTCCTCCCAGTTACCGAATCACCCTCTTATTTTTTTTTCCCTAAGCCTCCGTTCACTGTCTCTCCCTCTCCCT TTCTCTTCATGTGCACTCACAGAGACCCAGCATTGCATTACCATCGTGGAATAATCTAGCGCAAACCTAGGAAAGCTGAAGCCACAAAGT CCAAAGCCACCTTTGTACTCACCTGCAGAGCTCCAGAAGACCTTGATGGCAGCCTGCCTATGCTGTGTGTTTGCTATATTCAATCTTTAC GGCTTCCTGACTTCTGTGACAGTAAGCCAAGTGCAAAAATACACTTGATGAGAATTTCCTCTTTTAATAATGTTATTTGAACACCACATA TTTTAGATTTATCTTATTTGAAAGTATTAGTTCCATTGTGCCTGGAAACCACACTCCTTTAGATTGGGGGCCGAGAGGCGACAACCCAAC ATTGAGGAGAGTTTATTTTTAAACATGGCTAGTTGTCAGTATGTACGTGAGCTAGTATTTTTATGAGTCGAGTTTTTTAAAGGCACATTC TGTATACTGCTTAGTATATGCATTTTATACCATGTAATTATAAAACACTCGAGTAAGTTCAGCATTAGAAATGTTTAGCTTTGTATGAAC TGAGTGTGCCAGAAATAAACCTGGAGCAATTTTTAAATAAGCAAAATAAAGGAGATTTTTCTATTTGTTCACTTTAATTTATTCACTTTT GTGTACTTTTATGTACTGCAAATCAGATTTCAGTCTAAAGCGAAACATCAGTAAGTTAATAATAAACCTATCTTTTGGGAAGTTGAATAT TAATCTGTACCCAAAACGTATTTAGTAAAATATTTGCCCCCGCCACCCTGCCATGCTGACATAACAACTTTTATAATGTTGAATAGATGA TATGGGAAATACTAATAACAACAATGTAATTTTTGCAGACAGCTTTAACTTATATACATTGCTTGATTTTTTTCAAAAGACTAAATATGT CATTTATACTTTGTTTATTTTCTACCAAAGAAGGTTTGTAAAAATATGCCTGCTGCTTTTCCTTTTGAAGGACACAAACCTGGTCCCAAC ATGTGTGGATTTTAACTCTGAGTGGGGTGCATTAAATCAAAAGAGAGAGGCAGAAGATGAAATGCTAAAGAAGGGTCAGGCAAACTTCTG TTTCAGTATAAAATTCATCATGCAGGCTTCTGAGTGAAATAGAATGATTTGAAACCACTACTGTATTGCCTGGATACACACACACACACA CACACACACTTTATACAAAAATGTTAAAAGCAGGTTTCCTGGCATGTTCTAAACTGTTTTTTCTTTAGGAATAAATTACATTTATCTGCA >In-frame_ENST00000566780_ENST00000566621_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(amino acids)=250AA_start in transcript=366_stop in transcript=1118 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRL AFTVDDNPTKPTTRQRYDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWIWARLSHL -------------------------------------------------------------- >In-frame_ENST00000566780_ENST00000437989_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(transcript)=2389nt_BP=882nt GTCCTGGCCCGAAACTGGATGCGCACGCCCCTTCCCTGCGGCGGGGAGGCTGACAAGGCTCCGCTCTATCTCTAGCGCCTCGGAGCGCTC TCCGGCTTTGCTGTCTAGCCCGGCGGCAGCGCGATCTCTTAGGCACTTTCACCGCCTTCCTCTCCAGGCCCTGCCCCTTTGACGCCGGCC GTCGCGATATTGCGGAGACTGGATTTCAGCTTCGTGGTCGGCGGAGCGGCCCCTGGAGGGCGCAGTGCGCAGGCGTGAGCGGTCGGGCCC CGACGCGCGCGGGTCTCGTTTGGAGCGGGAGTGAGTTCCTGAGCGAGTGGACCCGGCAGCGGGCGATAGGGGGGCCAGGTGCCTCCACAG TCAGCCATGGCAGCGCTGCGCTACGCGGGGCTGGACGACACGGACAGTGAGGACGAGCTGCCTCCGGGCTGGGAGGAGAGAACCACCAAG GACGGCTGGGTTTACTACGCCAATCACACCGAGGAGAAGACTCAGTGGGAACATCCAAAAACTGGAAAAAGAAAACGAGTGGCAGGAGAT TTGCCATACGGATGGGAACAAGAAACTGATGAGAACGGACAAGTGTTTTTTGTTGACCATATAAATAAAAGAACCACCTACTTGGACCCA AGACTGGCGTTTACTGTGGATGATAATCCGACCAAGCCAACCACCCGGCAAAGATACGACGGCAGCACCACTGCCATGGAAATTCTCCAG GGCCGGGATTTCACTGGCAAAGTGGTTGTGGTCACTGGAGCTAATTCAGGAATAGGGTTCGAAACCGCCAAGTCTTTTGCCCTCCATGGT GCACATGTGATCTTGGCCTGCAGGAACATGGCAAGGGCGAGTGAAGCAGTGTCACGCATTTTAGAAGAATGGATTTGGGCCAGGCTTAGT CATCTATTGGTATGGATTTATCCAGGAGCTGGACTGCAACCGGGAAAGGGGCATCCTGCTCAAAGCCTGTTTCCCCACGAACATTGTCAC CTTATGCCACAGCATAGCTTGACCCTGAAGATCCTGGAAGAGAAGCTGGGAGGAAAAGAGACCCAGCATTGCATTACCATCGTGGAATAA TCTAGCGCAAACCTAGGAAAGCTGAAGCCACAAAGTCCAAAGCCACCTTTGTACTCACCTGCAGAGCTCCAGAAGACCTTGATGGCAGCC TGCCTATGCTGTGTGTTTGCTATATTCAATCTTTACGGCTTCCTGACTTCTGTGACAGTAAGCCAAGTGCAAAAATACACTTGATGAGAA TTTCCTCTTTTAATAATGTTATTTGAACACCACATATTTTAGATTTATCTTATTTGAAAGTATTAGTTCCATTGTGCCTGGAAACCACAC TCCTTTAGATTGGGGGCCGAGAGGCGACAACCCAACATTGAGGAGAGTTTATTTTTAAACATGGCTAGTTGTCAGTATGTACGTGAGCTA GTATTTTTATGAGTCGAGTTTTTTAAAGGCACATTCTGTATACTGCTTAGTATATGCATTTTATACCATGTAATTATAAAACACTCGAGT AAGTTCAGCATTAGAAATGTTTAGCTTTGTATGAACTGAGTGTGCCAGAAATAAACCTGGAGCAATTTTTAAATAAGCAAAATAAAGGAG ATTTTTCTATTTGTTCACTTTAATTTATTCACTTTTGTGTACTTTTATGTACTGCAAATCAGATTTCAGTCTAAAGCGAAACATCAGTAA GTTAATAATAAACCTATCTTTTGGGAAGTTGAATATTAATCTGTACCCAAAACGTATTTAGTAAAATATTTGCCCCCGCCACCCTGCCAT GCTGACATAACAACTTTTATAATGTTGAATAGATGATATGGGAAATACTAATAACAACAATGTAATTTTTGCAGACAGCTTTAACTTATA TACATTGCTTGATTTTTTTCAAAAGACTAAATATGTCATTTATACTTTGTTTATTTTCTACCAAAGAAGGTTTGTAAAAATATGCCTGCT GCTTTTCCTTTTGAAGGACACAAACCTGGTCCCAACATGTGTGGATTTTAACTCTGAGTGGGGTGCATTAAATCAAAAGAGAGAGGCAGA AGATGAAATGCTAAAGAAGGGTCAGGCAAACTTCTGTTTCAGTATAAAATTCATCATGCAGGCTTCTGAGTGAAATAGAATGATTTGAAA CCACTACTGTATTGCCTGGATACACACACACACACACACACACACTTTATACAAAAATGTTAAAAGCAGGTTTCCTGGCATGTTCTAAAC TGTTTTTTCTTTAGGAATAAATTACATTTATCTGCACAGATGTTGAAAATCCTGTTAAACCCTTGTCAAGGATTTGTTTATTTTACATTA >In-frame_ENST00000566780_ENST00000437989_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(amino acids)=237AA_start in transcript=366_stop in transcript=1079 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRL AFTVDDNPTKPTTRQRYDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWIWARLSHL -------------------------------------------------------------- >In-frame_ENST00000566780_ENST00000562877_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(transcript)=1012nt_BP=882nt GTCCTGGCCCGAAACTGGATGCGCACGCCCCTTCCCTGCGGCGGGGAGGCTGACAAGGCTCCGCTCTATCTCTAGCGCCTCGGAGCGCTC TCCGGCTTTGCTGTCTAGCCCGGCGGCAGCGCGATCTCTTAGGCACTTTCACCGCCTTCCTCTCCAGGCCCTGCCCCTTTGACGCCGGCC GTCGCGATATTGCGGAGACTGGATTTCAGCTTCGTGGTCGGCGGAGCGGCCCCTGGAGGGCGCAGTGCGCAGGCGTGAGCGGTCGGGCCC CGACGCGCGCGGGTCTCGTTTGGAGCGGGAGTGAGTTCCTGAGCGAGTGGACCCGGCAGCGGGCGATAGGGGGGCCAGGTGCCTCCACAG TCAGCCATGGCAGCGCTGCGCTACGCGGGGCTGGACGACACGGACAGTGAGGACGAGCTGCCTCCGGGCTGGGAGGAGAGAACCACCAAG GACGGCTGGGTTTACTACGCCAATCACACCGAGGAGAAGACTCAGTGGGAACATCCAAAAACTGGAAAAAGAAAACGAGTGGCAGGAGAT TTGCCATACGGATGGGAACAAGAAACTGATGAGAACGGACAAGTGTTTTTTGTTGACCATATAAATAAAAGAACCACCTACTTGGACCCA AGACTGGCGTTTACTGTGGATGATAATCCGACCAAGCCAACCACCCGGCAAAGATACGACGGCAGCACCACTGCCATGGAAATTCTCCAG GGCCGGGATTTCACTGGCAAAGTGGTTGTGGTCACTGGAGCTAATTCAGGAATAGGGTTCGAAACCGCCAAGTCTTTTGCCCTCCATGGT GCACATGTGATCTTGGCCTGCAGGAACATGGCAAGGGCGAGTGAAGCAGTGTCACGCATTTTAGAAGAATGGATTTGGGCCAGGCTTAGT CATCTATTGGTATGGATTTATCCAGGAGCTGGACTGCAACCGGGAAAGGGGCATCCTGCTCAAAGCCTGTTTCCCCACGAACATTGTCAC >In-frame_ENST00000566780_ENST00000562877_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(amino acids)=215AA_start in transcript=366_stop in transcript=1010 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRL AFTVDDNPTKPTTRQRYDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWIWARLSHL -------------------------------------------------------------- >In-frame_ENST00000406884_ENST00000566621_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(transcript)=2541nt_BP=641nt GCAGTGCGCAGGCGTGAGCGGTCGGGCCCCGACGCGCGCGGGTCTCGTTTGGAGCGGGAGTGAGTTCCTGAGCGAGTGGACCCGGCAGCG GGCGATAGGGGGGCCAGGTGCCTCCACAGTCAGCCATGGCAGCGCTGCGCTACGCGGGGCTGGACGACACGGACAGTGAGGACGAGCTGC CTCCGGGCTGGGAGGAGAGAACCACCAAGGACGGCTGGGTTTACTACGCCAATCACACCGAGGAGAAGACTCAGTGGGAACATCCAAAAA CTGGAAAAAGAAAACGAGTGGCAGGAGATTTGCCATACGGATGGGAACAAGAAACTGATGAGAACGGACAAGTGTTTTTTGTTGACCATA TAAATAAAAGAACCACCTACTTGGACCCAAGACTGGCGTTTACTGTGGATGATAATCCGACCAAGCCAACCACCCGGCAAAGATACGACG GCAGCACCACTGCCATGGAAATTCTCCAGGGCCGGGATTTCACTGGCAAAGTGGTTGTGGTCACTGGAGCTAATTCAGGAATAGGGTTCG AAACCGCCAAGTCTTTTGCCCTCCATGGTGCACATGTGATCTTGGCCTGCAGGAACATGGCAAGGGCGAGTGAAGCAGTGTCACGCATTT TAGAAGAATGGATTTGGGCCAGGCTTAGTCATCTATTGGTATGGATTTATCCAGGAGCTGGACTGCAACCGGGAAAGGGGCATCCTGCTC AAAGCCTGTTTCCCCACGAACATTGTCACCTTATGCCACAGCATAGCTTGACCCTGAAGATCCTGGAAGAGAAGCTGGGAGGAAAAGGTG AATCCGGAAGCAATTTTACTTTCCTGCACTGTAAGATCCTGGCAACATCTGCCCTGAACTTCAGCTGAACTCTTGCTGCCCGTAGTCACA CCACTACCTCTTTAGACAAACATATCAAGAGTTTCTGTTTTCCTTCATCCCTTGCTGATGTGAACAGCCAAGAACTACAGACACAACCCA CTCATTATCAGCATTTCTGTCTCTGTCAAACAATTAGTTTATAGATAGTCATAATCTTTCTTTCTTCCGGATGGTTTATCCTTGTATGCT GAACAAAAGAAAAAATGTGAAGACTGAAAGGTGTGATTTTTCAATTCTCCTCCCAGTTACCGAATCACCCTCTTATTTTTTTTTCCCTAA GCCTCCGTTCACTGTCTCTCCCTCTCCCTTTCTCTTCATGTGCACTCACAGAGACCCAGCATTGCATTACCATCGTGGAATAATCTAGCG CAAACCTAGGAAAGCTGAAGCCACAAAGTCCAAAGCCACCTTTGTACTCACCTGCAGAGCTCCAGAAGACCTTGATGGCAGCCTGCCTAT GCTGTGTGTTTGCTATATTCAATCTTTACGGCTTCCTGACTTCTGTGACAGTAAGCCAAGTGCAAAAATACACTTGATGAGAATTTCCTC TTTTAATAATGTTATTTGAACACCACATATTTTAGATTTATCTTATTTGAAAGTATTAGTTCCATTGTGCCTGGAAACCACACTCCTTTA GATTGGGGGCCGAGAGGCGACAACCCAACATTGAGGAGAGTTTATTTTTAAACATGGCTAGTTGTCAGTATGTACGTGAGCTAGTATTTT TATGAGTCGAGTTTTTTAAAGGCACATTCTGTATACTGCTTAGTATATGCATTTTATACCATGTAATTATAAAACACTCGAGTAAGTTCA GCATTAGAAATGTTTAGCTTTGTATGAACTGAGTGTGCCAGAAATAAACCTGGAGCAATTTTTAAATAAGCAAAATAAAGGAGATTTTTC TATTTGTTCACTTTAATTTATTCACTTTTGTGTACTTTTATGTACTGCAAATCAGATTTCAGTCTAAAGCGAAACATCAGTAAGTTAATA ATAAACCTATCTTTTGGGAAGTTGAATATTAATCTGTACCCAAAACGTATTTAGTAAAATATTTGCCCCCGCCACCCTGCCATGCTGACA TAACAACTTTTATAATGTTGAATAGATGATATGGGAAATACTAATAACAACAATGTAATTTTTGCAGACAGCTTTAACTTATATACATTG CTTGATTTTTTTCAAAAGACTAAATATGTCATTTATACTTTGTTTATTTTCTACCAAAGAAGGTTTGTAAAAATATGCCTGCTGCTTTTC CTTTTGAAGGACACAAACCTGGTCCCAACATGTGTGGATTTTAACTCTGAGTGGGGTGCATTAAATCAAAAGAGAGAGGCAGAAGATGAA ATGCTAAAGAAGGGTCAGGCAAACTTCTGTTTCAGTATAAAATTCATCATGCAGGCTTCTGAGTGAAATAGAATGATTTGAAACCACTAC TGTATTGCCTGGATACACACACACACACACACACACACTTTATACAAAAATGTTAAAAGCAGGTTTCCTGGCATGTTCTAAACTGTTTTT TCTTTAGGAATAAATTACATTTATCTGCACAGATGTTGAAAATCCTGTTAAACCCTTGTCAAGGATTTGTTTATTTTACATTAAACAAAT >In-frame_ENST00000406884_ENST00000566621_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(amino acids)=250AA_start in transcript=125_stop in transcript=877 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRL AFTVDDNPTKPTTRQRYDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWIWARLSHL -------------------------------------------------------------- >In-frame_ENST00000406884_ENST00000437989_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(transcript)=2148nt_BP=641nt GCAGTGCGCAGGCGTGAGCGGTCGGGCCCCGACGCGCGCGGGTCTCGTTTGGAGCGGGAGTGAGTTCCTGAGCGAGTGGACCCGGCAGCG GGCGATAGGGGGGCCAGGTGCCTCCACAGTCAGCCATGGCAGCGCTGCGCTACGCGGGGCTGGACGACACGGACAGTGAGGACGAGCTGC CTCCGGGCTGGGAGGAGAGAACCACCAAGGACGGCTGGGTTTACTACGCCAATCACACCGAGGAGAAGACTCAGTGGGAACATCCAAAAA CTGGAAAAAGAAAACGAGTGGCAGGAGATTTGCCATACGGATGGGAACAAGAAACTGATGAGAACGGACAAGTGTTTTTTGTTGACCATA TAAATAAAAGAACCACCTACTTGGACCCAAGACTGGCGTTTACTGTGGATGATAATCCGACCAAGCCAACCACCCGGCAAAGATACGACG GCAGCACCACTGCCATGGAAATTCTCCAGGGCCGGGATTTCACTGGCAAAGTGGTTGTGGTCACTGGAGCTAATTCAGGAATAGGGTTCG AAACCGCCAAGTCTTTTGCCCTCCATGGTGCACATGTGATCTTGGCCTGCAGGAACATGGCAAGGGCGAGTGAAGCAGTGTCACGCATTT TAGAAGAATGGATTTGGGCCAGGCTTAGTCATCTATTGGTATGGATTTATCCAGGAGCTGGACTGCAACCGGGAAAGGGGCATCCTGCTC AAAGCCTGTTTCCCCACGAACATTGTCACCTTATGCCACAGCATAGCTTGACCCTGAAGATCCTGGAAGAGAAGCTGGGAGGAAAAGAGA CCCAGCATTGCATTACCATCGTGGAATAATCTAGCGCAAACCTAGGAAAGCTGAAGCCACAAAGTCCAAAGCCACCTTTGTACTCACCTG CAGAGCTCCAGAAGACCTTGATGGCAGCCTGCCTATGCTGTGTGTTTGCTATATTCAATCTTTACGGCTTCCTGACTTCTGTGACAGTAA GCCAAGTGCAAAAATACACTTGATGAGAATTTCCTCTTTTAATAATGTTATTTGAACACCACATATTTTAGATTTATCTTATTTGAAAGT ATTAGTTCCATTGTGCCTGGAAACCACACTCCTTTAGATTGGGGGCCGAGAGGCGACAACCCAACATTGAGGAGAGTTTATTTTTAAACA TGGCTAGTTGTCAGTATGTACGTGAGCTAGTATTTTTATGAGTCGAGTTTTTTAAAGGCACATTCTGTATACTGCTTAGTATATGCATTT TATACCATGTAATTATAAAACACTCGAGTAAGTTCAGCATTAGAAATGTTTAGCTTTGTATGAACTGAGTGTGCCAGAAATAAACCTGGA GCAATTTTTAAATAAGCAAAATAAAGGAGATTTTTCTATTTGTTCACTTTAATTTATTCACTTTTGTGTACTTTTATGTACTGCAAATCA GATTTCAGTCTAAAGCGAAACATCAGTAAGTTAATAATAAACCTATCTTTTGGGAAGTTGAATATTAATCTGTACCCAAAACGTATTTAG TAAAATATTTGCCCCCGCCACCCTGCCATGCTGACATAACAACTTTTATAATGTTGAATAGATGATATGGGAAATACTAATAACAACAAT GTAATTTTTGCAGACAGCTTTAACTTATATACATTGCTTGATTTTTTTCAAAAGACTAAATATGTCATTTATACTTTGTTTATTTTCTAC CAAAGAAGGTTTGTAAAAATATGCCTGCTGCTTTTCCTTTTGAAGGACACAAACCTGGTCCCAACATGTGTGGATTTTAACTCTGAGTGG GGTGCATTAAATCAAAAGAGAGAGGCAGAAGATGAAATGCTAAAGAAGGGTCAGGCAAACTTCTGTTTCAGTATAAAATTCATCATGCAG GCTTCTGAGTGAAATAGAATGATTTGAAACCACTACTGTATTGCCTGGATACACACACACACACACACACACACTTTATACAAAAATGTT AAAAGCAGGTTTCCTGGCATGTTCTAAACTGTTTTTTCTTTAGGAATAAATTACATTTATCTGCACAGATGTTGAAAATCCTGTTAAACC >In-frame_ENST00000406884_ENST00000437989_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(amino acids)=237AA_start in transcript=125_stop in transcript=838 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRL AFTVDDNPTKPTTRQRYDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWIWARLSHL -------------------------------------------------------------- >In-frame_ENST00000406884_ENST00000562877_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(transcript)=771nt_BP=641nt GCAGTGCGCAGGCGTGAGCGGTCGGGCCCCGACGCGCGCGGGTCTCGTTTGGAGCGGGAGTGAGTTCCTGAGCGAGTGGACCCGGCAGCG GGCGATAGGGGGGCCAGGTGCCTCCACAGTCAGCCATGGCAGCGCTGCGCTACGCGGGGCTGGACGACACGGACAGTGAGGACGAGCTGC CTCCGGGCTGGGAGGAGAGAACCACCAAGGACGGCTGGGTTTACTACGCCAATCACACCGAGGAGAAGACTCAGTGGGAACATCCAAAAA CTGGAAAAAGAAAACGAGTGGCAGGAGATTTGCCATACGGATGGGAACAAGAAACTGATGAGAACGGACAAGTGTTTTTTGTTGACCATA TAAATAAAAGAACCACCTACTTGGACCCAAGACTGGCGTTTACTGTGGATGATAATCCGACCAAGCCAACCACCCGGCAAAGATACGACG GCAGCACCACTGCCATGGAAATTCTCCAGGGCCGGGATTTCACTGGCAAAGTGGTTGTGGTCACTGGAGCTAATTCAGGAATAGGGTTCG AAACCGCCAAGTCTTTTGCCCTCCATGGTGCACATGTGATCTTGGCCTGCAGGAACATGGCAAGGGCGAGTGAAGCAGTGTCACGCATTT TAGAAGAATGGATTTGGGCCAGGCTTAGTCATCTATTGGTATGGATTTATCCAGGAGCTGGACTGCAACCGGGAAAGGGGCATCCTGCTC >In-frame_ENST00000406884_ENST00000562877_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(amino acids)=215AA_start in transcript=125_stop in transcript=769 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRL AFTVDDNPTKPTTRQRYDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWIWARLSHL -------------------------------------------------------------- >In-frame_ENST00000408984_ENST00000566621_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(transcript)=2501nt_BP=601nt GGTCTCGTTTGGAGCGGGAGTGAGTTCCTGAGCGAGTGGACCCGGCAGCGGGCGATAGGGGGGCCAGGTGCCTCCACAGTCAGCCATGGC AGCGCTGCGCTACGCGGGGCTGGACGACACGGACAGTGAGGACGAGCTGCCTCCGGGCTGGGAGGAGAGAACCACCAAGGACGGCTGGGT TTACTACGCCAATCACACCGAGGAGAAGACTCAGTGGGAACATCCAAAAACTGGAAAAAGAAAACGAGTGGCAGGAGATTTGCCATACGG ATGGGAACAAGAAACTGATGAGAACGGACAAGTGTTTTTTGTTGACCATATAAATAAAAGAACCACCTACTTGGACCCAAGACTGGCGTT TACTGTGGATGATAATCCGACCAAGCCAACCACCCGGCAAAGATACGACGGCAGCACCACTGCCATGGAAATTCTCCAGGGCCGGGATTT CACTGGCAAAGTGGTTGTGGTCACTGGAGCTAATTCAGGAATAGGGTTCGAAACCGCCAAGTCTTTTGCCCTCCATGGTGCACATGTGAT CTTGGCCTGCAGGAACATGGCAAGGGCGAGTGAAGCAGTGTCACGCATTTTAGAAGAATGGATTTGGGCCAGGCTTAGTCATCTATTGGT ATGGATTTATCCAGGAGCTGGACTGCAACCGGGAAAGGGGCATCCTGCTCAAAGCCTGTTTCCCCACGAACATTGTCACCTTATGCCACA GCATAGCTTGACCCTGAAGATCCTGGAAGAGAAGCTGGGAGGAAAAGGTGAATCCGGAAGCAATTTTACTTTCCTGCACTGTAAGATCCT GGCAACATCTGCCCTGAACTTCAGCTGAACTCTTGCTGCCCGTAGTCACACCACTACCTCTTTAGACAAACATATCAAGAGTTTCTGTTT TCCTTCATCCCTTGCTGATGTGAACAGCCAAGAACTACAGACACAACCCACTCATTATCAGCATTTCTGTCTCTGTCAAACAATTAGTTT ATAGATAGTCATAATCTTTCTTTCTTCCGGATGGTTTATCCTTGTATGCTGAACAAAAGAAAAAATGTGAAGACTGAAAGGTGTGATTTT TCAATTCTCCTCCCAGTTACCGAATCACCCTCTTATTTTTTTTTCCCTAAGCCTCCGTTCACTGTCTCTCCCTCTCCCTTTCTCTTCATG TGCACTCACAGAGACCCAGCATTGCATTACCATCGTGGAATAATCTAGCGCAAACCTAGGAAAGCTGAAGCCACAAAGTCCAAAGCCACC TTTGTACTCACCTGCAGAGCTCCAGAAGACCTTGATGGCAGCCTGCCTATGCTGTGTGTTTGCTATATTCAATCTTTACGGCTTCCTGAC TTCTGTGACAGTAAGCCAAGTGCAAAAATACACTTGATGAGAATTTCCTCTTTTAATAATGTTATTTGAACACCACATATTTTAGATTTA TCTTATTTGAAAGTATTAGTTCCATTGTGCCTGGAAACCACACTCCTTTAGATTGGGGGCCGAGAGGCGACAACCCAACATTGAGGAGAG TTTATTTTTAAACATGGCTAGTTGTCAGTATGTACGTGAGCTAGTATTTTTATGAGTCGAGTTTTTTAAAGGCACATTCTGTATACTGCT TAGTATATGCATTTTATACCATGTAATTATAAAACACTCGAGTAAGTTCAGCATTAGAAATGTTTAGCTTTGTATGAACTGAGTGTGCCA GAAATAAACCTGGAGCAATTTTTAAATAAGCAAAATAAAGGAGATTTTTCTATTTGTTCACTTTAATTTATTCACTTTTGTGTACTTTTA TGTACTGCAAATCAGATTTCAGTCTAAAGCGAAACATCAGTAAGTTAATAATAAACCTATCTTTTGGGAAGTTGAATATTAATCTGTACC CAAAACGTATTTAGTAAAATATTTGCCCCCGCCACCCTGCCATGCTGACATAACAACTTTTATAATGTTGAATAGATGATATGGGAAATA CTAATAACAACAATGTAATTTTTGCAGACAGCTTTAACTTATATACATTGCTTGATTTTTTTCAAAAGACTAAATATGTCATTTATACTT TGTTTATTTTCTACCAAAGAAGGTTTGTAAAAATATGCCTGCTGCTTTTCCTTTTGAAGGACACAAACCTGGTCCCAACATGTGTGGATT TTAACTCTGAGTGGGGTGCATTAAATCAAAAGAGAGAGGCAGAAGATGAAATGCTAAAGAAGGGTCAGGCAAACTTCTGTTTCAGTATAA AATTCATCATGCAGGCTTCTGAGTGAAATAGAATGATTTGAAACCACTACTGTATTGCCTGGATACACACACACACACACACACACACTT TATACAAAAATGTTAAAAGCAGGTTTCCTGGCATGTTCTAAACTGTTTTTTCTTTAGGAATAAATTACATTTATCTGCACAGATGTTGAA >In-frame_ENST00000408984_ENST00000566621_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(amino acids)=250AA_start in transcript=85_stop in transcript=837 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRL AFTVDDNPTKPTTRQRYDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWIWARLSHL -------------------------------------------------------------- >In-frame_ENST00000408984_ENST00000437989_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(transcript)=2108nt_BP=601nt GGTCTCGTTTGGAGCGGGAGTGAGTTCCTGAGCGAGTGGACCCGGCAGCGGGCGATAGGGGGGCCAGGTGCCTCCACAGTCAGCCATGGC AGCGCTGCGCTACGCGGGGCTGGACGACACGGACAGTGAGGACGAGCTGCCTCCGGGCTGGGAGGAGAGAACCACCAAGGACGGCTGGGT TTACTACGCCAATCACACCGAGGAGAAGACTCAGTGGGAACATCCAAAAACTGGAAAAAGAAAACGAGTGGCAGGAGATTTGCCATACGG ATGGGAACAAGAAACTGATGAGAACGGACAAGTGTTTTTTGTTGACCATATAAATAAAAGAACCACCTACTTGGACCCAAGACTGGCGTT TACTGTGGATGATAATCCGACCAAGCCAACCACCCGGCAAAGATACGACGGCAGCACCACTGCCATGGAAATTCTCCAGGGCCGGGATTT CACTGGCAAAGTGGTTGTGGTCACTGGAGCTAATTCAGGAATAGGGTTCGAAACCGCCAAGTCTTTTGCCCTCCATGGTGCACATGTGAT CTTGGCCTGCAGGAACATGGCAAGGGCGAGTGAAGCAGTGTCACGCATTTTAGAAGAATGGATTTGGGCCAGGCTTAGTCATCTATTGGT ATGGATTTATCCAGGAGCTGGACTGCAACCGGGAAAGGGGCATCCTGCTCAAAGCCTGTTTCCCCACGAACATTGTCACCTTATGCCACA GCATAGCTTGACCCTGAAGATCCTGGAAGAGAAGCTGGGAGGAAAAGAGACCCAGCATTGCATTACCATCGTGGAATAATCTAGCGCAAA CCTAGGAAAGCTGAAGCCACAAAGTCCAAAGCCACCTTTGTACTCACCTGCAGAGCTCCAGAAGACCTTGATGGCAGCCTGCCTATGCTG TGTGTTTGCTATATTCAATCTTTACGGCTTCCTGACTTCTGTGACAGTAAGCCAAGTGCAAAAATACACTTGATGAGAATTTCCTCTTTT AATAATGTTATTTGAACACCACATATTTTAGATTTATCTTATTTGAAAGTATTAGTTCCATTGTGCCTGGAAACCACACTCCTTTAGATT GGGGGCCGAGAGGCGACAACCCAACATTGAGGAGAGTTTATTTTTAAACATGGCTAGTTGTCAGTATGTACGTGAGCTAGTATTTTTATG AGTCGAGTTTTTTAAAGGCACATTCTGTATACTGCTTAGTATATGCATTTTATACCATGTAATTATAAAACACTCGAGTAAGTTCAGCAT TAGAAATGTTTAGCTTTGTATGAACTGAGTGTGCCAGAAATAAACCTGGAGCAATTTTTAAATAAGCAAAATAAAGGAGATTTTTCTATT TGTTCACTTTAATTTATTCACTTTTGTGTACTTTTATGTACTGCAAATCAGATTTCAGTCTAAAGCGAAACATCAGTAAGTTAATAATAA ACCTATCTTTTGGGAAGTTGAATATTAATCTGTACCCAAAACGTATTTAGTAAAATATTTGCCCCCGCCACCCTGCCATGCTGACATAAC AACTTTTATAATGTTGAATAGATGATATGGGAAATACTAATAACAACAATGTAATTTTTGCAGACAGCTTTAACTTATATACATTGCTTG ATTTTTTTCAAAAGACTAAATATGTCATTTATACTTTGTTTATTTTCTACCAAAGAAGGTTTGTAAAAATATGCCTGCTGCTTTTCCTTT TGAAGGACACAAACCTGGTCCCAACATGTGTGGATTTTAACTCTGAGTGGGGTGCATTAAATCAAAAGAGAGAGGCAGAAGATGAAATGC TAAAGAAGGGTCAGGCAAACTTCTGTTTCAGTATAAAATTCATCATGCAGGCTTCTGAGTGAAATAGAATGATTTGAAACCACTACTGTA TTGCCTGGATACACACACACACACACACACACACTTTATACAAAAATGTTAAAAGCAGGTTTCCTGGCATGTTCTAAACTGTTTTTTCTT TAGGAATAAATTACATTTATCTGCACAGATGTTGAAAATCCTGTTAAACCCTTGTCAAGGATTTGTTTATTTTACATTAAACAAATTTAT >In-frame_ENST00000408984_ENST00000437989_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(amino acids)=237AA_start in transcript=85_stop in transcript=798 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRL AFTVDDNPTKPTTRQRYDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWIWARLSHL -------------------------------------------------------------- >In-frame_ENST00000408984_ENST00000562877_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(transcript)=731nt_BP=601nt GGTCTCGTTTGGAGCGGGAGTGAGTTCCTGAGCGAGTGGACCCGGCAGCGGGCGATAGGGGGGCCAGGTGCCTCCACAGTCAGCCATGGC AGCGCTGCGCTACGCGGGGCTGGACGACACGGACAGTGAGGACGAGCTGCCTCCGGGCTGGGAGGAGAGAACCACCAAGGACGGCTGGGT TTACTACGCCAATCACACCGAGGAGAAGACTCAGTGGGAACATCCAAAAACTGGAAAAAGAAAACGAGTGGCAGGAGATTTGCCATACGG ATGGGAACAAGAAACTGATGAGAACGGACAAGTGTTTTTTGTTGACCATATAAATAAAAGAACCACCTACTTGGACCCAAGACTGGCGTT TACTGTGGATGATAATCCGACCAAGCCAACCACCCGGCAAAGATACGACGGCAGCACCACTGCCATGGAAATTCTCCAGGGCCGGGATTT CACTGGCAAAGTGGTTGTGGTCACTGGAGCTAATTCAGGAATAGGGTTCGAAACCGCCAAGTCTTTTGCCCTCCATGGTGCACATGTGAT CTTGGCCTGCAGGAACATGGCAAGGGCGAGTGAAGCAGTGTCACGCATTTTAGAAGAATGGATTTGGGCCAGGCTTAGTCATCTATTGGT ATGGATTTATCCAGGAGCTGGACTGCAACCGGGAAAGGGGCATCCTGCTCAAAGCCTGTTTCCCCACGAACATTGTCACCTTATGCCACA >In-frame_ENST00000408984_ENST00000562877_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(amino acids)=215AA_start in transcript=85_stop in transcript=729 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRL AFTVDDNPTKPTTRQRYDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWIWARLSHL -------------------------------------------------------------- >In-frame_ENST00000355860_ENST00000566621_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(transcript)=2516nt_BP=616nt GCCCCGACGCGCGCGGGTCTCGTTTGGAGCGGGAGTGAGTTCCTGAGCGAGTGGACCCGGCAGCGGGCGATAGGGGGGCCAGGTGCCTCC ACAGTCAGCCATGGCAGCGCTGCGCTACGCGGGGCTGGACGACACGGACAGTGAGGACGAGCTGCCTCCGGGCTGGGAGGAGAGAACCAC CAAGGACGGCTGGGTTTACTACGCCAATCACACCGAGGAGAAGACTCAGTGGGAACATCCAAAAACTGGAAAAAGAAAACGAGTGGCAGG AGATTTGCCATACGGATGGGAACAAGAAACTGATGAGAACGGACAAGTGTTTTTTGTTGACCATATAAATAAAAGAACCACCTACTTGGA CCCAAGACTGGCGTTTACTGTGGATGATAATCCGACCAAGCCAACCACCCGGCAAAGATACGACGGCAGCACCACTGCCATGGAAATTCT CCAGGGCCGGGATTTCACTGGCAAAGTGGTTGTGGTCACTGGAGCTAATTCAGGAATAGGGTTCGAAACCGCCAAGTCTTTTGCCCTCCA TGGTGCACATGTGATCTTGGCCTGCAGGAACATGGCAAGGGCGAGTGAAGCAGTGTCACGCATTTTAGAAGAATGGATTTGGGCCAGGCT TAGTCATCTATTGGTATGGATTTATCCAGGAGCTGGACTGCAACCGGGAAAGGGGCATCCTGCTCAAAGCCTGTTTCCCCACGAACATTG TCACCTTATGCCACAGCATAGCTTGACCCTGAAGATCCTGGAAGAGAAGCTGGGAGGAAAAGGTGAATCCGGAAGCAATTTTACTTTCCT GCACTGTAAGATCCTGGCAACATCTGCCCTGAACTTCAGCTGAACTCTTGCTGCCCGTAGTCACACCACTACCTCTTTAGACAAACATAT CAAGAGTTTCTGTTTTCCTTCATCCCTTGCTGATGTGAACAGCCAAGAACTACAGACACAACCCACTCATTATCAGCATTTCTGTCTCTG TCAAACAATTAGTTTATAGATAGTCATAATCTTTCTTTCTTCCGGATGGTTTATCCTTGTATGCTGAACAAAAGAAAAAATGTGAAGACT GAAAGGTGTGATTTTTCAATTCTCCTCCCAGTTACCGAATCACCCTCTTATTTTTTTTTCCCTAAGCCTCCGTTCACTGTCTCTCCCTCT CCCTTTCTCTTCATGTGCACTCACAGAGACCCAGCATTGCATTACCATCGTGGAATAATCTAGCGCAAACCTAGGAAAGCTGAAGCCACA AAGTCCAAAGCCACCTTTGTACTCACCTGCAGAGCTCCAGAAGACCTTGATGGCAGCCTGCCTATGCTGTGTGTTTGCTATATTCAATCT TTACGGCTTCCTGACTTCTGTGACAGTAAGCCAAGTGCAAAAATACACTTGATGAGAATTTCCTCTTTTAATAATGTTATTTGAACACCA CATATTTTAGATTTATCTTATTTGAAAGTATTAGTTCCATTGTGCCTGGAAACCACACTCCTTTAGATTGGGGGCCGAGAGGCGACAACC CAACATTGAGGAGAGTTTATTTTTAAACATGGCTAGTTGTCAGTATGTACGTGAGCTAGTATTTTTATGAGTCGAGTTTTTTAAAGGCAC ATTCTGTATACTGCTTAGTATATGCATTTTATACCATGTAATTATAAAACACTCGAGTAAGTTCAGCATTAGAAATGTTTAGCTTTGTAT GAACTGAGTGTGCCAGAAATAAACCTGGAGCAATTTTTAAATAAGCAAAATAAAGGAGATTTTTCTATTTGTTCACTTTAATTTATTCAC TTTTGTGTACTTTTATGTACTGCAAATCAGATTTCAGTCTAAAGCGAAACATCAGTAAGTTAATAATAAACCTATCTTTTGGGAAGTTGA ATATTAATCTGTACCCAAAACGTATTTAGTAAAATATTTGCCCCCGCCACCCTGCCATGCTGACATAACAACTTTTATAATGTTGAATAG ATGATATGGGAAATACTAATAACAACAATGTAATTTTTGCAGACAGCTTTAACTTATATACATTGCTTGATTTTTTTCAAAAGACTAAAT ATGTCATTTATACTTTGTTTATTTTCTACCAAAGAAGGTTTGTAAAAATATGCCTGCTGCTTTTCCTTTTGAAGGACACAAACCTGGTCC CAACATGTGTGGATTTTAACTCTGAGTGGGGTGCATTAAATCAAAAGAGAGAGGCAGAAGATGAAATGCTAAAGAAGGGTCAGGCAAACT TCTGTTTCAGTATAAAATTCATCATGCAGGCTTCTGAGTGAAATAGAATGATTTGAAACCACTACTGTATTGCCTGGATACACACACACA CACACACACACACTTTATACAAAAATGTTAAAAGCAGGTTTCCTGGCATGTTCTAAACTGTTTTTTCTTTAGGAATAAATTACATTTATC >In-frame_ENST00000355860_ENST00000566621_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(amino acids)=250AA_start in transcript=100_stop in transcript=852 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRL AFTVDDNPTKPTTRQRYDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWIWARLSHL -------------------------------------------------------------- >In-frame_ENST00000355860_ENST00000437989_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(transcript)=2123nt_BP=616nt GCCCCGACGCGCGCGGGTCTCGTTTGGAGCGGGAGTGAGTTCCTGAGCGAGTGGACCCGGCAGCGGGCGATAGGGGGGCCAGGTGCCTCC ACAGTCAGCCATGGCAGCGCTGCGCTACGCGGGGCTGGACGACACGGACAGTGAGGACGAGCTGCCTCCGGGCTGGGAGGAGAGAACCAC CAAGGACGGCTGGGTTTACTACGCCAATCACACCGAGGAGAAGACTCAGTGGGAACATCCAAAAACTGGAAAAAGAAAACGAGTGGCAGG AGATTTGCCATACGGATGGGAACAAGAAACTGATGAGAACGGACAAGTGTTTTTTGTTGACCATATAAATAAAAGAACCACCTACTTGGA CCCAAGACTGGCGTTTACTGTGGATGATAATCCGACCAAGCCAACCACCCGGCAAAGATACGACGGCAGCACCACTGCCATGGAAATTCT CCAGGGCCGGGATTTCACTGGCAAAGTGGTTGTGGTCACTGGAGCTAATTCAGGAATAGGGTTCGAAACCGCCAAGTCTTTTGCCCTCCA TGGTGCACATGTGATCTTGGCCTGCAGGAACATGGCAAGGGCGAGTGAAGCAGTGTCACGCATTTTAGAAGAATGGATTTGGGCCAGGCT TAGTCATCTATTGGTATGGATTTATCCAGGAGCTGGACTGCAACCGGGAAAGGGGCATCCTGCTCAAAGCCTGTTTCCCCACGAACATTG TCACCTTATGCCACAGCATAGCTTGACCCTGAAGATCCTGGAAGAGAAGCTGGGAGGAAAAGAGACCCAGCATTGCATTACCATCGTGGA ATAATCTAGCGCAAACCTAGGAAAGCTGAAGCCACAAAGTCCAAAGCCACCTTTGTACTCACCTGCAGAGCTCCAGAAGACCTTGATGGC AGCCTGCCTATGCTGTGTGTTTGCTATATTCAATCTTTACGGCTTCCTGACTTCTGTGACAGTAAGCCAAGTGCAAAAATACACTTGATG AGAATTTCCTCTTTTAATAATGTTATTTGAACACCACATATTTTAGATTTATCTTATTTGAAAGTATTAGTTCCATTGTGCCTGGAAACC ACACTCCTTTAGATTGGGGGCCGAGAGGCGACAACCCAACATTGAGGAGAGTTTATTTTTAAACATGGCTAGTTGTCAGTATGTACGTGA GCTAGTATTTTTATGAGTCGAGTTTTTTAAAGGCACATTCTGTATACTGCTTAGTATATGCATTTTATACCATGTAATTATAAAACACTC GAGTAAGTTCAGCATTAGAAATGTTTAGCTTTGTATGAACTGAGTGTGCCAGAAATAAACCTGGAGCAATTTTTAAATAAGCAAAATAAA GGAGATTTTTCTATTTGTTCACTTTAATTTATTCACTTTTGTGTACTTTTATGTACTGCAAATCAGATTTCAGTCTAAAGCGAAACATCA GTAAGTTAATAATAAACCTATCTTTTGGGAAGTTGAATATTAATCTGTACCCAAAACGTATTTAGTAAAATATTTGCCCCCGCCACCCTG CCATGCTGACATAACAACTTTTATAATGTTGAATAGATGATATGGGAAATACTAATAACAACAATGTAATTTTTGCAGACAGCTTTAACT TATATACATTGCTTGATTTTTTTCAAAAGACTAAATATGTCATTTATACTTTGTTTATTTTCTACCAAAGAAGGTTTGTAAAAATATGCC TGCTGCTTTTCCTTTTGAAGGACACAAACCTGGTCCCAACATGTGTGGATTTTAACTCTGAGTGGGGTGCATTAAATCAAAAGAGAGAGG CAGAAGATGAAATGCTAAAGAAGGGTCAGGCAAACTTCTGTTTCAGTATAAAATTCATCATGCAGGCTTCTGAGTGAAATAGAATGATTT GAAACCACTACTGTATTGCCTGGATACACACACACACACACACACACACTTTATACAAAAATGTTAAAAGCAGGTTTCCTGGCATGTTCT AAACTGTTTTTTCTTTAGGAATAAATTACATTTATCTGCACAGATGTTGAAAATCCTGTTAAACCCTTGTCAAGGATTTGTTTATTTTAC >In-frame_ENST00000355860_ENST00000437989_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(amino acids)=237AA_start in transcript=100_stop in transcript=813 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRL AFTVDDNPTKPTTRQRYDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWIWARLSHL -------------------------------------------------------------- >In-frame_ENST00000355860_ENST00000562877_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(transcript)=746nt_BP=616nt GCCCCGACGCGCGCGGGTCTCGTTTGGAGCGGGAGTGAGTTCCTGAGCGAGTGGACCCGGCAGCGGGCGATAGGGGGGCCAGGTGCCTCC ACAGTCAGCCATGGCAGCGCTGCGCTACGCGGGGCTGGACGACACGGACAGTGAGGACGAGCTGCCTCCGGGCTGGGAGGAGAGAACCAC CAAGGACGGCTGGGTTTACTACGCCAATCACACCGAGGAGAAGACTCAGTGGGAACATCCAAAAACTGGAAAAAGAAAACGAGTGGCAGG AGATTTGCCATACGGATGGGAACAAGAAACTGATGAGAACGGACAAGTGTTTTTTGTTGACCATATAAATAAAAGAACCACCTACTTGGA CCCAAGACTGGCGTTTACTGTGGATGATAATCCGACCAAGCCAACCACCCGGCAAAGATACGACGGCAGCACCACTGCCATGGAAATTCT CCAGGGCCGGGATTTCACTGGCAAAGTGGTTGTGGTCACTGGAGCTAATTCAGGAATAGGGTTCGAAACCGCCAAGTCTTTTGCCCTCCA TGGTGCACATGTGATCTTGGCCTGCAGGAACATGGCAAGGGCGAGTGAAGCAGTGTCACGCATTTTAGAAGAATGGATTTGGGCCAGGCT TAGTCATCTATTGGTATGGATTTATCCAGGAGCTGGACTGCAACCGGGAAAGGGGCATCCTGCTCAAAGCCTGTTTCCCCACGAACATTG >In-frame_ENST00000355860_ENST00000562877_TCGA-06-5415-01A_WWOX_chr16_78198186_+_C15orf41_chr15_37100525_length(amino acids)=215AA_start in transcript=100_stop in transcript=744 MAALRYAGLDDTDSEDELPPGWEERTTKDGWVYYANHTEEKTQWEHPKTGKRKRVAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRL AFTVDDNPTKPTTRQRYDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWIWARLSHL -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for WWOX-C15orf41 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000355860 | + | 5 | 6 | 125_414 | 172.0 | 190.0 | MAPT |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000402655 | + | 1 | 5 | 125_414 | 0 | 312.0 | MAPT |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000406884 | + | 5 | 6 | 125_414 | 172.0 | 235.0 | MAPT |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000408984 | + | 5 | 10 | 125_414 | 172.0 | 311.6666666666667 | MAPT |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000566780 | + | 5 | 9 | 125_414 | 172.0 | 415.0 | MAPT |
Hgene | WWOX | chr16:78198186 | chr15:37100525 | ENST00000569818 | + | 1 | 1 | 125_414 | 0 | 37.0 | MAPT |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for WWOX-C15orf41 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for WWOX-C15orf41 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | WWOX | C0279626 | Squamous cell carcinoma of esophagus | 3 | CTD_human;ORPHANET |
Hgene | WWOX | C3280452 | SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 12 | 2 | GENOMICS_ENGLAND;ORPHANET;UNIPROT |
Hgene | WWOX | C4015519 | EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 28 | 2 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
Hgene | WWOX | C0002395 | Alzheimer's Disease | 1 | CTD_human |
Hgene | WWOX | C0006142 | Malignant neoplasm of breast | 1 | CTD_human |
Hgene | WWOX | C0007137 | Squamous cell carcinoma | 1 | CTD_human |
Hgene | WWOX | C0011265 | Presenile dementia | 1 | CTD_human |
Hgene | WWOX | C0024623 | Malignant neoplasm of stomach | 1 | CTD_human |
Hgene | WWOX | C0038356 | Stomach Neoplasms | 1 | CTD_human |
Hgene | WWOX | C0042076 | Urologic Neoplasms | 1 | CTD_human |
Hgene | WWOX | C0087031 | Juvenile-Onset Still Disease | 1 | CTD_human |
Hgene | WWOX | C0276496 | Familial Alzheimer Disease (FAD) | 1 | CTD_human |
Hgene | WWOX | C0494463 | Alzheimer Disease, Late Onset | 1 | CTD_human |
Hgene | WWOX | C0546126 | Acute Confusional Senile Dementia | 1 | CTD_human |
Hgene | WWOX | C0678222 | Breast Carcinoma | 1 | CTD_human |
Hgene | WWOX | C0750900 | Alzheimer's Disease, Focal Onset | 1 | CTD_human |
Hgene | WWOX | C0750901 | Alzheimer Disease, Early Onset | 1 | CTD_human |
Hgene | WWOX | C0751571 | Cancer of Urinary Tract | 1 | CTD_human |
Hgene | WWOX | C1257931 | Mammary Neoplasms, Human | 1 | CTD_human |
Hgene | WWOX | C1458155 | Mammary Neoplasms | 1 | CTD_human |
Hgene | WWOX | C1708349 | Hereditary Diffuse Gastric Cancer | 1 | CTD_human |
Hgene | WWOX | C3495559 | Juvenile arthritis | 1 | CTD_human |
Hgene | WWOX | C3714758 | Juvenile psoriatic arthritis | 1 | CTD_human |
Hgene | WWOX | C4510744 | 46,XY partial gonadal dysgenesis | 1 | ORPHANET |
Hgene | WWOX | C4552091 | Polyarthritis, Juvenile, Rheumatoid Factor Negative | 1 | CTD_human |
Hgene | WWOX | C4704862 | Polyarthritis, Juvenile, Rheumatoid Factor Positive | 1 | CTD_human |
Hgene | WWOX | C4704874 | Mammary Carcinoma, Human | 1 | CTD_human |
Tgene | C15orf41 | C3810185 | ANEMIA, CONGENITAL DYSERYTHROPOIETIC, TYPE Ib | 4 | GENOMICS_ENGLAND;UNIPROT |
Tgene | C15orf41 | C0002876 | Congenital dyserythropoietic anemia | 2 | CTD_human;GENOMICS_ENGLAND |
Tgene | C15orf41 | C0271933 | Congenital dyserythropoietic anemia, type I | 1 | CTD_human;ORPHANET |